Uses of Class
PamDetection.PamDetection

Packages that use PamDetection

Package	Description
clickDetector
clickDetector.offlineFuncs
clipgenerator
difar
likelihoodDetectionModule.thresholdDetector
loc3d_Thode
Localiser
Localiser.bearingLocaliser
Localiser.timeDelayLocalisers
PamDetection
RightWhaleEdgeDetector
rocca
seismicVeto
staticLocaliser
staticLocaliser.algorithms
staticLocaliser.mapping
staticLocaliser.offline
staticLocaliser.panels
targetMotionModule
targetMotionModule.offline
targetMotionModule.panels
targetMotionOld
targetMotionOld.dialog
whistleDetector
whistlesAndMoans
WorkshopDemo
xBatLogViewer

Uses of PamDetection in clickDetector

Subclasses of PamDetection in clickDetector

Modifier and Type	Class and Description
class	ClickDetection Class for Click Detector clicks.
class	ClickGroupDetection
class	ClickTrainDetection
class	TrackedClickGroup Class for handling data from manual tracking of clicks.
class	TriggerLevelDataUnit

Methods in clickDetector with parameters of type PamDetection

Modifier and Type	Method and Description
void	ClickDetection.addSuperDetection(PamDetection superDetection)
java.util.ArrayList<java.util.ArrayList<java.lang.Float>>	ConcatenatedSpectrogram.calcSpecData(PamDetection currentEvent, int chan) Calculate an 2D float ArrayList of all the click FFT data;
void	ClickDetection.removeSuperDetection(PamDetection superDetection)
static java.util.ArrayList<ClickDetection>	ClickDetectionMatch.sortEvents(java.util.ArrayList<ClickDetection> clicks, PamDetection currentEvent) Delete all clicks which are not the same event as the primary click.

Uses of PamDetection in clickDetector.offlineFuncs

Subclasses of PamDetection in clickDetector.offlineFuncs

Modifier and Type	Class and Description
class	OfflineEventDataUnit OfflineEventDataUnit replicates the RainbowClick functionality in OfflineRCEvent.

Method parameters in clickDetector.offlineFuncs with type arguments of type PamDetection

Modifier and Type	Method and Description
TargetMotionInformation	OfflineEventDataBlock.getTMInfo(java.util.ArrayList<PamDetection> detections)

Uses of PamDetection in clipgenerator

Subclasses of PamDetection in clipgenerator

Modifier and Type	Class and Description
class	ClipDataUnit
class	ClipSpectrogramMark

Uses of PamDetection in difar

Subclasses of PamDetection in difar

Modifier and Type	Class and Description
class	DifarDataUnit

Methods in difar that return PamDetection

Modifier and Type	Method and Description
PamDetection	DifarDataUnit.getParentDetection()

Methods in difar that return types with arguments of type PamDetection

Modifier and Type	Method and Description
java.util.ArrayList<PamDetection>	DIFARTargetMotionInformation.getCurrentDetections()

Methods in difar with parameters of type PamDetection

Modifier and Type	Method and Description
void	DifarProcess.difarTrigger(int channelMap, long signalStartMillis, long durationMillis, double[] f, PamDetection pamDetection, double displaySampleRate, java.lang.String triggerSpeciesName, java.lang.String triggerDataBlockName) Called when there is a trigger caused whether by a detection or by a mark being made on the spectrogram.
void	DifarDataUnit.setParentDetection(PamDetection parentDetection)

Constructors in difar with parameters of type PamDetection

Constructor and Description
DifarDataUnit(long clipStartMillis, long triggerMilliseconds, long startSample, int durationSamples, int channelMap, java.lang.String fileName, java.lang.String triggerName, double[][] rawData, long signalStartMillis, PamDetection parentDetection, double[] frequencyRange, float sourceSampleRate, float displaySampleRate) Constructor to use if storing data into the binary system.

Constructor parameters in difar with type arguments of type PamDetection

Constructor and Description
DIFARTargetMotionInformation(DifarProcess difarProcess, java.util.ArrayList<PamDetection> difarDataUnits)

Uses of PamDetection in likelihoodDetectionModule.thresholdDetector

Subclasses of PamDetection in likelihoodDetectionModule.thresholdDetector

Modifier and Type	Class and Description
class	ThresholdDetectorDataUnit This is the Threshold Detectors output data unit.

Uses of PamDetection in loc3d_Thode

Subclasses of PamDetection in loc3d_Thode

Modifier and Type	Class and Description
class	GroupDetDataUnit
class	TowedArray3DDataUnit

Constructors in loc3d_Thode with parameters of type PamDetection

Constructor and Description
TowedArray3DDataUnit(PamDetection parentDetection, int locContents, int referenceHydrophones, int Nstation, boolean hasAngle, boolean hasRange, boolean hasDepth)

Uses of PamDetection in Localiser

Methods in Localiser with parameters of type PamDetection

Modifier and Type	Method and Description
void	DisplayLocaliserMenu.addLocaliserMenuItem(javax.swing.JPopupMenu menu, PamDetection selectedDetion)

Uses of PamDetection in Localiser.bearingLocaliser

Classes in Localiser.bearingLocaliser with type parameters of type PamDetection

Modifier and Type	Class and Description
class	DetectionGrouper<t extends PamDetection>
class	GroupDetection<t extends PamDetection>

Subclasses of PamDetection in Localiser.bearingLocaliser

Modifier and Type	Class and Description
class	GroupDetection<t extends PamDetection>

Methods in Localiser.bearingLocaliser with parameters of type PamDetection

Modifier and Type	Method and Description
abstract boolean	DetectionGrouper.match(PamDetection currentData, PamDetection olderData)
abstract boolean	DetectionGrouper.match(PamDetection currentData, PamDetection olderData)

Uses of PamDetection in Localiser.timeDelayLocalisers

Methods in Localiser.timeDelayLocalisers with parameters of type PamDetection

Modifier and Type	Method and Description
void	DisplayLocaliserMenu.addLocaliserMenuItem(javax.swing.JPopupMenu menu, PamDetection selectedDetion)

Uses of PamDetection in PamDetection

Classes in PamDetection with type parameters of type PamDetection

Modifier and Type	Class and Description
class	PamDetection<T extends PamDetection,U extends PamDetection> Base class for all Pamguard detections.
class	PamDetection<T extends PamDetection,U extends PamDetection> Base class for all Pamguard detections.

Subclasses of PamDetection in PamDetection

Modifier and Type	Class and Description
class	IshAnchorGroup Brings together groups of IshDetWrappers
class	IshDetection Basic detection on a single channel for the Ishmael det/loc.
class	IshDetWrapper Groups togetehr a series of IshDeections.
class	IshTrack IshTrack may not need to hold any location information itself - it mainly holds a list of IshAnchorGroups, each of which has a PamLocation object, the contents of which will make up a track.
class	PamLocalisation Deprecated.

Fields in PamDetection with type parameters of type PamDetection

Modifier and Type	Field and Description
java.util.ArrayList<PamDetection>	TDArrayList.dataUnits A list of data units used to create the time delays.

Methods in PamDetection that return types with arguments of type PamDetection

Modifier and Type	Method and Description
java.util.ArrayList<PamDetection>	TDArrayList.getDataUnits()
static java.util.ArrayList<PamDetection>	AbstractDetectionMatch.getDetectionMap(java.util.ArrayList<TDArrayList<java.lang.Double>> timeDelayPossibility) Every time delay possibility corresponds to a set of detections, up to one for each channel.

Methods in PamDetection with parameters of type PamDetection

Modifier and Type	Method and Description
void	TDArrayList.addDataUnit(PamDetection unit)
void	AbstractDetectionMatch.setDetection(PamDetection parentDetection)
void	AbstractLocalisation.setParentDetection(PamDetection parentDetection)

Method parameters in PamDetection with type arguments of type PamDetection

Modifier and Type	Method and Description
void	TDArrayList.setDataUnits(java.util.ArrayList<PamDetection> dataUnits)

Uses of PamDetection in RightWhaleEdgeDetector

Subclasses of PamDetection in RightWhaleEdgeDetector

Modifier and Type	Class and Description
class	RWEDataUnit

Uses of PamDetection in rocca

Subclasses of PamDetection in rocca

Modifier and Type	Class and Description
class	RoccaContourDataUnit
class	RoccaDataUnit Rocca data unit code copied from WorkshopDataUnit.java
class	RoccaSightingDataUnit Container holding information about the current sighting, including pointers to the contours already measured

Uses of PamDetection in seismicVeto

Subclasses of PamDetection in seismicVeto

Modifier and Type	Class and Description
class	VetoDataUnit

Uses of PamDetection in staticLocaliser

Methods in staticLocaliser that return PamDetection

Modifier and Type	Method and Description
PamDetection	StaticLocalise.getPamDetection() Get the current PAM detection.

Methods in staticLocaliser that return types with arguments of type PamDetection

Modifier and Type	Method and Description
java.util.ArrayList<PamDetection>	SLResult.getDetectionMatchResults()

Methods in staticLocaliser with parameters of type PamDetection

Modifier and Type	Method and Description
void	TDManager.calcTimeDelays(PamDetection pamDetection, java.util.ArrayList<PamDataBlock> dataBlocks, java.lang.Integer detectionType) Calculate the detection match for a PamDetection and sets all the relevant fields in the class.
boolean	StaticLocaliserControl.canLocalise(PamDetection pamDetection) This is primarily used for batch analysis of data in offline mode or data in real time mode.
int	SLCSVLogging.SortByChannel.compare(PamDetection result1, PamDetection result2)
int	SLCSVLogging.SortByChannel.compare(PamDetection result1, PamDetection result2)
void	StaticLocalise.setPamDetection(PamDetection pamDetection) Sets the current PamDetection

Method parameters in staticLocaliser with type arguments of type PamDetection

Modifier and Type	Method and Description
void	SLResult.setDetectionMatchResults(java.util.ArrayList<PamDetection> detectionMatchResults)

Uses of PamDetection in staticLocaliser.algorithms

Methods in staticLocaliser.algorithms that return PamDetection

Modifier and Type	Method and Description
PamDetection	AbstractSLAlgorithm.getCurrentDetection()

Methods in staticLocaliser.algorithms with parameters of type PamDetection

Modifier and Type	Method and Description
void	AbstractSLAlgorithm.calcDetectionMatchTDs(PamDetection pamDetection, java.util.ArrayList<PamDataBlock> dataBlocks, java.lang.Integer detectionType) Calculate the detection match for a PamDetection.
void	AbstractSLAlgorithm.setCurrentDetection(PamDetection pamDetection)

Uses of PamDetection in staticLocaliser.mapping

Methods in staticLocaliser.mapping with parameters of type PamDetection

Modifier and Type	Method and Description
void	SLMapping.setLatLong(PamDetection detection, SLResult locResult) Geo-references a localisation result.

Uses of PamDetection in staticLocaliser.offline

Methods in staticLocaliser.offline with parameters of type PamDetection

Modifier and Type	Method and Description
boolean	FindDetectionNOfflineTask.processDataUnit(PamDetection pamDetection)
boolean	BatchLocaliseOfflineTask.processDataUnit(PamDetection pamDetection)

Uses of PamDetection in staticLocaliser.panels

Methods in staticLocaliser.panels that return PamDetection

Modifier and Type	Method and Description
PamDetection	WhistleLocaliserControl.getCurrentDetection()
PamDetection	LocaliserControlModel.getCurrentDetection()
PamDetection	ClickLocaliserControl.getCurrentDetection()
PamDetection	ClickEventLocaliserControl.getCurrentDetection()

Methods in staticLocaliser.panels that return types with arguments of type PamDetection

Modifier and Type	Method and Description
java.util.ArrayList<PamDetection>	WhistleLocaliserControl.getCurrentDetections()
java.util.ArrayList<PamDetection>	LocaliserControlModel.getCurrentDetections()
java.util.ArrayList<PamDetection>	ClickLocaliserControl.getCurrentDetections()
java.util.ArrayList<PamDetection>	ClickEventLocaliserControl.getCurrentDetections()

Methods in staticLocaliser.panels with parameters of type PamDetection

Modifier and Type	Method and Description
boolean	WhistleLocaliserControl.canLocalise(PamDetection pamDetection)
boolean	LocaliserControlModel.canLocalise(PamDetection pamDetection) Checks to see if this pamDetection can be localised.
boolean	ClickLocaliserControl.canLocalise(PamDetection pamDetection)
boolean	ClickEventLocaliserControl.canLocalise(PamDetection pamDetection)
void	LocalisationVisualisation.createPosVisualisation(PamDetection pamDetection) Creates a visualisation of all the possible time delays.
void	WhistleLocaliserControl.setCurrentDetection(PamDetection pamDetection)
void	TDVisualisation.setCurrentDetection(PamDetection pamDetection)
void	SLPanel.setCurrentDetection(PamDetection pamDetection) Set the current detection.
void	MapPanel3DSL.setCurrentDetection(PamDetection pamDetection)
void	LocResultsPanel.setCurrentDetection(PamDetection pamDetection)
void	LocQueuePanel.setCurrentDetection(PamDetection pamDetection)
void	LocalisationVisualisation.setCurrentDetection(PamDetection pamDetection)
void	LocalisationResultsGraph.setCurrentDetection(PamDetection pamDetection)
void	LocalisationInformation.setCurrentDetection(PamDetection pamDetection)
void	LocAlgorithmControl.setCurrentDetection(PamDetection pamDetection)
void	ClickLocaliserControl.setCurrentDetection(PamDetection pamDetection)
void	ClickEventLocaliserControl.setCurrentDetection(PamDetection pamDetection)

Uses of PamDetection in targetMotionModule

Classes in targetMotionModule with type parameters of type PamDetection

Modifier and Type	Class and Description
class	TargetMotionLocaliser<T extends PamDetection>

Methods in targetMotionModule that return types with arguments of type PamDetection

Modifier and Type	Method and Description
java.util.ArrayList<PamDetection>	TargetMotionInformation.getCurrentDetections() Returns the pamDetections which will be used for this target motion localisation.
java.util.ArrayList<PamDetection>	AbstractTargetMotionInformation.getCurrentDetections()
java.util.ArrayList<PamDetection>	EventRotator.getPamDetections()

Methods in targetMotionModule with parameters of type PamDetection

Modifier and Type	Method and Description
void	TargetMotionControl.addLocaliserMenuItem(javax.swing.JPopupMenu menu, PamDetection selectedDetion)

Method parameters in targetMotionModule with type arguments of type PamDetection

Modifier and Type	Method and Description
void	TargetMotionControl.calcTMDetectionInfo(java.util.ArrayList<PamDetection> currentDetections, TargetMotionLocaliserProvider dataBlock) Calculates the targetMotiojnInfo for a set of detections.
static java.util.ArrayList<java.lang.Integer>	AbstractTargetMotionInformation.checkStreamers(java.util.ArrayList<PamDetection> currentDetections) Check which streamer we have in the group of detections
void	TMManager.executeTMThread(java.util.ArrayList<PamDetection> currentDetections, TargetMotionLocaliserProvider dataBlock, boolean calcStreamer)
TargetMotionInformation	TargetMotionLocaliserProvider.getTMInfo(java.util.ArrayList<PamDetection> detections) Each data block may have a unique way of calculating targetmotion information.

Constructor parameters in targetMotionModule with type arguments of type PamDetection

Constructor and Description
AbstractTargetMotionInformation(java.util.ArrayList<PamDetection> detections, PamDataBlock pamDataBlock)
EventRotator(java.util.ArrayList<PamDetection> pamDetections, PamDataBlock pamDataBlock)

Uses of PamDetection in targetMotionModule.offline

Methods in targetMotionModule.offline with parameters of type PamDetection

Modifier and Type	Method and Description
boolean	BatchTMLocalisation.processDataUnit(PamDetection dataUnit)

Uses of PamDetection in targetMotionModule.panels

Classes in targetMotionModule.panels with type parameters of type PamDetection

Modifier and Type	Class and Description
class	MapPanel<T extends PamDetection>
class	MapPanel2D<T extends PamDetection>
class	MapPanel3D<T extends PamDetection>
class	TargetMotionMainPanel<T extends PamDetection>

Methods in targetMotionModule.panels that return types with arguments of type PamDetection

Modifier and Type	Method and Description
java.util.ArrayList<PamDetection>	EventControlPanel.getCurrentDetections()
java.util.ArrayList<PamDetection>	TargetMotionControlPanel.getTargetMotionInfo()
java.util.ArrayList<PamDetection>	EventControlPanel.getTargetMotionInfo()

Methods in targetMotionModule.panels with parameters of type PamDetection

Modifier and Type	Method and Description
void	TargetMotionControlPanel.addLocaliserMenuItem(javax.swing.JPopupMenu menu, PamDetection selectedDetion)
void	EventControlPanel.addLocaliserMenuItem(javax.swing.JPopupMenu menu, PamDetection selectedDetection) If we want to add a menu item to pop menu in another module then we need to check we can localise the detection, if so then add an option to the menu to localise the selected detection.
boolean	TargetMotionControlPanel.canLocalise(PamDetection dataUnit) Used primarily for offline processing.
boolean	EventControlPanel.canLocalise(PamDetection dataUnit)

Uses of PamDetection in targetMotionOld

Classes in targetMotionOld with type parameters of type PamDetection

Modifier and Type	Class and Description
class	AbstractTargetMotionModel<T extends PamDetection> Reinstated Target motion add-in as used by the click detector.
class	AbstractTimeDelayLocaliser<T extends PamDetection> Reinstated Target motion add-in as used by the click detector.
class	LeastSquares<T extends PamDetection> Least squares localisation for Target motion analysis.
class	MarkovChain<T extends PamDetection> this is a specific MCMC localiser designed to produce a probability distribution of the likely location of a cetecean using TARGET MOTION TECHNIQUES only.
class	Simplex2D<T extends PamDetection> Reinstated Target motion add-in as used by the click detector.
class	Simplex3D<T extends PamDetection> Reinstated Target motion add-in as used by the click detector.
class	TargetMotionLocaliser<T extends PamDetection> Reinstated Target motion add-in as used by the click detector.
interface	TargetMotionModel<T extends PamDetection> Reinstated Target motion add-in as used by the click detector.

Methods in targetMotionOld that return PamDetection

Modifier and Type	Method and Description
PamDetection	EventRotator.getPamDetection()

Methods in targetMotionOld with parameters of type PamDetection

Modifier and Type	Method and Description
void	AbstractTimeDelayLocaliser.getEventInfo(PamDetection pamDetection) Get info for the event attached to the pamDetection
void	AbstractTimeDelayLocaliser.setEventRotator(PamDetection pamDetection)

Constructors in targetMotionOld with parameters of type PamDetection

Constructor and Description
EventRotator(PamDetection pamDetection)

Uses of PamDetection in targetMotionOld.dialog

Classes in targetMotionOld.dialog with type parameters of type PamDetection

Modifier and Type	Class and Description
class	DialogMap<T extends PamDetection>
class	DialogMap2D<T extends PamDetection> Reinstated Target motion add-in as used by the click detector.
class	DialogMap3D<T extends PamDetection> Reinstated Target motion add-in as used by the click detector.
class	EventControlPanel<T extends PamDetection> Reinstated Target motion add-in as used by the click detector.
class	TargetMotionDialog<T extends PamDetection> Reinstated Target motion add-in as used by the click detector.

Uses of PamDetection in whistleDetector

Subclasses of PamDetection in whistleDetector

Modifier and Type	Class and Description
class	EventDataUnit
class	PeakDataUnit WhistlePeakUnits contain information from a single FFT slice.
class	ShapeDataUnit Example class to go with WslPeak to show how WslPeaks, WslShapes and WslEvents all go together.
class	WhistleGroupDetection Whistle group detection is initially designed to take just one whistle from each of many hydrophone pairs.

Uses of PamDetection in whistlesAndMoans

Subclasses of PamDetection in whistlesAndMoans

Modifier and Type	Class and Description
class	AbstractWhistleDataUnit
class	ConnectedRegionDataUnit
class	WhistleToneGroupedDetection

Methods in whistlesAndMoans with parameters of type PamDetection

Modifier and Type	Method and Description
boolean	WhistleDetectionGrouper.match(PamDetection currentData, PamDetection olderData)
boolean	WhistleDetectionGrouper.match(PamDetection currentData, PamDetection olderData)

Uses of PamDetection in WorkshopDemo

Subclasses of PamDetection in WorkshopDemo

Modifier and Type	Class and Description
class	WorkshopDataUnit

Uses of PamDetection in xBatLogViewer

Subclasses of PamDetection in xBatLogViewer

Modifier and Type	Class and Description
class	XBatLogDataUnit