A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

S

sample - Variable in class likelihoodDetectionModule.thresholdDetector.CurvePeakTracker
 
sampleCounts - Variable in class decimator.DecimatorProcess
 
sampleItem - Variable in class IshmaelDetector.IshLogger
 
sampleMode - Variable in class nidaqdev.Nidaq.DAQmxCfgSampClkTimingParams
 
sampleNoise - Variable in class clickDetector.ClickParameters
 
sampleNoise - Variable in class clickDetector.dialogs.ClickParamsDialog.NoisePanel
 
sampleOffset - Variable in class clickDetector.RainbowFile
 
samplePanel - Variable in class PamView.PamSymbolDialog
 
sampleRate - Variable in class Acquisition.AcquisitionCParameters
 
sampleRate - Variable in class Acquisition.AcquisitionDialog
 
sampleRate - Variable in class Acquisition.AcquisitionLogging
 
sampleRate - Variable in class Acquisition.AcquisitionParameters
 
sampleRate - Variable in class Acquisition.DaqStatusDataUnit
 
sampleRate - Variable in class Acquisition.FileInputSystem
 
sampleRate - Variable in class Acquisition.WavHeader
 
sampleRate - Variable in class asiojni.AsioJniInterface.AsioDriverSettings
 
sampleRate - Variable in class clickDetector.ClickBTDisplay
 
sampleRate - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierWorker
 
sampleRate - Variable in class clickDetector.ClickClassifiers.basicSweep.ZeroCrossingStats
 
sampleRate - Variable in class clickDetector.ClickClassifiers.ClickTypesDialog
 
sampleRate - Variable in class clickDetector.ClickSpectrogramPlugin.BTDisplayPanel
 
sampleRate - Variable in class clickDetector.ClickTabPanel
 
sampleRate - Variable in class clickDetector.RainbowFile
 
sampleRate - Variable in class decimator.DecimatorParamsDialog
 
sampleRate - Variable in class Filters.FilterDialog
 
sampleRate - Variable in class Filters.FilterMethod
 
sampleRate - Variable in class Filters.IirfFilter
 
sampleRate - Variable in class IshmaelDetector.IshDetGraphics.IshDisplayPanel
 
sampleRate - Variable in class IshmaelDetector.IshDetSave
 
sampleRate - Variable in class IshmaelLocator.IshLocGraphics.IshDisplayPanel
 
sampleRate - Variable in class likelihoodDetectionModule.spectralEti.SpectralBand
 
sampleRate - Variable in class noiseMonitor.ResolutionPanel
 
sampleRate - Variable in class PamguardMVC.PamProcess
 
sampleRate - Variable in class PamguardMVC.RawDataDisplay.RawDisplayPanel
Implementation of PamObserver
sampleRate - Variable in class simulatedAcquisition.RandomWhistles
 
sampleRate - Variable in class soundPlayback.FilePlaybackDialogComponent
 
sampleRate - Variable in class SoundRecorder.PamAudioFileStorage
 
sampleRate - Variable in class SoundRecorder.RecordingInfo
 
sampleRate - Variable in class Spectrogram.NormalisedAudioData
 
sampleRate - Variable in class Spectrogram.SpectrogramDisplay
 
sampleRate - Variable in class Spectrogram.SpectrogramParamsDialog
 
sampleRate - Variable in class wavFiles.WavHeader
 
sampleRate - Variable in class whistleClassifier.BasicFragmentStore
 
sampleRate - Variable in class whistleClassifier.FragmentClassifierParams
 
sampleRate - Variable in class whistleClassifier.training.TrainingDataSet
 
sampleRate - Variable in class whistleClassifier.TrainingDataSet
 
sampleRate - Variable in class whistleDetector.WhistleParametersDialog
 
sampleRateData - Variable in class Spectrogram.SpectrogramParamsDialog
 
sampleRateInfo - Variable in class asiojni.AsioDriverInfo
 
sampleSizeInBytes - Variable in class Acquisition.SoundCardSystem
 
sampleSizeInBytes - Variable in class asiojni.ASIOSoundSystem
 
samplesPerChannel - Variable in class nidaqdev.Nidaq.DaqConfig
 
samplesPerChannel - Variable in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
samplesPerStore - Variable in class clickDetector.ClickDetector
 
samplesProcessed - Variable in class clickDetector.ClickDetector.ChannelGroupDetector
 
sampleStartTime - Variable in class SoundRecorder.RecorderProcess
 
SamplingPanel() - Method in class Acquisition.AcquisitionDialog
 
samplingRateHz - Variable in class likelihoodDetectionModule.AcquisitionSettings
The sampling rate of the audio data.
sampsPerChanRead - Variable in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
sampsPerChanToAcquire - Variable in class nidaqdev.Nidaq.DAQmxCfgSampClkTimingParams
 
save - Variable in class whistleClassifier.training.ClassifierTrainingDialog.RunTrainingPanel
 
SAVE_DATABASE - Static variable in class PamController.PamSettingManager
Save settings to database tables (if available).
SAVE_PSF - Static variable in class PamController.PamSettingManager
Save settings to a psf file
saveAllClicksToDB - Variable in class clickDetector.ClickParameters
 
saveAllSettings() - Method in class generalDatabase.LogSettings
 
saveArrayToFile(PamArray) - Static method in class Array.ArrayManager
 
saveClassifierParams(Frame, FragmentClassifierParams) - Method in class whistleClassifier.WhistleClassifierControl
Save a set of classifier params.
saveClicks() - Method in interface clickDetector.offlineFuncs.OfflineStore
Save any clicks in memory which indicate that they need saving
saveContour(RoccaContourDataBlock) - Method in class rocca.RoccaProcess
 
saveContourStats(RoccaContourDataBlock) - Method in class rocca.RoccaProcess
 
saveData(PamDataBlock) - Method in class Acquisition.AcquisitionControl
 
saveData(PamDataBlock) - Method in class Acquisition.offlineFuncs.OfflineFileServer
 
saveData(PamDataUnit) - Method in class AIS.AISBinaryDataSource
 
saveData(PamDataUnit) - Method in class binaryFileStorage.BinaryDataSource
Save data into the binary stream
saveData(PamDataBlock) - Method in class binaryFileStorage.BinaryStore
Saves data in a PamDataBlock.
saveData(File, PamDataBlock) - Method in class binaryFileStorage.BinaryStore
Rewrite a specific file using data from pamDataBlock.
saveData(PamDataUnit) - Method in class clickDetector.ClickBinaryDataSource
 
saveData(ClickDetection) - Method in class clickDetector.ClickBinaryDataSource
Save a click to the binary data store
saveData(PamDataBlock) - Method in class generalDatabase.DBControlUnit
 
saveData() - Method in class IshmaelDetector.IshDetSave
 
saveData(PamDataUnit) - Method in class noiseMonitor.NoiseBinaryDataSource
 
saveData(PamDataBlock) - Method in interface PamController.OfflineDataStore
Save data previously loaded from the store during offline viewing.
saveData(PamDataUnit) - Method in class whistlesAndMoans.WhistleBinaryDataSource
 
saveDatabaseFileData() - Method in class PamController.PamSettingManager
Save the details of the most recently used database.
savedFftLength - Variable in class IshmaelDetector.IshPeakProcess
 
savedGramHeight - Variable in class IshmaelDetector.EnergySumProcess
 
savedGramHeight - Variable in class IshmaelDetector.SgramCorrProcess
 
saveFinalSettings() - Method in class PamController.PamSettingManager
Call just before PAMGUARD exits to save the settings either to psf and / or database tables.
saveOfflineData(DBControlUnit, Connection) - Method in class clickDetector.offlineFuncs.OfflineEventLogging
 
saveOfflineData(DBControlUnit, Connection) - Method in class generalDatabase.SQLLogging
Save offline data in viewer mode.
saveportId - Static variable in class serialComms.SerialPortCom
 
SaveRequirements - Class in PamguardMVC
Class which can tell a data store what type of work is needed to re-save the data.
SaveRequirements(PamDataBlock) - Constructor for class PamguardMVC.SaveRequirements
 
saveSettings(long) - Method in class PamController.PamController
Gets called in pamStart and may / will attempt to store all PAMGUARD settings via the database and binary storage modules.
saveSettings(int) - Method in class PamController.PamSettingManager
Save settings to a psf file and / or the database tables.
saveSettings(JFrame) - Method in class PamController.PamSettingManager
saves settings in the current file
saveSettings() - Method in class whistleClassifier.training.ClassifierTrainingDialog
An export function which saves the classifier settings separately from the main PAMGUARD settings file data.
saveSettingsAs(JFrame) - Method in class PamController.PamSettingManager
Save settings to a new psf file.
saveSettingsFileData() - Method in class PamController.PamSettingManager
Save the list of recently used settings files.
saveSettingsToDatabase() - Method in class PamController.PamSettingManager
See if there is a database module in PAMGUARD and if so, save the settings in serialised from in the Pamguard_Settings and Pamguard_Settings_Last tables.
saveSettingsToDB() - Method in class generalDatabase.DBControl
 
saveSettingsToDB() - Method in class generalDatabase.DBProcess
Called from the settings manager whenever settings would normally be saved to file.
saveSettingsToFile() - Method in class PamController.PamSettingManager
Save settings to the default (most recently used) psf file.
saveStartSettings(long) - Method in class binaryFileStorage.BinarySettingsStorage
Save the settings in some vaguely sensible format.
saveStartSettings(long) - Method in class binaryFileStorage.BinaryStore
 
saveStartSettings(long) - Method in class generalDatabase.DBControl
 
saveStartSettings() - Method in class generalDatabase.DBProcess
 
saveStartSettings(long) - Method in interface PamController.PamSettingsSource
Save the settings in some way or another.
saveToDatabase - Variable in class clickDetector.dialogs.ClickStorageOptionsDialog
 
saveUnit(long, PamControlledUnit) - Method in class generalDatabase.LogModules
 
saveViewerData() - Method in class clickDetector.ClickDataBlock
 
saveViewerData() - Method in class clickDetector.offlineFuncs.OfflineClickLogging
 
saveViewerData() - Method in class clickDetector.offlineFuncs.OfflineEventDataBlock
 
saveViewerData() - Method in class PamController.PamControlledUnit
Save data (to binary files and to database) in viewer mode.
saveViewerData() - Method in class PamController.PamController
Go through all data blocks in all modules and tell them to save.
saveViewerData() - Method in class PamguardMVC.PamDataBlock
Saves data in this data block in offline viewer mode.
saveViewerData() - Method in class PamguardMVC.PamProcess
Save data (to binary files and to database) in viewer mode.
sayBibolarRange(int) - Static method in class mcc.MccJniInterface
 
sayCursorInfo(Point) - Method in class clickDetector.ClickBTDisplay
 
sayData() - Method in class Array.HydrophoneDialogPanel.StaticPositionPanel
 
sayData() - Method in class Array.HydrophoneDialogPanel.StaticTowedPanel
 
sayEta() - Method in class Acquisition.FileInputSystem
 
sayEta(long) - Method in class Acquisition.FileInputSystem
 
sayFilter() - Method in class Filters.IirfFilter
 
sayFormattedValue(double) - Method in class PamUtils.LatLongDialogStrip
 
sayFragment(int, ConnectedRegion) - Method in class whistlesAndMoans.FragmentingFragmenter
Dump information on a single fragment ot screen.
sayFragments() - Method in class whistlesAndMoans.FragmentingFragmenter
Dump information to screen.
sayHorizonInfo() - Method in class videoRangePanel.ImageAnglePanel
 
sayHScale() - Method in class dataMap.ScalePanel
 
sayLatLong() - Method in class Array.HydrophoneDialogPanel.StaticPositionPanel
 
sayMemory() - Method in class PamController.PamController
 
sayMouseData(Integer, Integer) - Method in class noiseMonitor.NoiseTabPanel
 
sayMousePos(Point) - Method in class Spectrogram.SpectrogramDisplay.SpectrogramPanel
 
sayPair() - Method in class Filters.IirfFilter.FilterNotPair
 
sayPair() - Method in class Filters.IirfFilter.FilterPair
 
sayPair() - Method in class Filters.IirfFilter.FilterUnit
 
sayPassData() - Method in class angleVetoes.AngleVetoDisplay
 
sayProgress(String) - Method in class whistleClassifier.training.ClassifierTrainingDialog.ProgressPanel
 
sayRecorderStatus() - Method in class SoundRecorder.RecorderControl
 
sayRegion() - Method in class whistlesAndMoans.ConnectedRegion
 
sayRegion() - Method in class whitesWhistleDetector.ConnectedRegion
 
saySampleRate() - Method in class soundPlayback.FilePlaybackDialogComponent
 
sayServerStatus() - Method in class generalDatabase.MySQLDialogPanel
 
sayShoreInfo() - Method in class videoRangePanel.ImageAnglePanel
 
sayStartDate(long) - Method in class pamScrollSystem.LoadOptionsDialog
Write the current start date into the dialog.
sayStartTime(long) - Method in class noiseMonitor.NoiseTabPanel
 
sayStatus() - Method in class beakedWhaleProtocol.BeakedSidePanel
 
sayStatus(String) - Method in class SoundRecorder.RecorderSidePanel
 
sayStatus(String) - Method in class SoundRecorder.RecorderTabPanel
 
sayStatus(String) - Method in interface SoundRecorder.RecorderView
 
sayStatusTime() - Method in class listening.ThingHeardTabPanelControl.EffortPanel
 
sayString(char[]) - Static method in class nidaqdev.Nidaq
 
sayTimes() - Method in class pamScrollSystem.PamScroller
 
sayTimes(String) - Method in class PamView.ViewTimesDialog
 
sayValue(double) - Method in class PamUtils.LatLongDialogStrip
Set data in the lat long dialog strip
sayValue(double, boolean) - Method in class PamUtils.LatLongDialogStrip
 
sayWarning(String, boolean) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
sc - Variable in class whistleClassifier.WhistleClassificationDialog.SpeciesPanel
 
scale - Variable in class GPS.ShipDimensionsDrawing
 
scale - Variable in class PamguardMVC.RawDataDisplay.RawDisplayPanel
do the drawing here to avoid problems with datablocks not all arriving at same time.
SCALE_LIN - Static variable in class Filters.FilterParams
 
SCALE_LOG - Static variable in class Filters.FilterParams
 
SCALE_NONE - Static variable in class dataMap.OfflineDataMap
Vertical scaling - scale each Map data point to a data rate, or don't bother scaling at all.
SCALE_NONE - Static variable in class PamguardMVC.OfflineDataMap
Vertical scaling - scale each Map data point to a data rate, or don't bother scaling at all.
SCALE_PERDAY - Static variable in class dataMap.OfflineDataMap
 
SCALE_PERDAY - Static variable in class PamguardMVC.OfflineDataMap
 
SCALE_PERHOUR - Static variable in class dataMap.OfflineDataMap
 
SCALE_PERHOUR - Static variable in class PamguardMVC.OfflineDataMap
 
SCALE_PERMINUTE - Static variable in class dataMap.OfflineDataMap
 
SCALE_PERMINUTE - Static variable in class PamguardMVC.OfflineDataMap
 
SCALE_PERSECOND - Static variable in class dataMap.OfflineDataMap
 
SCALE_PERSECOND - Static variable in class PamguardMVC.OfflineDataMap
 
scaleA - Variable in class depthReadout.MccDepthParameters.MccSensorParameters
Deth = scaleA * voltage + scaleB;
scaleA - Variable in class depthReadout.MccDialog.SensorPanel
 
scaleB - Variable in class depthReadout.MccDepthParameters.MccSensorParameters
 
scaleB - Variable in class depthReadout.MccDialog.SensorPanel
 
scaleChange() - Method in class dataMap.ScrollingDataPanel
 
scaleChanged() - Method in class dataMap.DataMapPanel
Called from ScalePanel when anything to do with scaling changes.
scaleData(double, long, int) - Static method in class dataMap.OfflineDataMap
 
scaleData(double, long, int) - Static method in class PamguardMVC.OfflineDataMap
 
scaleData(double) - Method in class pamMaths.PamHistogram
Scale the data in the histogram by the given factor
scaledImage - Variable in class videoRangePanel.VRPanel
 
scaleEnds - Variable in class Layout.PamAxis
 
scaleList - Variable in class videoRangePanel.VRParametersDialog.ImagePanel
 
scaleMax - Variable in class clickDetector.ClickTrigger
 
scaleMax - Variable in class clickDetector.TriggerFunctionDisplay.TriggerFunctionDisplayPanel
 
scaleMenuItem - Variable in class fftManager.FFTPluginPanelProvider.FFTPluginPanel
 
scaleMin - Variable in class clickDetector.ClickTrigger
 
scaleMin - Variable in class clickDetector.TriggerFunctionDisplay.TriggerFunctionDisplayPanel
 
scaleNames - Static variable in class videoRangePanel.VRParameters
 
scalePanel - Variable in class dataMap.DataMapPanel
 
ScalePanel - Class in dataMap
 
ScalePanel(DataMapControl, DataMapPanel) - Constructor for class dataMap.ScalePanel
 
scalePanel - Variable in class radardisplay.RadarParametersDialog
 
ScalePanel - Class in Spectrogram
 
ScalePanel(Image) - Constructor for class Spectrogram.ScalePanel
 
ScalePanel.HScrollListener - Class in dataMap
 
ScalePanel.HScrollListener() - Constructor for class dataMap.ScalePanel.HScrollListener
 
ScalePanel.LogScaleListener - Class in dataMap
 
ScalePanel.LogScaleListener() - Constructor for class dataMap.ScalePanel.LogScaleListener
 
ScalePanel.VerticalListener - Class in dataMap
 
ScalePanel.VerticalListener() - Constructor for class dataMap.ScalePanel.VerticalListener
 
scaleStoreData(double) - Method in class whistleClassifier.BasicFragmentStore
 
scaleStoreData(double) - Method in interface whistleClassifier.FragmentStore
 
scaleStyle - Variable in class videoRangePanel.VRSidePanel.VRPanel
 
scaleType - Variable in class Filters.FilterParams
Scale type just used for drawing dialog
scaleWidthfactor - Variable in class Spectrogram.ScalePanel
 
scaleX - Variable in class Spectrogram.ScalePanel
 
scaleX - Variable in class Spectrogram.SpectrogramDisplay
 
scaleY - Variable in class Spectrogram.ScalePanel
 
scaleY - Variable in class Spectrogram.SpectrogramDisplay
 
scheduleTask(Runnable) - Method in class PamController.AWTScheduler
Schedules a task for execution.
schemaName - Variable in class generalDatabase.MySQLSystem
 
score - Variable in class loc3d_Thode.GroupDetDataUnit
 
screenDimension - Static variable in class PamView.ScreenSize
 
screenEndMillis - Variable in class dataMap.ScrollingDataPanel
 
screenLowerRight - Variable in class Map.MapContourGraphics
 
screenSeconds - Variable in class dataMap.ScrollingDataPanel
 
ScreenSize - Class in PamView
Class to launch a thread which will get the screen size (inlcuding the bounds of multiple monitors)
ScreenSize() - Constructor for class PamView.ScreenSize
 
ScreenSize.GetBounds - Class in PamView
Thread to obtain the screen bounds.
ScreenSize.GetBounds() - Constructor for class PamView.ScreenSize.GetBounds
 
screenStartMillis - Variable in class dataMap.ScrollingDataPanel
 
screenToImage(Point) - Method in class videoRangePanel.VRPanel
 
screenUpperLeft - Variable in class Map.MapContourGraphics
 
screenXYnew - Variable in class Map.MapContourGraphics
 
screenXYold - Variable in class Map.MapContourGraphics
 
SCROLLABLE - Static variable in class generalDatabase.pamCursor.PamCursorManager
The underlying database does support updateable cursors, so most functionality can be simply passed straight through to the underlying database.
ScrollableBufferedImage - Class in PamView
 
ScrollableBufferedImage(int, int, int) - Constructor for class PamView.ScrollableBufferedImage
 
scrollableCursor - Variable in class generalDatabase.pamCursor.ScrollablePamCursor
 
ScrollablePamCursor - Class in generalDatabase.pamCursor
 
ScrollablePamCursor(EmptyTableDefinition) - Constructor for class generalDatabase.pamCursor.ScrollablePamCursor
 
scrollBar - Variable in class pamScrollSystem.PamScroller
 
scrollChanged() - Method in class dataMap.DataStreamPanel
 
scrollChanged() - Method in class dataMap.SettingsStrip
 
scrollChecks - Variable in class clickDetector.ClickBTDisplay
 
scrolledPanel - Variable in class dataMap.ScrollingDataPanel
Scrolled panel which will contain the actual DataStreamPanels
scroller - Variable in class UserInput.UserInputPanel
 
scrollerCoupling - Variable in class pamScrollSystem.AbstractPamScroller
 
ScrollerCoupling - Class in pamScrollSystem
A class for coupling two or more scrollers.
ScrollerCoupling(String) - Constructor for class pamScrollSystem.ScrollerCoupling
 
scrollerCouplings - Variable in class pamScrollSystem.AbstractScrollManager
 
scrollerData - Variable in class pamScrollSystem.AbstractPamScroller
 
scrollerData - Variable in class pamScrollSystem.LoadOptionsDialog
 
scrollerData - Variable in class pamScrollSystem.StoredScrollerData
 
scrollers - Variable in class pamScrollSystem.ScrollerCoupling
 
scrollImage(int, int, boolean) - Method in class PamView.JBufferedPanel
 
scrollImage(int, int) - Method in class PamView.ScrollableBufferedImage
 
scrollingDataPanel - Variable in class dataMap.DataMapLayout
 
scrollingDataPanel - Variable in class dataMap.DataMapPanel
 
scrollingDataPanel - Variable in class dataMap.DataStreamPanel
 
ScrollingDataPanel - Class in dataMap
 
ScrollingDataPanel(DataMapControl, DataMapPanel) - Constructor for class dataMap.ScrollingDataPanel
 
scrollingDataPanel - Variable in class dataMap.SettingsStrip
 
ScrollingDataPanel.HScrollListener - Class in dataMap
 
ScrollingDataPanel.HScrollListener() - Constructor for class dataMap.ScrollingDataPanel.HScrollListener
 
scrollingSidePanel - Variable in class PamView.PamGui
 
scrollManager - Variable in class pamScrollSystem.AbstractPamScroller
reference to the global scroll manager.
scrollManager - Variable in class pamScrollSystem.LoadOptionsDialog
 
scrollMoved() - Method in class pamScrollSystem.PamScroller
 
scrollMoved() - Method in class pamScrollSystem.PamScrollSlider
 
scrollPane - Variable in class noiseMonitor.NoiseTabPanel.DataSelectionPanel
 
scrollPane - Variable in class pamScrollSystem.ScrollPaneAddon
 
scrollPane - Variable in class PamView.DBTextArea
 
scrollPane - Variable in class videoRangePanel.VRPanel
 
scrollPane - Variable in class whistleClassifier.ClassifierTrainingDialog.DataViewPanel
 
scrollPane - Variable in class whistleClassifier.training.ClassifierTrainingDialog.DataViewPanel
 
scrollPane - Variable in class whistleClassifier.training.ClassifierTrainingDialog.RunTrainingPanel
 
ScrollPaneAddon - Class in pamScrollSystem
 
ScrollPaneAddon(JScrollPane, String, int, int, long, boolean) - Constructor for class pamScrollSystem.ScrollPaneAddon
 
ScrollPaneAddon.DummyScrollBar - Class in pamScrollSystem
 
ScrollPaneAddon.DummyScrollBar() - Constructor for class pamScrollSystem.ScrollPaneAddon.DummyScrollBar
 
scrollPanel - Variable in class PamView.PamObjectViewer
 
scrollPanelContainer - Variable in class dataMap.ScrollingDataPanel
 
scrollRangeChanged(AbstractPamScroller) - Method in class clickDetector.ClickBTDisplay.HScrollObserver
 
scrollRangeChanged(AbstractPamScroller) - Method in class clickDetector.ClickBTDisplay.OfflineScrollManager
 
scrollRangeChanged(AbstractPamScroller) - Method in class clickDetector.ClickBTDisplay.RealTimeScrollManager
 
scrollRangeChanged(AbstractPamScroller) - Method in class listening.ThingHeardTabPanelControl.ScrollObserver
 
scrollRangeChanged(AbstractPamScroller) - Method in class Map.SimpleMap
 
scrollRangeChanged(AbstractPamScroller) - Method in class noiseMonitor.NoiseTabPanel.TimeRangeListener
 
scrollRangeChanged(AbstractPamScroller) - Method in interface pamScrollSystem.PamScrollObserver
Notification sent when a scroller or slider changes it's data range
scrollRangeChanged(AbstractPamScroller) - Method in class pamScrollSystem.RangeSpinner
 
scrollRangeChanged(AbstractPamScroller) - Method in class Spectrogram.SpectrogramDisplay.ViewScrollObserver
 
scrollRangeChanged(AbstractPamScroller) - Method in class whistleClassifier.ClassifierHistoryWindow.ScrollObserver
 
scrollToData(PamDataBlock) - Method in class dataMap.DataMapControl
 
scrollToData(PamDataBlock) - Method in class dataMap.ScrollingDataPanel
 
scrollToEnd() - Method in class whistleClassifier.training.ClassifierTrainingDialog.RunTrainingPanel
 
scrollToValue(int) - Method in class clickDetector.ClickBTDisplay.AmplitudeScaleManager
 
scrollToValue(int) - Method in class clickDetector.ClickBTDisplay.BearingScaleManager
 
scrollToValue(int) - Method in class clickDetector.ClickBTDisplay.ICIScaleManager
 
scrollToValue(int) - Method in class clickDetector.ClickBTDisplay.VScaleManager
Convert a scroll bar position back into avalue.
scrollValueChanged(AbstractPamScroller) - Method in class clickDetector.ClickBTDisplay.HScrollObserver
 
scrollValueChanged(AbstractPamScroller) - Method in class clickDetector.ClickBTDisplay.OfflineScrollManager
 
scrollValueChanged(AbstractPamScroller) - Method in class clickDetector.ClickBTDisplay.RealTimeScrollManager
 
scrollValueChanged(AbstractPamScroller) - Method in class listening.ThingHeardTabPanelControl.ScrollObserver
 
scrollValueChanged(AbstractPamScroller) - Method in class Map.SimpleMap
 
scrollValueChanged(AbstractPamScroller) - Method in class noiseMonitor.NoiseTabPanel.TimeRangeListener
 
scrollValueChanged(AbstractPamScroller) - Method in interface pamScrollSystem.PamScrollObserver
Notification sent when a scroller or slider changes it's position
scrollValueChanged(AbstractPamScroller) - Method in class pamScrollSystem.RangeSpinner
 
scrollValueChanged(AbstractPamScroller) - Method in class Spectrogram.SpectrogramDisplay.ViewScrollObserver
 
scrollValueChanged(AbstractPamScroller) - Method in class whistleClassifier.ClassifierHistoryWindow.ScrollObserver
 
search - Variable in class PamView.PamHelp
 
search4x - Variable in class whistlesAndMoans.WhistleToneConnectProcess.ShapeConnector
 
search4x - Variable in class whitesWhistleDetector.WhitesConnectProcess.ShapeConnector
 
search4y - Variable in class whistlesAndMoans.WhistleToneConnectProcess.ShapeConnector
 
search4y - Variable in class whitesWhistleDetector.WhitesConnectProcess.ShapeConnector
 
search8x - Variable in class whistlesAndMoans.WhistleToneConnectProcess.ShapeConnector
 
search8x - Variable in class whitesWhistleDetector.WhitesConnectProcess.ShapeConnector
 
search8y - Variable in class whistlesAndMoans.WhistleToneConnectProcess.ShapeConnector
 
search8y - Variable in class whitesWhistleDetector.WhitesConnectProcess.ShapeConnector
 
searchBin0 - Variable in class whistleDetector.PeakDetector
 
searchBin1 - Variable in class whistleDetector.PeakDetector
 
searchBin1 - Variable in class whistlesAndMoans.WhistleToneConnectProcess.ShapeConnector
 
searchBin2 - Variable in class whistlesAndMoans.WhistleToneConnectProcess.ShapeConnector
 
searchEndButton - Variable in class whistleDetector.WhistleParametersDialog.PeakPanel
 
searchEndHz - Variable in class whistleDetector.WhistleParameters
 
searchEndHz - Variable in class whistleDetector.WhistleParametersDialog.PeakPanel
 
searchFirstUnitAfter(long) - Method in class PamguardMVC.PamDataBlock
Search through data units, starting at the last on the assumption that we'll be more interested in more recent data.
searchForLinks(PamObservable, PeakDataUnit, int) - Method in class whistleDetector.WhistleLinker
 
searchForPeaks(PamObservable, FFTDataUnit) - Method in class whistleDetector.BetterPeakDetector
 
searchForPeaks(PamObservable, FFTDataUnit) - Method in class whistleDetector.PeakDetector
 
searchStartButton - Variable in class whistleDetector.WhistleParametersDialog.PeakPanel
 
searchStartHz - Variable in class whistleDetector.WhistleParameters
 
searchStartHz - Variable in class whistleDetector.WhistleParametersDialog.PeakPanel
 
searchx - Variable in class whistlesAndMoans.WhistleToneConnectProcess.ShapeConnector
 
searchx - Variable in class whitesWhistleDetector.WhitesConnectProcess.ShapeConnector
 
searchy - Variable in class whistlesAndMoans.WhistleToneConnectProcess.ShapeConnector
 
searchy - Variable in class whitesWhistleDetector.WhitesConnectProcess.ShapeConnector
 
seaSurfactCelcius - Variable in class videoRangePanel.RefractionParameters
SST in degress celcius.
secondColumnWidth - Variable in class likelihoodDetectionModule.ConfigurationDialogSettings
The second column width.
secondCounter - Variable in class clickDetector.ClickDetector
 
secondFilter - Variable in class clickDetector.ClickDetector
 
seconds - Variable in class likelihoodDetectionModule.GuardBandThresholdNode
 
seconds - Variable in class likelihoodDetectionModule.SecondsBetweenDetectionsNode
 
seconds - Variable in class likelihoodDetectionModule.SignalNode
 
seconds - Variable in class PamUtils.LatLongDialogStrip
 
secondsAfterTrigger - Variable in class SoundRecorder.RecorderTriggerData
Number of seconds of data to record after the trigger event.
secondsAhead - Variable in class AirgunDisplay.AirgunParameters
prediction time in seconds
secondsBeforeTrigger - Variable in class SoundRecorder.RecorderTriggerData
Number of seconds of data to add to the start of the recording prior to the trigger event.
secondsBetweenDetections - Variable in class likelihoodDetectionModule.TargetConfiguration
The seconds between detections.
secondsBetweenDetections - Variable in class likelihoodDetectionModule.thresholdDetector.ThresholdDetectorProcess
 
secondsBetweenDetectionsLimits - Variable in class likelihoodDetectionModule.TargetConfiguration
The seconds between detections limits.
SecondsBetweenDetectionsNode - Class in likelihoodDetectionModule
 
SecondsBetweenDetectionsNode(double, double[]) - Constructor for class likelihoodDetectionModule.SecondsBetweenDetectionsNode
 
secondsLimits - Variable in class likelihoodDetectionModule.GuardBand
The seconds' limits.
secondsLimits - Variable in class likelihoodDetectionModule.SignalBand
The seconds between detection's limits.
secondTimer(long) - Method in class clickDetector.ClickControl
 
secondTimer(long) - Method in class clickDetector.ClickDetector
 
secs - Variable in class GPS.GpsData
 
secs - Variable in class Spectrogram.SpectrogramParamsDialog
 
secsPerScreen - Variable in class Spectrogram.SpectrogramParamsDialog
 
sectionDataList - Variable in class clickDetector.RainbowFile
 
sectionDataPos - Variable in class clickDetector.RainbowFileSectionData
 
sectionHeadPos - Variable in class clickDetector.RainbowFileSectionData
 
sectionLength - Variable in class whistleClassifier.ClassifierInfoArea
 
sectionLength - Variable in class whistleClassifier.FragmentClassifierParams
 
sectionLength - Variable in class whistleClassifier.training.ClassifierTrainer
 
sectionLength - Variable in class whistleClassifier.training.ClassifierTrainingDialog.RunTrainingPanel
 
sectionSamples - Variable in class clickDetector.RainbowFileSectionData
 
sectionStartTime - Variable in class clickDetector.RainbowFileSectionData
 
segment - Variable in class IshmaelDetector.SgramCorrParams
 
segmentData - Variable in class IshmaelDetector.SgramCorrParamsDialog
 
seismicVeto - package seismicVeto
 
select - Variable in class clickDetector.dialogs.ClickDisplayDialog.SpeciesPanel.AutoSelect
 
select - Variable in class noiseMonitor.NoiseTabPanel.DataSelectionPanel.SelectAll
 
selectable - Variable in class generalDatabase.lookupTables.LookupItem
 
selectableItem - Variable in class generalDatabase.lookupTables.LookUpTables
 
selectAll - Variable in class clickDetector.dialogs.ClickDisplayDialog.SpeciesPanel
 
selectAll - Variable in class noiseMonitor.NoiseTabPanel.DataSelectionPanel
 
selectAll(boolean) - Method in class noiseMonitor.NoiseTabPanel.DataSelectionPanel
 
selectAll - Variable in class PamView.ViewTimesDialog
 
selectAllContours(boolean) - Method in class Map.MapParametersDialog.FilePanel
 
selectCalibration(VRCalibrationData) - Method in class videoRangePanel.VRControl
 
selectClassifier() - Method in class rocca.RoccaParametersDialog
 
selectClick(int) - Method in class clickDetector.ClickBTDisplay
Select the next or the preceding click
selectConnection - Variable in class generalDatabase.SQLLogging
 
selectContourStatsFile() - Method in class rocca.RoccaParametersDialog
 
selectControls() - Method in class videoRangePanel.VRSidePanel.VRPanel
 
selectDaqController() - Method in class Array.ChannelPanel
 
selectData() - Method in class clickDetector.offlineFuncs.OfflineEventListPanel
Called when the show selection has changed.
selectDatabase(Frame) - Method in class generalDatabase.DBControl
 
selectDirectory() - Method in class rocca.RoccaParametersDialog
 
selectedBPS - Variable in class terrella.SerialParametersDialogPanel
 
selectedChannels - Variable in class likelihoodDetectionModule.LikelihoodDetectionParameters
The selected channels from the audio data source.
selectedChannels - Variable in class noiseMonitor.NoiseSettings
 
selectedClick - Variable in class clickDetector.ClickBTDisplay
 
selectedData - Variable in class noiseMonitor.NoiseSettings
 
selectedFiles - Variable in class Acquisition.FolderInputParameters
 
selectedList - Variable in class generalDatabase.lookupTables.LookupComponent
 
selectedPhones - Variable in class terrella.TerrellaParametersDialog.TerrellaDimensions
 
selectedPortIdentifier - Variable in class portcomms.PortChooser
The CommPortIdentifier the user chose.
selectedPortIdentifier - Variable in class terrella.SerialParametersDialogPanel
 
selectedPortName - Variable in class portcomms.PortChooser
The name of the choice the user made.
selectedPortName - Variable in class terrella.SerialParametersDialogPanel
 
selectedStats - Variable in class noiseMonitor.NoiseSettings
 
selectedTab - Variable in class PamView.GuiParameters
 
selectedWave1 - Variable in class seismicVeto.VetoProcess.ChannelDetector
 
selectedWave2 - Variable in class seismicVeto.VetoProcess.ChannelDetector
 
selectFile() - Method in class Acquisition.FileInputSystem
 
selectFile() - Method in class IshmaelDetector.MatchFiltParamsDialog
 
selectFolder() - Method in class Acquisition.FolderInputSystem
 
SelectFolder - Class in PamUtils
Makes a dialog panel for selecting a folder typically for file output.
SelectFolder(String, int, boolean) - Constructor for class PamUtils.SelectFolder
 
SelectFolder(String, int) - Constructor for class PamUtils.SelectFolder
 
SelectFolder(int) - Constructor for class PamUtils.SelectFolder
 
selectFolder - Variable in class SoundRecorder.RecorderSettingsDialog
 
selectFolder - Variable in class whistleClassifier.ClassifierTrainingDialog
 
selectFolder - Variable in class whistleClassifier.training.ClassifierTrainingDialog
 
selectFolder - Variable in class whistleClassifier.WhistleClassificationDialog.TrainingPanel
 
SelectFolder.FolderPanel - Class in PamUtils
 
SelectFolder.FolderPanel() - Constructor for class PamUtils.SelectFolder.FolderPanel
 
SelectFolder.FolderPanel.BrowseButton - Class in PamUtils
 
SelectFolder.FolderPanel.BrowseButton() - Constructor for class PamUtils.SelectFolder.FolderPanel.BrowseButton
 
SelectFolder.FolderPanel.SubFolders - Class in PamUtils
 
SelectFolder.FolderPanel.SubFolders() - Constructor for class PamUtils.SelectFolder.FolderPanel.SubFolders
 
selectHeight(int) - Method in class videoRangePanel.VRControl
 
selectionChanged - Variable in class noiseMonitor.NoiseTabPanel
 
selectionChanged() - Method in class noiseMonitor.NoiseTabPanel
 
selectionChanged(int) - Method in class PamView.GroupedSourcePanel
 
selectionChanged(int) - Method in class PamView.SourcePanel
 
selectionChanged(int) - Method in class soundPlayback.PlaybackDialog
 
selectionChanged(int) - Method in class soundPlayback.PlaybackSourcePanel
 
selectionPanel - Variable in class clickDetector.offlineFuncs.OfflineEventListPanel
 
selectItems(boolean) - Method in class PamView.MenuItemEnabler
Select all menu items in a MenuItemEnabler list
selectMapFile(File) - Method in class Map.GebcoMapFile
 
selectMapFile(File) - Method in interface Map.MapFileManager
 
selectStatement - Variable in class generalDatabase.SQLLogging
 
selectSystem(int, boolean) - Method in class generalDatabase.DBControl
 
selectSystem(int, boolean) - Method in class generalDatabase.DBControlUnit
 
selectSystem() - Method in class generalDatabase.DBDialog
 
selfNotification - Variable in class likelihoodDetectionModule.LikelihoodDetectionUnit
A flag indicating whether the controller has received its first notification from itself via the PamGuard system.
send() - Method in class ipcomms.Producer
 
send(String) - Method in class portcomms.CommPortModem
Send to the port Send Car Return & Line Feed (\r\n), instead of using println( ).
sendChar(char) - Method in class portcomms.SerialPortParameters
 
sendCommand(String, boolean, long) - Method in class angleMeasurement.FluxgateWorldAngles
 
sendData(String) - Method in class PamController.NetworkController
 
sendGeneralSettingsNotification - Variable in class PamView.PamDialog
 
sendSerialString(String) - Method in class nmeaEmulator.SerialOutput
 
sendString(String) - Method in class portcomms.SerialPortParameters
 
sendXMLSettings(String) - Method in class backendCInterfase.BackendManager
Send the name of a single XML file to the C side.
senseHigh - Variable in class rocca.RoccaContour
 
senseLow - Variable in class rocca.RoccaContour
 
sensitivity - Variable in class Array.Hydrophone
 
sensitivityPanel - Variable in class Array.HydrophoneElementDialog
 
sensorMap - Variable in class depthReadout.DepthControl
 
sensorPanels - Variable in class depthReadout.MccDialog.SensorsPanel
 
sensorsPanel - Variable in class depthReadout.MccDialog
 
sentenceNumber - Variable in class AIS.AISDataUnit
Message sentence number
sequentialIdentifier - Variable in class AIS.AISDataUnit
The "message sequential identifier" is a number from 0 to 9 that is sequentially assigned as needed.
SequentialTrainingSelector - Class in whistleClassifier.training
Selects groups of fragments into training / test groups simply by concatonating all the files together from some random start point.
SequentialTrainingSelector() - Constructor for class whistleClassifier.training.SequentialTrainingSelector
 
serial - Variable in class terrella.TerrellaStandardDataSetUnit
 
serialComms - package serialComms
 
serialEvent(SerialPortEvent) - Method in class nmeaEmulator.SerialOutput.SerialOutputComm
 
serialEvent(SerialPortEvent) - Method in class serialComms.SerialPortCom
 
serialItem - Variable in class terrella.TerrellaLogger
 
serialNmeaGpsRadio - Variable in class NMEA.NMEAParametersDialog
 
serialNum - Variable in class nidaqdev.NIDeviceInfo
 
serialOutput - Variable in class nmeaEmulator.NMEAFrontEnd
 
SerialOutput - Class in nmeaEmulator
 
SerialOutput(String) - Constructor for class nmeaEmulator.SerialOutput
 
SerialOutput.SerialOutputComm - Class in nmeaEmulator
 
SerialOutput.SerialOutputComm() - Constructor for class nmeaEmulator.SerialOutput.SerialOutputComm
 
serialOutputComm - Variable in class nmeaEmulator.SerialOutput
 
SerialOutputdialog - Class in nmeaEmulator
 
SerialOutputdialog() - Constructor for class nmeaEmulator.SerialOutputdialog
 
serialOutputParameters - Variable in class nmeaEmulator.SerialOutput
 
SerialParametersDialogPanel - Class in terrella
 
SerialParametersDialogPanel() - Constructor for class terrella.SerialParametersDialogPanel
 
SerialParametersDialogPanel.BitsPerSecondComboBoxListener - Class in terrella
 
SerialParametersDialogPanel.BitsPerSecondComboBoxListener() - Constructor for class terrella.SerialParametersDialogPanel.BitsPerSecondComboBoxListener
 
SerialParametersDialogPanel.serialPortsComboBoxListener - Class in terrella
 
SerialParametersDialogPanel.serialPortsComboBoxListener() - Constructor for class terrella.SerialParametersDialogPanel.serialPortsComboBoxListener
 
serialParamsPanel - Variable in class terrella.TerrellaParametersDialog.SimulatedTerellaPanel
 
serialParamsPanel - Variable in class terrella.TerrellaParametersDialog.SourcePanel
 
serialPort - Variable in class NMEA.AcquireNmeaData.SerialPortInterface
 
serialPort - Variable in class nmeaEmulator.InfoPanel
 
serialPort - Variable in class nmeaEmulator.SerialOutput
 
serialPort - Variable in class serialComms.SerialPortCom
 
SERIALPORT_OPEN_TIMEOUTSECONDS - Static variable in class portcomms.OpenCommPort
 
serialPortBitsPerSecond - Variable in class NMEA.NMEAParameters
 
serialPortCom - Variable in class NMEA.AcquireNmeaData.SerialPortInterface
 
SerialPortCom - Class in serialComms
 
SerialPortCom(String, int, CommPortIdentifier, String) - Constructor for class serialComms.SerialPortCom
 
SerialPortCommsStepLock - Class in portcomms
Dial a phone using the Java Communications Package.
SerialPortCommsStepLock() - Constructor for class portcomms.SerialPortCommsStepLock
 
SerialPortCommsStepLock(String) - Constructor for class portcomms.SerialPortCommsStepLock
 
serialPortInterface - Variable in class NMEA.AcquireNmeaData
 
serialPortName - Variable in class NMEA.NMEAParameters
 
serialPortPanel - Variable in class angleMeasurement.FluxgateWorldDialog
 
SerialPortPanel - Class in serialComms
Standard panel for entering serial port settings.
SerialPortPanel() - Constructor for class serialComms.SerialPortPanel
 
SerialPortPanel(String) - Constructor for class serialComms.SerialPortPanel
 
SerialPortPanel(String, boolean, boolean, boolean, boolean, boolean) - Constructor for class serialComms.SerialPortPanel
 
SerialPortParameters - Class in portcomms
 
SerialPortParameters() - Constructor for class portcomms.SerialPortParameters
 
serialPortParameters - Variable in class terrella.TerrellaParameters
 
serialPortsChoice - Variable in class portcomms.PortChooser
The JComboBox for serial ports
serialPortsComboBox - Variable in class terrella.SerialParametersDialogPanel
 
serialPortSelection - Variable in class NMEA.NMEAParametersDialog
 
serialPortsLabel - Variable in class terrella.SerialParametersDialogPanel
 
SerialTextField - Class in nmeaEmulator
 
SerialTextField() - Constructor for class nmeaEmulator.SerialTextField
 
SerialTextField(Document, String, int) - Constructor for class nmeaEmulator.SerialTextField
 
SerialTextField(int) - Constructor for class nmeaEmulator.SerialTextField
 
SerialTextField(String, int) - Constructor for class nmeaEmulator.SerialTextField
 
SerialTextField(String) - Constructor for class nmeaEmulator.SerialTextField
 
serialValue - Variable in enum NMEA.NMEAParameters.NmeaSources
 
serialVersionUID - Static variable in class Acquisition.AcquisitionParameters
 
serialVersionUID - Static variable in class Acquisition.FileInputParameters
 
serialVersionUID - Static variable in class Acquisition.FolderInputParameters
 
serialVersionUID - Static variable in class Acquisition.offlineFuncs.OfflineFileParameters
 
serialVersionUID - Static variable in class Acquisition.SoundCardParameters
 
serialVersionUID - Static variable in class AirgunDisplay.AirgunParameters
 
serialVersionUID - Static variable in class AIS.AISDataUnit
 
serialVersionUID - Static variable in class AIS.AISParameters
 
serialVersionUID - Static variable in class AIS.AISPositionReport
 
serialVersionUID - Static variable in class AIS.AISReport
 
serialVersionUID - Static variable in class AIS.AISStaticData
 
serialVersionUID - Static variable in class amplifier.AmpParameters
 
serialVersionUID - Static variable in class angleMeasurement.AngleLoggingParameters
 
serialVersionUID - Static variable in class angleMeasurement.AngleParameters
 
serialVersionUID - Static variable in class angleMeasurement.FluxgateWorldParameters
 
serialVersionUID - Static variable in class angleVetoes.AngleVetoParameters
 
serialVersionUID - Static variable in class Array.Hydrophone
 
serialVersionUID - Static variable in class Array.PamArray
 
serialVersionUID - Static variable in class Array.Preamplifier
 
serialVersionUID - Static variable in class Array.Streamer
 
serialVersionUID - Static variable in class beakedWhaleProtocol.BeakedExperimentData
 
serialVersionUID - Static variable in class beakedWhaleProtocol.BeakedParameters
 
serialVersionUID - Static variable in class binaryFileStorage.BinaryStoreSettings
 
serialVersionUID - Static variable in class classifier.ClassifierParams
 
serialVersionUID - Static variable in class classifier.GroupMeans
 
serialVersionUID - Static variable in class classifier.LinearClassifierParams
 
serialVersionUID - Static variable in class classifier.MahalanobisParams
 
serialVersionUID - Static variable in class clickDetector.BasicClickIdParameters
 
serialVersionUID - Static variable in class clickDetector.BTDisplayParameters
 
serialVersionUID - Static variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierParameters
 
serialVersionUID - Static variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
serialVersionUID - Static variable in class clickDetector.ClickDisplayManagerParameters
 
serialVersionUID - Static variable in class clickDetector.ClickParameters
 
serialVersionUID - Static variable in class clickDetector.ClickSpectrumParams
 
serialVersionUID - Static variable in class clickDetector.ClickTypeParams
 
serialVersionUID - Static variable in class clickDetector.offlineFuncs.OfflineParameters
 
serialVersionUID - Static variable in class clickDetector.WignerPlotOptions
 
serialVersionUID - Static variable in class dataMap.DataMapParameters
 
serialVersionUID - Static variable in class decimator.DecimatorParams
 
serialVersionUID - Static variable in class depthReadout.DepthParameters
 
serialVersionUID - Static variable in class depthReadout.MccDepthParameters.MccSensorParameters
 
serialVersionUID - Static variable in class depthReadout.MccDepthParameters
 
serialVersionUID - Static variable in class EdgeDetector.EdgeParameters
 
serialVersionUID - Static variable in class fftManager.Complex
 
serialVersionUID - Static variable in class fftManager.FFTDataDisplayOptions
 
serialVersionUID - Static variable in class fftManager.FFTParameters
 
serialVersionUID - Static variable in class fftManager.FFTPluginParamsDialog
 
serialVersionUID - Static variable in class Filters.FilterParameters_2
 
serialVersionUID - Static variable in class Filters.FilterParams
 
serialVersionUID - Static variable in class generalDatabase.DBParameters
 
serialVersionUID - Static variable in class generalDatabase.MySQLParameters
 
serialVersionUID - Static variable in class GPS.GpsData
 
serialVersionUID - Static variable in class GPS.GPSParameters
 
serialVersionUID - Static variable in class IshmaelDetector.EnergySumParams
 
serialVersionUID - Static variable in class IshmaelDetector.EnergySumParamsDialog
 
serialVersionUID - Static variable in class IshmaelDetector.IshDetParams
 
serialVersionUID - Static variable in class IshmaelDetector.MatchFiltParams
 
serialVersionUID - Static variable in class IshmaelDetector.MatchFiltParamsDialog
 
serialVersionUID - Static variable in class IshmaelDetector.SgramCorrParams
 
serialVersionUID - Static variable in class IshmaelDetector.SgramCorrParamsDialog
 
serialVersionUID - Static variable in class IshmaelLocator.IshLocHyperbParams
 
serialVersionUID - Static variable in class IshmaelLocator.IshLocHyperbParamsDialog
 
serialVersionUID - Static variable in class IshmaelLocator.IshLocParams
 
serialVersionUID - Static variable in exception IshmaelLocator.noLocationFoundException
 
serialVersionUID - Static variable in class KernelSmoothing.KernelSmoothingParameters
 
serialVersionUID - Static variable in class landMarks.LandmarkData
 
serialVersionUID - Static variable in class landMarks.LandmarkDatas
 
serialVersionUID - Static variable in class likelihoodDetectionModule.AcquisitionSettings
The constant serialVersionUID that is required by Serializable.
serialVersionUID - Static variable in class likelihoodDetectionModule.CheckRenderer
The Constant serialVersionUID.
serialVersionUID - Static variable in class likelihoodDetectionModule.CheckRenderer.TreeLabel
The Constant serialVersionUID.
serialVersionUID - Static variable in class likelihoodDetectionModule.ConfigurationDialogSettings
The Constant serialVersionUID.
serialVersionUID - Static variable in class likelihoodDetectionModule.GuardBand
The constant serialVersionUID required by Serializable
serialVersionUID - Static variable in class likelihoodDetectionModule.LikelihoodDetectionParameters
The constant serialVersionUID required by Serializable.
serialVersionUID - Static variable in class likelihoodDetectionModule.LikelihoodDetectionParametersDialog
The constant serialVersionUID required by PamDialog
serialVersionUID - Static variable in class likelihoodDetectionModule.LikelihoodFFTParameters
The constant serialVersionUID that is required by Serializable.
serialVersionUID - Static variable in class likelihoodDetectionModule.NewBandNameDialog
The constant serialVersionUID required by Serialize.
serialVersionUID - Static variable in class likelihoodDetectionModule.SignalBand
The constant serialVersionUID required by Serializable.
serialVersionUID - Static variable in class likelihoodDetectionModule.TargetConfiguration
The Constant serialVersionUIDi required by Serializable.
serialVersionUID - Static variable in class likelihoodDetectionModule.TargetConfigurationNameDialog
The Constant serialVersionUID.
serialVersionUID - Static variable in class likelihoodDetectionModule.TreeTable.AlgorithmComboBoxEditor
The Constant serialVersionUID.
serialVersionUID - Static variable in class likelihoodDetectionModule.TreeTable.AssociatedSignalBandEditor
The Constant serialVersionUID.
serialVersionUID - Static variable in class likelihoodDetectionModule.TreeTable.DoubleEditor
The Constant serialVersionUID.
serialVersionUID - Static variable in class likelihoodDetectionModule.TreeTable.ListToTreeSelectionModelWrapper
The Constant serialVersionUID.
serialVersionUID - Static variable in class likelihoodDetectionModule.TreeTable
The Constant serialVersionUID required to make the TreeTable serializable which was necessary due to the inheritance hierarchy.
serialVersionUID - Static variable in class likelihoodDetectionModule.TreeTable.TreeTableCellRenderer
The Constant serialVersionUID.
serialVersionUID - Static variable in class likelihoodDetectionModule.TreeTableModelAdapter
The constant serialVersionUID.
serialVersionUID - Static variable in class listening.ListeningDialog
 
serialVersionUID - Static variable in class listening.ListeningParameters
 
serialVersionUID - Static variable in class listening.SpeciesItem
 
serialVersionUID - Static variable in class loc3d_Thode.TowedArray3DProcessParameters
 
serialVersionUID - Static variable in class Map.MapDetectionData
 
serialVersionUID - Static variable in class Map.MapDetectionsParameters
 
serialVersionUID - Static variable in class Map.MapPanel
 
serialVersionUID - Static variable in class Map.MapParameters
 
serialVersionUID - Static variable in class nidaqdev.NIDaqParams
 
serialVersionUID - Static variable in class NMEA.NMEABitArray
 
serialVersionUID - Static variable in class NMEA.NMEAParameters
 
serialVersionUID - Static variable in class nmeaEmulator.NMEAEmulatorParams
 
serialVersionUID - Static variable in class noiseMonitor.NoiseMeasurementBand
 
serialVersionUID - Static variable in class noiseMonitor.NoiseSettings
 
serialVersionUID - Static variable in class PamController.PamControlledUnitSettings
 
serialVersionUID - Static variable in class PamController.PamViewParameters
 
serialVersionUID - Static variable in class PamController.SettingsFileData
 
serialVersionUID - Static variable in class PamController.UsedModuleInfo
 
serialVersionUID - Static variable in class PamDetection.IshDetection
 
serialVersionUID - Static variable in class PamguardMVC.RawDataDisplayOptions
 
serialVersionUID - Static variable in class pamMaths.PamVector
 
serialVersionUID - Static variable in exception pamMaths.PamVectorException
 
serialVersionUID - Static variable in class PamModel.PamModelSettings
 
serialVersionUID - Static variable in class pamScrollSystem.AbstractPamScroller
 
serialVersionUID - Static variable in class pamScrollSystem.PamScrollerData
 
serialVersionUID - Static variable in class pamScrollSystem.StoredScrollerData
 
serialVersionUID - Static variable in class PamUtils.LatLong
 
serialVersionUID - Static variable in class PamUtils.Splash
 
serialVersionUID - Static variable in class PamView.ColorSettings
 
serialVersionUID - Static variable in class PamView.CornerLayoutContraint
 
serialVersionUID - Static variable in class PamView.GroupedSourceParameters
 
serialVersionUID - Static variable in class PamView.GuiParameters
 
serialVersionUID - Static variable in class PamView.PamDialog
 
serialVersionUID - Static variable in class PamView.PamHelpContentViewer
 
serialVersionUID - Static variable in class PamView.PamHelpContentViewerUI
 
serialVersionUID - Static variable in class PamView.PamObjectViewerSettings
 
serialVersionUID - Static variable in class PamView.PamSymbol
 
serialVersionUID - Static variable in class PamView.SymbolSettingsStoreUnit
 
serialVersionUID - Static variable in class patchPanel.PatchPanelParameters
 
serialVersionUID - Static variable in class performanceTests.GraphicsDotTest2.PlotWindow
 
serialVersionUID - Static variable in class radardisplay.RadarParameters
 
serialVersionUID - Static variable in class rocca.RoccaParameters
for serialization
serialVersionUID - Static variable in class seismicVeto.VetoParameters
 
serialVersionUID - Static variable in class simulatedAcquisition.SimDialogPanel
 
serialVersionUID - Static variable in class simulatedAcquisition.SimObject
 
serialVersionUID - Static variable in class simulatedAcquisition.SimParameters
 
serialVersionUID - Static variable in class soundPlayback.PlaybackParameters
 
serialVersionUID - Static variable in class SoundRecorder.RecorderSettings
 
serialVersionUID - Static variable in class Spectrogram.SpectrogramParameters
 
serialVersionUID - Static variable in class spectrogramNoiseReduction.averageSubtraction.AverageSubtractionParameters
 
serialVersionUID - Static variable in class spectrogramNoiseReduction.medianFilter.MedianFilterParams
 
serialVersionUID - Static variable in class spectrogramNoiseReduction.SpectrogramNoiseSettings
 
serialVersionUID - Static variable in class spectrogramNoiseReduction.threshold.ThresholdParams
 
serialVersionUID - Static variable in class terrella.SerialParametersDialogPanel
 
serialVersionUID - Static variable in class terrella.TerrellaParameters
 
serialVersionUID - Static variable in class userDisplay.UserDisplayParameters
 
serialVersionUID - Static variable in class videoRangePanel.RefractionParameters
 
serialVersionUID - Static variable in class videoRangePanel.VRCalibrationData
 
serialVersionUID - Static variable in class videoRangePanel.VRHeightData
 
serialVersionUID - Static variable in class videoRangePanel.VRParameters
 
serialVersionUID - Static variable in class whistleClassifier.FragmentClassifierParams
 
serialVersionUID - Static variable in class whistleClassifier.training.TrainingContour
 
serialVersionUID - Static variable in class whistleClassifier.training.TrainingDataSet
 
serialVersionUID - Static variable in class whistleClassifier.TrainingContour
 
serialVersionUID - Static variable in class whistleClassifier.TrainingDataSet
 
serialVersionUID - Static variable in class whistleClassifier.WhistleClassificationDialog
 
serialVersionUID - Static variable in class whistleClassifier.WhistleClassificationParameters
 
serialVersionUID - Static variable in class whistleDetector.WhistleParameters
 
serialVersionUID - Static variable in class whistlesAndMoans.WhistleToneParameters
 
serialVersionUID - Static variable in class whitesWhistleDetector.WhitesParameters
 
serialVersionUID - Static variable in class WorkshopDemo.WorkshopProcessParameters
 
serialWriter - Variable in class nmeaEmulator.SerialOutput
 
serverConnect(MySQLParameters) - Method in class generalDatabase.MySQLSystem
 
serverConnect(String, int, String, String) - Method in class generalDatabase.MySQLSystem
 
serverConnection - Variable in class generalDatabase.MySQLSystem
 
serverDisconnect() - Method in class generalDatabase.MySQLSystem
 
serverIP - Variable in class ishmaelComms.Client
 
serverIP - Variable in class ishmaelComms.ProcessIshmaelData.Client
 
sessionStartTime - Static variable in class PamUtils.PamCalendar
Time that data processing started - can be set to a file time when files are being processed, otherwise it's just the current time.
SET_FILENAME - Static variable in class offlineProcessing.TaskMonitorData
 
SET_NFILES - Static variable in class offlineProcessing.TaskMonitorData
 
SET_PROGRESS - Static variable in class offlineProcessing.TaskMonitorData
 
SET_STATUS - Static variable in class offlineProcessing.TaskMonitorData
 
setAbsBlockIndex(int) - Method in class PamguardMVC.PamDataUnit
 
setAcceptFolders(boolean) - Method in class PamUtils.PamFileFilter
 
setAccX(double) - Method in class terrella.TerrellaStandardDataSetUnit
 
setAccY(double) - Method in class terrella.TerrellaStandardDataSetUnit
 
setAccZ(double) - Method in class terrella.TerrellaStandardDataSetUnit
 
setAcquisitionSettings(AcquisitionSettings) - Method in class likelihoodDetectionModule.LikelihoodDetectionParameters
Sets the acquisition settings were used to create the TargetConfigurations, but does NOT force a error-checking synchronization the way syncWithAcquisitionSettings() does.
setAcquisitionSettings(AcquisitionSettings) - Method in class likelihoodDetectionModule.TreeTableModel
 
setActive(boolean) - Method in class clickDetector.ClickClassifiers.basic.BasicIdentifierPanel
 
setActive(boolean) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierPanel
 
setActive(boolean) - Method in interface clickDetector.ClickClassifiers.ClassifyDialogPanel
 
setActiveEdge(int) - Method in class nidaqdev.Nidaq.DAQmxCfgSampClkTimingParams
 
setAIRange(int, double[]) - Method in class nidaqdev.NIDaqParams
 
setAlgorithm(String) - Method in class likelihoodDetectionModule.AlgorithmNode
 
setAlgorithm(NormalizerProcess.NormalizerAlgorithm) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the algorithm.
setAllBoards(int) - Method in class nidaqdev.NIChannelListPanel
 
setAllBoxes(boolean) - Method in class PamView.ViewTimesDialog
 
setAllowEdits(boolean) - Method in class generalDatabase.lookupTables.LookupComponent
 
setAllowNullSelection(boolean) - Method in class generalDatabase.lookupTables.LookupComponent
 
setAllowScaleMultiples(boolean) - Method in class Layout.PamAxis
 
setAlways - Variable in class GPS.UpdateClockDialog
 
setAmplitude(int, double) - Method in class clickDetector.ClickDetection
Set the amplitude for a given channel
setAmplitude(int, double) - Method in class clickDetector.OldClickClass
 
SetAmplitudePanelBorder() - Method in class Spectrogram.SpectrogramDisplay.AmplitudePanel
needs to be called whenever the other sizes change to kepp borders the same.
setAnalEndTime(long) - Method in class PamController.PamViewParameters
 
setAnalStartTime(long) - Method in class PamController.PamViewParameters
 
setAnalysisDate(long) - Method in class binaryFileStorage.BinaryHeader
 
setAnchor(IshDetWrapper) - Method in class PamDetection.IshAnchorGroup
 
setAngle(double, int) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setAngle(double, int) - Method in class PamDetection.PamLocalisation
Deprecated.  
setAngle(Double) - Method in class videoRangePanel.ImageAnglePanel
 
setAngleLoggingParameters(AngleLoggingParameters) - Method in class angleMeasurement.AngleParameters
 
setAngleOffset(double) - Method in class angleMeasurement.AngleMeasurement
 
setAngleParameters(AngleParameters) - Method in class angleMeasurement.AngleMeasurement
 
setAngles(double[]) - Method in class clickDetector.ClickLocalisation
 
setAngles(double[]) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setAnglesAndErrors(double[][]) - Method in class clickDetector.ClickLocalisation
 
setAngleScales(boolean) - Method in class Layout.PamAxis
Easy way to make scales end at 45, 90, 180, etc and step in sensible 45, 90, etc.
setAngletotal() - Method in class videoRangePanel.AcceptMeasurementDialog
 
setAngleVetoParameters(AngleVetoParameters) - Method in class angleVetoes.AngleVetoes
set angle veto parameters
setArray() - Method in class simulatedAcquisition.SimProcess
 
setArrayFile(String) - Method in class Array.PamArray
 
setArrayLocator(int) - Method in class Array.PamArray
 
setArrayName(String) - Method in class Array.PamArray
 
setArraySizeInSamps(int) - Method in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
setArrayType(int) - Method in class Array.PamArray
 
setAsioControlPanelValid(boolean) - Method in class asiojni.AsioJniInterface.AsioDriverSettings
 
setAttributes(RoccaContourDataBlock) - Method in class rocca.RoccaClassifier
Sets up the available datablock fields to match the classifier model
setAudioFileFilter(PamFileFilter) - Method in class Acquisition.FolderInputSystem
 
setAutoGrouping(boolean) - Method in class PamView.GroupedSourcePanel
 
setAutoInsets(Graphics) - Method in class Layout.PamAxisPanel
Work out how much space is required around the central plot for axis.
setAutoInsets(boolean) - Method in class Layout.PamAxisPanel
 
setAutoScale() - Method in class noiseMonitor.NoiseTabPanel
 
setAxisLimits() - Method in class Spectrogram.SpectrogramDisplay
 
setAxisPanel(Component) - Method in class Layout.PamFramePlots
 
setAxisRange(double) - Method in class clickDetector.TriggerFunctionDisplay.TriggerFunctionDisplayPanel
 
setAxisRange() - Method in class fftManager.FFTPluginPanelProvider.FFTPluginPanel
 
setAxisRange(double) - Method in class PamguardMVC.RawDataDisplay.RawDisplayPanel
 
setBackendProcess(BackendProcess) - Method in class PamguardMVC.PamProcess
 
setBackground(Color) - Method in class beakedWhaleProtocol.BeakedSidePanel.BeakedPanel
 
setBackground(Color) - Method in class clickDetector.ClickBTDisplay.BTPlot
 
setBackground(Color) - Method in class clickDetector.ClickSidePanel.SidePanel
 
setBackground(Color) - Method in class depthReadout.DepthSidePanel.DepthPanel
 
setBackground(Color) - Method in class generalDatabase.DBSidePanel.DBPanel
 
setBackground(Color) - Method in class Layout.DisplayPanel.DisplayInnerPanel
 
setBackground(Color) - Method in class likelihoodDetectionModule.CheckRenderer
 
setBackground(Color) - Method in class likelihoodDetectionModule.CheckRenderer.TreeLabel
 
setBackground(Color) - Method in class Map.GpsTextDisplay
 
setBackground(Color) - Method in class Map.MapPanel
 
setBackground(Color) - Method in class Map.MouseMeasureDisplay
 
setBackground(Color) - Method in class PamView.PamBorderPanel
 
setBackground(Color) - Method in class PamView.PamButton
 
setBackground(Color) - Method in class PamView.PamCheckBox
 
setBackground(Color) - Method in class PamView.PamLabel
 
setBackground(Color) - Method in class PamView.PamRadioButton
 
setBackground(Color) - Method in class rocca.RoccaSidePanel.SidePanel
 
setBackground(double) - Method in class seismicVeto.VetoBackgroundDataUnit
 
setBackground(Color) - Method in class SoundRecorder.RecorderButton
 
setBackground(Color) - Method in class whistleDetector.WhistleSidePanel.SidePanel
 
setBackground(double) - Method in class WorkshopDemo.BackgroundDataUnit
 
setBackgroundNoise(double) - Method in class likelihoodDetectionModule.BackgroundNode
 
setBandName(String) - Method in class likelihoodDetectionModule.AssociatedBandNode
 
setBandwidth(double[]) - Method in class Array.Hydrophone
 
setBandwidth(double[]) - Method in class Array.Preamplifier
 
setBarPosition(double) - Method in class Spectrogram.ScalePanel
 
setBaudRate(int) - Method in class serialComms.SerialPortPanel
 
setBAutoScroll(boolean) - Method in class clickDetector.ClickDisplayManager
 
setBeakedLocationData(BeakedLocationData) - Method in class beakedWhaleProtocol.BeakedDataUnit
 
setBearing(double) - Method in class beakedWhaleProtocol.BeakedLocationDialog
 
setBearing(int, double) - Method in class loc3d_Thode.StationQueue
 
setBearing(int, double) - Method in class Localiser.GroupDetection
 
setBestNumber(Short) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setBinaryDataSource(BinaryDataSource) - Method in class PamguardMVC.PamDataBlock
 
setBinaryStorageStream(BinaryOutputStream) - Method in class binaryFileStorage.BinaryDataSource
 
setBinaryStoreSettings(BinaryStoreSettings) - Method in class binaryFileStorage.BinaryStore
 
setBinCentres(boolean) - Method in class pamMaths.PamHistogram
 
setBit(int, boolean) - Method in class PamUtils.Ascii6Bit
 
SetBit(int, int, int) - Static method in class PamUtils.PamUtils
 
SetBit(int, int, boolean) - Static method in class PamUtils.PamUtils
 
setBitsPerSecond(int) - Method in class portcomms.SerialPortParameters
 
setBlockIncrement(long) - Method in class pamScrollSystem.AbstractPamScroller
 
setBlockIncrement(long) - Method in class pamScrollSystem.PamScroller
 
setBorder(Border) - Method in class clickDetector.ClickSpectrum.SpectrumAxis
 
setBorder(Border) - Method in class noiseMonitor.NoiseTabPanel.PlotAxesPanel
 
setBorder(Border) - Method in class PamView.PamBorderPanel
 
setBorderColour(Color) - Method in class generalDatabase.lookupTables.LookupItem
 
SetBorderMins(int, int, int, int) - Method in class Layout.PamAxisPanel
 
setBorderSize(EmptyBorder) - Method in class Layout.PamInternalFrame
 
setBounds(int, int, int, int) - Method in class likelihoodDetectionModule.TreeTable.TreeTableCellRenderer
This is overridden to set the height to match that of the JTable.
setBufferedClipRectangle(int, int, int, int, boolean) - Method in class PamView.ScrollableBufferedImage
 
setBufferedClipRectangle(Rectangle, boolean) - Method in class PamView.ScrollableBufferedImage
 
setButton - Variable in class GPS.UpdateClockDialog
 
setButtonStates(int) - Method in class SoundRecorder.RecorderSidePanel
 
setButtonStates(int) - Method in class SoundRecorder.RecorderTabPanel
 
setButtonStates(int) - Method in interface SoundRecorder.RecorderView
 
setByteData(byte[]) - Method in class PamUtils.Ascii6Bit
 
setCalculatedAmlitudeDB(double) - Method in class PamDetection.AcousticDataUnit
 
setCalibratePoint1(Point) - Method in class videoRangePanel.VRControl
 
setCalibratePoint2(Point) - Method in class videoRangePanel.VRControl
 
setCalibrationData(double[]) - Method in class angleMeasurement.AngleMeasurement
 
setCalibrationData(double[]) - Method in class angleMeasurement.AngleParameters
 
setCalibrationDatas(ArrayList<VRCalibrationData>) - Method in class videoRangePanel.VRParameters
 
setCalibrationInterval(int) - Method in class angleMeasurement.AngleParameters
 
setCallType(String) - Method in class PamDetection.IshDetection
 
setCanEdit(boolean) - Method in class noiseMonitor.NoiseMeasurementBand
 
setCanMultiThread(boolean) - Method in class PamguardMVC.PamProcess
 
setCanRemove(boolean) - Method in class noiseMonitor.NoiseMeasurementBand
 
setCanView(boolean) - Method in class generalDatabase.SQLLogging
 
setChanged() - Method in class PamguardMVC.PamObservable
Set flag to say the data have changed
setChannelBitmap(int) - Method in class clickDetector.ClickDetection
 
setChannelBitmap(int) - Method in class PamguardMVC.PamDataUnit
 
setChannelBitmap(int) - Method in class PamView.GroupedSourceParameters
 
setChannelGroups(int[]) - Method in class PamView.GroupedSourcePanel
 
setChannelGroups(int[]) - Method in class PamView.GroupedSourceParameters
 
setChannelList(int[]) - Method in class Acquisition.AcquisitionParameters
 
setChannelList(int, int) - Method in class Acquisition.AcquisitionParameters
 
setChannelList(int) - Method in class PamView.SourcePanel
Set the current channel selection
setChannelListIndexes(int[]) - Method in class Acquisition.AcquisitionParameters
Sets the channel list indeces
setChannelMap(int) - Method in class eventCounter.DataCounter
 
setChannelMap(int) - Method in class PamguardMVC.PamDataBlock
 
setChannels(int) - Method in class Acquisition.AcquisitionDialog
Called by the specific DaqSystem to set the number of channels when it is set by the DaqSystem (for instance FileInputSystem will set it to the number of channels in the current file.
setChannels(int) - Method in class angleVetoes.AngleVeto
 
setCharData(StringBuffer) - Method in class NMEA.NMEADataUnit
 
setCheckedConnection(Connection) - Method in class generalDatabase.PamTableDefinition
 
setClassifiedAs(String) - Method in class rocca.RoccaContourDataBlock
 
setClassifierClass(Class) - Method in class classifier.ClassifierParams
 
setClassifierLoaded(boolean) - Method in class rocca.RoccaProcess
 
setClassifierManager(ClickClassifierManager) - Method in class clickDetector.ClickControl
 
setClassifierParams(ClassifierParams) - Method in class classifier.Classifier
Will be called to load stored parameters into a classifier.
setClassifierParams(ClassifierParams) - Method in class classifier.LinearClassifier
 
setClassifierParams(ClassifierParams) - Method in class classifier.MahalanobisClassifier
 
setClassifierParams(ClassifierParams) - Method in class whistleClassifier.FragmentClassifierParams
 
setClassifierType(int) - Method in class whistleClassifier.FragmentClassifierParams
 
setClickDetector(ClickDetector) - Method in class clickDetector.ClickDetection
 
setClickIdentifier(ClickIdentifier) - Method in class clickDetector.ClickControl
 
setClickLocalisation(ClickLocalisation) - Method in class clickDetector.ClickDetection
 
setClickParameters(ClickParameters) - Method in class clickDetector.ClickControl
 
setClickType(byte) - Method in class clickDetector.ClickDetection
 
setClockOnStartup - Variable in class GPS.GPSParameters
 
setCode(int) - Method in interface clickDetector.ClickClassifiers.basicSweep.CodeHost
 
setCode(int) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.OptionsBlock
 
setCode(String) - Method in class generalDatabase.lookupTables.LookupItem
 
setColor(Component, PamColors.PamColor) - Method in class PamView.PamColors
Color a component immediately.
setColorManagedColor(Component) - Method in class PamView.PamColors
 
setColors() - Method in class PamView.PamColors
 
setColour(Color) - Method in class AirgunDisplay.AirgunParametersDialog.ExclusionPanel
 
setColourMap(ColourArray.ColourArrayType) - Method in class Spectrogram.SpectrogramParameters
 
setColours(boolean) - Method in class generalDatabase.DBSidePanel
 
setColumnData(int, Object) - Method in class generalDatabase.SQLLogging
Data values going in and out of the database are stored with their respective PamTableItems.
setComboFromCode() - Method in class generalDatabase.lookupTables.LookupComponent
 
setComment(String) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setComment(String) - Method in class listening.ThingHeard
 
setCommPortName(String) - Method in class portcomms.SerialPortParameters
 
setCompleteChannel(int) - Method in class simulatedAcquisition.SimSound
 
setConfigurationDialogExpandedState(String) - Method in class likelihoodDetectionModule.TreeTableModel
Sets the configuration dialog expanded state.
setConfigurationDialogExpandedState(String) - Method in class likelihoodDetectionModule.TreeTableModelAdapter
Sets the configuration dialog expanded state.
setConfigurationDialogSettings(ConfigurationDialogSettings) - Method in class likelihoodDetectionModule.LikelihoodDetectionParameters
Sets the configuration dialog settings that are used to have consistent user settings for the configuration dialog between program executions.
setConfigurationDialogSettings(ConfigurationDialogSettings) - Method in class likelihoodDetectionModule.TreeTableModel
Sets the configuration dialog settings that are to be preserved with the LikelihoodDetectionParameters.
setConfigurationDialogSettings(ConfigurationDialogSettings) - Method in class likelihoodDetectionModule.TreeTableModelAdapter
Sets the configuration dialog settings.
setConfusionMatrix(Matrix) - Method in class whistleClassifier.FragmentClassifierParams
 
setConnectionType(int) - Method in class whistlesAndMoans.WhistleToneConnectProcess.ShapeConnector
 
setConnectionType(int) - Method in class whitesWhistleDetector.WhitesConnectProcess.ShapeConnector
 
setConnectType(int) - Method in class whistlesAndMoans.WhistleToneParameters
 
setContour(RoccaContourDataBlock) - Method in class rocca.RoccaSightingDataUnit
 
setContoursPerSet() - Method in class whistleClassifier.training.TrainingDataGroup
After a data set has been added, work out the number of contours in each data set.
setControls(ClickParameters) - Method in class clickDetector.ClickToolBar
 
setCoordinate(double[]) - Method in class Array.Hydrophone
 
setCoordinate(int, double) - Method in class Array.Streamer
 
setCoordinateError(int, double) - Method in class Array.Hydrophone
Set the coordinate error on one of the three dimensions.
setCoordinateError(int, double) - Method in class Array.Streamer
 
setCoordinateErrors(double[]) - Method in class Array.Hydrophone
Set the coordinate error array.
setCoordinateErrors(double[]) - Method in class Array.Streamer
 
setCoordinates(double[]) - Method in class Array.Streamer
 
setCoreModule(boolean) - Method in class PamModel.PamModuleInfo
 
setCounter(boolean) - Method in class generalDatabase.PamTableItem
 
setCountSeconds() - Method in class eventCounter.EventCounterSidePanel
 
setCoupleAllScrollers(AbstractPamScroller, boolean) - Method in class pamScrollSystem.ViewerScrollerManager
 
setCourseOverGround(double) - Method in class GPS.GpsData
 
setCrossReferenceItem(PamTableItem) - Method in class generalDatabase.PamTableItem
Sets the cross reference item.
setCrossReferenceItem(String, String) - Method in class generalDatabase.PamTableItem
Sets the cross reference item.
setCumulativeContourCount(int[]) - Method in class whistleClassifier.training.TrainingDataGroup
 
setCurrentArray(PamArray) - Method in class Array.ArrayManager
 
setCurrentCalibration(VRCalibrationData) - Method in class videoRangePanel.VRParameters
 
setCurrentCalibrationIndex(int) - Method in class videoRangePanel.VRParameters
 
setCurrentConnection(Connection) - Method in class generalDatabase.pamCursor.PamCursor
 
setCurrentHeightIndex(int) - Method in class videoRangePanel.VRParameters
 
setCurrentID(String) - Method in class PamView.PamHelp
 
setCurrentID(String) - Method in class PamView.PamHelpBroker
 
setCurrentID(Map.ID) - Method in class PamView.PamHelpContentViewer
 
setCurrentID(String) - Method in class PamView.PamHelpContentViewer
 
setCurrentMethodId(int) - Method in class videoRangePanel.VRRangeMethods
 
setCurrentMousePoint(Point) - Method in class PamView.zoomer.ZoomPolygon
 
setCurrentStream(int) - Method in class binaryFileStorage.BinaryMapMakeProgress
 
setCurrentSymbol(PamSymbol) - Method in class PamView.PamSymbolSelector
 
setCurrentURL(URL) - Method in class PamView.PamHelpBroker
 
setCurrentURL(URL) - Method in class PamView.PamHelpContentViewer
 
setCurrentView(String) - Method in class PamView.PamHelpBroker
 
setCursorTime(Long) - Method in class dataMap.SummaryPanel
 
setCursorType(int) - Static method in class generalDatabase.pamCursor.PamCursorManager
Set the cursor type, SCROLLABLE or NON_SCROLLABLE
setDaqProcess(AcquisitionProcess) - Method in class Acquisition.AcquisitionControl
 
setDaqSystemType(String) - Method in class Acquisition.AcquisitionParameters
 
setDaqSystemType(String) - Method in class Acquisition.DaqStatusDataUnit
 
setDaqType(String) - Method in class Acquisition.AcquisitionCParameters
 
setData(double[]) - Method in class likelihoodDetectionModule.linearAverageSpectra.AveragedSpectraDataUnit
 
setData(NormalizedData[]) - Method in class likelihoodDetectionModule.normalizer.NormalizedDataUnit
 
setData(double[]) - Method in class likelihoodDetectionModule.spectralEti.SpectralEtiDataUnit
 
setData(double[]) - Method in class nidaqdev.Nidaq.DaqData
 
setData(LoadQueueProgressData) - Method in class pamScrollSystem.LoadingDataDialog
 
setDatabaseId(int) - Method in class generalDatabase.lookupTables.LookupItem
 
setDatabaseIndex(int) - Method in class PamguardMVC.PamDataUnit
 
setDatabaseUpdateOf(int) - Method in class PamguardMVC.PamDataUnit
 
setDataBits(int) - Method in class portcomms.SerialPortParameters
 
setDataBits(int) - Method in class serialComms.SerialPortPanel
 
setDataBlock(PamDataBlock<T>) - Method in class offlineProcessing.OfflineTask
 
setDataBlock(PamDataBlock) - Method in class PamView.ObserverListPopup
 
setDataCountSeconds(int) - Method in class eventCounter.DataCounter
 
setDataDate(long) - Method in class binaryFileStorage.BinaryHeader
 
setDataGain(double[]) - Method in class amplifier.AmplifiedDataBlock
 
setDataName(String) - Method in class PamguardMVC.PamDataBlock
 
setDataOk(boolean) - Method in class GPS.GpsData
 
setDataSource(String) - Method in class PamView.GroupedSourceParameters
 
setDataType(byte) - Method in class clickDetector.ClickDetection
 
setDataUnitFileInformation(DataUnitFileInformation) - Method in class PamguardMVC.PamDataUnit
 
setDataUnitMatcher(DataUnitMatcher) - Method in class PamguardMVC.DataUnitFinder
 
setDate(int) - Method in class GPS.GpsData
 
setDayTime() - Method in class PamView.PamColors
 
setDBamplitude(double) - Method in class clickDetector.OldClickClass
 
setDBAmplitude(double) - Method in class whistleDetector.WhistleShape
 
setDbParams(boolean) - Method in class generalDatabase.MySQLDialogPanel
 
setDeclination(double) - Method in class terrella.TerrellaStandardDataSetUnit
 
setDefaultChannelList() - Method in class Acquisition.AcquisitionParameters
Creates a default channel list 0,1,2,3,4 etc.
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamButton
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamCheckBox
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamDesktopPane
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamLabel
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamPanel
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamProgressBar
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamRadioButton
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamScrollPane
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamSlider
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamSymbol.KeyPanel
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamTabbedPane
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.TopToolBar
 
setDefaultColor(PamColors.PamColor) - Method in class SoundRecorder.RecorderTabPanel.RPanel
 
setDefaultFile(String) - Method in class PamController.PamSettingManager
Set the default (first) file in the settings file data.
setDefaultLoadtime(long) - Method in class pamScrollSystem.AbstractPamScroller
 
setDefaultMaxFreq() - Method in class Spectrogram.SpectrogramParamsDialog
 
setDefaultMinFreq() - Method in class Spectrogram.SpectrogramParamsDialog
 
setDefaultName(String) - Method in class PamModel.PamModuleInfo
 
setDefaultRange(double) - Method in class PamView.PamDetectionOverlayGraphics
 
setDefaultSymbol(PamSymbol) - Method in class landMarks.LandmarkControl
 
setDefaultTime(int) - Method in class Map.MapDetectionsManager
 
setDefaultValue(double) - Method in class pamScrollSystem.RangeSpinner
 
setDelay(int, double) - Method in class clickDetector.ClickDetection
Set the time of arrival delay in samples.
setDelay(int) - Method in class clickDetector.OldClickClass
 
setDelay(int) - Method in class PamUtils.TimedObservable
 
setDelay(int, int) - Method in class whistleDetector.WhistleLocalisation
 
setDelayCorrection(double) - Method in class clickDetector.ClickDetection
Set the correction to the delay in fractions of a sample (derived from quadratic interpolation around the peak of the cross correlation function)
setDelayCorrection(double) - Method in class clickDetector.ClickLocalisation
 
setDeleted(LookupItem) - Method in class generalDatabase.lookupTables.LookupList
 
setDepth(double) - Method in class Array.Hydrophone
 
setDepth(double) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setDepth(int) - Method in class Map.MapContour
 
setDepth(double) - Method in class PamDetection.PamLocalisation
Deprecated.  
setDepthControl(DepthControl) - Method in class Array.ArrayManager
 
setDepthData(double[]) - Method in class depthReadout.DepthDataUnit
 
setDepthSystem(DepthSystem) - Method in class depthReadout.DepthControl
 
setDescription(String) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.IdBlock
 
setDescription(String) - Method in class PamView.ManagedSymbolInfo
 
setDescription(String) - Method in class PamView.SymbolSettingsStoreUnit
 
setDetData(double[]) - Method in class IshmaelDetector.IshDetFnDataUnit
 
setDetectionData(boolean) - Method in class PamView.PamDetectionOverlayGraphics
 
setDetectionType(String) - Method in class PamDetection.PamDetection
 
setDeviceHoverInfo(int) - Method in class nidaqdev.NIChannelListPanel
 
setDeviceIsSimulated(boolean) - Method in class nidaqdev.Nidaq.DAQmxGetDevIsSimulatedParams
 
setDeviceList(int[]) - Method in class nidaqdev.NIDaqParams
 
setDeviceList(int[]) - Method in class nidaqdev.NIDAQProcess
 
setDeviceName(String) - Method in class nidaqdev.Nidaq.DAQmxGetDevIsSimulatedParams
 
setDeviceRangeList(int) - Method in class nidaqdev.NIChannelListPanel
 
setDialogComponent(JComponent) - Method in class PamView.PamDialog
Used to set the main panel containing dialog controls -
setDimensions(double, double, double, double) - Method in class GPS.ShipDimensionsDrawing
 
setDimensions(double[]) - Method in class GPS.ShipDimensionsFields
 
setDiscard(Boolean) - Method in class clickDetector.ClickTypeParams
 
setDiscardSmallOnes(boolean) - Method in class whistlesAndMoans.FragmentingFragmenter
Set by teh RejoinFragments superclass so that all fragments are kept
setDisplayChannels(int) - Method in class clickDetector.ClickBTDisplay
 
setDoRun(boolean) - Method in class offlineProcessing.OfflineTask
Set whether or not this task within a taskGroup should be run.
setDrawLine(boolean) - Method in class Layout.PamAxis
 
setDrawLineToLocations(boolean) - Method in class PamView.PamDetectionOverlayGraphics
 
setDriverName(String) - Method in class asiojni.AsioJniInterface.AsioDriverSettings
 
setDTG(double) - Method in class beakedWhaleProtocol.BeakedControl
 
setDuration(long) - Method in class PamDetection.AcousticDataUnit
 
setDuration(long) - Method in class pamScrollSystem.LoadOptionsDialog
 
setDutyCycle(double) - Method in class rocca.RoccaContourDataUnit
 
setdX(double) - Method in class Array.Hydrophone
Set the error on the hydrophone x coordinate
setDx(double) - Method in class Array.Streamer
 
setdY(double) - Method in class Array.Hydrophone
Set the error on the hydrophone y coordinate
setDy(double) - Method in class Array.Streamer
 
setdZ(double) - Method in class Array.Hydrophone
Set the error on the hydrophone z coordinate
setDz(double) - Method in class Array.Streamer
 
setEastAxis(PamAxis) - Method in class Layout.PamAxisPanel
 
setEastPanel(Component) - Method in class Layout.PamFramePlots
 
setEchoTime(int, double) - Method in class loc3d_Thode.StationQueue
 
setElement(int, double) - Method in class pamMaths.PamVector
Set a single vector element
setEnableBox(boolean) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.IdBlock
 
setEnabled(boolean) - Method in class pamScrollSystem.RangeSpinner
Enable the controls
setEnabled(boolean) - Method in class PamUtils.LatLongDialogStrip
 
setEnabled(boolean) - Method in class PamUtils.SelectFolder
 
setEnabled(boolean) - Method in class PamView.SourcePanel
 
setEndAngle(double) - Method in class angleVetoes.AngleVeto
 
setEndFrequencyNode(EndFrequencyNode) - Method in class likelihoodDetectionModule.StartFrequencyNode
 
setEndTime(long) - Method in class dataMap.OfflineDataMapPoint
 
setEndTime(long) - Method in class PamguardMVC.OfflineDataMapPoint
 
setEnergy(double) - Method in class rocca.RoccaContourDataUnit
 
setErrorReferenceAngle(int, double) - Method in class Localiser.GroupDetection
 
setEstimatedPeakTimeAccuracy(double) - Method in class likelihoodDetectionModule.thresholdDetector.ThresholdDetectorDataUnit
 
setETA(int) - Method in class whistleClassifier.training.ClassifierTrainingDialog.ProgressPanel
 
setEtaSeconds(double) - Method in class beakedWhaleProtocol.BeakedControl
 
setEventCounterMonitor(EventCounterMonitor) - Method in class eventCounter.DataCounter
 
setEventEndTime(long) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setEventId(int) - Method in class clickDetector.ClickDetection
 
setEventId(int) - Method in class clickDetector.OldClickClass
 
setEventId(int) - Method in class Localiser.GroupDetection
 
setEventTrigger(int, int) - Method in class eventCounter.DataCounter
 
setEventType(String) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setExpanded(TreePath) - Method in class likelihoodDetectionModule.TreeTable.TreeTableCellRenderer
Sets the expanded state for a tree path to true.
setExperimentStatus(int) - Method in class beakedWhaleProtocol.BeakedControl
 
setExtraEast(int) - Method in class PamView.JBufferedPanel
 
setExtraInfo(byte[]) - Method in class binaryFileStorage.BinaryHeader
 
setExtraNorth(int) - Method in class PamView.JBufferedPanel
 
setExtraSouth(int) - Method in class PamView.JBufferedPanel
 
setExtraWest(int) - Method in class PamView.JBufferedPanel
 
setF1(double) - Method in class Filters.FilterDialog.BodePlot
 
setF2(double) - Method in class Filters.FilterDialog.BodePlot
 
setFeature(double[][]) - Method in class loc3d_Thode.GroupDetDataUnit
 
setFeature(double, int, int) - Method in class loc3d_Thode.GroupDetDataUnit
 
setFftData(Complex[]) - Method in class fftManager.FFTDataUnit
 
setFftHop(int) - Method in class fftManager.FFTDataBlock
 
setFftHop(int) - Method in class whistleClassifier.FragmentClassifierParams
 
setFfthop(int) - Method in class whistleClassifier.training.TrainingDataSet
 
setFfthop(int) - Method in class whistleClassifier.TrainingDataSet
 
setFftHop(int) - Method in class whistlesAndMoans.AbstractWhistleDataBlock
 
setFftHop(int) - Method in class whitesWhistleDetector.AbstractWhistleDataBlock
 
setFFTLength(int) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.OptionsBlock
 
setFFTLength(int) - Method in class clickDetector.WignerPlotdialog
 
setFftLength(int) - Method in class fftManager.FFTDataBlock
 
setFFTLength(int) - Method in interface fftManager.FFTLengthModeled
 
setFFTLength(int) - Method in class fftManager.FFTParametersDialog
 
setFftLength(int) - Method in class whistleClassifier.FragmentClassifierParams
 
setFftLength(int) - Method in class whistleClassifier.training.TrainingDataSet
 
setFftLength(int) - Method in class whistleClassifier.TrainingDataSet
 
setFftLength(int) - Method in class whistlesAndMoans.AbstractWhistleDataBlock
 
setFftLength(int) - Method in class whitesWhistleDetector.AbstractWhistleDataBlock
 
setFieldsSet(boolean) - Method in class rocca.RoccaClassifier
 
setFileDateText() - Method in class Acquisition.FolderInputSystem
 
setFileEndReason(int) - Method in class binaryFileStorage.BinaryFooter
 
setFileEndSample(long) - Method in class binaryFileStorage.BinaryFooter
 
setFileName(String) - Method in class offlineProcessing.OLProcessDialog.OLMonitor
 
setFileName(String) - Method in interface offlineProcessing.TaskMonitor
Set the current file name.
setFileName(String) - Method in class PamUtils.FileParts
 
setFileStartSample(long) - Method in class binaryFileStorage.BinaryHeader
 
setFileType(AudioFileFormat.Type) - Method in class SoundRecorder.RecorderSettings
 
setFill(boolean) - Method in class PamView.PamSymbol
 
setFillColor(Color) - Method in class PamView.PamSymbol
 
setFillColour(Color) - Method in class generalDatabase.lookupTables.LookupItem
 
setFillMode(int) - Method in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
setFilterMethod(FilterMethod) - Method in class Filters.IirfFilter
 
setFirstDataTime(long) - Method in class dataMap.OfflineDataMap
 
setFirstDataTime(long) - Method in class PamguardMVC.OfflineDataMap
 
setFirstDelay(int) - Method in class clickDetector.ClickLocalisation
 
setFirstDeleteIndex(long) - Method in class PamguardMVC.SaveRequirements
 
setFirstDeleteTime(long) - Method in class PamguardMVC.SaveRequirements
 
setFirstFile(File) - Method in class PamController.SettingsFileData
 
setFirstUpdateIndex(long) - Method in class PamguardMVC.SaveRequirements
 
setFirstUpdateTime(long) - Method in class PamguardMVC.SaveRequirements
 
setFitData(int, LatLong, LatLong, double, double, double, double, double, double) - Method in class Localiser.GroupDetection
 
setFitOrder(int) - Method in class angleMeasurement.AngleCalibration
 
setFixedLatLong(LatLong) - Method in class Array.PamArray
 
setFlowControl(FlowControl) - Method in class portcomms.SerialPortParameters
 
setFlowControl(int) - Method in class serialComms.SerialPortPanel
 
setFluxgateWorldParameters(FluxgateWorldParameters) - Method in class angleMeasurement.FluxgateWorldAngles
 
setFluxgateWorldParameters(FluxgateWorldParameters, boolean) - Method in class angleMeasurement.FluxgateWorldAngles
 
setFocalICIList(int) - Method in class loc3d_Thode.CrossStationMatcher
 
setFocalStation(StationQueue) - Method in class loc3d_Thode.CrossStationMatcher
 
setFocus(boolean) - Method in class likelihoodDetectionModule.CheckRenderer.TreeLabel
Sets the focus.
setFocusOnTextInput() - Method in class UserInput.UserInputPanel
 
setFolderInputParameters(FolderInputParameters) - Method in class Acquisition.FolderInputSystem
 
setFolderName(String) - Method in class PamUtils.SelectFolder
 
setFolderProgress() - Method in class Acquisition.FolderInputSystem
 
setFolderStatus(boolean) - Method in class SoundRecorder.RecorderControl
 
setForceFirstVal(boolean, double) - Method in class Layout.PamAxis
 
setForeground(Color) - Method in class PamView.KeyPanel.BPanel
 
setFormat(String) - Method in class Layout.PamAxis
Set the format string for writing out numbers on the axis.
setFormatStyle(int) - Static method in class PamUtils.LatLong
 
setFractionalScale(boolean) - Method in class Layout.PamAxis
 
setFragmentClassifier(Classifier) - Method in class whistleClassifier.WhistleClassifierControl
 
setFragmentLength(int) - Method in class whistleClassifier.FragmentClassifierParams
 
setFragmentLength(int) - Method in class whistleClassifier.OverlappingFragmenter
 
setFragmentLength(int) - Method in class whistleClassifier.WhistleFragmenter
 
setFragmentParameteriser(FragmentParameteriser) - Method in class whistleClassifier.WhistleClassifierControl
 
setFrame(PamInternalFrame) - Method in class Layout.PamFramePlots
 
setFrameName() - Method in class PamView.PamObjectViewer.ObjectFrame
 
setFrameNumber(int) - Method in class PamController.PamControlledUnit
 
setFrameNumber(int) - Method in class PamView.PamView
 
setFreqsHz(double[]) - Method in class whistleClassifier.training.TrainingContour
 
setFrequency(double) - Method in class likelihoodDetectionModule.EndFrequencyNode
 
setFrequency(double) - Method in class likelihoodDetectionModule.StartFrequencyNode
 
setFrequency(double[]) - Method in class PamDetection.AcousticDataUnit
 
setFrequencyHz(double[]) - Method in class whistleClassifier.TrainingContour
 
setFrequencyRange(double[]) - Method in class whistleClassifier.FragmentClassifierParams
 
setFrequencyResolution(double) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the frequency resolution.
setFullTablesCheck(boolean) - Method in class generalDatabase.DBControl
 
setGain(double) - Method in class Array.Preamplifier
 
setGPPStatus(int, int) - Static method in class backendCInterfase.BackendManager
 
setGpsCalendar(Calendar) - Method in class GPS.GpsData
 
setGpsDataBlock(PamDataBlock) - Method in class PamModel.PamModel
 
setGraphDimensions() - Method in class dataMap.DataMapPanel
Based on the scale and on the total length of data work out how big the little panels need to be
setGraphicsOverLayer(HistogramGraphicsLayer) - Method in class pamMaths.HistogramDisplay
 
setGraphicsUnderLayer(HistogramGraphicsLayer) - Method in class pamMaths.HistogramDisplay
 
setGraphVisible(boolean) - Method in class dataMap.DataStreamPanel
 
setGroupChannels(int) - Method in class whistleDetector.PeakDetector
 
setGroupChannels(int) - Method in class whistleDetector.WhistleLinker
 
setGrouping(int) - Method in class PamView.GroupedSourcePanel
 
setGroupingType(int) - Method in class PamView.GroupedSourceParameters
 
setGrowing(boolean) - Method in class whistlesAndMoans.ConnectedRegion
 
setGrowing(boolean) - Method in class whitesWhistleDetector.ConnectedRegion
 
setGstreamer() - Static method in class PamController.pamBuoyGlobals
 
setGuardBands(ArrayList<GuardBand>) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the guard bands.
setHalfLife(double) - Method in class angleVetoes.AngleVetoDisplay
 
setHandler(PanZoomBehaviour) - Method in class Map.DisplayPanZoom
 
setHasAngleAmbiguity(boolean) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setHasAngles(boolean) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setHasDepth(boolean) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setHasRanges(boolean) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setHeaderFormat(int) - Method in class binaryFileStorage.BinaryHeader
 
setHeaderLength(int) - Method in class binaryFileStorage.BinaryHeader
 
setHeading(double) - Method in class Array.Hydrophone
 
setHeading(double, int) - Method in class PamDetection.PamLocalisation
Deprecated.  
setHeading(double) - Method in class terrella.TerrellaStandardDataSetUnit
 
setHeadings(double[]) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setHeadings(double, int) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setHeadings(String[], String[]) - Method in class pamMaths.MatrixDialog
 
setHeadingType(int) - Method in class Array.PamArray
 
setHeight(double) - Method in class beakedWhaleProtocol.ShoreStationDataUnit
 
setHeight(int) - Method in class PamView.PamSymbol
 
setHeightDatas(ArrayList<VRHeightData>) - Method in class videoRangePanel.VRParameters
 
setHeldAngle(AngleDataUnit) - Method in class angleMeasurement.AngleDataBlock
 
setHelpPoint(String) - Method in class PamView.PamDialog
Sets the starting point for Java help.
setHelpURL(String) - Method in class tipOfTheDay.PamTip
 
setHorizonPoint1(Point) - Method in class videoRangePanel.VRControl
 
setHorizonPoint2(Point) - Method in class videoRangePanel.VRControl
 
setHorizonTilt(double) - Method in class videoRangePanel.VRControl
 
setHorzGrid(int) - Method in class clickDetector.dialogs.ClickDisplayDialog
 
setHwChannelList(int[]) - Method in class nidaqdev.NIDaqParams
 
setHWChannelList(int[]) - Method in class nidaqdev.NIDAQProcess
 
setHydrophoneDelays(double[][]) - Method in class simulatedAcquisition.SimSound
 
setHydrophoneList(int[]) - Method in class Acquisition.AcquisitionControl
Sets the list of hydrophone numbers.
setHydrophoneList(int[]) - Method in class Acquisition.AcquisitionParameters
Set a hydrophone list.
setHydrophoneMap(int[]) - Method in class Array.HydrophoneDialogPanel
 
setICI(int, double) - Method in class loc3d_Thode.StationQueue
 
setICI_err_thresh(double) - Method in class loc3d_Thode.CrossStationMatcher
 
setIconHorizontalAlignment(int) - Method in class PamView.PamSymbol
 
setIconStyle(int) - Method in class PamView.PamSymbol
 
setIconVerticalAlignment(int) - Method in class PamView.PamSymbol
 
setID(int) - Method in class Array.Hydrophone
 
setIdentifier(String) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the identifier.
setIFFTInitialArrayLength(int) - Method in class fftManager.FFT
Deprecated. Sets a variable used by the fft algorithm to hold intial input array length.
setImageAngle(Double) - Method in class videoRangePanel.VRControl
 
setImageBrightness(float, float) - Method in class videoRangePanel.VRControl
 
setImageBrightness(float, float) - Method in class videoRangePanel.VRPanel
 
setImageBrightness() - Method in class videoRangePanel.VRPanel
 
setImageName(String) - Method in class videoRangePanel.VRControl
 
setImageName() - Method in class videoRangePanel.VRSidePanel
 
setIncludeSubFolders(boolean) - Method in class PamUtils.SelectFolder
Set the state of the sub folder check box.
setInfo(long, int, long, long, int) - Method in class fftManager.FFTDataUnit
 
setInfo(long, int, long, long) - Method in class PamDetection.AcousticDataUnit
 
setInfo(long, int, long, long, float, float, long, double) - Method in class PamDetection.IshDetection
Set various parameters.
setInnerPanel(DisplayPanel.DisplayInnerPanel) - Method in class Layout.DisplayPanel
 
setInnerPanel(JPanel) - Method in class Layout.PamAxisPanel
 
setInputChannelList(int[], int) - Method in class asiojni.AsioJniInterface
 
setInstruction() - Method in class videoRangePanel.VRSidePanel
 
setIntegerText(JTextField, Integer) - Method in class clickDetector.offlineFuncs.OfflineEventDialog
 
setInterval - Variable in class angleMeasurement.AngleCalibrationDialog.CalibrationPanel
 
setInterval(double) - Method in class Layout.PamAxis
Set the interval between ticks.
setInUse(boolean) - Method in class likelihoodDetectionModule.LikelihoodFFTProcess
 
setIshmaelData(IshmaelData) - Method in class ishmaelComms.IshmaelDataUnit
 
setKernel(double[][]) - Method in class spectrogramNoiseReduction.kernelSmoothing.KernelSmoothing
 
setKeyPanel(KeyPanel) - Method in class PamView.JPanelWithPamKey
 
setKeyPosition(int) - Method in class PamView.JPanelWithPamKey
 
setKeyType(int) - Method in class PamView.KeyPanel
 
setLabel(String) - Method in class Layout.PamAxis
 
setLabelNames() - Method in class eventCounter.EventCounterSidePanel
 
setLabelPos(int) - Method in class Layout.PamAxis
 
setLandmarkData(LandmarkData) - Method in class landMarks.LandmarkDataUnit
 
setLastClickedMouseLatLong(LatLong) - Method in class Map.MapRectProjector
 
setLastDataTime(long) - Method in class dataMap.OfflineDataMap
 
setLastDataTime(long) - Method in class PamguardMVC.OfflineDataMap
 
setLastDeleteIndex(long) - Method in class PamguardMVC.SaveRequirements
 
setLastDeleteTime(long) - Method in class PamguardMVC.SaveRequirements
 
setLastFix(GpsData) - Method in class Map.GpsTextDisplay
 
setLastFocalICIList() - Method in class loc3d_Thode.CrossStationMatcher
 
setLastFocalWithEchoICIList() - Method in class loc3d_Thode.CrossStationMatcher
 
setLastGpsDataUnit(GpsDataUnit) - Method in class radardisplay.RadarDisplay
 
setLastUpdateIndex(long) - Method in class PamguardMVC.SaveRequirements
 
setLastUpdateTime(long) - Method in class PamguardMVC.PamDataUnit
 
setLastUpdateTime(long) - Method in class PamguardMVC.SaveRequirements
 
setLatestAngle(Double) - Method in class beakedWhaleProtocol.BeakedProcess
 
setLatestOfflineEvent(OfflineEventDataUnit) - Method in class clickDetector.ClickControl
 
setLatitude(double) - Method in class PamUtils.LatLong
 
setLatLinesPerDegree(double) - Method in class Map.StraightLineGrid
 
setLatLong(LatLong) - Method in class beakedWhaleProtocol.ShoreStationDataUnit
 
setLatLong() - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setLatLong(int, LatLong) - Method in class Localiser.GroupDetection
 
setLatLongDecimalPlaces(int) - Method in class NMEA.NMEAParameters
 
setLayout(CornerLayout) - Method in class PamView.JPanelWithPamKey
 
setLength(int) - Method in class generalDatabase.PamTableItem
 
setLineColor(Color) - Method in class PamView.PamDetectionOverlayGraphics
 
setLineColor(Color) - Method in class PamView.PamSymbol
 
setLineColour(Color) - Method in class PamView.PamDetectionOverlayGraphics
 
setLineThickness(float) - Method in class PamView.PamSymbol
 
setLinkGpsData(boolean) - Method in class PamguardMVC.PamDataBlock
 
setListAudio() - Static method in class PamController.pamBuoyGlobals
 
setListIterator(ListIterator<Tunit>) - Method in class PamguardMVC.DataUnitFinder
 
setListTopic(String) - Method in class generalDatabase.lookupTables.LookupList
 
setLoadStatus(int) - Method in interface PamguardMVC.LoadObserver
 
setLoadStatus(int) - Method in class soundPlayback.PlaybackControl.PlayLoadObserver
 
setLoadStatus(int) - Method in class Spectrogram.SpectrogramDisplay
 
setLoadViewData(boolean) - Method in class generalDatabase.SQLLogging
 
setLocalisation(AbstractLocalisation) - Method in class PamguardMVC.PamDataUnit
 
setLocalisationContents(int) - Method in class PamguardMVC.PamDataBlock
 
setLocalisationRequirements(int) - Method in class PamView.SourcePanel
 
setLocation(VRDataUnit) - Method in class beakedWhaleProtocol.BeakedControl
 
setLocations(LatLong, double, LatLong, double) - Method in interface propagation.PropagationModel
Set the locations of hydrophone and the source
setLocations(LatLong, double, LatLong, double) - Method in class propagation.SphericalPropagation
 
setLocations(LatLong, double, LatLong, double) - Method in class propagation.SurfaceEcho
 
setLocButton - Variable in class beakedWhaleProtocol.BeakedSidePanel
 
setLocContents(int) - Method in class PamDetection.AbstractLocalisation
 
setLogFile(File) - Method in class Logging.LogToFlatFile
 
SetLogging(SQLLogging) - Method in class PamguardMVC.PamDataBlock
 
setLoggingActive(boolean) - Method in class Logging.LogDataObserver
 
setLogScale(boolean) - Method in class Layout.PamAxis
 
setLogTenthsScale(boolean) - Method in class Layout.PamAxis
 
setLongitude(double) - Method in class PamUtils.LatLong
 
setLongLinesPerDegree(double) - Method in class Map.StraightLineGrid
 
setLowerLimit(double) - Method in class likelihoodDetectionModule.SignalNode
 
setMagneticHeading(Double) - Method in class GPS.GpsData
 
setMagneticVariation(Double) - Method in class GPS.GpsData
 
setMagXgauss(double) - Method in class terrella.TerrellaStandardDataSetUnit
 
setMagYgauss(double) - Method in class terrella.TerrellaStandardDataSetUnit
 
setMagZgause(double) - Method in class terrella.TerrellaStandardDataSetUnit
 
setMapCentreCoords(Coordinate3d) - Method in class Map.MapPanel
 
setMapCentreDegrees(LatLong) - Method in class Map.MapPanel
 
setMapCentreDegrees(LatLong) - Method in class Map.MapRectProjector
 
setMapContourPoints(ArrayList<MapContourValues>) - Method in class Map.MapContourGraphics
 
setMapDetectionsParameters(MapDetectionsParameters) - Method in class Map.MapDetectionsManager
 
setMapFile(File) - Method in class Map.MapParametersDialog.FilePanel
 
setMapFileManager(MapFileManager) - Method in class videoRangePanel.ShoreManager
 
setMapPanelRef(MapPanel) - Method in class Map.MapRectProjector
 
setMapRangeMetres(int) - Method in class Map.MapPanel
 
setMapRangeMetres(double) - Method in class Map.MapRectProjector
 
setMapRangeMetres(double) - Method in class Map.StraightLineGrid
 
setMapRotation(double) - Method in class Map.StraightLineGrid
 
setMapRotationDegrees(double) - Method in class Map.Compass
 
setMapRotationDegrees(double) - Method in class Map.MapPanel
 
setMapRotationDegrees(double) - Method in class Map.MapRectProjector
 
setMapZoom(float) - Method in class Map.MapPanel
 
setMasterDevice(int) - Method in class nidaqdev.NIDAQProcess
 
setMatrix(Matrix) - Method in class pamMaths.MatrixDialog
 
setMaxFrequency(double) - Method in class whistlesAndMoans.WhistleToneParameters
 
setMaxInputs(int) - Method in class asiojni.AsioJniInterface.AsioDriverSettings
 
setMaxMultiChannelRate(double) - Method in class nidaqdev.NIDeviceInfo
 
setMaxNumber(Short) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setMaxNumber(int) - Method in class PamModel.PamModuleInfo
Set the maximum number of instances of a given module.
setMaxSingleChannelRate(double) - Method in class nidaqdev.NIDeviceInfo
 
setMaxVal(double) - Method in class Layout.PamAxis
 
setMaxVal(double) - Method in class nidaqdev.Nidaq.DAQmxCreateAIVoltageChanParams
 
setMaxValue(double) - Method in class pamScrollSystem.RangeSpinner
 
setMeanTime(double) - Method in class rocca.RoccaContourDataUnit
 
setMeasuredAmplitude(double, int) - Method in class PamDetection.AcousticDataUnit
 
setMeasuredAmplitude(double) - Method in class PamDetection.AcousticDataUnit
 
setMeasuredAmplitudeType(int) - Method in class PamDetection.AcousticDataUnit
 
setMeasuredAngle(Double) - Method in class beakedWhaleProtocol.ShoreStationDataUnit
 
setMeasuredValues(double[]) - Method in class angleMeasurement.AngleCalibration
 
setMeasurementTimes(long) - Method in class noiseMonitor.NoiseProcess
Work out a new set of measurement times.
setMeasurementType(int) - Method in class videoRangePanel.VRControl
 
setMemory(double) - Method in class clickDetector.TriggerFilter
 
setMenuItem(JMenu) - Method in class PamModel.ModulesMenuGroup
 
setMenuName(String) - Method in class PamModel.ModulesMenuGroup
 
setMethod() - Method in class videoRangePanel.VRParametersDialog.CalcPanel
 
setMinEast(int) - Method in class Layout.PamAxisPanel
 
setMinFrequency(double) - Method in class whistlesAndMoans.WhistleToneParameters
 
setMinICI(int) - Method in class loc3d_Thode.StationQueue
 
setMinNorth(int) - Method in class Layout.PamAxisPanel
 
setMinNumber(Short) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setMinNumber(int) - Method in class PamModel.PamModuleInfo
Set the minumnum number of instances of a particular module.
setMinSouth(int) - Method in class Layout.PamAxisPanel
 
setMinVal(double) - Method in class Layout.PamAxis
 
setMinVal(double) - Method in class nidaqdev.Nidaq.DAQmxCreateAIVoltageChanParams
 
setMinWest(int) - Method in class Layout.PamAxisPanel
 
setMixedDirection(int) - Method in class PamguardMVC.PamDataBlock
 
setModule(String) - Method in class tipOfTheDay.PamTip
 
setModuleFooter(ModuleFooter) - Method in class binaryFileStorage.BinaryOfflineDataMapPoint
 
setModuleHeader(ModuleHeader) - Method in class binaryFileStorage.BinaryOfflineDataMapPoint
 
setModuleName(String) - Method in class binaryFileStorage.BinaryHeader
 
setModulePosition(PamControlledUnit, int) - Method in class PamController.PamController
Sets the position of a particular PamControlledUnit in the list.
setModulesMenuGroup(ModulesMenuGroup) - Method in class PamModel.PamModuleInfo
 
setModuleStatus(int, int) - Method in class backendCInterfase.BackendManager
 
setModuleType(String) - Method in class binaryFileStorage.BinaryHeader
 
setMouseClickLatLong(LatLong) - Static method in class Map.MapController
 
setMouseMoveAction(int) - Method in class Map.MapController
 
setMousePosition(Point) - Method in class fftManager.FFTPluginPanelProvider.FFTPluginPanel
 
setMouseX(double) - Method in class Map.GpsTextDisplay
 
setMouseY(double) - Method in class Map.GpsTextDisplay
 
setMultithreading(boolean) - Method in class PamModel.PamModel
Set multithreading for all of PAMGUARD.
setName(String) - Method in class angleMeasurement.AngleMeasurement
 
setName(String) - Method in class clickDetector.NewClickOverlayGraphics
 
setName(String) - Method in class eventCounter.DataCounter
 
setName(String) - Method in class fftManager.FFTParameters
 
setName(String) - Method in class generalDatabase.PamTableItem
 
setName(String) - Method in class IshmaelDetector.IshDetParams
 
setName(String) - Method in class IshmaelLocator.IshLocParams
 
setName(String) - Method in class listening.SpeciesItem
 
setName(String) - Method in class NMEA.NMEAParameters
 
setName(String) - Method in class PamguardMVC.Annotation
 
setName(String) - Method in class pamMaths.PamHistogram
 
setNaturalLifetime(int) - Method in class PamguardMVC.PamDataBlock
Set the natural lifetime of the data if there are no observers asking to keep it for longer
setNaturalLifetimeMillis(int) - Method in class PamguardMVC.PamDataBlock
 
setNBootstrap(int) - Method in class whistleClassifier.FragmentClassifierParams
 
setNChannels(int) - Method in class Acquisition.AcquisitionParameters
 
setNClicks(int) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setNDatas(int) - Method in class dataMap.OfflineDataMapPoint
 
setNDatas(int) - Method in class PamguardMVC.OfflineDataMapPoint
 
setNeedsUpdate(boolean) - Method in class binaryFileStorage.DataUnitFileInformation
 
setNetworkCont() - Static method in class PamController.pamBuoyGlobals
 
setNetworkControlPort(int) - Static method in class PamController.pamBuoyGlobals
 
setNewError(double) - Method in class Array.EnvironmentPanel
 
setNewFile(String) - Method in class Acquisition.FileInputSystem
 
setNewSpeed(double) - Method in class Array.EnvironmentPanel
 
setNextLogTime(AngleLoggingParameters, long) - Method in class angleMeasurement.AngleDataBlock
 
setNFragments(int) - Method in class whistleClassifier.WhistleClassificationDataUnit
 
setNightTime(boolean) - Method in class PamView.ColorSettings
 
setNightTime() - Method in class PamView.PamColors
 
setNInstances(int) - Method in class PamModel.PamModuleInfo
 
setNJoinedEnd(int) - Method in class whistlesAndMoans.ConnectedRegion
 
setNJoinedStart(int) - Method in class whistlesAndMoans.ConnectedRegion
 
setNoiseBandData(double[][]) - Method in class noiseMonitor.NoiseDataUnit
 
setNoiseSettings(SpectrogramNoiseSettings) - Method in class spectrogramNoiseReduction.SpectrogramNoiseProcess
 
setNorthAxis(PamAxis) - Method in class Layout.PamAxisPanel
 
setNorthPanel(Component) - Method in class Layout.PamFramePlots
 
setNorthTitle(String) - Method in class generalDatabase.lookupTables.LookupComponent
 
setNullData(PamTableItem) - Method in class generalDatabase.PamDetectionLogging
 
setNullData(PamTableItem[]) - Method in class generalDatabase.PamDetectionLogging
 
setNumAdditions(int) - Method in class PamguardMVC.SaveRequirements
 
setNumChannels(int) - Method in class Acquisition.AcquisitionProcess
 
setNumChannels(int, int[]) - Method in class Acquisition.AcquisitionProcess
Set up channels when using a channel list - note that hardware channels are no longer passed through the system so software channels are now used throughout.
setNumChannels(int) - Method in interface Acquisition.ChannelListPanel
Set the total number of channels to display.
setNumChannels(int) - Method in class Acquisition.StandardChannelListPanel
 
setNumChannels(int) - Method in class nidaqdev.NIChannelListPanel
 
setNumFiles(int) - Method in class offlineProcessing.OLProcessDialog.OLMonitor
 
setNumFiles(int) - Method in interface offlineProcessing.TaskMonitor
Set the total number of files to process (will be one if only loaded data are being processed).
setNumLatLong(int) - Method in class Localiser.GroupDetection
 
setNumUpdates(int) - Method in class PamguardMVC.SaveRequirements
 
setOfflineFileParameters(OfflineFileParameters) - Method in class Acquisition.offlineFuncs.OfflineFileServer
 
setOfflineParameters(OfflineParameters) - Method in class clickDetector.offlineFuncs.ClicksOffline
 
setOffset(long, int) - Method in class Spectrogram.SpectrogramProjector
Set the x and the time offset
setOnNextString - Variable in class GPS.UpdateClockDialog
 
setOrder(int) - Method in class generalDatabase.lookupTables.LookupItem
 
setOriginLatLong(int, LatLong) - Method in class Localiser.GroupDetection
 
setOriginLatLong(LatLong) - Method in class PamguardMVC.PamDataUnit
 
setOutputDataName() - Method in class KernelSmoothing.KernelSmoothingControl
 
setOverlayDraw(PanelOverlayDraw) - Method in class PamguardMVC.PamObservable
 
setOwner(Object) - Method in class PamguardMVC.Annotation
 
setPageStep(int) - Method in class pamScrollSystem.AbstractPamScroller
 
setPamController(PamController) - Method in class PamController.PamControlledUnit
 
setPamguardBranch(String) - Method in class binaryFileStorage.BinaryHeader
 
setPamguardVersion(String) - Method in class binaryFileStorage.BinaryHeader
 
setPamModuleInfo(PamModuleInfo) - Method in class PamController.PamControlledUnit
 
setPamProcess(PamProcess) - Method in class PamguardMVC.Annotation
 
setPamStatus(int) - Method in class PamController.PamController
 
setPamSymbol(PamSymbol) - Method in class AIS.AISGraphics
 
setPamSymbol(PamSymbol) - Method in class listening.ListeningEffortGraphics
 
setPamSymbol(PamSymbol) - Method in class listening.ThingHeardGraphics
 
setPamSymbol(PamSymbol) - Method in interface PamView.ManagedSymbol
 
setPamSymbol(PamSymbol) - Method in class PamView.PamDetectionOverlayGraphics
 
setPamSymbol(PamSymbol) - Method in class PamView.SymbolSettingsStoreUnit
 
setPamSymbol(PamSymbol) - Method in class simulatedAcquisition.SimGraphics
 
setPamSymbol(PamSymbol) - Method in class videoRangePanel.VRPanel.VRSymbolManager
 
setPamView(PamView) - Method in class dataMap.DataMapControl
 
setPamView(PamView) - Method in class PamController.PamControlledUnit
Called whenever the frme of a PamControlledunit changes (including at program startup).
setPanelBorder(Insets) - Method in class Layout.DisplayPanel
 
setPanelHeight(double) - Method in class Map.MapRectProjector
 
setPanelHeight(int) - Method in class Map.StraightLineGrid
 
setPanelInsets() - Method in class dataMap.ScrollingDataPanel
 
setPanelWidth(int) - Method in class Map.Compass
 
setPanelWidth(double) - Method in class Map.MapRectProjector
 
setPanelWidth(int) - Method in class Map.StraightLineGrid
 
setParallelError(int, double) - Method in class Localiser.GroupDetection
 
setParameters(BasicClickIdParameters, float) - Method in class clickDetector.ClickClassifiers.ClickTypesDialog
 
setParameters() - Method in class fftManager.FFTParametersDialog
 
setParameters() - Method in class IshmaelDetector.EnergySumParamsDialog
 
setParameters() - Method in class IshmaelDetector.IshDetParamsDialog
 
setParameters() - Method in class IshmaelDetector.MatchFiltParamsDialog
 
setParameters() - Method in class IshmaelDetector.SgramCorrParamsDialog
 
setParameters() - Method in class IshmaelLocator.IshLocHyperbParamsDialog
 
setParameters() - Method in class IshmaelLocator.IshLocParamsDialog
 
setParams() - Method in class Acquisition.AcquisitionDialog
 
setParams(int[]) - Method in interface Acquisition.ChannelListPanel
Set the channel list.
setParams() - Method in class Acquisition.CheckWavFileHeaders
 
setParams() - Method in class Acquisition.offlineFuncs.OfflineDAQDialogPanel
 
setParams(int[]) - Method in class Acquisition.StandardChannelListPanel
 
setParams() - Method in class AirgunDisplay.AirgunParametersDialog.ExclusionPanel
 
setParams() - Method in class AirgunDisplay.AirgunParametersDialog
 
setParams() - Method in class AirgunDisplay.AirgunParametersDialog.ShipIDPanel
 
setParams() - Method in class AIS.AISDisplayDialog
 
setParams() - Method in class AIS.AISSettingsDialog
 
setParams() - Method in class amplifier.AmpDialog
 
setParams() - Method in class angleMeasurement.AngleCalibrationDialog.CalibrationPanel
 
setParams() - Method in class angleMeasurement.AngleCalibrationDialog
 
setParams(AngleLoggingParameters) - Method in class angleMeasurement.AngleLoggingDialogPanel
 
setParams() - Method in class angleMeasurement.FluxgateWorldDialog
 
setParams() - Method in class angleVetoes.AngleVetoDialog
 
setParams() - Method in class angleVetoes.AngleVetoesDialog
 
setParams(PamArray) - Method in class Array.ArrayDialog
 
setParams() - Method in class Array.ChannelPanel
 
setParams(PamArray) - Method in class Array.HydrophoneDialogPanel
 
setParams() - Method in class Array.HydrophoneElementDialog.CoordinatePanel
 
setParams() - Method in class Array.HydrophoneElementDialog.GeneralPanel
 
setParams() - Method in class Array.HydrophoneElementDialog.SensitivityPanel
 
setParams() - Method in class Array.HydrophoneElementDialog
 
setParams() - Method in class Array.StreamerDialog
 
setParams() - Method in class beakedWhaleProtocol.BeakedDialog
 
setParams() - Method in class beakedWhaleProtocol.BeakedLocationDialog
 
setParams() - Method in class binaryFileStorage.BinaryStorageDialog
 
setParams(BinaryStoreSettings) - Method in class binaryFileStorage.BinaryStorageDialogPanel
 
setParams() - Method in class clickDetector.ClickClassifiers.basic.BasicIdentifierPanel
 
setParams(ClickTypeParams) - Method in class clickDetector.ClickClassifiers.basic.ClickTypeDialog
 
setParams() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.EnergyBandsBlock
 
setParams() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.IdBlock
 
setParams() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.LengthBlock
 
setParams() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.OptionsBlock
 
setParams() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.PeakFreqBlock
 
setParams() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog
 
setParams() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.ZeroXBlock
 
setParams() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierPanel
 
setParams() - Method in interface clickDetector.ClickClassifiers.ClassifyDialogPanel
 
setParams() - Method in class clickDetector.ClickClassifiers.ClickClassifyDialog
 
setParams() - Method in class clickDetector.ClickSpectrumDialog
 
setParams(BTDisplayParameters) - Method in class clickDetector.dialogs.ClickDisplayDialog.BTPanel
 
setParams(BTDisplayParameters) - Method in class clickDetector.dialogs.ClickDisplayDialog
 
setParams(BTDisplayParameters) - Method in class clickDetector.dialogs.ClickDisplayDialog.SizePanel
 
setParams(BTDisplayParameters) - Method in class clickDetector.dialogs.ClickDisplayDialog.SpeciesPanel
 
setParams(ClickParameters) - Method in class clickDetector.dialogs.ClickMapDialog
 
setParams() - Method in class clickDetector.dialogs.ClickParamsDialog.NoisePanel
 
setParams(ClickParameters) - Method in class clickDetector.dialogs.ClickParamsDialog
 
setParams(ClickParameters) - Method in class clickDetector.dialogs.ClickStorageOptionsDialog
 
setParams(ClickParameters) - Method in class clickDetector.dialogs.ClickTrainIdDialog
 
setParams() - Method in class clickDetector.dialogs.WaveDisplayDialog
 
setParams() - Method in class clickDetector.offlineFuncs.BatchFileConversion
 
setParams() - Method in class clickDetector.offlineFuncs.EventListDialog
 
setParams() - Method in class clickDetector.offlineFuncs.LabelClicksDialog
 
setParams() - Method in class clickDetector.offlineFuncs.OfflineEventDialog
 
setParams() - Method in class clickDetector.offlineFuncs.OfflineReanalDialog
 
setParams() - Method in class clickDetector.WignerPlotdialog
 
setParams(DataMapParameters) - Method in class dataMap.ScalePanel
 
setParams() - Method in class decimator.DecimatorParamsDialog
 
setParams() - Method in class depthReadout.DepthDialog.DevicePanel
 
setParams() - Method in class depthReadout.DepthDialog
 
setParams() - Method in class depthReadout.MccDialog.BoardPanel
 
setParams() - Method in class depthReadout.MccDialog.SensorPanel
 
setParams() - Method in class depthReadout.MccDialog.SensorsPanel
 
setParams() - Method in class depthReadout.MccDialog
 
setParams(EdgeParameters) - Method in class EdgeDetector.EdgeParamsDialog
 
setParams() - Method in class fftManager.FFTPluginParamsDialog
 
setParams() - Method in class Filters.FilterDialog
 
setParams(int, FilterParams, float) - Method in class Filters.IirfFilter
 
setParams(FilterParams) - Method in class Filters.IirfFilter
 
setParams() - Method in class generalDatabase.DBDialog
 
setParams() - Method in class generalDatabase.MSAccessDialogPanel
 
setParams() - Method in class generalDatabase.MySQLDialogPanel
 
setParams() - Method in interface generalDatabase.SystemDialogPanel
 
setParams(GPSParameters) - Method in class GPS.GPSParametersDialog.HeadingPanel
 
setParams() - Method in class GPS.GPSParametersDialog.MainStringPanel
 
setParams() - Method in class GPS.GPSParametersDialog.PredictPanel
 
setParams() - Method in class GPS.GPSParametersDialog.ReadOptions
 
setParams() - Method in class GPS.GPSParametersDialog
 
setParams(PamDataBlock) - Method in class KernelSmoothing.KernelSmoothingDialog
 
setParams() - Method in class landMarks.LandmarkDialog
 
setParams(LikelihoodDetectionParameters) - Method in class likelihoodDetectionModule.LikelihoodDetectionParametersDialog
Populate the dialog with the values from the persistent parameters.
setParams() - Method in class listening.ListeningDialog
 
setParams() - Method in class loc3d_Thode.TowedArray3DParametersDialog
 
setParams(MapComment) - Method in class Map.MapCommentDialog
 
setParams(MapParameters) - Method in class Map.MapParametersDialog
 
setParams(int[]) - Method in class nidaqdev.NIChannelListPanel
 
SetParams(NMEAParameters) - Method in class NMEA.NMEAParametersDialog
 
setParams() - Method in class NMEA.NMEASimDialog
 
setParams() - Method in class nmeaEmulator.TimesDialog
 
setParams() - Method in class noiseMonitor.NoiseDialog
 
setParams() - Method in class noiseMonitor.NoiseDisplayDialog
 
setParams() - Method in class noiseMonitor.NoiseTabPanel.StatsSelectionPanel
 
setParams(FFTDataBlock) - Method in class noiseMonitor.ResolutionPanel
 
setParams() - Method in class noiseMonitor.UserBandDialog
 
setParams() - Method in class offlineProcessing.OLProcessDialog
 
setParams() - Method in class PamController.NewModuleDialog
 
setParams() - Method in class PamController.SettingsFileDialog
 
setParams() - Method in class PamModel.ThreadingDialog
 
setParams(AbstractPamScroller) - Method in class pamScrollSystem.LoadOptionsDialog
 
setParams(GroupedSourceParameters) - Method in class PamView.GroupedSourcePanel
 
setParams() - Method in class PamView.ViewTimesDialog
 
setParams() - Method in class patchPanel.PatchPanelDialog
 
setParams() - Method in class radardisplay.RadarParametersDialog.DetectorsPanel
 
setParams() - Method in class radardisplay.RadarParametersDialog.ScalePanel
 
setParams() - Method in class radardisplay.RadarParametersDialog
 
setParams() - Method in class radardisplay.RadarParametersDialog.StylePanel
 
setParams() - Method in class rocca.RoccaParametersDialog
 
setParams() - Method in class seismicVeto.VetoParametersDialog
 
setParams(SimParameters) - Method in class simulatedAcquisition.SimDialogPanel
 
setParams() - Method in class simulatedAcquisition.SimObjectDialog
 
setParams(PlaybackParameters) - Method in class soundPlayback.ASIOPlaybackDialogComponent
 
setParams(PlaybackParameters) - Method in class soundPlayback.FilePlaybackDialogComponent
 
setParams(PlaybackParameters) - Method in class soundPlayback.PlaybackDialog.EmptyDialogComponent
 
setParams() - Method in class soundPlayback.PlaybackDialog
 
setParams(PlaybackParameters) - Method in class soundPlayback.PlaybackDialogComponent
Set the parameters in the dialog component
setParams(PlaybackParameters) - Method in class soundPlayback.soundCardDialogComponent
 
setParams() - Method in class SoundRecorder.RecorderSettingsDialog.AutoPanel
 
setParams() - Method in class SoundRecorder.RecorderSettingsDialog.BufferPanel
 
setParams() - Method in class SoundRecorder.RecorderSettingsDialog.FileLengthPanel
 
setParams() - Method in class SoundRecorder.RecorderSettingsDialog.OutputFormat
 
setParams() - Method in class SoundRecorder.RecorderSettingsDialog
 
setParams(SpectrogramParameters) - Method in class Spectrogram.SpectrogramDisplay
 
setParams(Serializable) - Method in class spectrogramNoiseReduction.averageSubtraction.AverageSubtraction
 
setParams() - Method in class spectrogramNoiseReduction.averageSubtraction.AverageSubtractionDialogBits
 
setParams(Serializable) - Method in class spectrogramNoiseReduction.kernelSmoothing.KernelSmoothing
 
setParams() - Method in class spectrogramNoiseReduction.medianFilter.MedianFilterDialogBits
 
setParams(Serializable) - Method in class spectrogramNoiseReduction.medianFilter.SpectrogramMedianFilter
 
setParams() - Method in interface spectrogramNoiseReduction.SpecNoiseDialogComponent
 
setParams(Serializable) - Method in class spectrogramNoiseReduction.SpecNoiseMethod
Set the params for this method - will check class is OK before casting.
setParams() - Method in class spectrogramNoiseReduction.SpectrogramNoiseDialog
 
setParams(SpectrogramNoiseSettings) - Method in class spectrogramNoiseReduction.SpectrogramNoiseDialogPanel
 
setParams(Serializable) - Method in class spectrogramNoiseReduction.threshold.SpectrogramThreshold
 
setParams() - Method in class spectrogramNoiseReduction.threshold.ThresholdDialogComponent
 
setParams(SerialPortParameters) - Method in class terrella.SerialParametersDialogPanel
 
setParams(TerrellaParameters) - Method in class terrella.TerrellaParametersDialog
 
setParams(TerrellaParameters) - Method in class terrella.TerrellaParametersDialog.SourcePanel
 
setParams() - Method in class terrella.TerrellaParametersDialog.TerrellaDimensions
 
setParams() - Method in class tipOfTheDay.PamTipViewer
 
setParams() - Method in class videoRangePanel.AcceptMeasurementDialog
 
setParams() - Method in class videoRangePanel.HeightDialog
 
setParams() - Method in interface videoRangePanel.RangeDialogPanel
 
setParams() - Method in class videoRangePanel.RefractionMethod.RefractionDialogPanel
 
setParams() - Method in class videoRangePanel.VRCalibrationDialog
 
setParams() - Method in class videoRangePanel.VRParametersDialog.AnglesPanel
 
setParams() - Method in class videoRangePanel.VRParametersDialog.CalcPanel
 
setParams() - Method in class videoRangePanel.VRParametersDialog.CalibrationPanel
 
setParams() - Method in class videoRangePanel.VRParametersDialog.HeightPanel
 
setParams() - Method in class videoRangePanel.VRParametersDialog.ImagePanel
 
setParams() - Method in class videoRangePanel.VRParametersDialog
 
setParams() - Method in class videoRangePanel.VRParametersDialog.ShorePanel
 
setParams(FragmentClassifierParams) - Method in class whistleClassifier.ClassifierInfoArea
 
setParams() - Method in class whistleClassifier.ClassifierTrainingDialog
 
setParams() - Method in class whistleClassifier.training.ClassifierTrainingDialog.RunTrainingPanel
 
setParams() - Method in class whistleClassifier.training.ClassifierTrainingDialog
 
setParams() - Method in class whistleClassifier.WhistleClassificationDialog.RunningPanel
 
setParams() - Method in class whistleClassifier.WhistleClassificationDialog.RunOptsPanel
 
setParams() - Method in class whistleClassifier.WhistleClassificationDialog
 
setParams() - Method in class whistleClassifier.WhistleClassificationDialog.SpeciesPanel
 
setParams() - Method in class whistleClassifier.WhistleClassificationDialog.TrainingPanel
 
setParams(WhistleParameters) - Method in class whistleDetector.WhistleParametersDialog.EventPanel
 
setParams(WhistleParameters) - Method in class whistleDetector.WhistleParametersDialog.LinkPanel
 
setParams(WhistleParameters) - Method in class whistleDetector.WhistleParametersDialog.PeakPanel
 
setParams(WhistleParameters) - Method in class whistleDetector.WhistleParametersDialog
 
setParams(WhistleParameters) - Method in class whistleDetector.WhistleParametersDialog.WhistlePanel
 
setParams() - Method in class whistlesAndMoans.WhistleToneDialog
 
setParams() - Method in class whitesWhistleDetector.WhitesDialog
 
setParams() - Method in class WorkshopDemo.WorkshopParametersDialog
 
setParentComponent(Component) - Method in class PamView.ScrollableBufferedImage
 
setParentDataBlock(PamDataBlock) - Method in class IshmaelDetector.IshPeakProcess
 
setParentDataBlock(PamDataBlock) - Method in class IshmaelLocator.IshLocProcess
 
setParentDataBlock(PamDataBlock) - Method in class KernelSmoothing.KernelSmoothingProcess
 
setParentDataBlock(PamDataBlock) - Method in class PamguardMVC.PamDataUnit
 
setParentDataBlock(PamDataBlock) - Method in class PamguardMVC.PamProcess
Set a parent data block with the default options of rethreading if set
setParentDataBlock(PamDataBlock, boolean) - Method in class PamguardMVC.PamProcess
Set a parent data block for the process with the option to rethread the data exchange process.
setParentDataBlock(FFTDataBlock) - Method in class spectrogramNoiseReduction.SpectrogramNoiseProcess
 
setParentDetection(PamDetection) - Method in class PamDetection.AbstractLocalisation
 
setParity(Parity) - Method in class portcomms.SerialPortParameters
 
setParity(int) - Method in class serialComms.SerialPortPanel
 
setParmeterType(int, GeneralProjector.ParameterType) - Method in class PamView.GeneralProjector
Sets the parameter type for a specific data type required by Coordinate3d
setParmeterUnits(int, GeneralProjector.ParameterUnits) - Method in class PamView.GeneralProjector
Sets the parameter unit for a specific data type required by Coordinate3d
setPeakFreq(double) - Method in class rocca.RoccaContourDataUnit
 
setPeakHeight(double) - Method in class PamDetection.IshDetection
 
setPeakTime(double) - Method in class PamDetection.PamDetection
 
setPercentICIErrorTOL(double) - Method in class loc3d_Thode.StationQueue
 
setPerpendicularError(int, double) - Method in class Localiser.GroupDetection
 
setPitch(double) - Method in class terrella.TerrellaStandardDataSetUnit
 
setPixelsPerMetre(double) - Method in class Map.GpsTextDisplay
 
setPixelsPerMetre(double) - Method in class Map.MapPanel
 
setPixelsPerMetre(double) - Method in class Map.MapRectProjector
 
setPixelsPerMetre(double) - Method in class Map.StraightLineGrid
 
setPixelsPerMetre(double) - Method in class Map.Vessel
 
setPlaybackChannels(int[]) - Method in class asiojni.AsioJniInterface
 
setPlaybackProgress(long) - Method in class soundPlayback.PlaybackControl
 
setPlotPanel(JComponent) - Method in class Layout.PamAxisPanel
 
setPlotPanel(Component) - Method in class Layout.PamFramePlots
 
setPlotPanel(JPanel) - Method in class performanceTests.PerformanceWindow
 
setPlotSizes() - Method in class Spectrogram.ScalePanel
 
setPort(String) - Method in class serialComms.SerialPortPanel
 
setPosition(int, int, int, int) - Method in class Layout.PamAxis
Set the axis default coordinates
setPosition(double, double) - Method in class terrella.TerrellaDataBlock
 
setPreampGain(double) - Method in class Array.Hydrophone
 
setPreamplifier(Preamplifier) - Method in class Acquisition.AcquisitionParameters
 
setPredictionArrow(int) - Method in class Map.Vessel
 
setPreferredSize(Dimension) - Method in class Map.GpsTextDisplay
 
setPressed(boolean) - Method in class SoundRecorder.RecorderButton
 
setPressedColour() - Method in class SoundRecorder.RecorderButton
 
setPressure(double) - Method in class terrella.TerrellaStandardDataSetUnit
 
setPrimaryKey(boolean) - Method in class generalDatabase.PamTableItem
 
setPrintJobName(String) - Method in class PamView.ClipboardCopier
 
setProcessName(String) - Method in class PamguardMVC.PamProcess
 
setProcessTime(int) - Method in class offlineProcessing.OfflineTaskGroup
 
setProgress(FileMapProgress) - Method in class Acquisition.offlineFuncs.FileMapMakingdialog
 
setProgress(BinaryMapMakeProgress) - Method in class binaryFileStorage.BinaryMapMakingDialog
 
setProgress(EmulationProgress) - Method in class nmeaEmulator.InfoPanel
 
setProgress(EmulationProgress) - Method in class nmeaEmulator.NMEAOutdialog
 
setProgress(int, double) - Method in class offlineProcessing.OLProcessDialog.OLMonitor
 
setProgress(int, double) - Method in interface offlineProcessing.TaskMonitor
Set the overall task progress
setProgress(long, double) - Method in interface soundPlayback.PlaybackProgressMonitor
Notify progress during playback in viewer mode.
setProgress(long, double) - Method in class Spectrogram.SpectrogramDisplay.PlayProgress
 
setProgress(int) - Method in class whistleClassifier.training.ClassifierTrainingDialog.ProgressPanel
 
setProgress(int) - Method in interface whistleClassifier.training.ProgressInformation
 
setProgressInfo(CheckWavFileHeaders.ProgressData) - Method in class Acquisition.CheckWavFileHeaders
 
setProgressLimits(int, int) - Method in class whistleClassifier.training.ClassifierTrainingDialog.ProgressPanel
 
setProgressLimits(int, int) - Method in interface whistleClassifier.training.ProgressInformation
 
setPropagationModel(PropagationModel) - Method in class simulatedAcquisition.SimProcess
 
setQueue_maxtime(long) - Method in class loc3d_Thode.StationQueue
 
setRadarParameters(RadarParameters) - Method in class radardisplay.RadarProjector
 
setRange(double, double) - Method in class Layout.PamAxis
Set the minimum and maximum values for the axis.
setRange(int, double) - Method in class Localiser.GroupDetection
 
setRange(int, double[]) - Method in class nidaqdev.NIChannelListPanel
 
setRange(double, int) - Method in class PamDetection.PamLocalisation
Deprecated.  
setRange(double, double, int) - Method in class pamMaths.PamHistogram
Sets the histogram bin ranges.
setRangeMillis(long, long, boolean) - Method in class pamScrollSystem.AbstractPamScroller
Set the range of the currently loaded data and optionally noitify other scrollers.
setRanges(double[]) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setRanges(double, int) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setRate(double) - Method in class nidaqdev.Nidaq.DAQmxCfgSampClkTimingParams
 
setRawdata(double[]) - Method in class loc3d_Thode.GroupDetDataUnit
 
setRawData(int, double[]) - Method in class loc3d_Thode.StationQueue
 
setRawData(double[]) - Method in class PamDetection.RawDataUnit
 
setRawData(double[], boolean) - Method in class PamDetection.RawDataUnit
 
setRawDepthData(double[]) - Method in class depthReadout.DepthDataUnit
 
setRecordActive(boolean) - Method in class asiojni.AsioJniInterface
 
setRecorderStatus(int) - Method in class SoundRecorder.RecorderControl
 
setRecorderStatus() - Method in class SoundRecorder.RecorderControl
Works out what the record status should be - the buttons only apply to local control, even if the off button is presses, it may be that a recording is being initiated by some other part of the system.
setRecorderTriggerData(RecorderTriggerData) - Method in class PamController.NetworkController.NetworkRecorderTrigger
 
setRecordingInfo(RecordingInfo) - Method in class SoundRecorder.RecorderDataUnit
 
setRecordStatus(int, String) - Method in class SoundRecorder.RecorderProcess
 
setRectProj(MapRectProjector) - Method in class Map.MapPanel
 
setRecycle(boolean) - Method in class fftManager.FFTDataBlock
 
setRecycling(boolean) - Method in class PamguardMVC.PamDataBlock
 
setRecyclingStoreLength(int) - Method in class PamguardMVC.PamDataBlock
 
setReferenceBearing(double) - Method in class clickDetector.ClickTrainLocalisation
 
setReferenceChannels(int, int) - Method in class Localiser.GroupDetection
 
setReferenceHeading(int, double) - Method in class Localiser.GroupDetection
 
setReferenceHydrophones(int) - Method in class clickDetector.ClickDetection
 
setReferenceHydrophones(int) - Method in class PamDetection.AbstractLocalisation
 
setRefLatLong(LatLong, String) - Static method in class Map.MasterReferencePoint
 
setRepeatCount(int) - Method in class Layout.RepeatedAxis
 
setRequired(boolean) - Method in class generalDatabase.PamTableItem
 
setResolution(double) - Method in class likelihoodDetectionModule.FrequencyResolutionNode
 
setResolution(double) - Method in class likelihoodDetectionModule.TimeResolutionNode
 
setRmsAmplitude() - Method in class whistlesAndMoans.SliceData
 
setRoll(double) - Method in class terrella.TerrellaStandardDataSetUnit
 
setRowHeight(int) - Method in class likelihoodDetectionModule.TreeTable
Overridden to pass the new rowHeight to the tree.
setRowHeight(int) - Method in class likelihoodDetectionModule.TreeTable.TreeTableCellRenderer
Sets the row height of the tree, and forwards the row height to the table.
setRunMethod(int, boolean) - Method in class spectrogramNoiseReduction.SpectrogramNoiseSettings
 
setSampleMode(int) - Method in class nidaqdev.Nidaq.DAQmxCfgSampClkTimingParams
 
setSampleRate(float) - Method in class Acquisition.AcquisitionDialog
Called by the specific DaqSystem to set sample rate when it is set by the DaqSystem (for instance FileInputSystem will set sample rate to the sample rate of data in the current file.
setSampleRate(float) - Method in class Acquisition.AcquisitionParameters
 
setSampleRate(float, boolean) - Method in class Acquisition.AcquisitionProcess
 
setSampleRate(float, boolean) - Method in class Array.ArrayManager
 
setSampleRate(float, boolean) - Method in class Array.StraightHydrophoneLocator
 
setSampleRate(int) - Method in class asiojni.AsioJniInterface.AsioDriverSettings
 
setSampleRate(float, boolean) - Method in class beakedWhaleProtocol.BeakedLocationDialog
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickBTDisplay
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickDetector.NewClickMonitor
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickDetector
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickSidePanel
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickSpectrogramPlugin.BTDisplayPanel
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickSpectrum
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickTrainDetector
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickTrigger
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickWaveform
 
setSampleRate(float, boolean) - Method in class clickDetector.offlineFuncs.EventListDialog.EventObserver
 
setSampleRate(float, boolean) - Method in class decimator.DecimatorProcess
 
setSampleRate(float, boolean) - Method in class depthReadout.DepthSidePanel
 
setSampleRate(float, boolean) - Method in class eventCounter.DataCounter
 
setSampleRate(float, boolean) - Method in class fftManager.FFTPluginPanelProvider.FFTPluginPanel
 
setSampleRate(double) - Method in class Filters.FilterMethod
 
setSampleRate(float, boolean) - Method in class GPS.ProcessNmeaData
 
setSampleRate(float, boolean) - Method in class GPS.UpdateClockDialog
 
setSampleRate(float, boolean) - Method in class IshmaelDetector.IshDetFnProcess
This is called when the sample rate changes.
setSampleRate(float, boolean) - Method in class IshmaelDetector.IshDetGraphics.IshDisplayPanel
 
setSampleRate(float, boolean) - Method in class IshmaelDetector.IshDetSave
 
setSampleRate(float, boolean) - Method in class IshmaelDetector.IshPeakProcess
 
setSampleRate(float, boolean) - Method in class IshmaelLocator.IshLocGraphics.IshDisplayPanel
 
setSampleRate(float, boolean) - Method in class likelihoodDetectionModule.linearAverageSpectra.LinearAverageSpectraProcess
 
setSampleRate(float, boolean) - Method in class likelihoodDetectionModule.normalizer.NormalizerProcess
 
setSampleRate(float, boolean) - Method in class likelihoodDetectionModule.spectralEti.SpectralEtiProcess
 
setSampleRate(float, boolean) - Method in class likelihoodDetectionModule.thresholdDetector.ThresholdDetectorProcess
 
setSampleRate(float, boolean) - Method in class Logging.LogDataObserver
 
setSampleRate(float, boolean) - Method in class Map.MapPanel
 
setSampleRate(float, boolean) - Method in class Map.SimpleMap
 
setSampleRate(float, boolean) - Method in class NMEA.AcquireNmeaData
 
setSampleRate(float, boolean) - Method in class noiseMonitor.NoiseTabPanel.NoiseObserver
 
setSampleRate(float, boolean) - Method in class PamguardMVC.PamDataBlock
Sets the sample rate for the block (e.g.
setSampleRate(float, boolean) - Method in interface PamguardMVC.PamObserver
New sample rate
setSampleRate(float, boolean) - Method in class PamguardMVC.PamProcess
 
setSampleRate(float, boolean) - Method in class PamguardMVC.RawDataDisplay.RawDisplayPanel
 
setSampleRate(float, boolean) - Method in class PamguardMVC.ThreadedObserver
 
setSampleRate(float, boolean) - Method in class patchPanel.PatchPanelProcess
 
setSampleRate(float, boolean) - Method in class radardisplay.RadarDisplay
 
setSampleRate(float, boolean) - Method in class rocca.RoccaSidePanel
 
setSampleRate(float, boolean) - Method in class seismicVeto.VetoPluginPanelProvider.VetoPluginPanel
 
setSampleRate(float, boolean) - Method in class soundPlayback.PlaybackProcess
 
setSampleRate(float) - Method in class SoundRecorder.RecorderControl
Called mainly so that the samplerate notification from Acquisition can be used to check the number of channels is correctly displayed.
setSampleRate(float, boolean) - Method in class SoundRecorder.RecorderProcess
 
setSampleRate(float, boolean) - Method in class Spectrogram.SpectrogramDisplay
 
setSampleRate(float, boolean) - Method in class Spectrogram.SpectrogramDisplay.SpectrogramPanel
 
setSampleRate(float) - Method in class whistleClassifier.BasicFragmentStore
 
setSampleRate(float, boolean) - Method in class whistleClassifier.ClassifierHistoryWindow
 
setSampleRate(float) - Method in class whistleClassifier.FragmentClassifierParams
 
setSampleRate(float) - Method in class whistleClassifier.HistoFragmentStore
 
setSampleRate(float) - Method in class whistleClassifier.training.TrainingDataSet
 
setSampleRate(float) - Method in class whistleClassifier.TrainingDataSet
 
setSampleRate(float, boolean) - Method in class whistleClassifier.WhistleClassifierProcess
 
setSampleRate(float, boolean) - Method in class whistleDetector.PeakDetector
 
setSampleRate(float, boolean) - Method in class whistleDetector.WhistleDetector
 
setSampleRate(float, boolean) - Method in class whistleDetector.WhistleSidePanel
 
setSampleRate(float, boolean) - Method in class WorkshopDemo.WorkshopPluginPanelProvider.WorkshopPluginPanel
 
setSamplesPerChannel(int) - Method in class nidaqdev.Nidaq.DaqConfig
 
setSamplesPerChannel(int) - Method in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
setSampsPerChanRead(int) - Method in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
setSampsPerChanToAcquire(long) - Method in class nidaqdev.Nidaq.DAQmxCfgSampClkTimingParams
 
setScale(int) - Method in class GPS.ShipDimensionsDrawing
 
setScales() - Method in class Array.HydrophoneDiagram
 
setScales() - Method in class clickDetector.ClickBTDisplay
Sets the x and y scales.
setScales(boolean) - Method in class depthReadout.DepthSidePanel.GraphAxisPanel
 
setScales(double, double, double, double, double, double) - Method in class Map.MapProjector
 
setScales(double, double, double, double, double, double) - Method in class Map.MapRectProjector
 
setScales(int, int, double, double, double[], float, double) - Method in class Spectrogram.DirectDrawProjector
 
setScales(double, double, int, int) - Method in class Spectrogram.SpectrogramProjector
 
setScore(float) - Method in class loc3d_Thode.GroupDetDataUnit
 
setScrollerCoupling(ScrollerCoupling) - Method in class pamScrollSystem.AbstractPamScroller
 
setSearchEndHz(double) - Method in class whistleDetector.WhistleParameters
 
setSearchStartHz(double) - Method in class whistleDetector.WhistleParameters
 
setSeconds(double) - Method in class likelihoodDetectionModule.GuardBandThresholdNode
 
setSecondsAfterTrigger(int) - Method in class SoundRecorder.RecorderTriggerData
 
setSecondsBeforeTrigger(int) - Method in class SoundRecorder.RecorderTriggerData
 
setSecondsBetweenDetections(double) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the seconds between detections.
setSectionLength(int) - Method in class whistleClassifier.FragmentClassifierParams
 
setSelectable(boolean) - Method in class generalDatabase.lookupTables.LookupItem
 
setSelected(boolean) - Method in class Acquisition.DaqSystem
Tell a DAQ system it's been selected or deselected.
setSelected() - Method in class clickDetector.ClickBTDisplay.AmplitudeScaleManager
 
setSelected() - Method in class clickDetector.ClickBTDisplay.BearingScaleManager
 
setSelected() - Method in class clickDetector.ClickBTDisplay.ICIScaleManager
 
setSelected() - Method in class clickDetector.ClickBTDisplay.VScaleManager
 
setSelected(boolean) - Method in class likelihoodDetectionModule.CheckRenderer.TreeLabel
Sets the selected.
setSelected(boolean) - Method in class simulatedAcquisition.SimProcess
 
setSelected(boolean) - Method in class SoundRecorder.RecorderButton
 
setSelected(boolean) - Method in class spectrogramNoiseReduction.averageSubtraction.AverageSubtractionDialogBits
 
setSelected(boolean) - Method in class spectrogramNoiseReduction.medianFilter.MedianFilterDialogBits
 
setSelected(boolean) - Method in interface spectrogramNoiseReduction.SpecNoiseDialogComponent
Called when the "Run this method" is checked or unchecked.
setSelected(boolean) - Method in class spectrogramNoiseReduction.threshold.ThresholdDialogComponent
 
setSelectedChannels(int) - Method in class likelihoodDetectionModule.LikelihoodDetectionParameters
Sets the channels that are to be used from the audio data source.
setSelectedClick(ClickDetection) - Method in class clickDetector.ClickBTDisplay
 
setSelectedCode(String) - Method in class generalDatabase.lookupTables.LookupComponent
Set the code manually, then let the comboBox part update itself
setSelectedEvent(OfflineEventDataUnit) - Method in class clickDetector.offlineFuncs.OfflineEventListPanel
 
setSelectedRow(int) - Method in class clickDetector.ClickClassifiers.UserTypesPanel
 
setSelectedSystem() - Method in class Acquisition.AcquisitionControl
 
setSendGeneralSettingsNotification(boolean) - Method in class PamView.PamDialog
Tell the Pamguard Controller to send a notification message around ALL program modules, processes and data blocks indicating that some settings have changed.
setSensitivity(double) - Method in class Array.Hydrophone
 
setSerial(long) - Method in class terrella.TerrellaStandardDataSetUnit
 
setSerialOutputParameters(NMEAParameters) - Method in class nmeaEmulator.SerialOutput
 
setSessionStartTime(long) - Static method in class PamUtils.PamCalendar
 
setSettings() - Method in class Filters.FilterDialog
 
setSettings(Object) - Method in class PamController.PamControlledUnitSettings
 
setSettings() - Method in class Spectrogram.SpectrogramDisplay
 
setSettingsStrip(SettingsStrip) - Method in class dataMap.DataMapLayout
 
setSettingsTime(long) - Method in class PamController.PamSettingsGroup
 
setShipColor(Color) - Method in class Map.Vessel
 
setShipGps(GpsData) - Method in class Map.Vessel
 
setShipOutline() - Method in class Map.Vessel
 
setShorePoint(Point) - Method in class videoRangePanel.VRControl
 
setShortName(String) - Method in class eventCounter.DataCounter
 
setShortName(String) - Method in class eventCounter.EventCounterSidePanel
 
setShortText(JTextField, Short) - Method in class clickDetector.offlineFuncs.OfflineEventDialog
 
setShouldLog(boolean) - Method in class PamguardMVC.PamDataBlock
 
setShouldPlot(ClickTrainDetection, int) - Method in class clickDetector.ClickTrainDataBlock
 
setShouldPlot(ClickTrainDetection, boolean) - Method in class clickDetector.ClickTrainDataBlock
 
setShouldPlot(boolean) - Method in class clickDetector.ClickTrainDetection
 
setShouldPlot(String, boolean) - Method in class Map.MapDetectionsManager
 
setShouldPlot(PamDataBlock, boolean) - Method in class Map.MapDetectionsManager
 
setShowAtStart(boolean) - Method in class tipOfTheDay.TipOfTheDayManager
 
setShowDetector(int, int, boolean) - Method in class Spectrogram.SpectrogramParameters
 
setShowSelection(int) - Method in class clickDetector.offlineFuncs.OfflineEventListPanel
 
setShowStats(boolean) - Method in class pamMaths.HistogramDisplay
 
setShowSubFolderOption(boolean) - Method in class PamUtils.SelectFolder
 
setShowTimes(boolean) - Method in class pamScrollSystem.PamScroller
 
setSidePanel(PamSidePanel) - Method in class PamController.PamControlledUnit
Sets the side panel for the PamControlledUnit Side panels are shown down the left hand side of the main Pamguard GUI and are always visible, irrespective of which tab is being viewed on the main tabbed display.
setSightingNum(String) - Method in class rocca.RoccaSidePanel
 
setSightNum(int) - Method in class rocca.RoccaSightingDataUnit
 
setSignalBands(ArrayList<SignalBand>) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the signal bands.
setSignalNode(SignalNode) - Method in class likelihoodDetectionModule.BackgroundNode
 
setSignalSeconds(double) - Method in class likelihoodDetectionModule.SignalNode
 
setSimObject(SimObject) - Method in class simulatedAcquisition.SimObjectDataUnit
 
setSimpleMapRef(SimpleMap) - Method in class Map.MapPanel
 
setSimSignal(SimSignal) - Method in class simulatedAcquisition.SimObjectDataUnit
 
setSimSignal() - Method in class simulatedAcquisition.SimObjectDataUnit
 
setSize(Dimension) - Method in class Map.GpsTextDisplay
 
setSize(int, int) - Method in class Map.GpsTextDisplay
 
setSleep_time(double) - Method in class terrella.TerrellaDataBlock
 
setSlope(double) - Method in class rocca.RoccaContourDataUnit
 
setSmallWindow(boolean) - Method in class clickDetector.ClickDisplayManager.ClickDisplayInfo
 
setSoundAmplitude(double[]) - Method in class simulatedAcquisition.SimSound
 
setSoundFile(boolean) - Static method in class PamUtils.PamCalendar
 
setSoundFileTimeInMillis(long) - Static method in class PamUtils.PamCalendar
 
setSource(String) - Method in class Acquisition.RawSourceDialogPanel
 
setSource(String) - Method in class PamView.SourcePanel
Set the current data source using the data source name
setSource(PamDataBlock) - Method in class PamView.SourcePanel
Set the current data source by block reference
setSource(PamDataBlock) - Method in class spectrogramNoiseReduction.SpectrogramNoiseDialogPanel
 
setSourceData(PamDataBlock) - Method in class eventCounter.DataCounter
 
setSourceList() - Method in class PamView.SourcePanel
Fill the list of available data sources, taking into account the list of excluded sources
setSourceList(boolean) - Method in class PamView.SourcePanel
 
setSourceName(String) - Method in class likelihoodDetectionModule.LikelihoodDetectionParameters
Sets the source name for the audio data source (acquisition) to be used.
setSourcePanel(SourcePanel) - Method in class spectrogramNoiseReduction.SpectrogramNoiseDialogPanel
Set a source panel so that the dialog panel can respond to source changes.
setSourceType(Class) - Method in class PamView.SourcePanel
Set the source type for this SourcePanel
setSouthAxis(PamAxis) - Method in class Layout.PamAxisPanel
 
setSouthPanel(Component) - Method in class Layout.PamFramePlots
 
setSpecialDrawing(DataMapDrawing) - Method in class dataMap.OfflineDataMap
 
setSpecialDrawing(DataMapDrawing) - Method in class PamguardMVC.OfflineDataMap
 
setSpecies(String[]) - Method in class rocca.RoccaSidePanel
Creates a new list of species and sets the counts to 0.
setSpecies(String) - Method in class whistleClassifier.training.TrainingDataSet
 
setSpecies(String) - Method in class whistleClassifier.TrainingDataSet
 
setSpecies(String) - Method in class whistleClassifier.WhistleClassificationDataUnit
 
setSpeciesClassCount(int[]) - Method in class rocca.RoccaSidePanel
Sets all the species counts.
setSpeciesDefaults(String) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
setSpeciesDiscard(int, Boolean) - Method in class clickDetector.ClickClassifiers.basic.BasicIdentifierPanel
 
setSpeciesDiscard(int, Boolean) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierPanel
 
setSpeciesDiscard(int, Boolean) - Method in class clickDetector.ClickClassifiers.UserTypesPanel
 
setSpeciesEnable(int, Boolean) - Method in class clickDetector.ClickClassifiers.basic.BasicIdentifierPanel
 
setSpeciesEnable(int, Boolean) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierPanel
 
setSpeciesEnable(int, Boolean) - Method in class clickDetector.ClickClassifiers.UserTypesPanel
 
setSpeciesIndex(int) - Method in class listening.ThingHeard
 
setSpeciesItem(SpeciesItem) - Method in class listening.ThingHeard
 
setSpeciesList(String[]) - Method in class whistleClassifier.FragmentClassifierParams
 
setSpeciesProbabilities(double[]) - Method in class whistleClassifier.WhistleClassificationDataUnit
 
setSpecNoiseSettings(SpectrogramNoiseSettings) - Method in class whistlesAndMoans.WhistleToneParameters
 
setSpeed(double) - Method in class GPS.GpsData
 
setSpeedOfSound(double) - Method in class Array.PamArray
 
setSpeedOfSoundError(double) - Method in class Array.PamArray
 
setSpinnerValue(double) - Method in class pamScrollSystem.RangeSpinner
 
setSqlType(int) - Method in class generalDatabase.PamTableItem
 
setSquareDrawnPolygon(int, int, int, int) - Method in class PamView.PamSymbol
Called to set a square drawn polygon when drawing shapes which didn't actually use the polygon draw function.
setStandardBeakedWhale() - Method in class clickDetector.ClickTypeParams
 
setStandardPorpoise() - Method in class clickDetector.ClickTypeParams
 
setStartAngle(double) - Method in class angleVetoes.AngleVeto
 
setStartSample(long) - Method in class PamDetection.AcousticDataUnit
 
setStartTime(long) - Method in class dataMap.OfflineDataMapPoint
 
setStartTime(long) - Method in class PamguardMVC.OfflineDataMapPoint
 
setStartupErrors(boolean) - Static method in class PamUtils.Splash
 
setState(TargetConfiguration.State) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the state of the configuration.
setState(TargetConfiguration.State) - Method in class likelihoodDetectionModule.TargetNode
 
setState(int) - Method in class Logging.LogToFlatFile
 
setStaticData(AISStaticData) - Method in class AIS.AISDataUnit
 
setStaticMasterReference() - Method in class Array.PamArray
 
setStatsRun(boolean) - Method in class rocca.RoccaContourDataBlock
 
setStatsWindowPos(int) - Method in class pamMaths.HistogramDisplay
 
setStatus(int) - Method in class Acquisition.AcquisitionCProcess
 
setStatus(String, String) - Method in class Acquisition.DaqStatusDataUnit
 
setStatus(int) - Method in class backendCInterfase.BackendProcess
Receive status information back across the JNI from the backend process.
setStatus(int) - Method in class binaryFileStorage.BinaryMapMakeProgress
 
setStatus(int) - Method in class clickDetector.offlineFuncs.OfflineReanalDialog
 
setStatus(String) - Method in class listening.ListeningEffortData
 
setStatus(int) - Method in class listening.ThingHeardTabPanelControl.EffortPanel
 
setStatus(int) - Method in class Localiser.GroupDetection
 
setStatus(int) - Method in class offlineProcessing.OLProcessDialog.OLMonitor
 
setStatus(int) - Method in interface offlineProcessing.TaskMonitor
Set the task status.
setStatus(int) - Method in interface soundPlayback.PlaybackProgressMonitor
Notify playback status.
setStatus(int) - Method in class Spectrogram.SpectrogramDisplay.PlayProgress
 
setStatus() - Method in class videoRangePanel.VRSidePanel
 
setStatus() - Method in class videoRangePanel.VRTabPanelControl
 
setStatus(int, int) - Method in class whistleClassifier.training.ClassifierTrainingDialog
 
setStatus(int, int) - Method in interface whistleClassifier.training.TrainingObserver
 
setStatus(int) - Method in class whistleDetector.EventDataUnit
 
setStatusBarLevel(double) - Method in class Acquisition.AcquisitionControl
Sets a level meter on the status bar
setStdConfusion(Matrix) - Method in class whistleClassifier.FragmentClassifierParams
 
setStep(int) - Method in class rocca.RoccaContourDataUnit
 
setStepSizeMillis(int) - Method in class pamScrollSystem.AbstractPamScroller
 
setStopBits(int) - Method in class portcomms.SerialPortParameters
 
setStopBits(int) - Method in class serialComms.SerialPortPanel
 
setStorageSource(String) - Method in class whistleClassifier.training.TrainingDataSet
 
setStorageSource(String) - Method in class whistleClassifier.TrainingDataSet
 
setStreamerId(int) - Method in class Array.Hydrophone
 
setStreamName(String) - Method in class binaryFileStorage.BinaryHeader
 
setStreamName(String) - Method in class binaryFileStorage.BinaryMapMakeProgress
 
setStreamStatus(int) - Method in class Acquisition.DaqSystem
 
setStreamStatus(int) - Method in class Acquisition.FileInputSystem
 
setStringData(String) - Method in class PamUtils.Ascii6Bit
 
setSummaryLists() - Method in class offlineProcessing.OfflineTaskGroup
Setup summary lists of required and affected datablocks based on which tasks are actually going to run .
setSuspectEventTimes(boolean) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setSweep(int) - Method in class rocca.RoccaContourDataUnit
 
setSymbol(PamSymbol) - Method in class Array.Hydrophone
 
setSymbol(PamSymbol) - Method in class clickDetector.ClickClassifiers.basic.ClickTypeDialog.SymbolPanel
 
setSymbol(PamSymbol) - Method in class listening.SpeciesItem
 
setSymbol(PamSymbol, int, int, int) - Method in class noiseMonitor.NoiseTabPanel
 
setSymbol(int) - Method in class PamView.PamSymbol
 
setSymbol() - Method in class PamView.PamSymbolSelector
 
setSymbol(PamSymbol) - Method in class PamView.PamSymbolViewer
 
setSymbolSize(double) - Method in class loc3d_Thode.TowedArray3DOverlayGraphics
 
setSymbolType(String) - Method in class generalDatabase.lookupTables.LookupItem
 
setSystemTime(long) - Static method in class PamUtils.SystemTiming
 
setSystemTime(Calendar) - Static method in class PamUtils.SystemTiming
 
setTableData(PamDataUnit) - Method in class Acquisition.AcquisitionLogging
 
setTableData(PamDataUnit) - Method in class AIS.AISLogger
 
setTableData(PamDataUnit) - Method in class angleMeasurement.AngleLogging
 
setTableData(PamDataUnit) - Method in class beakedWhaleProtocol.BeakedExperimentLogging
 
setTableData(PamDataUnit) - Method in class beakedWhaleProtocol.BeakedLogging
 
setTableData(PamDataUnit) - Method in class beakedWhaleProtocol.ShoreStationLogging
 
setTableData(PamDataUnit) - Method in class clickDetector.ClickLogger
 
setTableData(PamDataUnit) - Method in class clickDetector.ClickTrainLogger
 
setTableData(PamDataUnit) - Method in class clickDetector.offlineFuncs.OfflineClickLogging
 
setTableData(PamDataUnit) - Method in class clickDetector.offlineFuncs.OfflineEventLogging
 
setTableData(PamDataUnit) - Method in class depthReadout.DepthSQLLogging
 
setTableData(PamDataUnit) - Method in class generalDatabase.LogModules
 
setTableData(PamDataUnit) - Method in class generalDatabase.LogSettings
 
setTableData(PamCursor, LookupItem) - Method in class generalDatabase.lookupTables.LookUpTables
Set data in the result set.
setTableData(PamDataUnit) - Method in class generalDatabase.PamDetectionLogging
 
setTableData(PamDataUnit) - Method in class generalDatabase.SQLLogging
Callback function when new data are created that allows the user to set the data for each column.
setTableData(PamDataUnit) - Method in class GPS.GpsLogger
 
setTableData(PamDataUnit) - Method in class IshmaelDetector.IshLogger
 
setTableData(PamDataUnit) - Method in class likelihoodDetectionModule.thresholdDetector.DetectorSQLLogging
 
setTableData(PamDataUnit) - Method in class listening.ListeningEffortLogging
 
setTableData(PamDataUnit) - Method in class listening.ThingHeardLogging
 
setTableData(PamDataUnit) - Method in class loc3d_Thode.TowedArray3DSQLLogging
 
setTableData(PamDataUnit) - Method in class Map.MapCommentSQLLogging
 
setTableData(PamDataUnit) - Method in class noiseMonitor.NoiseLogging
 
setTableData(PamDataUnit) - Method in class seismicVeto.VetoLogging
 
setTableData(PamDataUnit) - Method in class SoundRecorder.RecorderLogger
 
setTableData(PamDataUnit) - Method in class terrella.TerrellaLogger
 
setTableData(PamDataUnit) - Method in class UserInput.UserInputLogger
 
setTableData(PamDataUnit) - Method in class videoRangePanel.VRLogging
 
setTableData(PamDataUnit) - Method in class whistleClassifier.WhistleClassifierLogging
 
setTableData(PamDataUnit) - Method in class whistleDetector.WhistleEventLogger
 
setTableData(PamDataUnit) - Method in class whistleDetector.WhistleLogger
 
setTableData(PamDataUnit) - Method in class WorkshopDemo.WorkshopSQLLogging
 
setTableDefinition(PamTableDefinition) - Method in class generalDatabase.SQLLogging
 
setTableName(String) - Method in class generalDatabase.EmptyTableDefinition
 
setTabPanel(PamTabPanel) - Method in class PamController.PamControlledUnit
Sets the tab panel for the PamControlledUnit.
setTargetConfigurations(ArrayList<TargetConfiguration>) - Method in class likelihoodDetectionModule.TreeTableModel
Sets the TargetConfigurations that are being managed by the model.
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DaqConfig
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxCfgSampClkTimingParams
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxClearTaskParams
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxCreateAIVoltageChanParams
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxCreateTaskParams
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxStartTaskParams
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxStopTaskParams
 
setTaskMonitor(TaskMonitor) - Method in class offlineProcessing.OfflineTaskGroup
 
setTdd(double, int) - Method in class loc3d_Thode.GroupDetDataUnit
 
setTdd(double[]) - Method in class loc3d_Thode.GroupDetDataUnit
 
setTds_max(long) - Method in class loc3d_Thode.StationQueue
 
setTemperature(double) - Method in class terrella.TerrellaStandardDataSetUnit
 
setTerminalConfig(int) - Method in class nidaqdev.Nidaq.DAQmxCreateAIVoltageChanParams
 
setTerminalConfig(int) - Method in class nidaqdev.Nidaq
 
setTerrellaX(double) - Method in class terrella.TerrellaDataBlock
 
setTerrellaY(double) - Method in class terrella.TerrellaDataBlock
 
setText(String) - Method in class generalDatabase.lookupTables.LookupItem
 
setText(String) - Method in class PamView.DBTextArea
 
setText(String) - Method in class PamView.TextKeyItem
 
setText(String) - Method in class whistleClassifier.training.ClassifierTrainingDialog.ProgressPanel
 
setText(String) - Method in interface whistleClassifier.training.ProgressInformation
 
setTextLength(int) - Method in class PamUtils.SelectFolder
 
setThreadingJitterMillis(int) - Method in class PamModel.PamModelSettings
 
setThreshold(double) - Method in class likelihoodDetectionModule.SnrThresholdNode
 
setTickPosition(int) - Method in class Layout.PamAxis
 
setTilt(double) - Method in class Array.Hydrophone
 
setTilt(double, int) - Method in class PamDetection.PamLocalisation
Deprecated.  
setTilt(double) - Method in class videoRangePanel.ImageAnglePanel
 
setTilts(double[]) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setTilts(double, int) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setTiltType(int) - Method in class Array.PamArray
 
setTime(int) - Method in class GPS.GpsData
 
setTimeInMillis(long) - Method in class GPS.GpsData
 
setTimeInsets() - Method in class noiseMonitor.NoiseTabPanel.PlotAxesPanel
 
setTimeLimits() - Method in class nmeaEmulator.NMEAFrontEnd
 
setTimeMilliseconds(long) - Method in class PamguardMVC.PamDataUnit
 
setTimeout(double) - Method in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
setTimeRange(double) - Method in class clickDetector.BTDisplayParameters
 
setTimeRanges(double[]) - Method in class pamScrollSystem.RangeSpinner
 
setTimeResolution(double) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the time resolution.
setTimeSeconds(double[]) - Method in class whistleClassifier.TrainingContour
 
setTimesInSeconds(double[]) - Method in class whistleClassifier.training.TrainingContour
 
setTimeZero() - Method in class whistleClassifier.WhistleFragment
Reference all the times in the fragment to zero
setting - Variable in class dataMap.ScalePanel
 
settings(Frame) - Method in class angleMeasurement.AngleMeasurement
 
settings(Frame) - Method in class angleMeasurement.FluxgateWorldAngles
 
settings(Frame) - Method in class beakedWhaleProtocol.BeakedControl
 
settings - Variable in class likelihoodDetectionModule.TargetConfigurationImporter
The settings.
settings - Variable in class PamController.PamControlledUnitSettings
 
settingsButton - Variable in class beakedWhaleProtocol.BeakedSidePanel
 
settingsButton - Variable in class offlineProcessing.OLProcessDialog
 
settingsButton(JFrame) - Method in class videoRangePanel.VRControl
 
settingsButton - Variable in class videoRangePanel.VRSidePanel.VRPanel
 
settingsDialog(Frame) - Method in class spectrogramNoiseReduction.SpectrogramNoiseControl
 
settingsDialog(Frame) - Method in class whistleClassifier.WhistleClassifierControl
 
settingsDialog(Frame) - Method in class whistlesAndMoans.WhistleMoanControl
 
settingsDialog(Frame) - Method in class whitesWhistleDetector.WhitesWhistleControl
 
settingsFileData - Variable in class PamController.PamSettingManager
 
SettingsFileData - Class in PamController
 
SettingsFileData() - Constructor for class PamController.SettingsFileData
 
settingsFileData - Variable in class PamController.SettingsFileDialog
 
SettingsFileDialog - Class in PamController
 
SettingsFileDialog(Frame, String, boolean) - Constructor for class PamController.SettingsFileDialog
 
SettingsFileDialog.BrowseButton - Class in PamController
 
SettingsFileDialog.BrowseButton() - Constructor for class PamController.SettingsFileDialog.BrowseButton
 
SettingsFileDialog.NewButton - Class in PamController
 
SettingsFileDialog.NewButton() - Constructor for class PamController.SettingsFileDialog.NewButton
 
SETTINGSFILENAME - Static variable in class binaryFileStorage.BinarySettingsStorage
 
settingsFileType - Static variable in class binaryFileStorage.BinaryStore
 
settingsGroup - Variable in class dataMap.SettingsStrip.DrawnQuickFind
 
settingsGroup - Variable in class dataMap.SettingsStrip.LoadMenuItem
 
settingsGroups - Variable in class generalDatabase.DBSettingsStore
 
settingsListFile - Variable in class PamController.PamSettingManager
Name of the file that contains a list of recent psf files.
SETTINGSSTORE - Static variable in class binaryFileStorage.BinarySettingsStorage
 
settingsStrip - Variable in class dataMap.DataMapLayout
 
settingsStrip - Variable in class dataMap.ScrollingDataPanel
 
SettingsStrip - Class in dataMap
Display a simple strip along the top of the Scrolling data panel which shows a little arrow or something for each set of PAMGAURD settings
SettingsStrip(ScrollingDataPanel) - Constructor for class dataMap.SettingsStrip
 
SettingsStrip.DrawnQuickFind - Class in dataMap
Class to enable quick retrieval of settings information as the mouse hovers over the display.
SettingsStrip.DrawnQuickFind(Polygon, PamSettingsGroup) - Constructor for class dataMap.SettingsStrip.DrawnQuickFind
 
SettingsStrip.LoadMenuItem - Class in dataMap
 
SettingsStrip.LoadMenuItem(PamSettingsGroup) - Constructor for class dataMap.SettingsStrip.LoadMenuItem
 
SettingsStrip.SettingsMouse - Class in dataMap
 
SettingsStrip.SettingsMouse() - Constructor for class dataMap.SettingsStrip.SettingsMouse
 
settingsTime - Variable in class PamController.PamSettingsGroup
 
settingsUsed - Variable in class PamController.PamSettingManager
 
setTip(String) - Method in class tipOfTheDay.PamTip
 
setTip(PamTip) - Method in class tipOfTheDay.PamTipViewer
 
setTitle() - Method in class dataMap.DataStreamPanel.DataName
 
setTitle(String) - Method in class pamMaths.HistogramDisplay.HistoBorderPanel
 
setTitle(String) - Method in class PamView.PamGui
 
setTitle(String) - Method in class PamView.PamObjectViewer
 
setTitle(String) - Method in interface PamView.PamViewInterface
 
setTitle(String) - Method in class performanceTests.PerformanceWindow
 
setToolBar(JToolBar) - Method in class clickDetector.offlineFuncs.OfflineToolbar
 
setTopic(String) - Method in class generalDatabase.lookupTables.LookupEditDialog
 
setTopic(String) - Method in class generalDatabase.lookupTables.LookupItem
 
setTopic(String) - Method in class tipOfTheDay.PamTip
 
setTotalStreams(int) - Method in class binaryFileStorage.BinaryMapMakeProgress
 
setTracked(boolean) - Method in class clickDetector.ClickDetection
 
setTracked(boolean) - Method in class clickDetector.OldClickClass
 
setTrainId(int) - Method in class clickDetector.ClickTrainDetection
 
setTrainingDataCollection(TrainingDataCollection) - Method in class whistleClassifier.training.TrainingSelector
Sets the training data collection
setTrainStatus(int) - Method in class clickDetector.ClickTrainDetection
 
setTransmissionGains(double[][]) - Method in class simulatedAcquisition.SimSound
 
setTriggerHistogram(TriggerHistogram[]) - Method in class clickDetector.TriggerLevelDataUnit
 
setTrueHeading(Double) - Method in class GPS.GpsData
 
setTrueValues(double[]) - Method in class angleMeasurement.AngleCalibration
 
setType(String) - Method in class Array.Hydrophone
 
setType(int) - Method in class noiseMonitor.NoiseMeasurementBand
 
setType(String) - Method in class PamguardMVC.Annotation
 
setTypeSpecificPanel() - Method in class clickDetector.ClickClassifiers.ClickClassifyDialog
 
setUI(HelpContentViewerUI) - Method in class PamView.PamHelpContentViewer
 
setUniqueEvent(ClickDetection, OfflineEventDataUnit) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
Ensure that there is only one event superdetection per click.
setUniqueSuperDetection(U) - Method in class PamDetection.PamDetection
Sets a unique super detection.
setUnitIncrement(long) - Method in class pamScrollSystem.AbstractPamScroller
 
setUnitIncrement(long) - Method in class pamScrollSystem.PamScroller
 
setUnits(int) - Method in class nidaqdev.Nidaq.DAQmxCreateAIVoltageChanParams
 
setUnitType(String) - Method in class PamController.UsedModuleInfo
 
setupArrays(boolean) - Method in class PamView.BasicKeyItem
 
setupCalibration() - Method in class angleMeasurement.AngleMeasurement
Sets up the angle calibration.
setUpClassifier() - Method in class rocca.RoccaClassifier
Loads the Classifier model from the file specified in RoccaParameters
setupClassifier() - Method in class whistleClassifier.WhistleClassifierControl
SEts up a classifier with classifier specific settings Future versions, which will support > 1 type of classifier will have to look at the class in the parameters and create the correct type of classifier.
setupConnections() - Method in class IshmaelDetector.IshDetFnProcess
 
setupConnections() - Method in class IshmaelDetector.IshPeakProcess
 
setupConnections() - Method in class IshmaelLocator.IshLocProcess
 
setupControlledUnit() - Method in class Acquisition.AcquisitionControl
 
setupControlledUnit() - Method in class clickDetector.ClickControl
 
setupControlledUnit() - Method in class decimator.DecimatorControl
 
setupControlledUnit() - Method in class fftManager.PamFFTControl
 
setupControlledUnit() - Method in class IshmaelLocator.IshLocControl
 
setupControlledUnit() - Method in class KernelSmoothing.KernelSmoothingControl
 
setupControlledUnit() - Method in class NMEA.NMEAControl
 
setupControlledUnit() - Method in class PamController.PamControlledUnit
called for all PamControlledUnits after all units have been created.
setupCount - Static variable in class seismicVeto.VetoProcess.ChannelDetector
 
setupCount - Static variable in class WorkshopDemo.WorkshopProcess.ChannelDetector
 
setupDataBlock() - Method in class Acquisition.AcquisitionProcess
called when acquisition parameters change.
setUpdated(boolean) - Method in class clickDetector.offlineFuncs.OfflineClickDetection
 
setUpdatePolicy(int) - Method in class generalDatabase.SQLLogging
 
setUpdateReference(PamTableItem) - Method in class generalDatabase.PamTableDefinition
 
setupFFT() - Method in class fftManager.PamFFTProcess
 
setupFFT() - Method in class likelihoodDetectionModule.LikelihoodFFTProcess
 
setupFilter(double, double, double) - Method in class clickDetector.TriggerFilter
Initialises the filter
setupFilters() - Method in class decimator.DecimatorProcess
 
setupFixedPointReferenceBlock() - Method in class Array.PamArray
 
setupGpsMonitor() - Method in class Array.StraightHydrophoneLocator
 
setupGroups(GroupedSourceParameters) - Method in class Localiser.DetectionGrouper
 
setupList() - Method in class PamguardMVC.DataUnitFinder
 
setupList() - Method in class PamguardMVC.DeletedDataUnitFinder
 
setupLogging() - Method in class whistleClassifier.WhistleClassifierProcess
Called after settings read in so that correct table can be created.
setupObjects() - Method in class simulatedAcquisition.SimProcess
 
setupPamguard() - Method in class PamController.PamController
 
setupPanel() - Method in class fftManager.FFTPluginPanelProvider.FFTPluginPanel
 
setupProcess() - Method in class clickDetector.ClickDetector.ChannelGroupDetector
 
setupProcess() - Method in class clickDetector.ClickDetector
 
setupProcess() - Method in class decimator.DecimatorProcess
 
setupProcess() - Method in class Filters.FilterProcess
 
setupProcess() - Method in class KernelSmoothing.KernelSmoothingProcess
 
setupProcess() - Method in class PamguardMVC.PamProcess
called for every process once the systemmodel has been created.
setupProcess() - Method in class spectrogramNoiseReduction.SpectrogramNoiseProcess
 
setupProcess() - Method in class whistleClassifier.WhistleClassifierControl
 
setupProcess() - Method in class whistlesAndMoans.WhistleToneConnectProcess
 
setupProcess() - Method in class whitesWhistleDetector.WhitesConnectProcess
 
setupProcesses() - Method in class PamController.PamController
 
setupProgressBar(String, int, int) - Method in class clickDetector.offlineFuncs.OfflineToolbar
 
setupRTOperation() - Method in class Filters.IirfFilter
Setup buffers and filter pairs for real time operation
setupScrollBar(long) - Method in class clickDetector.ClickBTDisplay.HScrollManager
Set up the scroll bar
setupScrollBar(long) - Method in class clickDetector.ClickBTDisplay.OfflineScrollManager
 
setupScrollBar(long) - Method in class clickDetector.ClickBTDisplay.RealTimeScrollManager
 
setupScrollBar(double, double) - Method in class clickDetector.ClickBTDisplay.VScaleManager
 
setupScrollBar() - Method in class dataMap.ScrollingDataPanel
 
setupSim() - Method in class simulatedAcquisition.SimProcess
 
setupSouthAxis(float) - Method in class fftManager.FFTPluginPanelProvider.FFTPluginPanel
 
setupStatusBar() - Method in class Acquisition.AcquisitionControl
 
setupStyles() - Method in class tipOfTheDay.PamTipViewer
 
setupTerrallaMonitor() - Method in class Array.TerrellaHydrophoneLocator
 
setupTypeCount() - Method in class clickDetector.ClickBinaryModuleFooter
 
setupViewScroller() - Method in class Spectrogram.SpectrogramDisplay
set up the page size on the view scroller and also sets up the range spinner
setUseAnalysisTime(boolean) - Method in class PamController.PamViewParameters
 
setUseDSP(boolean) - Static method in class PamController.pamBuoyGlobals
 
setUserFrameParameters(UserFrameParameters) - Method in class userDisplay.UserFramePlots
 
setUserString(String) - Method in class UserInput.UserInputDataUnit
 
setValue(Object) - Method in class clickDetector.ClickClassifiers.basicSweep.CodeSpinnerModel
 
setValue(Object) - Method in class fftManager.FFTLengthModel
 
setValue(Object) - Method in class generalDatabase.PamTableItem
Sets the value of data to be written to the database column.
setValue(double) - Method in class likelihoodDetectionModule.SecondsBetweenDetectionsNode
 
setValue(double) - Method in class pamScrollSystem.RangeSpinner.RangeSpinnerModel
Convenience function that calls setValue(Object o) with the same value wrapped as a DOuble
setValue(Object) - Method in class pamScrollSystem.RangeSpinner.RangeSpinnerModel
 
setValueAt(Object, int, int) - Method in class clickDetector.ClickClassifiers.UserTypesPanel.ClickTypesTableData
 
setValueAt(Object, int, int) - Method in class generalDatabase.lookupTables.LookupEditDialog.LUTDataModel
 
setValueAt(Object, int, int) - Method in class likelihoodDetectionModule.TreeTable
 
setValueAt(Object, Object, int) - Method in class likelihoodDetectionModule.TreeTableModel
Implementation of TreeModel.setValueAt().
setValueAt(Object, int, int) - Method in class likelihoodDetectionModule.TreeTableModelAdapter
 
setValueMillis(long) - Method in class pamScrollSystem.AbstractPamScroller
 
setValueText(double) - Method in class pamScrollSystem.RangeSpinner
 
setVector(double[]) - Method in class pamMaths.PamVector
 
setVersionNumber(int) - Method in class binaryFileStorage.BinaryObjectData
 
setVesselDimension(double, double, double, double) - Method in class Map.Vessel
 
setVetoOn(boolean) - Method in class seismicVeto.VetoBackgroundDataUnit
 
setVetoTimes(int, long) - Method in class seismicVeto.VetoProcess
 
setViewEndTime(long) - Method in class PamController.PamViewParameters
 
setViewPosition(long) - Static method in class PamUtils.PamCalendar
 
setViewStartTime(long) - Method in class PamController.PamViewParameters
 
setViewTimes(long, long) - Static method in class PamUtils.PamCalendar
 
setVisible(boolean) - Method in class AIS.AISStringsTable.AISFrame
 
setVisible(boolean) - Method in class angleVetoes.AngleVetoDisplay
 
setVisible(boolean) - Method in class beakedWhaleProtocol.BeakedLocationDialog
 
setVisible(boolean) - Method in class binaryFileStorage.BinaryMapMakingDialog
 
setVisible(boolean) - Method in class clickDetector.offlineFuncs.OfflineReanalDialog
 
setVisible(boolean) - Method in class generalDatabase.DBMapMakingDialog
 
setVisible(boolean) - Method in class GPS.UpdateClockDialog
 
setVisible(boolean) - Method in class Map.MapCommentDialog
 
setVisible(boolean) - Method in class NMEA.NMEAStringsTable.NMEAFrame
 
setVisible(boolean) - Method in class offlineProcessing.OLProcessDialog
 
setVisible(boolean) - Method in class pamScrollSystem.AbstractPamScroller
Set the visibility of the scroll bar component.
setVisible(boolean) - Method in class pamScrollSystem.LoadingDataDialog
 
setVisible(boolean) - Method in class PamView.ObserverListPopup
 
setVisible(boolean) - Method in class PamView.PamDialog
 
setVisible(boolean) - Method in class PamView.PamObjectViewer.ObjectFrame
 
setVisible(boolean) - Method in class performanceTests.PerformanceWindow
 
setVisibleAmount(long) - Method in class pamScrollSystem.AbstractPamScroller
 
setVisibleAmount(long) - Method in class pamScrollSystem.PamScroller
 
setVisibleControls() - Method in class PamUtils.SelectFolder
 
setVoltsPeak2Peak(double) - Method in class Acquisition.AcquisitionParameters
 
setVolume(int) - Method in class listening.ThingHeard
 
setVP2P(double) - Method in class nidaqdev.NIDAQProcess
 
setVPeak2Peak(double) - Method in class Acquisition.AcquisitionDialog
Called by the specific DaqSystem to set the peak to peak voltage range.
setVrMeasurement(VRMeasurement) - Method in class videoRangePanel.VRDataUnit
 
setVrStatus(int) - Method in class videoRangePanel.VRControl
 
setVrSubStatus(int) - Method in class videoRangePanel.VRControl
 
setVScale(int) - Method in class clickDetector.ClickBTDisplay
 
setWantedString() - Method in class GPS.ProcessNmeaData
 
setWarnDefaultSetting(boolean) - Method in class PamView.PamDialog
 
setWarningTitle(String) - Method in class PamView.PamDialog
 
setWaveData(double[][]) - Method in class clickDetector.ClickDetection
 
setWaveData(double[][]) - Method in class clickDetector.OldClickClass
 
setWavRecDir(String) - Static method in class PamController.pamBuoyGlobals
 
setWavString(String) - Static method in class PamController.pamBuoyGlobals
 
setWestAxis(PamAxis) - Method in class Layout.PamAxisPanel
 
setWestPanel(Component) - Method in class Layout.PamFramePlots
 
setWestTitle(String) - Method in class generalDatabase.lookupTables.LookupComponent
 
setWhistleClassificationParameters(WhistleClassificationParameters) - Method in class whistleClassifier.WhistleClassifierControl
 
setWhistleFragmenter(WhistleFragmenter) - Method in class whistleClassifier.training.TrainingSelector
Set the whistle fragmenter to use.
setWhistleFragmenter(WhistleFragmenter) - Method in class whistleClassifier.WhistleClassifierControl
 
setWhistlePeaks(ArrayList<WhistlePeak>) - Method in class whistleDetector.PeakDataUnit
 
setWhistleShape(WhistleShape) - Method in class whistleDetector.ShapeDataUnit
 
setWidth(int) - Method in class PamView.PamSymbol
 
setWindowGain(double) - Method in class fftManager.FFTDataBlock
 
setWindowRMS(double) - Method in class rocca.RoccaContourDataUnit
 
setWriteCount(int, int) - Method in class generalDatabase.DBControl
 
setWriteToFile(PrintWriter) - Method in class Logging.LogToFlatFile
 
setX(double) - Method in class Array.Hydrophone
 
setX(double) - Method in class Array.Streamer
 
setX1(int) - Method in class Layout.PamAxis
 
setX2(int) - Method in class Layout.PamAxis
 
setXAxisNumberFormat(String) - Method in class pamMaths.HistogramDisplay
 
setXLabel(String) - Method in class pamMaths.HistogramDisplay
 
setXTE(double) - Method in class beakedWhaleProtocol.BeakedControl
 
setY(double) - Method in class Array.Hydrophone
 
setY(double) - Method in class Array.Streamer
 
setY1(int) - Method in class Layout.PamAxis
 
setY2(int) - Method in class Layout.PamAxis
 
setYLabel(String) - Method in class pamMaths.HistogramDisplay
 
setYScale() - Method in class clickDetector.ClickWaveform
 
setZ(double) - Method in class Array.Hydrophone
 
setZ(double) - Method in class Array.Streamer
 
setZero() - Method in class angleMeasurement.AngleMeasurement
 
setZero() - Method in class angleMeasurement.FluxgateWorldAngles
 
setZero - Variable in class angleMeasurement.FluxgateWorldDialog
 
setZoom(ZoomShape) - Method in class clickDetector.ClickBTDisplay.AmplitudeScaleManager
 
setZoom(ZoomShape) - Method in class clickDetector.ClickBTDisplay.BearingScaleManager
 
setZoom(ZoomShape) - Method in class clickDetector.ClickBTDisplay.ICIScaleManager
 
setZoom(ZoomShape) - Method in class clickDetector.ClickBTDisplay.VScaleManager
 
SgramCorrControl - Class in IshmaelDetector
 
SgramCorrControl(String) - Constructor for class IshmaelDetector.SgramCorrControl
 
SgramCorrControl.menuSmoothingDetection - Class in IshmaelDetector
 
SgramCorrControl.menuSmoothingDetection() - Constructor for class IshmaelDetector.SgramCorrControl.menuSmoothingDetection
 
SgramCorrParams - Class in IshmaelDetector
 
SgramCorrParams() - Constructor for class IshmaelDetector.SgramCorrParams
 
SgramCorrParamsDialog - Class in IshmaelDetector
 
SgramCorrParamsDialog(Frame, Class) - Constructor for class IshmaelDetector.SgramCorrParamsDialog
 
SgramCorrProcess - Class in IshmaelDetector
This implements the spectrogram correlation detector.
SgramCorrProcess(SgramCorrControl, PamDataBlock) - Constructor for class IshmaelDetector.SgramCorrProcess
 
SgramCorrProcess.PerChannelInfo - Class in IshmaelDetector
Information specific to each channel.
SgramCorrProcess.PerChannelInfo() - Constructor for class IshmaelDetector.SgramCorrProcess.PerChannelInfo
 
shallowColour - Variable in class Map.MapPanel
 
shapeConnectors - Variable in class whistlesAndMoans.WhistleToneConnectProcess
 
shapeConnectors - Variable in class whitesWhistleDetector.WhitesConnectProcess
 
ShapeDataUnit - Class in whistleDetector
Example class to go with WslPeak to show how WslPeaks, WslShapes and WslEvents all go together.
ShapeDataUnit(long, int, long, int, WhistleShape) - Constructor for class whistleDetector.ShapeDataUnit
 
shapeDataUnit - Variable in class whistleDetector.WhistleLocalisation
 
shapeFit - Variable in class whistleClassifier.WhistleFragment
 
ship - Variable in class Map.MapPanel
 
ShipDimensionsDrawing - Class in GPS
Class to draw a simple ship, to show the layout of the standard AIS dimensions.
ShipDimensionsDrawing() - Constructor for class GPS.ShipDimensionsDrawing
 
shipDimensionsFields - Variable in class AirgunDisplay.AirgunParametersDialog
 
shipDimensionsFields - Variable in class GPS.GPSParametersDialog
 
ShipDimensionsFields - Class in GPS
 
ShipDimensionsFields(String) - Constructor for class GPS.ShipDimensionsFields
 
ShipDimensionsPanel - Class in GPS
 
ShipDimensionsPanel(Component, Component) - Constructor for class GPS.ShipDimensionsPanel
 
shipDims - Variable in class GPS.ShipDimensionsFields
 
shipDrawing - Variable in class AirgunDisplay.AirgunParametersDialog
 
shipDrawing - Variable in class GPS.GPSParametersDialog
 
shipGps - Variable in class Map.Vessel
 
shipIconLength - Variable in class Map.Vessel
 
shipIDPanel - Variable in class AirgunDisplay.AirgunParametersDialog
 
shipLocation - Variable in class Map.Vessel
 
shipName - Variable in class AIS.AISLogger
 
shipName - Variable in class AIS.AISStaticData
 
shipOutline - Variable in class Map.Vessel
 
shipPolygon - Variable in class Map.Vessel
 
shipPolygonLatLog - Variable in class Map.Vessel
 
shipPosition - Variable in class Map.Vessel
 
shipRotTest - Variable in class Map.SimpleMap
 
shipType - Variable in class AIS.AISLogger
 
shipType - Variable in class AIS.AISStaticData
 
shipTypeAndCargo() - Method in class AIS.AISStaticData
 
shipTypeAndCargo(int) - Method in class AIS.AISStaticData
 
shoreFile - Variable in class videoRangePanel.VRParameters
file name for shore data (Gebco format)
shoreInfo - Variable in class videoRangePanel.ImageAnglePanel
 
ShoreManager - Class in videoRangePanel
Separate class to manage shore functions for the video range, all this could go in the controller, but might as well keep it separate.
ShoreManager() - Constructor for class videoRangePanel.ShoreManager
 
ShoreManager(MapFileManager) - Constructor for class videoRangePanel.ShoreManager
 
shoreManager - Variable in class videoRangePanel.VRControl
 
shorePanel - Variable in class videoRangePanel.VRParametersDialog
 
shorePoint - Variable in class videoRangePanel.VRControl
 
shoreRanges - Variable in class videoRangePanel.VRControl
 
shoreStation - Variable in class beakedWhaleProtocol.BeakedParameters
 
shoreStationDataBlock - Variable in class beakedWhaleProtocol.BeakedProcess
 
ShoreStationDataBlock - Class in beakedWhaleProtocol
 
ShoreStationDataBlock(String, PamProcess) - Constructor for class beakedWhaleProtocol.ShoreStationDataBlock
 
shoreStationDataUnit - Variable in class beakedWhaleProtocol.BeakedLocationDialog
 
ShoreStationDataUnit - Class in beakedWhaleProtocol
 
ShoreStationDataUnit(long, LatLong, double) - Constructor for class beakedWhaleProtocol.ShoreStationDataUnit
 
ShoreStationGraphics - Class in beakedWhaleProtocol
 
ShoreStationGraphics(BeakedControl) - Constructor for class beakedWhaleProtocol.ShoreStationGraphics
 
shoreStationHeight - Variable in class beakedWhaleProtocol.BeakedParameters
 
ShoreStationLogging - Class in beakedWhaleProtocol
 
ShoreStationLogging(PamDataBlock) - Constructor for class beakedWhaleProtocol.ShoreStationLogging
 
shoreSymbol - Variable in class beakedWhaleProtocol.ShoreStationGraphics
 
shortestFFTLength - Variable in class clickDetector.ClickDetection
 
shortFilter - Variable in class clickDetector.ClickParameters
 
shortFilter - Variable in class clickDetector.dialogs.ClickParamsDialog
 
shortName - Variable in class eventCounter.DataCounter
 
shortName - Variable in class eventCounter.EventCounterSidePanel
 
shortPenalty(int) - Method in class whistlesAndMoans.RejoiningFragmenter
calculate a penalty to penalise very short fragments by when deciding which are the best match during a merge of a split.
shortScaleNames - Static variable in class videoRangePanel.VRParameters
 
shortTriggerFilter - Variable in class clickDetector.ClickDetector.ChannelGroupDetector
 
shouldAutoRecord() - Method in class SoundRecorder.RecorderControl
 
shouldDelete() - Method in class PamguardMVC.PamDataBlock
 
shouldEnableRecording() - Method in class SoundRecorder.RecorderControl
 
shouldLog(PamDataBlock, PamDataUnit) - Method in class generalDatabase.DBProcess
 
shouldLog - Variable in class PamguardMVC.PamDataBlock
 
shouldNotify() - Method in class Map.MapCommentDataBlock
 
shouldNotify() - Method in class PamguardMVC.PamDataBlock
 
shouldPlot(ClickDetection) - Method in class clickDetector.ClickBTDisplay
Return true if the click should be plotted on the current display using the following tests:
shouldPlot(PamDataUnit, GeneralProjector) - Method in class clickDetector.ClickGroupGraphics
Deprecated.  
shouldPlot - Variable in class clickDetector.ClickTrainDetection
 
shouldPlot(ClickTrainDetection) - Method in class clickDetector.ClickTrainGraphics
 
shouldPlot - Variable in class Map.MapDetectionData
 
shouldPlot(PamDataBlock) - Method in class Map.MapPanel
 
shouldPlot(PamDataUnit, MapDetectionData, long) - Method in class Map.MapPanel
 
shouldPlotSpecies(int) - Method in class clickDetector.ClickBTDisplay
 
shouldPoll() - Method in interface depthReadout.DepthSystem
DepthProcess should ask this system for data every so often if this return false, then the data are comign from somewhere beyond the immediate contron of Pamgaurd and we just wait for it to arrive.
shouldPoll() - Method in class depthReadout.MccDepthSystem
 
shouldPrintSoundCardError(double) - Method in class Acquisition.AcquisitionProcess
 
shouldSelectCell(EventObject) - Method in class likelihoodDetectionModule.AbstractCellEditor
 
show(AISControl) - Static method in class AIS.AISStringsTable
 
show(NMEAControl) - Static method in class NMEA.NMEAStringsTable
 
show(JFrame, Point, PamDataBlock) - Static method in class PamView.ObserverListPopup
 
Show() - Static method in class PamView.PamObjectViewer
 
show(Window, PamSymbol, int, int) - Static method in class PamView.PamSymbolDialog
Show the dialog as a specific x,y, location
show(Window, PamSymbol) - Static method in class PamView.PamSymbolDialog
Show the dialog at a default (or most recent) location
SHOW_ALL - Static variable in class clickDetector.offlineFuncs.OfflineEventListPanel
show all events
SHOW_MAP - Static variable in class clickDetector.NewClickOverlayGraphics
 
SHOW_RADAR - Static variable in class clickDetector.NewClickOverlayGraphics
 
SHOW_SELECTION - Static variable in class clickDetector.offlineFuncs.OfflineEventListPanel
Show only those events which overlap the current loaded click data.
SHOW_SPECTROGRAM - Static variable in class clickDetector.NewClickOverlayGraphics
 
showAll - Variable in class clickDetector.dialogs.ClickDisplayDialog.SpeciesPanel
 
showAll - Variable in class clickDetector.dialogs.ClickMapDialog
 
showAll - Variable in class clickDetector.offlineFuncs.OfflineEventListPanel
 
showAmplitude - Variable in class clickDetector.ClickToolBar
 
showAmplitude - Variable in class clickDetector.dialogs.ClickDisplayDialog
 
showArrayDialog(Frame) - Static method in class Array.ArrayManager
 
showArrow - Variable in class GPS.GPSParametersDialog.PredictPanel
 
showAtStart - Variable in class tipOfTheDay.TipOfTheDayManager
 
showAtStartup - Variable in class tipOfTheDay.PamTipViewer
 
showBars() - Method in class SoundRecorder.RecorderTabPanel.RecorderPanel.LevelsPanel
 
showBearing - Variable in class clickDetector.ClickToolBar
 
showBearing - Variable in class clickDetector.dialogs.ClickDisplayDialog
 
showChannels() - Method in class PamView.GroupedSourcePanel
 
showChannels() - Method in class PamView.SourcePanel
 
showCheckbox - Variable in class likelihoodDetectionModule.CheckRenderer
The show checkbox.
showClick(ClickDetection) - Method in class clickDetector.ClickSpectrum
 
showClick(ClickDetection) - Method in class clickDetector.ClickWaveform
 
showComponents() - Method in class videoRangePanel.VRTabPanelControl
 
showConfusion - Variable in class whistleClassifier.WhistleClassificationDialog.SpeciesPanel
 
showControlledUnit(PamControlledUnit) - Method in class PamController.PamController
 
showControlledUnit(PamControlledUnit) - Method in class PamView.GuiFrameManager
 
showControlledUnit(PamControlledUnit) - Method in class PamView.PamGui
 
showControlledUnit(PamControlledUnit) - Method in class PamView.PamObjectViewer
 
showControlledUnit(PamControlledUnit) - Method in class PamView.PamView
tells the view to show the main display panel of a pamControlledUnit
showControlledUnit(PamControlledUnit) - Method in interface PamView.PamViewInterface
 
showControls() - Method in class PamUtils.LatLongDialogStrip
 
showCurrent - Variable in class clickDetector.offlineFuncs.OfflineEventListPanel
 
showDetector - Variable in class radardisplay.RadarParameters
 
showDetector - Variable in class Spectrogram.SpectrogramParameters
 
showDialog(Frame, AcquisitionControl, AcquisitionParameters) - Static method in class Acquisition.AcquisitionDialog
Shows the data acquisition dialog.
showDialog(Window, FolderInputSystem) - Static method in class Acquisition.CheckWavFileHeaders
 
showDialog(Window, OfflineFileServer) - Static method in class Acquisition.offlineFuncs.FileMapMakingdialog
 
showDialog(Frame, AirgunParameters) - Static method in class AirgunDisplay.AirgunParametersDialog
 
showDialog(Frame, AISParameters) - Static method in class AIS.AISDisplayDialog
 
showDialog(Frame, AISParameters) - Static method in class AIS.AISSettingsDialog
 
showDialog(Frame, AmpParameters, AmpControl) - Static method in class amplifier.AmpDialog
 
showDialog(Frame, AngleControl, AngleParameters) - Static method in class angleMeasurement.AngleCalibrationDialog
 
showDialog(Frame, FluxgateWorldAngles, FluxgateWorldParameters) - Static method in class angleMeasurement.FluxgateWorldDialog
 
showDialog(Frame, AngleVeto) - Static method in class angleVetoes.AngleVetoDialog
 
showDialog(Frame, AngleVetoes) - Static method in class angleVetoes.AngleVetoesDialog
 
showDialog(Frame) - Static method in class Array.ArrayDialog
Open main dialog for hydrophone array configuration
showDialog(Window, Hydrophone, boolean, PamArray) - Static method in class Array.HydrophoneElementDialog
 
showDialog(Window, Streamer) - Static method in class Array.StreamerDialog
 
showDialog(Frame, BeakedControl, BeakedParameters) - Static method in class beakedWhaleProtocol.BeakedDialog
 
showDialog(BeakedControl, VRDataUnit) - Static method in class beakedWhaleProtocol.BeakedLocationDialog
 
showDialog(Window) - Static method in class binaryFileStorage.BinaryMapMakingDialog
 
showDialog(Frame, BinaryStoreSettings) - Static method in class binaryFileStorage.BinaryStorageDialog
 
showDialog(Frame, BasicClickIdParameters, ClickTypeParams) - Static method in class clickDetector.ClickClassifiers.basic.ClickTypeDialog
 
showDialog(Window, SweepClassifier, SweepClassifierSet) - Static method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog
 
showDialog(ClickControl, Frame, ClickParameters) - Static method in class clickDetector.ClickClassifiers.ClickClassifyDialog
 
showDialog(Frame, BasicClickIdParameters, float) - Static method in class clickDetector.ClickClassifiers.ClickTypesDialog
 
showDialog(Window, Point, ClickSpectrum, ClickSpectrumParams) - Static method in class clickDetector.ClickSpectrumDialog
 
showDialog(ClickControl, Frame, BTDisplayParameters) - Static method in class clickDetector.dialogs.ClickDisplayDialog
 
showDialog(Frame, ClickParameters) - Static method in class clickDetector.dialogs.ClickMapDialog
 
showDialog(Frame, ClickControl, ClickParameters) - Static method in class clickDetector.dialogs.ClickParamsDialog
 
showDialog(Frame, ClickParameters) - Static method in class clickDetector.dialogs.ClickStorageOptionsDialog
 
showDialog(Frame, ClickParameters) - Static method in class clickDetector.dialogs.ClickTrainIdDialog
 
showDialog(Window, ClickWaveform, ClickParameters) - Static method in class clickDetector.dialogs.WaveDisplayDialog
 
showDialog(Window, ClickControl, BinaryStore) - Static method in class clickDetector.offlineFuncs.BatchFileConversion
 
showDialog(Window, OfflineEventDataUnit) - Static method in class clickDetector.offlineFuncs.EditOfflineEventDialog
 
showDialog(Window, ClickControl) - Static method in class clickDetector.offlineFuncs.EventListDialog
 
showDialog(Window, ClickControl, ClickBTDisplay) - Static method in class clickDetector.offlineFuncs.LabelClicksDialog
 
showDialog(Window, ClickControl, ClickBTDisplay) - Static method in class clickDetector.offlineFuncs.OfflienEventViewer
 
showDialog(Window, ClickControl, OfflineEventDataUnit) - Static method in class clickDetector.offlineFuncs.OfflineEventDialog
 
showDialog(Window, ClickControl, ClickBTDisplay) - Static method in class clickDetector.offlineFuncs.OfflineEventViewer
 
showDialog(Window, ClicksOffline) - Static method in class clickDetector.offlineFuncs.OfflineReanalDialog
 
showDialog(Frame, Point, WignerPlotOptions) - Static method in class clickDetector.WignerPlotdialog
 
showDialog(Frame, DecimatorControl, DecimatorParams) - Static method in class decimator.DecimatorParamsDialog
 
showDialog(DepthControl, Frame, DepthSystem) - Static method in class depthReadout.DepthDialog
 
showDialog(DepthControl, MccDepthSystem, Frame, MccDepthParameters) - Static method in class depthReadout.MccDialog
 
showDialog(Frame, EdgeParameters) - Static method in class EdgeDetector.EdgeParamsDialog
 
showDialog(Frame, FFTParameters, SpectrogramNoiseProcess) - Static method in class fftManager.FFTParametersDialog
 
showDialog() - Method in class fftManager.FFTPluginPanelProvider.FFTPluginPanel
 
showDialog(Frame, FFTPluginPanelProvider.FFTPluginPanel, FFTDataDisplayOptions) - Static method in class fftManager.FFTPluginParamsDialog
 
showDialog(FilterParameters_2, Frame, PamDataBlock) - Static method in class Filters.FilterDataSourceDialog
 
showDialog(Frame, FilterParams, float) - Static method in class Filters.FilterDialog
 
showDialog(DBControl, Frame, DBParameters) - Static method in class generalDatabase.DBDialog
 
showDialog(Frame) - Static method in class generalDatabase.DBMapMakingDialog
 
showDialog(Window, LookupList) - Static method in class generalDatabase.lookupTables.LookupEditDialog
 
showDialog(Frame, GPSParameters) - Static method in class GPS.GPSParametersDialog
 
showDialog(Frame, GPSControl, GPSParameters, boolean) - Static method in class GPS.UpdateClockDialog
Show the UpdateClock dialog
showDialog(Frame, KernelSmoothingParameters, PamDataBlock) - Static method in class KernelSmoothing.KernelSmoothingDialog
 
showDialog(Frame, LandmarkControl, LandmarkData) - Static method in class landMarks.LandmarkDialog
 
showDialog(Frame, LandmarkControl) - Static method in class landMarks.LandmarksDialog
 
showDialog(Frame, LikelihoodDetectionParameters) - Static method in class likelihoodDetectionModule.LikelihoodDetectionParametersDialog
Show dialog the dialog.
showDialog() - Method in class likelihoodDetectionModule.NewBandNameDialog
Show dialog.
showDialog() - Method in class likelihoodDetectionModule.TargetConfigurationNameDialog
Show dialog.
showDialog(ListeningControl, Frame, ListeningParameters) - Static method in class listening.ListeningDialog
 
showDialog(Frame, TowedArray3DController, TowedArray3DProcessParameters) - Static method in class loc3d_Thode.TowedArray3DParametersDialog
 
showDialog(Frame, MapPanel, Point, MapComment) - Static method in class Map.MapCommentDialog
 
showDialog(Frame, MapDetectionsManager) - Static method in class Map.MapDetectionsDialog
 
showDialog(Frame, MapParameters, MapFileManager) - Static method in class Map.MapParametersDialog
 
showDialog(Frame, NMEAParameters) - Static method in class NMEA.NMEAParametersDialog
 
showDialog(Frame, NMEAParameters) - Static method in class NMEA.NMEASimDialog
 
showDialog(Frame, NMEAFrontEnd) - Static method in class nmeaEmulator.NMEAOutdialog
 
showDialog(Window, NMEAEmulatorParams) - Static method in class nmeaEmulator.TimesDialog
 
showDialog(NoiseControl, Frame, NoiseSettings) - Static method in class noiseMonitor.NoiseDialog
 
showDialog(Window, NoiseControl) - Static method in class noiseMonitor.NoiseDisplayDialog
 
showDialog(Window, NoiseMeasurementBand, FFTDataBlock) - Static method in class noiseMonitor.UserBandDialog
 
showDialog(PamController, Frame) - Static method in class PamController.ModuleOrderDialog
 
showDialog(Frame, PamModuleInfo, String) - Static method in class PamController.NewModuleDialog
 
showDialog(Frame, SettingsFileData) - Static method in class PamController.SettingsFileDialog
 
showDialog(Frame, String, Matrix, String[], String[]) - Static method in class pamMaths.MatrixDialog
 
showDialog(Window, String, String, String) - Static method in class PamModel.DeprecatedModuleDialog
 
showDialog(JFrame, PamModelSettings) - Static method in class PamModel.ThreadingDialog
 
showDialog(Window) - Static method in class pamScrollSystem.LoadingDataDialog
 
showDialog(Window, AbstractPamScroller, JComponent) - Static method in class pamScrollSystem.LoadOptionsDialog
 
showDialog(Frame, LatLong, String) - Static method in class PamUtils.LatLongDialog
 
showDialog(Frame, LatLong) - Static method in class PamUtils.LatLongDialog
 
showDialog(String, String, int) - Method in class PamView.PamGui
 
showDialog(Frame, PamViewParameters) - Static method in class PamView.ViewTimesDialog
 
showDialog(Frame, PatchPanelParameters, PatchPanelControl) - Static method in class patchPanel.PatchPanelDialog
 
showDialog(Frame) - Static method in class performanceTests.PerformanceDialog
 
showDialog(Frame, RadarParameters, RadarProjector) - Static method in class radardisplay.RadarParametersDialog
 
showDialog(Frame, RoccaParameters, RoccaControl) - Static method in class rocca.RoccaParametersDialog
 
showDialog(Frame, VetoParameters, PamDataBlock) - Static method in class seismicVeto.VetoParametersDialog
 
showDialog(Frame, SimProcess, SimObject) - Static method in class simulatedAcquisition.SimObjectDialog
 
showDialog(Frame, PlaybackParameters, PlaybackControl) - Static method in class soundPlayback.PlaybackDialog
 
showDialog(Frame, RecorderSettings) - Static method in class SoundRecorder.RecorderSettingsDialog
 
showDialog(Window, SpectrogramParameters) - Static method in class Spectrogram.SpectrogramParamsDialog
 
showDialog(Frame, SpectrogramNoiseProcess, SpectrogramNoiseSettings) - Static method in class spectrogramNoiseReduction.SpectrogramNoiseDialog
 
showDialog(Frame, TerrellaParameters) - Static method in class terrella.TerrellaParametersDialog
 
showDialog(Frame, VRControl, VRMeasurement) - Static method in class videoRangePanel.AcceptMeasurementDialog
 
showDialog(Frame, VRHeightData) - Static method in class videoRangePanel.HeightDialog
 
showDialog(Frame, VRControl, VRCalibrationData) - Static method in class videoRangePanel.VRCalibrationDialog
 
showDialog(Frame, VRControl) - Static method in class videoRangePanel.VRParametersDialog
 
showDialog(Frame, WhistleClassifierControl) - Static method in class whistleClassifier.ClassifierTrainingDialog
 
showDialog(Frame, WhistleClassifierControl) - Static method in class whistleClassifier.training.ClassifierTrainingDialog
 
showDialog(Frame, WhistleClassifierControl) - Static method in class whistleClassifier.WhistleClassificationDialog
 
showDialog(Frame, WhistleControl, WhistleParameters, float) - Static method in class whistleDetector.WhistleParametersDialog
 
showDialog(Frame, WhistleMoanControl) - Static method in class whistlesAndMoans.WhistleToneDialog
 
showDialog(Frame, WhitesWhistleControl) - Static method in class whitesWhistleDetector.WhitesDialog
 
showDialog(Frame, WorkshopProcessParameters) - Static method in class WorkshopDemo.WorkshopParametersDialog
 
showDialog2(Frame, EnergySumParams) - Static method in class IshmaelDetector.EnergySumParamsDialog
 
showDialog2(Frame, MatchFiltParams) - Static method in class IshmaelDetector.MatchFiltParamsDialog
 
showDialog2(Frame, SgramCorrParams) - Static method in class IshmaelDetector.SgramCorrParamsDialog
 
showDialog2(Frame, IshLocHyperbParams, PamDataBlock) - Static method in class IshmaelLocator.IshLocHyperbParamsDialog
 
showDialog3(Frame, IshDetParams, IshDetParamsDialog) - Static method in class IshmaelDetector.IshDetParamsDialog
 
showDialog3(Frame, IshLocParams, IshLocParamsDialog) - Static method in class IshmaelLocator.IshLocParamsDialog
 
showEchoes - Variable in class clickDetector.BTDisplayParameters
 
showEnvelope - Variable in class clickDetector.dialogs.WaveDisplayDialog
 
showExclusion - Variable in class AirgunDisplay.AirgunParametersDialog.ExclusionPanel
 
showExclusionZone - Variable in class AirgunDisplay.AirgunParameters
Show exclusion zone on the map
showFileList - Variable in class PamController.SettingsFileData
 
showGpsData - Variable in class Map.MapParameters
 
showGpsMenu - Variable in class Map.MapPanel
 
showGraphMenu(MouseEvent) - Method in class dataMap.DataStreamPanel
 
showGrid - Variable in class noiseMonitor.NoiseDisplayDialog
 
showGrid - Variable in class noiseMonitor.NoiseSettings
 
showHeldAngle(AngleDataUnit) - Method in class angleMeasurement.AngleSidePanel
 
showHideChannelPanel() - Method in class Acquisition.AcquisitionDialog
Only need to show the channel panel for certain device types,
showHideGraph() - Method in class dataMap.ScrollingDataPanel
 
showHoverItem() - Method in class PamView.GeneralProjector.MouseHoverAdapter
 
showHydrophones - Variable in class Map.MapParameters
A flag to enable/disable drawing of the hydrophone array on the map
showHydrophones - Variable in class Map.MapParametersDialog
 
showICI - Variable in class clickDetector.ClickToolBar
 
showICI - Variable in class clickDetector.dialogs.ClickDisplayDialog
 
showInfo() - Method in class GPS.GPSParametersDialog.ReadOptions
 
showKey - Variable in class clickDetector.BTDisplayParameters
 
showKey - Variable in class Map.MapParameters
 
showKeyMenu - Variable in class Map.MapPanel
 
showLatLong() - Method in class PamUtils.LatLongDialog
 
showLevel(int, double) - Method in class SoundRecorder.RecorderTabPanel.RecorderPanel.LevelsPanel
 
showLine - Variable in class beakedWhaleProtocol.BeakedDialog
 
showLine - Variable in class beakedWhaleProtocol.BeakedParameters
 
showLoadPeriod(Graphics) - Method in class dataMap.DataStreamPanel.DataGraph
Draw on the chart the period of data loaded into memory.
showlocflag - Variable in class ishmaelComms.Client
 
showlocflag - Variable in class ishmaelComms.ProcessIshmaelData.Client
 
showMapObjects() - Method in class Map.SimpleMap
 
showMenu(MouseEvent) - Method in class clickDetector.ClickSpectrum.MouseFuncs
 
showMenu(MouseEvent) - Method in class clickDetector.WignerPlot.MouseFuncs
 
showMenu(MouseEvent) - Method in class noiseMonitor.NoiseTabPanel
 
showMenu - Variable in class pamScrollSystem.AbstractPamScroller
 
showMenuButtonPopup(MouseEvent) - Method in class pamScrollSystem.AbstractPamScroller
Show standard menu for mouse right click on the middle options button.
showMouseData(Point, Point) - Method in class Map.MouseMeasureDisplay
 
shownComponent - Variable in class PamView.PamObjectViewer.ViewGroupInfo
 
showNone - Variable in class clickDetector.dialogs.ClickMapDialog
 
showNonSpecies - Variable in class clickDetector.BTDisplayParameters
 
ShowObjectList() - Static method in class PamView.PamObjectList
 
showOfflineEvents(Frame) - Method in class clickDetector.ClickControl
Show a list of offline events.
showPanZoom - Variable in class Map.MapParameters
 
showParams() - Method in class Filters.FilterDataSourceDialog
 
showParamsDialog(Frame) - Method in class fftManager.PamFFTControl
 
showParamsDialog(Frame) - Method in class terrella.TerrellaControl
 
showParamsDialog1(Frame) - Method in class IshmaelDetector.EnergySumControl
 
showParamsDialog1(Frame) - Method in class IshmaelDetector.IshDetControl
 
showParamsDialog1(Frame) - Method in class IshmaelDetector.MatchFiltControl
 
showParamsDialog1(Frame) - Method in class IshmaelDetector.SgramCorrControl
 
showPhones() - Method in class terrella.TerrellaParametersDialog.TerrellaDimensions
 
showPluginDisplay - Variable in class Spectrogram.SpectrogramParameters
 
showPopup(MouseEvent) - Method in class dataMap.DataStreamPanel.GraphMouse
 
showPopup(MouseEvent) - Method in class likelihoodDetectionModule.TreeTable.TreeMouseListener
Show popup.
showPopupMenu(MouseEvent) - Method in class clickDetector.offlineFuncs.EventListDialog
 
showPopupMenu(MouseEvent) - Method in class dataMap.SettingsStrip
 
showPopupMenu(MouseEvent) - Method in class generalDatabase.lookupTables.LookupComponent
 
showPredictionArrow - Variable in class AIS.AISParameters
 
showProcesslessModules - Variable in class PamView.PamObjectViewer
 
showProcesslessModules - Variable in class PamView.PamObjectViewerSettings
 
showProcesslessObservers - Variable in class PamView.PamObjectViewer
 
showProcesslessObservers - Variable in class PamView.PamObjectViewerSettings
 
showRows() - Method in class amplifier.AmpDialog
 
showrows() - Method in class patchPanel.PatchPanelDialog
 
showSampleSettingsDialog(AcquisitionDialog) - Method in class Acquisition.DaqSystem
 
showSampleSettingsDialog(AcquisitionDialog) - Method in class asiojni.ASIOSoundSystem
 
showScale - Variable in class Spectrogram.SpectrogramParameters
 
showScrollBars(boolean) - Method in class videoRangePanel.VRPanel
 
showShore - Variable in class videoRangePanel.VRParameters
draw the shore line on the map
showShorePoints - Variable in class videoRangePanel.VRParameters
also highlight points on the map file (to check resolution).
showShortTrains - Variable in class clickDetector.ClickParameters
 
showSidePanel() - Method in class PamView.PamGui
 
showSome - Variable in class clickDetector.dialogs.ClickMapDialog
 
showSpeciesList - Variable in class clickDetector.BTDisplayParameters
 
showStats - Variable in class pamMaths.HistogramDisplay
 
showString(char[]) - Method in class nidaqdev.Nidaq
Mostly used as a callback from the C side to show string messages
showSubFolderOption - Variable in class PamUtils.SelectFolder
 
ShowTabSpecificSettings() - Method in class PamView.PamGui
Set up specific settings for the tab - get's called quite a lot, including whenever modules are added or removed in order to make sure that menus contain the correct options for existing modules.
showTail - Variable in class AIS.AISDisplayDialog
 
showTail - Variable in class AIS.AISParameters
 
ShowTime() - Method in class clickDetector.ClickBTDisplay.TopControls
Only used in real time ops.
showTimes - Variable in class Map.MapDetectionsDialog
 
showTip(TipOfTheDayManager, Window, PamTip) - Static method in class tipOfTheDay.PamTipViewer
 
showTip(Window, PamTip) - Method in class tipOfTheDay.TipOfTheDayManager
 
showTipAtStartup - Variable in class PamController.SettingsFileData
 
showTopStrip() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.IdBlock
 
showTriggerBoxes(int) - Method in class clickDetector.dialogs.ClickParamsDialog
 
showVRTab() - Method in class videoRangePanel.VRControl
Force the video range tab to be selected.
showWarning(String) - Method in class PamView.PamDialog
Display a warning message with a default title
showWarning(Window, String, String) - Static method in class PamView.PamDialog
 
showWarning(String, String) - Method in class PamView.PamDialog
Display a warning message with given title and text
showWaveform - Variable in class Spectrogram.SpectrogramParameters
Also show the waveform display under the spectrogram
sidePanel - Variable in class clickDetector.ClickSidePanel
 
sidePanel - Variable in class eventCounter.DataCounter
 
sidePanel - Variable in class PamController.PamControlledUnit
Optional additional graphics component to be displayed to the left of the main tab panel control.
sidePanel - Variable in class PamView.PamGui
 
sidePanel - Variable in class rocca.RoccaSidePanel
 
sidePanel - Variable in class SoundRecorder.RecorderSidePanel
 
sidePanel - Variable in class UserInput.UserInputSidePanel
 
sidePanel - Variable in class whistleDetector.WhistleSidePanel
 
sides - Variable in class radardisplay.RadarParameters
 
sides - Variable in class radardisplay.RadarParametersDialog.StylePanel
 
SIDES_ALL - Static variable in class radardisplay.RadarParameters
 
SIDES_BACKHALF - Static variable in class radardisplay.RadarParameters
 
SIDES_FRONTHALF - Static variable in class radardisplay.RadarParameters
 
SIDES_LEFTHALF - Static variable in class radardisplay.RadarParameters
 
SIDES_RIGHTHALF - Static variable in class radardisplay.RadarParameters
 
sig - Variable in class simulatedAcquisition.ImpulseSignal
 
sig - Variable in class Stats.LinFit
 
siga - Variable in class Stats.LinFit
 
sigb - Variable in class Stats.LinFit
 
sigdat - Variable in class Stats.LinFit
 
sightingNum - Variable in class rocca.RoccaSidePanel
 
sightNum - Variable in class rocca.RoccaSightingDataUnit
 
signal - package signal
 
signal - Variable in class likelihoodDetectionModule.normalizer.NormalizedData
 
Signal - Variable in class whistleDetector.WhistlePeak
 
signalAlpha - Variable in class likelihoodDetectionModule.normalizer.DecayingAverageNormAlphas
 
signalAverager - Variable in class likelihoodDetectionModule.normalizer.DecayingAverageNorm.ExponentialAveragerPair
 
SignalBand - Class in likelihoodDetectionModule
Represents the parameters that make up a signal band, used as input to the Likelihood detection algorithm.
SignalBand(AcquisitionSettings, LikelihoodFFTParameters) - Constructor for class likelihoodDetectionModule.SignalBand
Instantiates a new signal band.
signalBand - Variable in class likelihoodDetectionModule.thresholdDetector.Threshold
 
signalBandIndex - Variable in class likelihoodDetectionModule.thresholdDetector.Threshold
 
signalBandNames - Variable in class likelihoodDetectionModule.TreeTableModel
The signal band names.
SignalBandNode - Class in likelihoodDetectionModule
Represents a signal band within a TargetConfiguration.
SignalBandNode(String, String) - Constructor for class likelihoodDetectionModule.SignalBandNode
 
signalBands - Variable in class likelihoodDetectionModule.normalizer.NormalizerProcess
 
signalBands - Variable in class likelihoodDetectionModule.spectralEti.SpectralEtiProcess
 
signalBands - Variable in class likelihoodDetectionModule.TargetConfiguration
The signal bands.
signalBands - Variable in class likelihoodDetectionModule.thresholdDetector.FilteredDetectionWriter
 
signalBands - Variable in class likelihoodDetectionModule.thresholdDetector.ThresholdDetectorProcess
 
signalName - Variable in class simulatedAcquisition.SimObject
 
signalNode - Variable in class likelihoodDetectionModule.BackgroundNode
 
SignalNode - Class in likelihoodDetectionModule
Represents the signal seconds for a band.
SignalNode() - Constructor for class likelihoodDetectionModule.SignalNode
 
SignalNode(double, double, BackgroundNode, double) - Constructor for class likelihoodDetectionModule.SignalNode
 
signalSeconds - Variable in class likelihoodDetectionModule.GuardBand
The signal seconds.
signalSeconds - Variable in class likelihoodDetectionModule.SignalBand
The signal seconds.
signalTimeConstant - Variable in class likelihoodDetectionModule.normalizer.NormalizerProcessTimeConstants
 
signalWidth - Variable in class likelihoodDetectionModule.normalizer.SplitWindowNormWidths
 
SILIB - Static variable in class asiojni.AsioJniInterface
 
SILIB - Static variable in class backendCInterfase.BackendManager
 
SILIB - Static variable in class mcc.MccJniInterface
 
SILIB - Static variable in class nidaqdev.Nidaq
 
SILIB - Static variable in class PamModel.PamProfiler
 
SILIB - Static variable in class PamUtils.SystemTiming
 
SILIB2 - Static variable in class asiojni.AsioJniInterface
 
SILIB2 - Static variable in class PamModel.PamProfiler
 
simAIS - Variable in class NMEA.NMEASimDialog
 
SimDialogPanel - Class in simulatedAcquisition
 
SimDialogPanel(Frame, SimProcess) - Constructor for class simulatedAcquisition.SimDialogPanel
 
simdialogPanel - Variable in class simulatedAcquisition.SimProcess
 
SimDialogPanel.AddButton - Class in simulatedAcquisition
 
SimDialogPanel.AddButton() - Constructor for class simulatedAcquisition.SimDialogPanel.AddButton
 
SimDialogPanel.CopyButton - Class in simulatedAcquisition
 
SimDialogPanel.CopyButton() - Constructor for class simulatedAcquisition.SimDialogPanel.CopyButton
 
SimDialogPanel.EditButton - Class in simulatedAcquisition
 
SimDialogPanel.EditButton() - Constructor for class simulatedAcquisition.SimDialogPanel.EditButton
 
SimDialogPanel.RemoveButton - Class in simulatedAcquisition
 
SimDialogPanel.RemoveButton() - Constructor for class simulatedAcquisition.SimDialogPanel.RemoveButton
 
SimDialogPanel.SimTableData - Class in simulatedAcquisition
 
SimDialogPanel.SimTableData() - Constructor for class simulatedAcquisition.SimDialogPanel.SimTableData
 
SimDialogPanel.TableSelection - Class in simulatedAcquisition
 
SimDialogPanel.TableSelection() - Constructor for class simulatedAcquisition.SimDialogPanel.TableSelection
 
SimGraphics - Class in simulatedAcquisition
 
SimGraphics() - Constructor for class simulatedAcquisition.SimGraphics
 
simGraphics - Variable in class simulatedAcquisition.SimProcess
 
simMouseAdapter - Variable in class simulatedAcquisition.SimProcess
 
simNmeaGpsRadio - Variable in class NMEA.NMEAParametersDialog
 
SimObject - Class in simulatedAcquisition
Information on a single simulated object
SimObject() - Constructor for class simulatedAcquisition.SimObject
 
simObject - Variable in class simulatedAcquisition.SimObjectDataUnit
 
simObject - Variable in class simulatedAcquisition.SimObjectDialog
 
simObjectDataUnit - Variable in class simulatedAcquisition.SimObject
 
SimObjectDataUnit - Class in simulatedAcquisition
 
SimObjectDataUnit(SimProcess, SimObject, long) - Constructor for class simulatedAcquisition.SimObjectDataUnit
 
SimObjectDialog - Class in simulatedAcquisition
 
SimObjectDialog(Frame, SimProcess) - Constructor for class simulatedAcquisition.SimObjectDialog
 
simObjects - Variable in class simulatedAcquisition.SimParameters
 
SimObjectsDataBlock - Class in simulatedAcquisition
 
SimObjectsDataBlock(AcquisitionProcess) - Constructor for class simulatedAcquisition.SimObjectsDataBlock
 
simObjectsDataBlock - Variable in class simulatedAcquisition.SimProcess
 
simParameters - Variable in class simulatedAcquisition.SimDialogPanel
 
SimParameters - Class in simulatedAcquisition
Parameters for all simulated objects
SimParameters() - Constructor for class simulatedAcquisition.SimParameters
 
simParameters - Variable in class simulatedAcquisition.SimProcess
 
SimpleHydrophoneLocator - Class in Array
Some abstract class function for hydrophone location that are used by more concreate locators, in particular the StaticHydrophoneLocator and StraightHydrophoneLocators
SimpleHydrophoneLocator(PamArray) - Constructor for class Array.SimpleHydrophoneLocator
 
simpleLLD2PanelPoint(LatLongMinutes, LatLongMinutes, double, double, double, double, int, int) - Method in class Map.TransformUtilities
 
simpleMap - Variable in class Map.GpsTextDisplay
 
simpleMap - Variable in class Map.MapTabPanelControl
 
simpleMap - Variable in class Map.MouseMeasureDisplay
 
SimpleMap - Class in Map
Mainly a container for map objects, holding the main MapPanel and the right hand control items.
SimpleMap(MapController) - Constructor for class Map.SimpleMap
 
SimpleMap.MapMouseInputAdapter - Class in Map
 
SimpleMap.MapMouseInputAdapter() - Constructor for class Map.SimpleMap.MapMouseInputAdapter
 
SimpleMap.MapMouseMotionAdapter - Class in Map
 
SimpleMap.MapMouseMotionAdapter() - Constructor for class Map.SimpleMap.MapMouseMotionAdapter
 
SimpleMap.MouseWheelHandler - Class in Map
 
SimpleMap.MouseWheelHandler() - Constructor for class Map.SimpleMap.MouseWheelHandler
 
simpleMapGridResolution(double, double, double, LatLong) - Static method in class Map.TransformUtilities
 
simpleMapGridResolution(CoordsXY, double, LatLong) - Static method in class Map.TransformUtilities
 
simpleMapGridResolution(double, double, double, LatLongMinutes) - Static method in class Map.TransformUtilities
 
simpleMapGridResolution(CoordsXY, double, LatLongMinutes) - Static method in class Map.TransformUtilities
 
simpleMapRef - Variable in class Map.MapPanel
 
simplePane - Variable in class Spectrogram.SpectrogramDisplay.SpectrogramPlotPanel
 
simplex - Variable in class Localiser.MLGridBearingLocaliser
 
simProcess - Variable in class simulatedAcquisition.SimDialogPanel
 
simProcess - Variable in class simulatedAcquisition.SimObjectDataUnit
 
simProcess - Variable in class simulatedAcquisition.SimObjectDialog
 
SimProcess - Class in simulatedAcquisition
Simulation of simulated sound.
SimProcess(AcquisitionControl) - Constructor for class simulatedAcquisition.SimProcess
 
simProcess - Variable in class simulatedAcquisition.SimSignals
 
SimProcess.GenerationThread - Class in simulatedAcquisition
Generates data as fast as it can.
SimProcess.GenerationThread() - Constructor for class simulatedAcquisition.SimProcess.GenerationThread
 
SimProcess.SimMouseAdapter - Class in simulatedAcquisition
 
SimProcess.SimMouseAdapter() - Constructor for class simulatedAcquisition.SimProcess.SimMouseAdapter
 
simProgress - Variable in class nmeaEmulator.InfoPanel
 
simSignal - Variable in class simulatedAcquisition.SimObjectDataUnit
 
SimSignal - Class in simulatedAcquisition
Class to hold information and generate a signal of a specific type
SimSignal() - Constructor for class simulatedAcquisition.SimSignal
 
simSignalList - Variable in class simulatedAcquisition.SimSignals
 
simSignals - Variable in class simulatedAcquisition.SimProcess
 
SimSignals - Class in simulatedAcquisition
Class to list and manage different types of signals.
SimSignals(SimProcess) - Constructor for class simulatedAcquisition.SimSignals
 
SimSound - Class in simulatedAcquisition
Class to hold information on a single sound.
SimSound(long, long, LatLong, double, double[]) - Constructor for class simulatedAcquisition.SimSound
 
simSounds - Variable in class simulatedAcquisition.SimObjectDataUnit
 
simStartHeading - Variable in class NMEA.NMEAParameters
 
simStartLatitude - Variable in class NMEA.NMEAParameters
 
simStartLongitude - Variable in class NMEA.NMEAParameters
 
simStartSpeed - Variable in class NMEA.NMEAParameters
 
simTable - Variable in class simulatedAcquisition.SimDialogPanel
 
simTableData - Variable in class simulatedAcquisition.SimDialogPanel
 
simThread - Variable in class NMEA.NMEAParameters
 
simTime - Variable in class nmeaEmulator.EmulatedData
 
simTime - Variable in class nmeaEmulator.InfoPanel
 
simTimeInterval - Variable in class NMEA.NMEAParameters
 
simulatedAcquisition - package simulatedAcquisition
 
simulatedDataBlocks - Variable in class nmeaEmulator.NMEAFrontEnd
 
simulatedPortSettings - Variable in class NMEA.NMEAParametersDialog
 
simulatedTerrellaPanel - Variable in class terrella.TerrellaParametersDialog
 
simulatedUnits - Variable in class nmeaEmulator.NMEAFrontEnd
 
simulatedValue - Variable in enum NMEA.NMEAParameters.NmeaSources
 
simWorker - Variable in class nmeaEmulator.NMEAFrontEnd
 
singleClick - Variable in class clickDetector.offlineFuncs.ClicksOffline.QuickAddClicks
 
singleClicked(MouseEvent) - Method in class PamView.zoomer.Zoomer.ZoomerMouse
 
singleInstance - Static variable in class Acquisition.AcquisitionDialog
 
singleInstance - Static variable in class Acquisition.CheckWavFileHeaders
 
singleInstance - Static variable in class Acquisition.offlineFuncs.FileMapMakingdialog
 
singleInstance - Static variable in class AIS.AISSettingsDialog
 
singleInstance - Static variable in class AIS.AISStringsTable
 
singleInstance - Static variable in class amplifier.AmpDialog
 
singleInstance - Static variable in class angleMeasurement.AngleCalibrationDialog
 
singleInstance - Static variable in class angleMeasurement.FluxgateWorldDialog
 
singleInstance - Static variable in class angleVetoes.AngleVetoDialog
 
singleInstance - Static variable in class angleVetoes.AngleVetoesDialog
 
singleInstance - Static variable in class Array.ArrayDialog
 
singleInstance - Static variable in class Array.ArrayManager
 
singleInstance - Static variable in class Array.HydrophoneElementDialog
 
singleInstance - Static variable in class Array.HydrophoneLocators
 
singleInstance - Static variable in class Array.StreamerDialog
 
singleInstance - Static variable in class backendCInterfase.BackendManager
 
singleInstance - Static variable in class beakedWhaleProtocol.BeakedDialog
 
singleInstance - Static variable in class beakedWhaleProtocol.BeakedLocationDialog
 
singleInstance - Static variable in class binaryFileStorage.BinaryMapMakingDialog
 
singleInstance - Static variable in class binaryFileStorage.BinaryStorageDialog
 
singleInstance - Static variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog
 
singleInstance - Static variable in class clickDetector.ClickClassifiers.ClickClassifyDialog
 
singleInstance - Static variable in class clickDetector.ClickSpectrumDialog
 
singleInstance - Static variable in class clickDetector.dialogs.ClickDisplayDialog
 
singleInstance - Static variable in class clickDetector.dialogs.ClickMapDialog
 
singleInstance - Static variable in class clickDetector.dialogs.ClickParamsDialog
 
singleInstance - Static variable in class clickDetector.dialogs.ClickStorageOptionsDialog
 
singleInstance - Static variable in class clickDetector.dialogs.ClickTrainIdDialog
 
singleInstance - Static variable in class clickDetector.dialogs.WaveDisplayDialog
 
singleInstance - Static variable in class clickDetector.offlineFuncs.BatchFileConversion
 
singleInstance - Static variable in class clickDetector.offlineFuncs.EditOfflineEventDialog
 
singleInstance - Static variable in class clickDetector.offlineFuncs.EventListDialog
 
singleInstance - Static variable in class clickDetector.offlineFuncs.LabelClicksDialog
 
singleInstance - Static variable in class clickDetector.offlineFuncs.OfflienEventViewer
 
singleInstance - Static variable in class clickDetector.offlineFuncs.OfflineEventDialog
 
singleInstance - Static variable in class clickDetector.offlineFuncs.OfflineEventViewer
 
singleInstance - Static variable in class clickDetector.offlineFuncs.OfflineReanalDialog
 
singleInstance - Static variable in class clickDetector.WignerPlotdialog
 
singleInstance - Static variable in class decimator.DecimatorParamsDialog
 
singleInstance - Static variable in class depthReadout.DepthDialog
 
singleInstance - Static variable in class depthReadout.MccDialog
 
singleInstance - Static variable in class EdgeDetector.EdgeParamsDialog
 
singleInstance - Static variable in class fftManager.FFTParametersDialog
 
singleInstance - Static variable in class Filters.FilterDataSourceDialog
 
singleInstance - Static variable in class Filters.FilterDialog
 
singleInstance - Static variable in class generalDatabase.DBDialog
 
singleInstance - Static variable in class generalDatabase.DBMapMakingDialog
 
singleInstance - Static variable in class generalDatabase.lookupTables.LookupEditDialog
 
singleInstance - Static variable in class generalDatabase.lookupTables.LookUpTables
 
singleInstance - Static variable in class GPS.UpdateClockDialog
 
singleInstance - Static variable in class IshmaelDetector.EnergySumParamsDialog
 
singleInstance - Static variable in class IshmaelDetector.MatchFiltParamsDialog
 
singleInstance - Static variable in class IshmaelDetector.SgramCorrParamsDialog
 
singleInstance - Static variable in class IshmaelLocator.IshLocHyperbParamsDialog
 
singleInstance - Static variable in class KernelSmoothing.KernelSmoothingDialog
 
singleInstance - Static variable in class landMarks.LandmarkDialog
 
singleInstance - Static variable in class landMarks.LandmarksDialog
 
singleInstance - Static variable in class likelihoodDetectionModule.LikelihoodDetectionParametersDialog
The single instance of the dialog.
singleInstance - Static variable in class listening.ListeningDialog
 
singleInstance - Static variable in class loc3d_Thode.TowedArray3DParametersDialog
 
singleInstance - Static variable in class Map.MapCommentDialog
 
singleInstance - Static variable in class Map.MapParametersDialog
 
singleInstance - Static variable in class NMEA.NMEAParametersDialog
 
singleInstance - Static variable in class NMEA.NMEAStringsTable
 
singleInstance - Static variable in class nmeaEmulator.NMEAOutdialog
 
singleInstance - Static variable in class nmeaEmulator.TimesDialog
 
singleInstance - Static variable in class noiseMonitor.NoiseDialog
 
singleInstance - Static variable in class noiseMonitor.NoiseDisplayDialog
 
singleInstance - Static variable in class noiseMonitor.UserBandDialog
 
singleInstance - Static variable in class PamController.AWTScheduler
 
singleInstance - Static variable in class PamController.ModuleOrderDialog
 
singleInstance - Static variable in class PamController.SettingsFileDialog
 
singleInstance - Static variable in class pamScrollSystem.AbstractScrollManager
 
singleInstance - Static variable in class PamUtils.LatLongDialog
 
singleInstance - Static variable in class PamView.ObserverListPopup
 
singleInstance - Static variable in class PamView.PamColors
 
singleInstance - Static variable in class PamView.PamHelp
 
singleInstance - Static variable in class PamView.PamObjectViewer
 
singleInstance - Static variable in class PamView.PamSymbolManager
 
singleInstance - Static variable in class PamView.ViewTimesDialog
 
singleInstance - Static variable in class patchPanel.PatchPanelDialog
 
singleInstance - Static variable in class radardisplay.RadarParametersDialog
 
singleInstance - Static variable in class rocca.RoccaParametersDialog
 
singleInstance - Static variable in class seismicVeto.VetoParametersDialog
 
singleInstance - Static variable in class simulatedAcquisition.SimObjectDialog
 
singleInstance - Static variable in class soundPlayback.PlaybackDialog
 
singleInstance - Static variable in class SoundRecorder.RecorderSettingsDialog
 
singleInstance - Static variable in class Spectrogram.SpectrogramParamsDialog
 
singleInstance - Static variable in class spectrogramNoiseReduction.SpectrogramNoiseDialog
 
singleInstance - Static variable in class Stats.LinFit
 
singleInstance - Static variable in class terrella.SerialParametersDialogPanel
 
singleInstance - Static variable in class terrella.TerrellaParametersDialog
 
singleInstance - Static variable in class tipOfTheDay.PamTipViewer
 
singleInstance - Static variable in class tipOfTheDay.TipOfTheDayManager
 
singleInstance - Static variable in class videoRangePanel.AcceptMeasurementDialog
 
singleInstance - Static variable in class videoRangePanel.HeightDialog
 
singleInstance - Static variable in class videoRangePanel.VRCalibrationDialog
 
singleInstance - Static variable in class videoRangePanel.VRParametersDialog
 
singleInstance - Static variable in class whistleClassifier.ClassifierTrainingDialog
 
singleInstance - Static variable in class whistleClassifier.training.ClassifierTrainingDialog
 
singleInstance - Static variable in class whistleClassifier.WhistleClassificationDialog
 
singleInstance - Static variable in class whistleDetector.WhistleParametersDialog
 
singleInstance - Static variable in class whistlesAndMoans.WhistleToneDialog
 
singleInstance - Static variable in class whitesWhistleDetector.WhitesDialog
 
singleInstance - Static variable in class WorkshopDemo.WorkshopParametersDialog
 
singleThreadObserver - Variable in class PamguardMVC.ThreadedObserver
 
SingletonDataBlock<Tunit extends PamDataUnit> - Class in PamguardMVC
Version of pamdatablock that always keeps one and only one dataUnit.
SingletonDataBlock(Class, String, PamProcess, int) - Constructor for class PamguardMVC.SingletonDataBlock
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class AIS.AISBinaryDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class binaryFileStorage.BinaryDataSource
Convert data read back in in viewer mode into the correct type of PamDataUnit.
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class clickDetector.ClickBinaryDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class noiseMonitor.NoiseBinaryDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class whistlesAndMoans.WhistleBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class AIS.AISBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class binaryFileStorage.BinaryDataSource
Do something with module footer information
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class clickDetector.ClickBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class noiseMonitor.NoiseBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class whistlesAndMoans.WhistleBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class AIS.AISBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class binaryFileStorage.BinaryDataSource
Do something with module header information
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class clickDetector.ClickBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class noiseMonitor.NoiseBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class whistlesAndMoans.WhistleBinaryDataSource
 
sisterDataBlock - Variable in class binaryFileStorage.BinaryDataSource
 
sitInLoop() - Method in class PamController.NetworkController
Infinite loop.
six2eight(String, int) - Static method in class NMEA.NMEADataBlock
 
size() - Method in class landMarks.LandmarkDatas
 
size - Variable in class PamView.GuiParameters
 
size - Static variable in class PamView.PamSymbol.KeyPanel
 
sizePanel - Variable in class clickDetector.dialogs.ClickDisplayDialog
 
skipClickStructure(int) - Method in class clickDetector.RainbowFile
 
skipWavData(ClickDetection) - Method in class clickDetector.RainbowFile
 
sl - Variable in class PamUtils.LatLongDialogStrip
 
sleep_time - Variable in class terrella.TerrellaDataBlock
 
sleep_time - Variable in class terrella.TerrellaParameters
 
sleep_time - Variable in class terrella.TerrellaParametersDialog.TerrellaDimensions
 
sleep_time - Variable in class terrella.TerrellaStandardDataSetUnit
 
sliceCount - Variable in class IshmaelDetector.IshLogger
 
sliceCount - Variable in class whistleDetector.WhistleLogger
 
sliceData - Variable in class whistlesAndMoans.ConnectedRegion
 
SliceData - Class in whistlesAndMoans
 
SliceData(int, int, FFTDataUnit) - Constructor for class whistlesAndMoans.SliceData
Constructor to use when creating new slices during initial detection
SliceData(SliceData, int) - Constructor for class whistlesAndMoans.SliceData
Constructor to use when creating slices from a mother slice during whistle fragmentation.
SliceData(int, long, int[][]) - Constructor for class whistlesAndMoans.SliceData
Constructor for creating slices offline when read back from binary files.
sliceData - Variable in class whitesWhistleDetector.ConnectedRegion
 
SliceData - Class in whitesWhistleDetector
 
SliceData(int, int, FFTDataUnit) - Constructor for class whitesWhistleDetector.SliceData
 
sliceHeight - Variable in class whistlesAndMoans.ConnectedRegion
 
sliceHeight - Variable in class whitesWhistleDetector.ConnectedRegion
 
sliceIx - Variable in class IshmaelDetector.SgramCorrProcess.PerChannelInfo
 
sliceLength - Variable in class whistlesAndMoans.SliceData
 
sliceLength - Variable in class whitesWhistleDetector.SliceData
 
slicenumber - Variable in class whistleDetector.PeakDataUnit
 
sliceNumber - Variable in class whistleDetector.WhistlePeak
 
sliceNumber - Variable in class whistlesAndMoans.SliceData
 
sliceNumber - Variable in class whitesWhistleDetector.SliceData
 
slicePeaks - Variable in class whistlesAndMoans.DiscardingFragmenter
 
slicePixs - Variable in class whistlesAndMoans.SliceData
 
slicePixs - Variable in class whitesWhistleDetector.SliceData
 
slicesAnalysed - Variable in class whistleDetector.PeakDetector
 
slider - Variable in class pamScrollSystem.PamScrollSlider
 
SlidingAverager - Class in likelihoodDetectionModule.normalizer
A simple sliding block averager.
SlidingAverager(int, boolean) - Constructor for class likelihoodDetectionModule.normalizer.SlidingAverager
 
slope - Variable in class rocca.RoccaContourDataUnit
 
slopeR - Variable in class simulatedAcquisition.RandomWhistles
 
slowFindByDatabaseIndex(int) - Method in class PamguardMVC.PamDataBlock
Search all units in reverse order.
smallArray - Variable in class PamController.XMLTest.TestClass
 
smallStep - Variable in class videoRangePanel.ImageAnglePanel
 
smallWindow - Variable in class clickDetector.ClickDisplayManager.ClickDisplayInfo
 
smooth - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.LengthBlock
 
smoothBins - Variable in class clickDetector.ClickSpectrumDialog
 
smoothData - Variable in class clickDetector.ClickSpectrumDialog
 
smoothData(double[], int) - Static method in class Filters.SmoothingFilter
Smooth data with a moving average filter.
smoothData(int, Complex[]) - Method in class KernelSmoothing.KernelSmoothingProcess.SmoothingChannelProcess
 
smoothingChannelProcessList - Variable in class KernelSmoothing.KernelSmoothingProcess
 
smoothingControl - Variable in class KernelSmoothing.KernelSmoothingProcess
 
smoothingFactor - Variable in class fftManager.FFTDataDisplayOptions
 
smoothingFactorTextField - Variable in class fftManager.FFTPluginParamsDialog
 
SmoothingFilter - Class in Filters
Smoothing filter which is basically a moving abstract filter but it operates once on a finite amount of data and does not insert any delays (unlike MovingAveragefilter which handles infinite streams, but adds a delay)
SmoothingFilter() - Constructor for class Filters.SmoothingFilter
 
smoothingParameters - Variable in class KernelSmoothing.KernelSmoothingControl
 
smoothingParameters - Static variable in class KernelSmoothing.KernelSmoothingDialog
 
smoothingProcess - Variable in class KernelSmoothing.KernelSmoothingControl
 
smoothingTime - Variable in class GPS.GPSParameters
GPS smoothing time in seconds.
smoothPlot - Variable in class clickDetector.ClickSpectrumParams
 
smoothSpecData - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierWorker
 
smruDev - Variable in class PamView.PamDialog
 
snr() - Method in class likelihoodDetectionModule.normalizer.NormalizedData
This method returns the signal to noise ratio.
SnrThresholdNode - Class in likelihoodDetectionModule
Represents the band SNR threshold for a signal band.
SnrThresholdNode(double, double[]) - Constructor for class likelihoodDetectionModule.SnrThresholdNode
 
sockaddr - Variable in class ishmaelComms.Client
 
sockaddr - Variable in class ishmaelComms.ProcessIshmaelData.Client
 
socket - Variable in class ipcomms.Consumer
 
socket - Variable in class ipcomms.Producer
 
sodu - Variable in class simulatedAcquisition.SimProcess.SimMouseAdapter
 
somethingShowing - Static variable in class PamView.PamGui
 
sortAngleMeasurement() - Method in class videoRangePanel.VRControl.AngleListener
 
sortAnglreReadout() - Method in class beakedWhaleProtocol.BeakedProcess
 
sortBinaryDataMaps(ArrayList<PamDataBlock>) - Method in class binaryFileStorage.BinaryStore
 
sortCalibrations() - Method in class angleMeasurement.AngleCalibration
calibration values probably came in as an array of true points and an array of measuments.
sortChannelListIndexes() - Method in class Acquisition.AcquisitionParameters
Creates a set of easily accessible channel indexes which can be used to convert from channel numbers to channel index e.g.
sortChannelLists() - Method in class Acquisition.AcquisitionDialog
 
sortChannelLists() - Method in class Spectrogram.SpectrogramParamsDialog
 
sortDialogComponent() - Method in class soundPlayback.PlaybackDialog
 
sortDistanceFromLast() - Method in class GPS.GpsData
 
sortedMeasuredValues - Variable in class angleMeasurement.AngleCalibration
sorted values from angle measuring device.
sortedTrueValues - Variable in class angleMeasurement.AngleCalibration
sorted values measured from compass rose
sortFrameTitles() - Method in class PamView.GuiFrameManager
 
sortItemsByCode() - Method in class generalDatabase.lookupTables.LookupList
Sort the items by the code value in the look up table (case insensitive)
sortItemsById() - Method in class generalDatabase.lookupTables.LookupList
Sort the items by the database id value
sortItemsByOrder() - Method in class generalDatabase.lookupTables.LookupList
Sort the items by the order value in the look up table
sortItemsByText() - Method in class generalDatabase.lookupTables.LookupList
Sort the items by the text value in the look up table (case insensitive)
sortLowHigh() - Method in class noiseMonitor.NoiseSettings
 
sortMapMice() - Method in class simulatedAcquisition.SimProcess
 
sortMapPoints() - Method in class dataMap.OfflineDataMap
Sort all map points into ascending order based on start time.
sortMapPoints() - Method in class PamguardMVC.OfflineDataMap
Sort all map points into ascending order based on start time.
sortOutDataBlocks() - Method in class clickDetector.ClickDetector.ChannelGroupDetector
sort out filtered data blocks.
sortOutDataBlocks() - Method in class clickDetector.ClickDetector
 
sortScales() - Method in class dataMap.DataStreamPanel
 
sortScales() - Method in class Filters.FilterDialog.BodePlot
 
sortScales() - Method in class noiseMonitor.NoiseTabPanel.PlotPanel
 
sortScales() - Method in class videoRangePanel.VRPanel
 
sortScales(int) - Method in class videoRangePanel.VRPanel
 
sortVRDataBlock() - Method in class beakedWhaleProtocol.BeakedControl.VideoRangeMonitor
 
sortWestAxis() - Method in class clickDetector.ClickSpectrum
 
sosError - Variable in class Array.EnvironmentPanel
 
sound - Variable in class simulatedAcquisition.ClickSound
 
sound - Variable in class simulatedAcquisition.LinearChirp
 
soundAmplitude - Variable in class simulatedAcquisition.SimSound
Signal level of the sound 1m from the hydrophone
SOUNDCARD - Static variable in class Acquisition.AcquisitionCParameters
 
soundCardDialogComponent - Class in soundPlayback
 
soundCardDialogComponent(SoundCardSystem) - Constructor for class soundPlayback.soundCardDialogComponent
 
soundCardDialogComponent - Variable in class soundPlayback.SoundCardPlayback
 
SoundCardFilePlayback - Class in soundPlayback
 
SoundCardFilePlayback(FilePlayback) - Constructor for class soundPlayback.SoundCardFilePlayback
 
soundCardNames - Variable in class soundPlayback.SoundCardFilePlayback
 
SoundCardParameters - Class in Acquisition
Used by SoundCardSystem
SoundCardParameters() - Constructor for class Acquisition.SoundCardParameters
 
soundCardParameters - Variable in class Acquisition.SoundCardSystem
 
soundCardParameters - Variable in class asiojni.ASIOSoundSystem
 
soundCardPlayback - Variable in class Acquisition.SoundCardSystem
 
SoundCardPlayback - Class in soundPlayback
 
SoundCardPlayback(SoundCardSystem) - Constructor for class soundPlayback.SoundCardPlayback
 
soundCards - Variable in class soundPlayback.FilePlaybackDialogComponent
 
soundCards - Variable in class soundPlayback.soundCardDialogComponent
 
SoundCardSystem - Class in Acquisition
Everything and everything to do with controlling and reading sound cards.
SoundCardSystem() - Constructor for class Acquisition.SoundCardSystem
 
soundCardSystem - Variable in class soundPlayback.soundCardDialogComponent
 
SoundCardSystem.CaptureThread - Class in Acquisition
 
SoundCardSystem.CaptureThread() - Constructor for class Acquisition.SoundCardSystem.CaptureThread
 
soundData - Variable in class SoundRecorder.RecorderProcess
 
soundFile - Variable in class Acquisition.AcquisitionCParameters
 
soundFile - Variable in class Acquisition.offlineFuncs.WavFileDataMapPoint
 
soundFile - Static variable in class PamUtils.PamCalendar
true if data are from a file based data source, false if the data are arriving in real time.
SoundFileFilter - Class in Acquisition
File filter for selecting some standard sound file types
SoundFileFilter() - Constructor for class Acquisition.SoundFileFilter
 
soundFileTimeInMillis - Static variable in class PamUtils.PamCalendar
time from the start of the file to the currentmoment.
soundPlayback - package soundPlayback
 
SoundRecorder - package SoundRecorder
 
soundTypes - Variable in class simulatedAcquisition.SimObjectDialog
 
source - Variable in class beakedWhaleProtocol.BeakedLogging
 
source - Variable in class Spectrogram.SpectrogramParamsDialog
 
SOURCE_ACOUSTICTRACKING - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_LENGTH - Static variable in class beakedWhaleProtocol.BeakedLogging
 
SOURCE_OTHER - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_OTHERVESSELSIGHTING - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_SHORESIGHTING_OTHER - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_SHORESIGHTING_RETICULE - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_SHORESIGHTING_THEODOLITE - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_SHORESIGHTING_VIDEO - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_UNKNOWN - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_VESSELSIGHTING - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
sourceChanged() - Method in class PamView.SourcePanel
 
sourceChanged() - Method in class soundPlayback.PlaybackDialog
 
sourceChanged() - Method in class soundPlayback.PlaybackSourcePanel
 
sourceData - Variable in class eventCounter.DataCounter
 
sourceData - Variable in class KernelSmoothing.KernelSmoothingProcess
 
sourceData - Variable in class Spectrogram.SpectrogramParamsDialog
 
sourceData - Variable in class spectrogramNoiseReduction.SpectrogramNoiseProcess
 
sourceData - Variable in class whistlesAndMoans.WhistleDelays
 
sourceData - Variable in class whistlesAndMoans.WhistleToneConnectProcess
This will be the source data for the noise reduction and threshold process.
sourceData - Variable in class whitesWhistleDetector.WhitesConnectProcess
 
sourceDataBlock - Variable in class clickDetector.ClickSpectrogramPlugin.BTDisplayPanel
 
sourceDataBlock - Variable in class Localiser.DetectionGrouper
 
sourceDataBlock - Variable in class noiseMonitor.UserBandDialog
 
sourceDataLine - Variable in class soundPlayback.SoundCardFilePlayback
 
sourceDataLine - Variable in class soundPlayback.SoundCardPlayback
 
sourceDataType - Variable in class whistleClassifier.training.TrainingDataSet
 
sourceDataType - Variable in class whistleClassifier.TrainingDataSet
 
sourceFFTDataBlock - Variable in class Spectrogram.SpectrogramDisplay
 
sourceList - Variable in class Acquisition.RawSourceDialogPanel
 
sourceList - Variable in class beakedWhaleProtocol.BeakedLocationDialog
 
sourceList - Variable in class decimator.DecimatorParamsDialog
 
sourceList - Variable in class EdgeDetector.EdgeParamsDialog
 
sourceList - Variable in class PamView.SourcePanel
 
sourceList - Variable in class Spectrogram.SpectrogramParamsDialog
 
sourceName - Variable in class likelihoodDetectionModule.AcquisitionSettings
The name of the acquisition source module.
sourceName - Variable in class Spectrogram.SpectrogramParameters
 
sourceNumber - Variable in class likelihoodDetectionModule.AcquisitionSettings
The number assigned to the source module by the pamguard controller.
sourceNumber - Variable in class likelihoodDetectionModule.LikelihoodFFTParameters
The source number of the audio data source to be used (i.e., the acquisition module).
sourcePanel - Variable in class AIS.AISSettingsDialog
 
sourcePanel - Variable in class amplifier.AmpDialog
 
sourcePanel - Variable in class clickDetector.dialogs.ClickParamsDialog
 
sourcePanel - Variable in class fftManager.FFTParametersDialog
 
sourcePanel - Variable in class Filters.FilterDataSourceDialog
 
sourcePanel - Variable in class GPS.GPSParametersDialog
 
sourcePanel - Variable in class IshmaelDetector.IshDetParamsDialog
 
sourcePanel - Variable in class IshmaelLocator.IshLocParamsDialog
 
sourcePanel - Variable in class KernelSmoothing.KernelSmoothingDialog
 
sourcePanel - Variable in class likelihoodDetectionModule.LikelihoodDetectionParametersDialog
The PamView construct that allows for the selection of an acquisition source and channels.
sourcePanel - Variable in class loc3d_Thode.TowedArray3DParametersDialog
 
sourcePanel - Variable in class noiseMonitor.NoiseDialog
 
SourcePanel - Class in PamView
Standard panel for dialogs that shows a list of available data sources and, optionally a list of data channels.
SourcePanel(Window, String, Class, boolean, boolean) - Constructor for class PamView.SourcePanel
Construct a panel with a titles border
SourcePanel(Window, Class, boolean, boolean) - Constructor for class PamView.SourcePanel
Construct a panel without a border
sourcePanel - Variable in class patchPanel.PatchPanelDialog
 
sourcePanel - Variable in class rocca.RoccaParametersDialog
 
sourcePanel - Variable in class seismicVeto.VetoParametersDialog
 
sourcePanel - Variable in class soundPlayback.PlaybackDialog
 
sourcePanel - Variable in class SoundRecorder.RecorderSettingsDialog
 
sourcePanel - Variable in class Spectrogram.SpectrogramParamsDialog
 
sourcePanel - Variable in class spectrogramNoiseReduction.SpectrogramNoiseDialog
 
sourcePanel - Variable in class spectrogramNoiseReduction.SpectrogramNoiseDialogPanel
 
sourcePanel - Variable in class terrella.TerrellaParametersDialog
 
sourcePanel - Variable in class whistleClassifier.WhistleClassificationDialog
 
sourcePanel - Variable in class whistlesAndMoans.WhistleToneDialog
 
sourcePanel - Variable in class whitesWhistleDetector.WhitesDialog
 
sourcePanel - Variable in class WorkshopDemo.WorkshopParametersDialog
 
SourcePanel.SelectionListener - Class in PamView
 
SourcePanel.SelectionListener(int) - Constructor for class PamView.SourcePanel.SelectionListener
 
SourcePanelMonitor - Interface in PamView
Interface for objects requiring notifications when channel selections in a GroupedSourcePanel change
sourceRawDataBlock - Variable in class Spectrogram.SpectrogramDisplay
 
sourceSampleRate - Variable in class decimator.DecimatorParamsDialog
 
sourceSampleRate - Variable in class decimator.DecimatorProcess
 
sourceSelectionChanged() - Method in class noiseMonitor.NoiseDialog
 
sourceType - Variable in class NMEA.NMEAParameters
 
sourceType - Variable in class PamView.SourcePanel
 
southAxis - Variable in class angleMeasurement.AngleCalibrationDialog.MeasuredCorrection
 
southAxis - Variable in class angleMeasurement.AngleCalibrationDialog.TrueToMeasured
 
southAxis - Variable in class clickDetector.WignerPlot
 
southAxis - Variable in class fftManager.FFTPluginPanelProvider.FFTPluginPanel
 
southAxis - Variable in class Layout.PamAxisPanel
axis to be displayed on any or all of the four sides of a plot window (innerPanel below)
southAxis - Variable in class pamMaths.HistogramDisplay
 
southAxis - Variable in class whistleClassifier.ClassifierHistoryWindow
 
southPanel - Variable in class clickDetector.dialogs.ClickDisplayDialog.SpeciesPanel
 
southPanel - Variable in class Layout.PamFramePlots
 
spacedArray - Variable in class whistlesAndMoans.WhistleToneConnectProcess.ShapeConnector
 
spacedArray - Variable in class whitesWhistleDetector.WhitesConnectProcess.ShapeConnector
 
spacing - Variable in class Localiser.PairBearingLocaliser
 
spacingError - Variable in class Localiser.PairBearingLocaliser
 
spareBits - Variable in class generalDatabase.LogSettings.SettingsDataUnit
 
spareBits - Variable in class generalDatabase.PamSettingsTableDefinition
 
spareBits - Variable in class PamUtils.Ascii6Bit
 
spareInt1 - Variable in class Acquisition.AcquisitionCParameters
 
spareInt2 - Variable in class Acquisition.AcquisitionCParameters
 
spareString1 - Variable in class Acquisition.AcquisitionCParameters
 
spareString2 - Variable in class Acquisition.AcquisitionCParameters
 
spd - Variable in class simulatedAcquisition.SimObjectDialog
 
specAxisPanel - Variable in class noiseMonitor.NoiseTabPanel
 
specData - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierWorker
 
specFill - Variable in class seismicVeto.VetoParametersDialog
 
specHeight - Variable in class Spectrogram.SpectrogramProjector
 
specialDrawing - Variable in class dataMap.OfflineDataMap
 
specialDrawing - Variable in class PamguardMVC.OfflineDataMap
 
species - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.DefaultSetting
 
species - Variable in class clickDetector.dialogs.ClickDisplayDialog.SpeciesPanel
 
species - Variable in class listening.ThingHeardLogging
 
species - Variable in class rocca.RoccaSidePanel
 
species - Variable in class whistleClassifier.training.TrainingDataGroup
 
species - Variable in class whistleClassifier.training.TrainingDataSet
 
species - Variable in class whistleClassifier.TrainingDataGroup
 
species - Variable in class whistleClassifier.TrainingDataSet
 
species - Variable in class whistleClassifier.WhistleClassificationDataUnit
 
species - Variable in class whistleClassifier.WhistleClassificationDialog.TrainingPanel
 
SPECIES_LENGTH - Static variable in class listening.ListeningControl
 
speciesBox - Variable in class whistleClassifier.WhistleClassificationDialog.SpeciesPanel
 
speciesClassCount - Variable in class rocca.RoccaSidePanel
 
speciesClassCountTxt - Variable in class rocca.RoccaSidePanel
 
speciesCode - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
speciesIndex - Variable in class listening.ThingHeard
 
speciesIndex - Variable in class listening.ThingHeardTabPanelControl.ButtonListener
 
SpeciesItem - Class in listening
Data for a species to include in things heard data
SpeciesItem(String) - Constructor for class listening.SpeciesItem
 
speciesItem - Variable in class listening.ThingHeard
 
speciesList - Variable in class clickDetector.ClickBinaryModuleFooter
 
speciesList - Variable in class clickDetector.dialogs.ClickDisplayDialog.SpeciesPanel
 
speciesList - Variable in class clickDetector.offlineFuncs.OfflineEventDialog
 
speciesList - Variable in class listening.ListeningParameters
 
speciesList - Variable in class whistleClassifier.FragmentClassifierParams
 
speciesListChanged(String[]) - Method in class whistleClassifier.WhistleClassifierLogging
 
speciesLogLikelihoods - Variable in class whistleClassifier.WhistleClassificationDataUnit
 
speciesName - Variable in class whistleClassifier.WhistleClassifierLogging
 
speciesNames - Variable in class whistleClassifier.WhistleClassifierLogging
 
speciesPanel - Variable in class clickDetector.dialogs.ClickDisplayDialog
 
speciesPanel - Variable in class whistleClassifier.WhistleClassificationDialog.RunningPanel
 
speciesProbabilities - Variable in class whistleClassifier.WhistleClassificationDataUnit
 
speciesProbabilities - Variable in class whistleClassifier.WhistleClassifierLogging
 
speciesSymbols - Variable in class whistleClassifier.ClassifierHistoryWindow
 
specificGasConstant - Static variable in class videoRangePanel.RefractionMethod
 
specImage - Variable in class Spectrogram.SpectrogramDisplay.SpectrogramPanel
 
specLevelAxis - Variable in class noiseMonitor.NoiseTabPanel
 
SpecNoiseDialogComponent - Interface in spectrogramNoiseReduction
 
SpecNoiseMethod - Class in spectrogramNoiseReduction
Interface for multiple plugins to the spectrogram noise reduction system.
SpecNoiseMethod() - Constructor for class spectrogramNoiseReduction.SpecNoiseMethod
 
specNoiseSettings - Variable in class whistlesAndMoans.WhistleToneParameters
 
specPanelMouse - Variable in class Spectrogram.SpectrogramDisplay.SpectrogramPanel
 
specPlotAxesPanel - Variable in class noiseMonitor.NoiseTabPanel.SpecPlotPanel
 
specPlotPanel - Variable in class noiseMonitor.NoiseTabPanel
 
specSymbol - Variable in class clickDetector.NewClickOverlayGraphics
 
specSymbolSize - Static variable in class clickDetector.NewClickOverlayGraphics
 
spectraArrayList - Variable in class fftManager.FFTPluginPanelProvider.FFTPluginPanel
 
spectraData - Variable in class likelihoodDetectionModule.linearAverageSpectra.AveragedSpectraDataUnit
 
spectraData - Variable in class likelihoodDetectionModule.spectralEti.SpectralEtiDataUnit
 
spectraDataBlock - Variable in class likelihoodDetectionModule.linearAverageSpectra.LinearAverageSpectraProcess
 
spectraDataBlock - Variable in class likelihoodDetectionModule.spectralEti.SpectralEtiProcess
 
SpectralBand - Class in likelihoodDetectionModule.spectralEti
A class which sums energy across a spectrum from a start frequency to an end frequency
SpectralBand(double, double, double) - Constructor for class likelihoodDetectionModule.spectralEti.SpectralBand
 
spectralEtiDataBlock - Variable in class likelihoodDetectionModule.normalizer.NormalizerProcess
 
SpectralEtiDataUnit - Class in likelihoodDetectionModule.spectralEti
The data type for the output of the spectralEti module.
SpectralEtiDataUnit(long, int, long, long) - Constructor for class likelihoodDetectionModule.spectralEti.SpectralEtiDataUnit
 
spectralEtiProcess - Variable in class likelihoodDetectionModule.LikelihoodDetectionUnit.ProcessGroup
The spectral eti process.
SpectralEtiProcess - Class in likelihoodDetectionModule.spectralEti
The PamProcess which implements the spectralEti signal processing.
SpectralEtiProcess(LikelihoodDetectionUnit, PamDataBlock, ArrayList<SignalBand>, ArrayList<GuardBand>) - Constructor for class likelihoodDetectionModule.spectralEti.SpectralEtiProcess
 
Spectrogram - package Spectrogram
 
spectrogramAxis - Variable in class Spectrogram.SpectrogramDisplay
 
spectrogramDependency - Variable in class userDisplay.UserDisplayControl
 
spectrogramDisplay - Variable in class Spectrogram.DirectDrawProjector
 
SpectrogramDisplay - Class in Spectrogram
 
SpectrogramDisplay(UserDisplayControl, SpectrogramParameters) - Constructor for class Spectrogram.SpectrogramDisplay
 
spectrogramDisplay - Variable in class Spectrogram.SpectrogramDisplay
 
spectrogramDisplay - Variable in class Spectrogram.SpectrogramProjector
 
SpectrogramDisplay.AmplitudePanel - Class in Spectrogram
 
SpectrogramDisplay.AmplitudePanel() - Constructor for class Spectrogram.SpectrogramDisplay.AmplitudePanel
 
SpectrogramDisplay.AmplitudePanel.AmplitudeBar - Class in Spectrogram
 
SpectrogramDisplay.AmplitudePanel.AmplitudeBar() - Constructor for class Spectrogram.SpectrogramDisplay.AmplitudePanel.AmplitudeBar
 
SpectrogramDisplay.MenuPlayAll - Class in Spectrogram
 
SpectrogramDisplay.MenuPlayAll() - Constructor for class Spectrogram.SpectrogramDisplay.MenuPlayAll
 
SpectrogramDisplay.PlayProgress - Class in Spectrogram
 
SpectrogramDisplay.PlayProgress() - Constructor for class Spectrogram.SpectrogramDisplay.PlayProgress
 
SpectrogramDisplay.SettingsAction - Class in Spectrogram
 
SpectrogramDisplay.SettingsAction() - Constructor for class Spectrogram.SpectrogramDisplay.SettingsAction
 
SpectrogramDisplay.SpecPanelMouse - Class in Spectrogram
 
SpectrogramDisplay.SpecPanelMouse(SpectrogramDisplay.SpectrogramPanel) - Constructor for class Spectrogram.SpectrogramDisplay.SpecPanelMouse
 
SpectrogramDisplay.SpectrogramAxis - Class in Spectrogram
Need to extend PamAxisPanel in order to override the axis drawing to allow for the plug in panels at the bottom of the display.
SpectrogramDisplay.SpectrogramAxis() - Constructor for class Spectrogram.SpectrogramDisplay.SpectrogramAxis
 
SpectrogramDisplay.SpectrogramOuterPanel - Class in Spectrogram
 
SpectrogramDisplay.SpectrogramOuterPanel() - Constructor for class Spectrogram.SpectrogramDisplay.SpectrogramOuterPanel
 
SpectrogramDisplay.SpectrogramPanel - Class in Spectrogram
Inner panels showing a single spectrogram display.
SpectrogramDisplay.SpectrogramPanel(int) - Constructor for class Spectrogram.SpectrogramDisplay.SpectrogramPanel
 
SpectrogramDisplay.SpectrogramPanel.DisplaySelection - Class in Spectrogram
 
SpectrogramDisplay.SpectrogramPanel.DisplaySelection(SpectrogramDisplay.SpectrogramPanel) - Constructor for class Spectrogram.SpectrogramDisplay.SpectrogramPanel.DisplaySelection
 
SpectrogramDisplay.SpectrogramPanel.PopupListener - Class in Spectrogram
 
SpectrogramDisplay.SpectrogramPanel.PopupListener() - Constructor for class Spectrogram.SpectrogramDisplay.SpectrogramPanel.PopupListener
 
SpectrogramDisplay.SpectrogramPlotPanel - Class in Spectrogram
Outer panel which contains the spectrogram outer panel and also all the plug in plots a the bottom
SpectrogramDisplay.SpectrogramPlotPanel() - Constructor for class Spectrogram.SpectrogramDisplay.SpectrogramPlotPanel
 
SpectrogramDisplay.SplitPaneListener - Class in Spectrogram
 
SpectrogramDisplay.SplitPaneListener() - Constructor for class Spectrogram.SpectrogramDisplay.SplitPaneListener
 
SpectrogramDisplay.ViewScrollObserver - Class in Spectrogram
 
SpectrogramDisplay.ViewScrollObserver() - Constructor for class Spectrogram.SpectrogramDisplay.ViewScrollObserver
 
SpectrogramMarkObserver - Interface in Spectrogram
 
SpectrogramMarkObservers - Class in Spectrogram
Class for registration of classes that will observer spectrgram displays.
SpectrogramMarkObservers() - Constructor for class Spectrogram.SpectrogramMarkObservers
 
SpectrogramMarkProcess - Class in Spectrogram
Standard process for any PamControlled unit observing marks made manually on spectrogram displays.
SpectrogramMarkProcess(PamControlledUnit) - Constructor for class Spectrogram.SpectrogramMarkProcess
 
spectrogramMedianFilter - Variable in class spectrogramNoiseReduction.medianFilter.MedianFilterDialogBits
 
SpectrogramMedianFilter - Class in spectrogramNoiseReduction.medianFilter
 
SpectrogramMedianFilter() - Constructor for class spectrogramNoiseReduction.medianFilter.SpectrogramMedianFilter
 
SpectrogramMedianFilter - Class in whistlesAndMoans
 
SpectrogramMedianFilter(PamControlledUnit, PamDataBlock) - Constructor for class whistlesAndMoans.SpectrogramMedianFilter
 
SpectrogramMedianFilter - Class in whitesWhistleDetector
 
SpectrogramMedianFilter(PamControlledUnit, PamDataBlock) - Constructor for class whitesWhistleDetector.SpectrogramMedianFilter
 
SpectrogramNoiseControl - Class in spectrogramNoiseReduction
 
SpectrogramNoiseControl(String) - Constructor for class spectrogramNoiseReduction.SpectrogramNoiseControl
 
SpectrogramNoiseControl.DetectionSettings - Class in spectrogramNoiseReduction
 
SpectrogramNoiseControl.DetectionSettings(Frame) - Constructor for class spectrogramNoiseReduction.SpectrogramNoiseControl.DetectionSettings
 
SpectrogramNoiseDialog - Class in spectrogramNoiseReduction
 
SpectrogramNoiseDialog(Window, SpectrogramNoiseProcess) - Constructor for class spectrogramNoiseReduction.SpectrogramNoiseDialog
 
spectrogramNoiseDialogPanel - Variable in class fftManager.FFTParametersDialog
 
spectrogramNoiseDialogPanel - Variable in class spectrogramNoiseReduction.SpectrogramNoiseDialog
 
SpectrogramNoiseDialogPanel - Class in spectrogramNoiseReduction
 
SpectrogramNoiseDialogPanel(SpectrogramNoiseProcess) - Constructor for class spectrogramNoiseReduction.SpectrogramNoiseDialogPanel
 
spectrogramNoiseDialogPanel - Variable in class whistlesAndMoans.WhistleToneDialog
 
SpectrogramNoiseDialogPanel.CheckEnable - Class in spectrogramNoiseReduction
 
SpectrogramNoiseDialogPanel.CheckEnable() - Constructor for class spectrogramNoiseReduction.SpectrogramNoiseDialogPanel.CheckEnable
 
SpectrogramNoiseDialogPanel.SourceListener - Class in spectrogramNoiseReduction
 
SpectrogramNoiseDialogPanel.SourceListener() - Constructor for class spectrogramNoiseReduction.SpectrogramNoiseDialogPanel.SourceListener
 
spectrogramNoiseProcess - Variable in class fftManager.PamFFTControl
 
spectrogramNoiseProcess - Variable in class spectrogramNoiseReduction.SpectrogramNoiseControl
 
spectrogramNoiseProcess - Variable in class spectrogramNoiseReduction.SpectrogramNoiseDialog
 
spectrogramNoiseProcess - Variable in class spectrogramNoiseReduction.SpectrogramNoiseDialogPanel
 
SpectrogramNoiseProcess - Class in spectrogramNoiseReduction
 
SpectrogramNoiseProcess(PamControlledUnit) - Constructor for class spectrogramNoiseReduction.SpectrogramNoiseProcess
 
spectrogramNoiseProcess - Variable in class whistlesAndMoans.WhistleMoanControl
 
spectrogramNoiseReduction - package spectrogramNoiseReduction
 
spectrogramNoiseReduction.averageSubtraction - package spectrogramNoiseReduction.averageSubtraction
 
spectrogramNoiseReduction.kernelSmoothing - package spectrogramNoiseReduction.kernelSmoothing
 
spectrogramNoiseReduction.medianFilter - package spectrogramNoiseReduction.medianFilter
 
spectrogramNoiseReduction.threshold - package spectrogramNoiseReduction.threshold
 
spectrogramNoiseSettings - Variable in class fftManager.FFTParameters
 
spectrogramNoiseSettings - Variable in class spectrogramNoiseReduction.SpectrogramNoiseDialog
 
SpectrogramNoiseSettings - Class in spectrogramNoiseReduction
 
SpectrogramNoiseSettings() - Constructor for class spectrogramNoiseReduction.SpectrogramNoiseSettings
 
spectrogramNotification(SpectrogramDisplay, int, int, long, long, double, double) - Method in class clipgenerator.ClipProcess
 
spectrogramNotification(SpectrogramDisplay, int, int, long, long, double, double) - Method in class IshmaelLocator.IshLocProcess
Data for localization can arrive from either an upstream data source or from the user drawing a box on the spectrogram.
spectrogramNotification(SpectrogramDisplay, int, int, long, long, double, double) - Method in class rocca.RoccaWhistleSelect
 
spectrogramNotification(SpectrogramDisplay, int, int, long, long, double, double) - Method in interface Spectrogram.SpectrogramMarkObserver
 
spectrogramNotification(SpectrogramDisplay, int, int, long, long, double, double) - Method in class Spectrogram.SpectrogramMarkProcess
Override this to process data from the marked spectrogram.
spectrogramOuterPanel - Variable in class Spectrogram.SpectrogramDisplay
 
spectrogramPanel - Variable in class Spectrogram.SpectrogramDisplay.SpecPanelMouse
 
spectrogramPanel - Variable in class Spectrogram.SpectrogramDisplay.SpectrogramPanel.DisplaySelection
 
spectrogramPanels - Variable in class Spectrogram.SpectrogramDisplay
 
spectrogramParameters - Variable in class Spectrogram.SpectrogramDisplay
 
SpectrogramParameters - Class in Spectrogram
These are the parameter settings for a single spectrogram window, note tha a single spectrogram tab may have multiple windows
SpectrogramParameters() - Constructor for class Spectrogram.SpectrogramParameters
 
spectrogramParameters - Static variable in class Spectrogram.SpectrogramParamsDialog
 
spectrogramParameters - Variable in class userDisplay.UserDisplayParameters
 
SpectrogramParamsDialog - Class in Spectrogram
 
SpectrogramParamsDialog(Window, SpectrogramParameters) - Constructor for class Spectrogram.SpectrogramParamsDialog
 
SpectrogramParamsDialog.AmplitudePanel - Class in Spectrogram
 
SpectrogramParamsDialog.AmplitudePanel() - Constructor for class Spectrogram.SpectrogramParamsDialog.AmplitudePanel
 
SpectrogramParamsDialog.FrequencyPanel - Class in Spectrogram
 
SpectrogramParamsDialog.FrequencyPanel() - Constructor for class Spectrogram.SpectrogramParamsDialog.FrequencyPanel
 
SpectrogramParamsDialog.ObserverPanel - Class in Spectrogram
 
SpectrogramParamsDialog.ObserverPanel() - Constructor for class Spectrogram.SpectrogramParamsDialog.ObserverPanel
 
SpectrogramParamsDialog.PluginPanel - Class in Spectrogram
 
SpectrogramParamsDialog.PluginPanel() - Constructor for class Spectrogram.SpectrogramParamsDialog.PluginPanel
 
SpectrogramParamsDialog.SourcePanel - Class in Spectrogram
 
SpectrogramParamsDialog.SourcePanel() - Constructor for class Spectrogram.SpectrogramParamsDialog.SourcePanel
 
SpectrogramParamsDialog.TimePanel - Class in Spectrogram
 
SpectrogramParamsDialog.TimePanel() - Constructor for class Spectrogram.SpectrogramParamsDialog.TimePanel
 
spectrogramPlotPanel - Variable in class Spectrogram.SpectrogramDisplay
 
spectrogramProjector - Variable in class Spectrogram.SpectrogramDisplay
 
SpectrogramProjector - Class in Spectrogram
Spectrogram projector for overlaying data onto the spectrogram bitmap which will always be scaled 1:1 with regard to pixels per frequency or time bin.
SpectrogramProjector(SpectrogramDisplay) - Constructor for class Spectrogram.SpectrogramProjector
 
spectrogramTabMenu - Variable in class userDisplay.UserDisplayControl
 
SpectrogramThreshold - Class in spectrogramNoiseReduction.threshold
 
SpectrogramThreshold() - Constructor for class spectrogramNoiseReduction.threshold.SpectrogramThreshold
 
spectrogramThreshold - Variable in class spectrogramNoiseReduction.threshold.ThresholdDialogComponent
 
spectrumAverage - Variable in class whistleDetector.PeakDetector
 
spectrumAxisPanel - Variable in class clickDetector.ClickSpectrum
 
spectrumInfo - Variable in class clickDetector.ClickSpectrum
 
spectrumList - Variable in class fftManager.FFTPluginPanelProvider.FFTPluginPanel.AverageChannelSpectrum
 
spectrumPlotPanl - Variable in class clickDetector.ClickSpectrum
 
specWidth - Variable in class Spectrogram.SpectrogramProjector
 
specZeros - Variable in class seismicVeto.VetoParametersDialog
 
speed - Variable in class GPS.FormatGpsData
 
speed - Variable in class GPS.GpsData
 
speed - Variable in class GPS.GpsLogger
 
speed - Variable in class ishmaelComms.Client
 
speed - Variable in class ishmaelComms.IshmaelData
 
speed - Variable in class Map.GpsTextDisplay
 
speed - Variable in class NMEA.NMEASimDialog
 
speed - Variable in class simulatedAcquisition.SimObject
 
speedInterval - Variable in class GPS.GPSParameters
Minimum speed change for a dynamic read
speedInterval - Variable in class GPS.GPSParametersDialog.ReadOptions
 
speedOfSound - Variable in class Array.EnvironmentPanel
 
speedOfSound - Variable in class Array.PamArray
 
speedOfSound - Variable in class Localiser.MLGridBearingLocaliser
 
speedOfSound - Variable in class Localiser.PairBearingLocaliser
 
speedOfSoundError - Variable in class Array.PamArray
 
speedOfSoundError - Variable in class Localiser.MLGridBearingLocaliser
 
speedOfSoundError - Variable in class Localiser.PairBearingLocaliser
 
speedOverGround - Variable in class AIS.AISLogger
 
speedOverGround - Variable in class AIS.AISPositionReport
 
speedType - Variable in class GPS.GpsLogger
 
SphericalPropagation - Class in propagation
 
SphericalPropagation() - Constructor for class propagation.SphericalPropagation
 
spinBrightness - Variable in class videoRangePanel.VRSidePanel.VRPanel
 
spinContrast - Variable in class videoRangePanel.VRSidePanel.VRPanel
 
spinnerModel - Variable in class pamScrollSystem.RangeSpinner
 
spinnerValue - Variable in class pamScrollSystem.RangeSpinner
 
Splash - Class in PamUtils
Splash screen
Splash(int, int) - Constructor for class PamUtils.Splash
 
spList - Variable in class rocca.RoccaClassifier
 
splitDividerLocation - Variable in class Spectrogram.SpectrogramParameters
 
splitPane - Variable in class PamView.PamHelp
Holds main content pane on right and tabbed pane (help_pane) on left.
splitPane - Variable in class Spectrogram.SpectrogramDisplay.SpectrogramPlotPanel
 
SplitWindowNorm - Class in likelihoodDetectionModule.normalizer
A Split Window normalizer implementation.
SplitWindowNorm(List<SplitWindowNormWidths>) - Constructor for class likelihoodDetectionModule.normalizer.SplitWindowNorm
 
SplitWindowNorm.BlockAveragerPair - Class in likelihoodDetectionModule.normalizer
Convenience class which groups a narrow and wide blockAverager together for easier storage
SplitWindowNorm.BlockAveragerPair(int, int) - Constructor for class likelihoodDetectionModule.normalizer.SplitWindowNorm.BlockAveragerPair
 
SplitWindowNormWidths - Class in likelihoodDetectionModule.normalizer
This class is used to convert signal and background estimator times in seconds into window widths in samples suitable for use with the SplitWindowNorm class.
SplitWindowNormWidths(int, int) - Constructor for class likelihoodDetectionModule.normalizer.SplitWindowNormWidths
Simple constructor.
SplitWindowNormWidths(double, double, double) - Constructor for class likelihoodDetectionModule.normalizer.SplitWindowNormWidths
Converts the signalTimeConstant and backgroundTimeConstant to windows widths in samples given the timeResolution.
spMonitors - Variable in class PamView.SourcePanel
 
spread - Variable in class IshmaelDetector.SgramCorrParams
 
SQLLogging - Class in generalDatabase
SQLLogging performs basic SQL actions to write and read data from a database.
SQLLogging(PamDataBlock) - Constructor for class generalDatabase.SQLLogging
SQLLogging constructor.
sqlType - Variable in class generalDatabase.PamTableItem
the SQL type (as defined in java.sql.Types) for the database column
sqlTypes - Variable in class generalDatabase.MSAccessSystem
 
sqlTypes - Variable in class generalDatabase.MySQLSystem
 
SQLTypes - Class in generalDatabase
Utilities for converting between java.sql.types numeric and text formats.
SQLTypes() - Constructor for class generalDatabase.SQLTypes
 
SQR(double) - Method in class Stats.LinFit
 
sqrt() - Method in class fftManager.Complex
Gets the square root of a Complex number
sqrt2 - Variable in class Acquisition.AcquisitionProcess
 
squareFit(double[], double[]) - Static method in class pamMaths.Regressions
Fit a second order polynomial to a set of points
squareXpos - Variable in class Spectrogram.ScalePanel
 
sqx - Static variable in class PamView.PamSymbol
 
sqy - Static variable in class PamView.PamSymbol
 
srCol - Variable in class SoundRecorder.RecorderLogger
 
ss - Variable in class Stats.LinFit
 
st2 - Variable in class Stats.LinFit
 
STANDARD_BEAKED_WHALE - Static variable in class clickDetector.ClickTypeParams
 
STANDARD_PORPOISE - Static variable in class clickDetector.ClickTypeParams
 
standardChannelListPanel - Variable in class Acquisition.AcquisitionDialog
 
StandardChannelListPanel - Class in Acquisition
 
StandardChannelListPanel() - Constructor for class Acquisition.StandardChannelListPanel
 
StandardFileDate - Class in Acquisition
Implementation of FileDate to read the standard file date format that I use in Logger.
StandardFileDate() - Constructor for class Acquisition.StandardFileDate
 
standardHGap - Variable in class PamView.PamFlowLayout
 
standardLoadTimes - Variable in class pamScrollSystem.LoadOptionsDialog
 
standardOfflineSave(DBControlUnit, Connection) - Method in class generalDatabase.SQLLogging
 
standardPaint(Graphics) - Method in class dataMap.DataStreamPanel.DataGraph
Paint effort and detections for all data maps.
start() - Method in class angleMeasurement.FluxgateWorldAngles
 
start - Variable in class ishmaelComms.Client
 
start - Variable in class ishmaelComms.IshmaelData
 
start() - Method in class nmeaEmulator.NMEAOutdialog
 
start - Variable in class whistleClassifier.training.ClassifierTrainingDialog.RunTrainingPanel
 
START - Static variable in interface whistleClassifier.training.TrainingObserver
 
START_TABLE - Static variable in class generalDatabase.CreateMapInfo
 
startAngle - Variable in class angleVetoes.AngleVeto
 
startAngle - Variable in class angleVetoes.AngleVetoDialog
 
startBin - Variable in class likelihoodDetectionModule.spectralEti.SpectralBand
 
startBootstrap(FragmentClassifierParams, boolean) - Method in class whistleClassifier.training.ClassifierTrainer
 
startButton - Variable in class beakedWhaleProtocol.BeakedSidePanel
 
startButton - Variable in class nmeaEmulator.NMEAOutdialog
 
startButton - Variable in class performanceTests.PerformanceDialog
 
startCol - Variable in class SoundRecorder.RecorderLogger
 
startCPUSnapShot - Variable in class PamguardMVC.PamProcess
 
startDAQ() - Method in class nidaqdev.Nidaq
 
startDataAt(PamDataBlock, long) - Method in class dataMap.DataMapControl
Start the data in all data streams at the given time
startDataAt(PamDataBlock, long) - Method in class pamScrollSystem.AbstractScrollManager
Start all data in all data blocks at the given time
startDataAt(PamDataBlock, long) - Method in class pamScrollSystem.RealTimeScrollManager
 
startDataAt(PamDataBlock, long) - Method in class pamScrollSystem.ViewerScrollerManager
 
startDetection(DetectionKey, long) - Method in class likelihoodDetectionModule.thresholdDetector.DetectionFilter
Attempts to start a detection.
startDetection(DetectionKey) - Method in interface likelihoodDetectionModule.thresholdDetector.FilteredConsumer
This method is called when a new detection starts on the given channel and band
startDetection(DetectionKey) - Method in class likelihoodDetectionModule.thresholdDetector.FilteredDetectionWriter
 
startDetection(DetectionKey) - Method in class likelihoodDetectionModule.thresholdDetector.TestConsumer
 
startDetection(FFTDataUnit, double) - Method in class seismicVeto.VetoProcess.ChannelDetector
 
startDetection(FFTDataUnit, double) - Method in class WorkshopDemo.WorkshopProcess.ChannelDetector
 
started - Variable in class simulatedAcquisition.SimSound
 
startEvent(long, int) - Method in class eventCounter.DataCounter
 
startEvent(long, PamDataUnit) - Method in interface eventCounter.EventCounterMonitor
 
startExperiment() - Method in class beakedWhaleProtocol.BeakedControl
Set up an experiment by taking the current position, then navigating to slightly outside the edge of the circle and then cutting some shord across it at a sondomised distance from the last position.
startFreq - Variable in class clickDetector.ClickClassifiers.basicSweep.ZeroCrossingStats
Zero crossing start frequency from fit.
startFreq - Variable in class noiseMonitor.UserBandDialog
 
startFreq - Variable in class rocca.RoccaWhistleSelect
 
startFrequencyHz - Variable in class likelihoodDetectionModule.GuardBand
The start frequency hz.
startFrequencyHz - Variable in class likelihoodDetectionModule.SignalBand
The start frequency hz.
StartFrequencyNode - Class in likelihoodDetectionModule
Represents the start frequency for a band.
StartFrequencyNode(double, double) - Constructor for class likelihoodDetectionModule.StartFrequencyNode
 
startLabel - Variable in class pamScrollSystem.PamScroller
 
startLat - Variable in class beakedWhaleProtocol.BeakedExperimentLogging
 
startLater() - Method in class PamController.PamController
calls pamStart using the SingUtilities invokeLater command to start PAMGAURD later in the AWT event que.
startLogging() - Method in class Logging.LogDataObserver
 
startLong - Variable in class beakedWhaleProtocol.BeakedExperimentLogging
 
startMenuEnabler - Variable in class PamView.PamGui
 
startMillis - Variable in class dataMap.SettingsStrip
 
startMillis - Variable in class PamguardMVC.PamDataBlock.OrderData
 
startModel() - Method in class PamModel.PamModel
 
startModel() - Method in interface PamModel.PamModelInterface
Starts the Pam detection process
startNewFiles() - Method in class binaryFileStorage.BinaryStoreProcess
 
startNextTask() - Method in class PamController.AWTScheduler
Start the next task in the list.
startNmeaSource(NMEAParameters.NmeaSources) - Method in class NMEA.AcquireNmeaData
 
startNode - Variable in class likelihoodDetectionModule.EndFrequencyNode
 
startPlayback - Variable in class soundPlayback.SoundCardFilePlayback
 
startPoint - Variable in class PamView.zoomer.ZoomPolygon
 
startPosition - Variable in class simulatedAcquisition.SimObject
 
startProcessing() - Method in class backendCInterfase.BackendManager
Tell the C side to start acquiring and processing data.
startRecording(boolean) - Method in class SoundRecorder.RecorderProcess
 
startSample - Variable in class clickDetector.OldClickClass
 
startSample - Variable in class generalDatabase.PamDetectionLogging
 
startSample - Variable in class likelihoodDetectionModule.linearAverageSpectra.RealBlockAverage
 
startSample - Variable in class likelihoodDetectionModule.normalizer.BlockTimeStamp
 
startSample - Variable in class likelihoodDetectionModule.thresholdDetector.DetectionTracker
 
startSample() - Method in class likelihoodDetectionModule.thresholdDetector.DetectionTracker
 
startSample - Variable in class PamDetection.AcousticDataUnit
all acoustic data must somehow have a knowledge of sample rate.
startSample - Variable in class simulatedAcquisition.SimSound
first sample - at the animal.
startSample - Variable in class SoundRecorder.RecordingInfo
 
startSample - Variable in class whistleDetector.WhistlePeak
 
startSample - Variable in class whistlesAndMoans.SliceData
 
startSampleCol - Variable in class SoundRecorder.RecorderLogger
 
startScreenSizeProcess() - Static method in class PamView.ScreenSize
Only needs to be called once to start the background process which gets the virtual screen size.
startSeconds - Variable in class generalDatabase.PamDetectionLogging
 
startSelected - Variable in class rocca.RoccaWhistleSelect
 
startSim(NMEAOutdialog) - Method in class nmeaEmulator.NMEAFrontEnd
 
startSystem(AcquisitionControl) - Method in class Acquisition.DaqSystem
Start the DaqSystem.
startSystem(AcquisitionControl) - Method in class Acquisition.FileInputSystem
 
startSystem(AcquisitionControl) - Method in class Acquisition.FolderInputSystem
 
startSystem(AcquisitionControl) - Method in class Acquisition.SoundCardSystem
 
startSystem(AcquisitionControl) - Method in class asiojni.ASIOSoundSystem
 
startSystem(AcquisitionControl) - Method in class nidaqdev.NIDAQProcess
 
startSystem(AcquisitionControl) - Method in class simulatedAcquisition.SimProcess
 
startTime - Variable in class binaryFileStorage.BinaryStoreProcess
 
startTime - Variable in class dataMap.OfflineDataMapPoint
Start time of map point data
startTime - Variable in class likelihoodDetectionModule.thresholdDetector.DetectionTracker
 
startTime() - Method in class likelihoodDetectionModule.thresholdDetector.DetectionTracker
 
startTime - Variable in class nmeaEmulator.InfoPanel
 
startTime - Variable in class nmeaEmulator.TimesDialog
 
startTime - Variable in class noiseMonitor.NoiseTabPanel
 
startTime - Variable in class PamguardMVC.OfflineDataMapPoint
Start time of map point data
startTime - Variable in class pamScrollSystem.LoadOptionsDialog
 
startTime - Variable in class PamView.ViewTimesDialog
 
startTime - Variable in class rocca.RoccaWhistleSelect
 
startTime - Variable in class whistleClassifier.training.ClassifierTrainingDialog.ProgressPanel
 
startTime - Variable in class whistleDetector.WhistleEventLogger
 
startTimeArrow - Variable in class dataMap.DataStreamPanel
 
startTimeMillis - Variable in class clickDetector.ClickDetector
 
startTimeMillis - Variable in class simulatedAcquisition.SimProcess
 
startTimeMillis - Variable in class simulatedAcquisition.SimSound
 
startTimeMillis - Variable in class SoundRecorder.RecordingInfo
 
startTimeMillis - Variable in class whistleDetector.EventDataUnit
 
startTimeMS - Variable in class Acquisition.FileInputSystem
 
startTimeNano - Variable in class ipcomms.Consumer
 
startTimer() - Method in class depthReadout.DepthControl
 
startTraining() - Method in class whistleClassifier.training.ClassifierTrainingDialog
 
startupErrors - Static variable in class PamUtils.Splash
 
state - Variable in class clickDetector.offlineFuncs.BatchFileConversion.ConversionProgress
 
state - Variable in class likelihoodDetectionModule.TargetConfiguration
The state.
state - Variable in class likelihoodDetectionModule.TargetNode
 
state - Variable in class Logging.LogToFlatFile
 
state - Variable in class Map.GetMapFile
 
state - Variable in class PamView.GuiParameters
 
STATE_COUNTFILES - Static variable in class clickDetector.offlineFuncs.BatchFileConversion.ConversionProgress
 
STATE_DONE - Static variable in class clickDetector.offlineFuncs.BatchFileConversion.ConversionProgress
 
STATE_IDLE - Static variable in class clickDetector.offlineFuncs.BatchFileConversion.ConversionProgress
 
STATE_RUNNING - Static variable in class clickDetector.offlineFuncs.BatchFileConversion.ConversionProgress
 
stateChanged(ChangeEvent) - Method in class dataMap.ScalePanel.HScrollListener
 
stateChanged(ChangeEvent) - Method in class pamScrollSystem.PamScrollSlider.SliderListener
 
stateChanged(ChangeEvent) - Method in class pamScrollSystem.RangeSpinner.SpinnerListener
 
stateChanged(ChangeEvent) - Method in class PamView.PamGui.tabListener
 
stateChanged(ChangeEvent) - Method in class PamView.PamSymbolDialog.ColorListener
 
stateChanged(ChangeEvent) - Method in class PamView.PamSymbolDialog.HeightListener
 
stateChanged(ChangeEvent) - Method in class PamView.PamSymbolDialog.ThickListener
 
stateChanged(ChangeEvent) - Method in class PamView.PamSymbolDialog.WidthListener
 
stateChanged(ChangeEvent) - Method in class videoRangePanel.ImageAnglePanel.TiltListener
 
stateChanged(ChangeEvent) - Method in class videoRangePanel.VRSidePanel.VRPanel.BrightnessChange
 
statementCon - Variable in class generalDatabase.SQLLogging
 
staticButton - Variable in class Array.HydrophoneDialogPanel.StaticTowedPanel
 
staticData - Variable in class AIS.AISDataUnit
 
STATICDATABITS - Static variable in class AIS.AISDataUnit
 
staticDraught - Variable in class AIS.AISStaticData
 
StaticHydrophoneLocator - Class in Array
 
StaticHydrophoneLocator(PamArray) - Constructor for class Array.StaticHydrophoneLocator
for a static hydrophone array, the anlge can only ever be relative to North so don't need to use anlgeType here.
staticPositionPanel - Variable in class Array.HydrophoneDialogPanel
 
staticTowedPanel - Variable in class Array.HydrophoneDialogPanel
 
stationDetectors - Variable in class loc3d_Thode.TowedArray3DProcess
reference to a list of detectors handling data from a single channel each.
stationHeight - Variable in class beakedWhaleProtocol.BeakedDialog
 
stationList - Variable in class loc3d_Thode.CrossStationMatcher
 
StationQueue - Class in loc3d_Thode
StationQueue--
StationQueue(int) - Constructor for class loc3d_Thode.StationQueue
 
Stats - package Stats
 
statsRun - Variable in class rocca.RoccaContourDataBlock
flag indicating whether or not the statistics have been run
statsSelectionPanel - Variable in class noiseMonitor.NoiseTabPanel
 
statsWindowPos - Variable in class pamMaths.HistogramDisplay
 
status - Variable in class Acquisition.AcquisitionLogging
 
status - Variable in class Acquisition.DaqStatusDataUnit
 
status - Variable in class beakedWhaleProtocol.BeakedExperimentData
 
status - Variable in class binaryFileStorage.BinaryMapMakeProgress
 
status - Variable in class clickDetector.offlineFuncs.OfflineReanalDialog
 
status - Variable in class generalDatabase.CreateMapInfo
 
status - Variable in class listening.ListeningEffortData
 
status - Variable in class Localiser.GroupDetection
 
status - Variable in class nmeaEmulator.EmulationProgress
 
status - Variable in class nmeaEmulator.NMEAFrontEnd
 
status - Variable in class offlineProcessing.OLProcessDialog
 
status - Variable in class offlineProcessing.TaskMonitorData
 
status - Variable in class whistleDetector.EventDataUnit
 
STATUS_ANALYSING_FILES - Static variable in class binaryFileStorage.BinaryMapMakeProgress
 
STATUS_BINME - Static variable in class clickDetector.ClickTrainDetection
 
STATUS_CLOSED - Static variable in class clickDetector.ClickTrainDetection
 
STATUS_CLOSED - Static variable in class Localiser.GroupDetection
 
STATUS_CLOSED - Static variable in class whistleDetector.EventDataUnit
 
STATUS_COMPLETE - Static variable in class clickDetector.offlineFuncs.OfflineReanalDialog
 
STATUS_COUNTING_FILES - Static variable in class binaryFileStorage.BinaryMapMakeProgress
 
STATUS_IDLE - Static variable in class binaryFileStorage.BinaryMapMakeProgress
 
STATUS_IDLE - Static variable in class nmeaEmulator.EmulationProgress
 
STATUS_IDLE - Static variable in class nmeaEmulator.NMEAFrontEnd
 
STATUS_MESSAGE - Static variable in class nmeaEmulator.EmulationProgress
 
STATUS_NOTSTARTED - Static variable in class clickDetector.offlineFuncs.OfflineReanalDialog
 
STATUS_OPEN - Static variable in class clickDetector.ClickTrainDetection
 
STATUS_OPEN - Static variable in class Localiser.GroupDetection
 
STATUS_OPEN - Static variable in class whistleDetector.EventDataUnit
 
STATUS_RUNNING - Static variable in class clickDetector.offlineFuncs.OfflineReanalDialog
 
STATUS_RUNNING - Static variable in class nmeaEmulator.EmulationProgress
 
STATUS_RUNNING - Static variable in class nmeaEmulator.NMEAFrontEnd
 
STATUS_SORTING - Static variable in class binaryFileStorage.BinaryMapMakeProgress
 
STATUS_STARTING - Static variable in class clickDetector.ClickTrainDetection
 
STATUS_STOPPED - Static variable in class clickDetector.offlineFuncs.OfflineReanalDialog
 
statusBar - Variable in class PamView.PamStatusBar
 
statusBarComponent - Variable in class Acquisition.AcquisitionControl
 
statusBarText - Variable in class Acquisition.AcquisitionControl
 
statusData - Variable in class beakedWhaleProtocol.BeakedSidePanel
 
statusDuration - Variable in class listening.ThingHeardTabPanelControl.EffortPanel
 
statusPanel - Variable in class Acquisition.FileInputSystem
 
statusText - Variable in class videoRangePanel.VRSidePanel
 
statusTime - Variable in class listening.ThingHeardTabPanelControl.EffortPanel
 
std - Variable in class fftManager.ClickRemoval
 
STD - Class in pamMaths
Calculate the mean and standard deviation of an double array.
STD() - Constructor for class pamMaths.STD
 
std - Variable in class pamMaths.STD
 
std - Variable in class whitesWhistleDetector.ClickRemoval
 
stdConfusion - Variable in class whistleClassifier.FragmentClassifierParams
 
stdConfusion - Variable in class whistleClassifier.training.ClassifierTrainer
 
steadyState - Variable in class likelihoodDetectionModule.normalizer.SlidingAverager
 
step - Variable in class decimator.DecimatorProcess
step size between samples.
step - Variable in class rocca.RoccaContourDataUnit
 
step - Variable in class videoRangePanel.ImageAnglePanel.AngleButtonListener
 
stepImageAngle(double) - Method in class videoRangePanel.VRControl
 
stepSize - Variable in class pamScrollSystem.LoadOptionsDialog
 
stepSizeMillis - Variable in class pamScrollSystem.PamScrollerData
Scroller step size in millis (this will often be seconds or even minutes)
stillRunning - Variable in class simulatedAcquisition.SimProcess
 
stop() - Method in class angleMeasurement.FluxgateWorldAngles
 
Stop() - Method in class clickDetector.offlineFuncs.ClicksOffline.ReanalWorker
 
stop() - Method in class nmeaEmulator.NMEAFrontEnd.SimWorker
 
stop() - Method in class nmeaEmulator.NMEAOutdialog
 
stop() - Method in class whistleClassifier.training.ClassifierTrainer
 
stop - Variable in class whistleClassifier.training.ClassifierTrainingDialog.RunTrainingPanel
 
stopActiveNMEAsource - Variable in class NMEA.AcquireNmeaData
 
stopAllThreads() - Method in class terrella.TerrellaProcess
 
stopBandRipple - Variable in class Filters.FilterParams
 
stopBitData - Variable in class serialComms.SerialPortPanel
 
stopBits - Variable in class portcomms.SerialPortParameters
 
stopBitsLabel - Variable in class terrella.SerialParametersDialogPanel
 
stopBitsList - Variable in class serialComms.SerialPortPanel
 
stopBitStrings - Variable in class serialComms.SerialPortPanel
 
stopBootstrap - Variable in class whistleClassifier.training.ClassifierTrainer
 
stopButton - Variable in class nmeaEmulator.NMEAOutdialog
 
stopCapture - Variable in class Acquisition.SoundCardSystem
 
stopCapture - Variable in class asiojni.ASIOSoundSystem
 
stopCellEditing() - Method in class likelihoodDetectionModule.AbstractCellEditor
 
stopCellEditing() - Method in class likelihoodDetectionModule.TreeTable.DoubleEditor
 
stopDAQ() - Method in class nidaqdev.Nidaq
 
stopFlag - Variable in class clickDetector.offlineFuncs.BatchFileConversion
 
stopFlag - Variable in class clickDetector.offlineFuncs.ClicksOffline.ReanalWorker
 
stopLogData() - Method in class Logging.LogDataObserver
 
stopMenuEnabler - Variable in class PamView.PamGui
 
stopModel() - Method in class PamModel.PamModel
 
stopModel() - Method in interface PamModel.PamModelInterface
Stops Pam detection
stopNow - Variable in class nmeaEmulator.NMEAFrontEnd.SimWorker
 
stopPlayback() - Method in class nidaqdev.NIFilePlayback
 
stopPlayback() - Method in interface soundPlayback.FilePlaybackDevice
Stop playback, clean up buffers, etc.
stopPlayback() - Method in class soundPlayback.SoundCardFilePlayback
 
stopProcessing() - Method in class backendCInterfase.BackendManager
Tell the C side to stop acquiring data.
stopRecording() - Method in class SoundRecorder.RecorderProcess
 
stopSim() - Method in class nmeaEmulator.NMEAFrontEnd
 
stopSystem(AcquisitionControl) - Method in class Acquisition.DaqSystem
Stop the DaqSystem.
stopSystem(AcquisitionControl) - Method in class Acquisition.FileInputSystem
 
stopSystem(AcquisitionControl) - Method in class Acquisition.SoundCardSystem
 
stopSystem(AcquisitionControl) - Method in class asiojni.ASIOSoundSystem
 
stopSystem(AcquisitionControl) - Method in class nidaqdev.NIDAQProcess
 
stopSystem(AcquisitionControl) - Method in class simulatedAcquisition.SimProcess
 
stopTraining() - Method in class whistleClassifier.training.ClassifierTrainingDialog
 
storageClosed() - Method in class clickDetector.offlineFuncs.ClicksOffline
Called when the click store has closed Will need to delete all data from the module.
storageClosed() - Method in class SoundRecorder.RecorderProcess
 
storageDirectory - Variable in class clickDetector.ClickParameters
 
storageDirectory - Variable in class clickDetector.dialogs.ClickStorageOptionsDialog
 
storageInitials - Variable in class clickDetector.ClickParameters
 
storageInitials - Variable in class clickDetector.dialogs.ClickStorageOptionsDialog
 
storageLocation - Variable in class Acquisition.offlineFuncs.OfflineDAQDialogPanel
 
storageLocation - Variable in class binaryFileStorage.BinaryStorageDialogPanel
 
storageSource - Variable in class whistleClassifier.training.TrainingDataSet
 
storageSource - Variable in class whistleClassifier.TrainingDataSet
 
storageStreams - Variable in class binaryFileStorage.BinaryStore
 
storeData(int, long, byte[]) - Method in class binaryFileStorage.BinaryDataSource
 
storeData(int, long, byte[]) - Method in class binaryFileStorage.BinaryOutputStream
Write data to a file
storeData(BinaryObjectData) - Method in class binaryFileStorage.BinaryOutputStream
Write data to a file.
storeData(int, long, byte[], int) - Method in class binaryFileStorage.BinaryOutputStream
Writes data to a file.
storedClick - Variable in class clickDetector.ClickSpectrum
 
storedClick - Variable in class clickDetector.ClickWaveform
 
storedData1221 - Variable in class signal.Hilbert
 
storedFFTArray - Variable in class signal.Hilbert
 
storedGram - Variable in class IshmaelDetector.SgramCorrProcess.PerChannelInfo
 
storedObjects - Variable in class binaryFileStorage.BinaryOutputStream
 
StoredScrollerData - Class in pamScrollSystem
Class to hold a whole load of PamScrollerData objects between runs.
StoredScrollerData() - Constructor for class pamScrollSystem.StoredScrollerData
 
storedSpectrum - Variable in class clickDetector.ClickSpectrum
 
storedSpectrumLock - Variable in class clickDetector.ClickSpectrum
 
storedWaveformLock - Variable in class clickDetector.ClickWaveform
 
storeLocation - Variable in class binaryFileStorage.BinaryStoreSettings
 
storeName - Variable in class pamScrollSystem.LoadingDataDialog
 
storeOk - Variable in class whistleClassifier.FileTrainingStore
 
storeOk - Variable in class whistleClassifier.training.FileTrainingStore
 
storeType - Variable in class pamScrollSystem.LoadQueueProgressData
 
StraightHydrophoneLocator - Class in Array
Straight Hydrophone Locator, uses GPS heading information from GPS and assumes that the hydrophones are just sticking straight out the back of the boat as though on a rigid stick.
StraightHydrophoneLocator(PamArray) - Constructor for class Array.StraightHydrophoneLocator
 
StraightLineGrid - Class in Map
 
StraightLineGrid() - Constructor for class Map.StraightLineGrid
 
STREAM_CLOSED - Static variable in class Acquisition.DaqSystem
 
STREAM_ENDED - Static variable in class Acquisition.DaqSystem
 
STREAM_OPEN - Static variable in class Acquisition.DaqSystem
 
STREAM_PAUSED - Static variable in class Acquisition.DaqSystem
 
STREAM_RUNNING - Static variable in class Acquisition.DaqSystem
 
streamClosed() - Method in class Acquisition.AcquisitionProcess
 
streamEnded() - Method in class Acquisition.AcquisitionProcess
 
Streamer - Class in Array
Contains information on an individual streamer - i.e.
Streamer(double, double, double, double, double, double) - Constructor for class Array.Streamer
 
Streamer() - Constructor for class Array.Streamer
 
streamer - Variable in class Array.StreamerDialog
 
streamerColumns - Variable in class Array.HydrophoneDialogPanel
 
StreamerDialog - Class in Array
 
StreamerDialog(Window) - Constructor for class Array.StreamerDialog
 
streamerId - Variable in class Array.Hydrophone
 
streamerPanel - Variable in class Array.HydrophoneDialogPanel
 
streamers - Variable in class Array.HydrophoneElementDialog.GeneralPanel
 
streamers - Variable in class Array.PamArray
 
streamerTable - Variable in class Array.HydrophoneDialogPanel.StreamerPanel
 
streamerTableData - Variable in class Array.HydrophoneDialogPanel.StreamerPanel
 
streamName - Variable in class binaryFileStorage.BinaryHeader
 
streamName - Variable in class binaryFileStorage.BinaryMapMakeProgress
 
streamName - Variable in class binaryFileStorage.BinaryMapMakingDialog
 
streamName - Variable in class clickDetector.ClickBinaryDataSource
 
streamName - Variable in class generalDatabase.DBMapMakingDialog
 
streamName - Variable in class pamScrollSystem.LoadingDataDialog
 
streamName - Variable in class pamScrollSystem.LoadQueueProgressData
 
streamName - Variable in class whistlesAndMoans.WhistleBinaryDataSource
 
streamOpen() - Method in class Acquisition.AcquisitionProcess
 
streamPaused() - Method in class Acquisition.AcquisitionProcess
 
streamProgress - Variable in class binaryFileStorage.BinaryMapMakingDialog
 
streamProgress - Variable in class generalDatabase.DBMapMakingDialog
 
streamProgress - Variable in class pamScrollSystem.LoadingDataDialog
 
streamStatus - Variable in class Acquisition.DaqSystem
 
stringData - Variable in class PamUtils.Ascii6Bit
 
stringHeight - Variable in class Map.Compass
 
stringHeight - Variable in class Spectrogram.ScalePanel
 
stringLengthLabel - Variable in class terrella.SerialParametersDialogPanel
 
stringWidth - Variable in class Map.Compass
 
stringWidth - Variable in class Spectrogram.ScalePanel
 
STRIPHEIGHT - Static variable in class dataMap.SettingsStrip
 
structureEndPoint - Variable in class clickDetector.RainbowFile
 
stylePanel - Variable in class radardisplay.RadarParametersDialog
 
styles - Variable in class tipOfTheDay.PamTipViewer
 
sub(PamVector) - Method in class pamMaths.PamVector
Subtract another vector from this vector and return the result in a new Vector
subarray_deck_distance - Variable in class loc3d_Thode.TowedArray3DProcess
 
subarray_maxtime - Variable in class loc3d_Thode.TowedArray3DProcess
 
subDetections - Variable in class PamDetection.PamDetection
 
subDetectionSyncronisation - Variable in class PamDetection.PamDetection
 
subFolders - Variable in class Acquisition.CheckWavFileHeaders
 
subFolders - Variable in class Acquisition.FolderInputParameters
 
subFolders - Variable in class Acquisition.FolderInputSystem
 
submitActionPerformed(ActionEvent) - Method in class UserInput.UserInputPanel
 
submitButton - Variable in class UserInput.UserInputPanel
 
submitText() - Method in class UserInput.UserInputPanel
 
submitText() - Method in class UserInput.UserInputSidePanel.SidePanel
 
subscribeDataBlocks() - Method in class Spectrogram.SpectrogramDisplay.SpectrogramPanel
 
subscribeDataBlocks() - Method in class Spectrogram.SpectrogramDisplay
Create lists of data blocks that each panel is viewing so they can plot the data efficiently.
subscribeDetectors() - Method in class radardisplay.RadarDisplay
 
subscribeViewerBlocks() - Method in class Map.SimpleMap
Subscribes a variety of data blocks to the scroll bar.
subscribeViewScrollData() - Method in class Spectrogram.SpectrogramDisplay
Subscribe overlaying data to the view scroller.
subsequentTimes - Variable in class videoRangePanel.ImageAnglePanel.AngleButtonListener
 
sumComponentsSquared(PamVector) - Method in class pamMaths.PamVector
A bit like a dot product, but the three components are added in quadrature.
sumLength - Variable in class IshmaelDetector.EnergySumProcess
 
summaryPanel - Variable in class dataMap.DataMapPanel
 
SummaryPanel - Class in dataMap
Display for summary data inserted at top of DataMap
SummaryPanel(DataMapControl, DataMapPanel) - Constructor for class dataMap.SummaryPanel
 
sumSquared(double[]) - Static method in class PamUtils.CoordUtils
Find the sum of squares of a vector.
superDetections - Variable in class PamDetection.PamDetection
 
superDetectionSyncronisation - Variable in class PamDetection.PamDetection
 
supportsChannelLists() - Method in class Acquisition.DaqSystem
 
supportsChannelLists() - Method in class asiojni.ASIOSoundSystem
 
supportsChannelLists() - Method in class nidaqdev.NIDAQProcess
 
supressedSpectrogram - Variable in class whistleDetector.WhistleDetector
 
SurfaceEcho - Class in propagation
 
SurfaceEcho(PropagationModel) - Constructor for class propagation.SurfaceEcho
 
suspectEventTimes - Variable in class clickDetector.offlineFuncs.OfflineEventDataUnit
Flag to say that event times may be a bit dodgy.
swap(int[], int, int) - Method in class whistlesAndMoans.MedianFilter
 
swap(double[], int, int) - Method in class whistlesAndMoans.MedianFilter
 
swap(int[], int, int) - Method in class whitesWhistleDetector.MedianFilter
 
swap(double[], int, int) - Method in class whitesWhistleDetector.MedianFilter
 
swapSides() - Method in class beakedWhaleProtocol.BeakedControl
can be called as the start point is being approached.
swapSides() - Method in class beakedWhaleProtocol.BeakedExperimentData
 
swapSides - Variable in class beakedWhaleProtocol.BeakedSidePanel
 
sweep - Variable in class rocca.RoccaContourDataUnit
 
sweepClassifier - Variable in class clickDetector.ClickClassifiers.basicSweep.CodeSpinnerModel
 
SweepClassifier - Class in clickDetector.ClickClassifiers.basicSweep
An improvements on the BasicClickIdentifier based on work by Gillespie and Caillat in 2009.
SweepClassifier(ClickControl) - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifier
 
sweepClassifier - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog
 
sweepClassifier - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierPanel
 
sweepClassifier - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierWorker
 
SweepClassifierDialog - Class in clickDetector.ClickClassifiers.basicSweep
 
SweepClassifierDialog(Window, SweepClassifier) - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog
 
SweepClassifierDialog.DefaultSetting - Class in clickDetector.ClickClassifiers.basicSweep
 
SweepClassifierDialog.DefaultSetting(String) - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.DefaultSetting
 
SweepClassifierDialog.EnergyBandsBlock - Class in clickDetector.ClickClassifiers.basicSweep
 
SweepClassifierDialog.EnergyBandsBlock() - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.EnergyBandsBlock
 
SweepClassifierDialog.IdBlock - Class in clickDetector.ClickClassifiers.basicSweep
 
SweepClassifierDialog.IdBlock(String, Boolean) - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.IdBlock
 
SweepClassifierDialog.IdBlock.EnableBox - Class in clickDetector.ClickClassifiers.basicSweep
 
SweepClassifierDialog.IdBlock.EnableBox() - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.IdBlock.EnableBox
 
SweepClassifierDialog.LengthBlock - Class in clickDetector.ClickClassifiers.basicSweep
 
SweepClassifierDialog.LengthBlock() - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.LengthBlock
 
SweepClassifierDialog.OptionsBlock - Class in clickDetector.ClickClassifiers.basicSweep
 
SweepClassifierDialog.OptionsBlock() - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.OptionsBlock
 
SweepClassifierDialog.OptionsBlock.RestrictLength - Class in clickDetector.ClickClassifiers.basicSweep
 
SweepClassifierDialog.OptionsBlock.RestrictLength() - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.OptionsBlock.RestrictLength
 
SweepClassifierDialog.PeakFreqBlock - Class in clickDetector.ClickClassifiers.basicSweep
 
SweepClassifierDialog.PeakFreqBlock() - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.PeakFreqBlock
 
SweepClassifierDialog.ZeroXBlock - Class in clickDetector.ClickClassifiers.basicSweep
 
SweepClassifierDialog.ZeroXBlock() - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.ZeroXBlock
 
SweepClassifierPanel - Class in clickDetector.ClickClassifiers.basicSweep
 
SweepClassifierPanel(SweepClassifier, Window, ClickControl) - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierPanel
 
sweepClassifierParameters - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifier
 
SweepClassifierParameters - Class in clickDetector.ClickClassifiers.basicSweep
 
SweepClassifierParameters() - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierParameters
 
sweepClassifierSet - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog
 
SweepClassifierSet - Class in clickDetector.ClickClassifiers.basicSweep
 
SweepClassifierSet() - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
sweepClassifierWorker - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifier
 
SweepClassifierWorker - Class in clickDetector.ClickClassifiers.basicSweep
Do the actual work of the click seep classifier Separated into a separate class for clarity and to keep sepeare from all the control functions.
SweepClassifierWorker(ClickControl, SweepClassifier) - Constructor for class clickDetector.ClickClassifiers.basicSweep.SweepClassifierWorker
 
sweepIdentifier - Variable in class clickDetector.ClickClassifiers.ClickClassifierManager
 
sweepRate - Variable in class clickDetector.ClickClassifiers.basicSweep.ZeroCrossingStats
Zero crossing sweep rate in Hz/second
sweepWeight - Variable in class whistleDetector.WhistleParametersDialog.LinkPanel
 
sweepWeight2 - Variable in class whistleDetector.WhistleParametersDialog.LinkPanel
 
swingWorker - Variable in class PamController.AWTScheduler.ScheduledWorkerTask
 
swingWorker - Variable in class PamController.AWTScheduler.WorkerPropertyChangeListener
 
switchModules(PamControlledUnit, PamControlledUnit) - Method in class PamController.PamController
Swaps the positions of two modules in the main list of modules and also swaps their tabs (if they have them).
sx - Variable in class Stats.LinFit
 
sxoss - Variable in class Stats.LinFit
 
sy - Variable in class Stats.LinFit
 
symbol - Variable in class angleMeasurement.AngleCalibrationDialog.MeasuredCorrection
 
symbol - Variable in class angleMeasurement.AngleCalibrationDialog.TrueToMeasured.TPlotPanel
 
symbol - Variable in class Array.Hydrophone
 
symbol - Variable in class beakedWhaleProtocol.BeakedGraphics
 
symbol - Variable in class clickDetector.ClickClassifiers.basic.ClickTypeDialog.SymbolPanel
 
symbol - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
symbol - Variable in class clickDetector.ClickTypeParams
 
symbol - Variable in class clickDetector.offlineFuncs.OfflineEventListPanel.EventTableModel
 
symbol - Variable in class landMarks.LandmarkData
 
symbol - Variable in class listening.SpeciesItem
 
symbol - Variable in class noiseMonitor.NoiseTabPanel.PlotPanel
 
symbol - Variable in class noiseMonitor.NoiseTabPanel.SpecPlotPanel
 
symbol - Variable in class PamView.LineKeyItem
 
symbol - Variable in class PamView.PamSymbol
 
symbol - Variable in class PamView.PamSymbolViewer
 
symbol - Variable in class videoRangePanel.VRPanel.VRSymbolManager
 
SYMBOL_CIRCLE - Static variable in class PamView.PamSymbol
 
SYMBOL_CROSS - Static variable in class PamView.PamSymbol
 
SYMBOL_CROSS2 - Static variable in class PamView.PamSymbol
 
SYMBOL_CUSTOMPOLYGON - Static variable in class PamView.PamSymbol
 
SYMBOL_DIAMOND - Static variable in class PamView.PamSymbol
 
SYMBOL_DOUBLETRIANGLEL - Static variable in class PamView.PamSymbol
 
SYMBOL_DOUBLETRIANGLER - Static variable in class PamView.PamSymbol
 
SYMBOL_HEXAGRAM - Static variable in class PamView.PamSymbol
 
SYMBOL_LINESEGMENT - Static variable in class PamView.PamSymbol
 
SYMBOL_LINESTART - Static variable in class PamView.PamSymbol
 
SYMBOL_NONE - Static variable in class PamView.PamSymbol
 
SYMBOL_PENTAGRAM - Static variable in class PamView.PamSymbol
 
SYMBOL_POINT - Static variable in class PamView.PamSymbol
 
SYMBOL_REGIONSTART - Static variable in class PamView.PamSymbol
 
SYMBOL_SQUARE - Static variable in class PamView.PamSymbol
 
SYMBOL_STAR - Static variable in class PamView.PamSymbol
 
SYMBOL_TRIANGLED - Static variable in class PamView.PamSymbol
 
SYMBOL_TRIANGLEL - Static variable in class PamView.PamSymbol
 
SYMBOL_TRIANGLER - Static variable in class PamView.PamSymbol
 
SYMBOL_TRIANGLEU - Static variable in class PamView.PamSymbol
 
symbolAction() - Method in class listening.ListeningDialog
 
symbolButton - Variable in class PamView.PamSymbolDialog
 
symbolHeight - Variable in class PamView.PamSymbolDialog
 
symbolInfo - Variable in class videoRangePanel.VRPanel.VRSymbolManager
 
symbolItem - Variable in class generalDatabase.lookupTables.LookUpTables
 
SymbolKeyItem - Class in PamView
 
SymbolKeyItem(PamSymbol, String) - Constructor for class PamView.SymbolKeyItem
 
symbolPanel - Variable in class clickDetector.ClickClassifiers.basic.ClickTypeDialog
 
symbolPanel - Variable in class PamView.PamSymbolSelector
 
symbolPanel - Variable in class PamView.PamSymbolViewer
 
SymbolSettingsStoreUnit - Class in PamView
 
SymbolSettingsStoreUnit(String, PamSymbol) - Constructor for class PamView.SymbolSettingsStoreUnit
 
symbolType - Variable in class generalDatabase.lookupTables.LookupItem
 
symbolTypeButton - Variable in class clickDetector.ClickClassifiers.basic.ClickTypeDialog
 
symbolTypes - Variable in class noiseMonitor.NoiseTabPanel
 
symbolViewer - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.OptionsBlock
 
symbolWidth - Variable in class PamView.PamSymbolDialog
 
synchObject - Variable in class performanceTests.PerformanceDialog
 
syncWithAquisitionSettings(AcquisitionSettings) - Method in class likelihoodDetectionModule.LikelihoodDetectionParameters
Sync with aquisition settings.
syncWithChannelMap(int) - Method in class likelihoodDetectionModule.LikelihoodDetectionParameters
Sync with channel map.
sysGetProcessCPUTime() - Static method in class PamUtils.SystemTiming
 
sysSetSystemTime(int, int, int, int, int, int, int) - Static method in class PamUtils.SystemTiming
Set the computers system time
systemDialogPanel - Variable in class generalDatabase.DBDialog
 
SystemDialogPanel - Interface in generalDatabase
Different db systems can proide a system specific dialog panel by implementing this interface
systemHasStopped(boolean) - Method in class Acquisition.FileInputSystem
 
SystemInfo - Class in performanceTests
Doesn't actually do anything, but does collate some system information
SystemInfo() - Constructor for class performanceTests.SystemInfo
 
systemList - Variable in class Acquisition.AcquisitionControl
 
systemList - Variable in class generalDatabase.DBDialog
 
SYSTEMNAME - Static variable in class generalDatabase.MSAccessSystem
 
systemNumber - Variable in class depthReadout.DepthParameters
 
systemPanel - Variable in class Acquisition.AcquisitionControl
 
systemPrepared - Variable in class Acquisition.AcquisitionProcess
 
SystemTiming - Class in PamUtils
Class for some system based time functions, primarily to get CPU time for the process and to set the system time.
SystemTiming() - Constructor for class PamUtils.SystemTiming
 

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