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sampleNoise - Variable in class clickDetector.ClickParameters
 
sampleRate - Variable in class Acquisition.AcquisitionCParameters
 
sampleRate - Variable in class Acquisition.AcquisitionParameters
 
sampleRate - Variable in class Acquisition.DaqStatusDataUnit
 
sampleRate - Variable in class difar.DifarParameters.SpeciesParams
 
sampleRate - Variable in class SoundRecorder.RecordingInfo
 
sampleRateIndex - Variable in class hfDaqCard.SmruDaqParameters
 
sampleRateInfo - Variable in class asiojni.AsioDriverInfo
 
sampleRates - Static variable in class hfDaqCard.SmruDaqParameters
 
samplingRateHz - Variable in class likelihoodDetectionModule.AcquisitionSettings
The sampling rate of the audio data.
save(SLResult) - Method in class staticLocaliser.StaticLocaliserControl
Saves a static localisation result directly to the database.
save(boolean) - Method in class targetMotionModule.TargetMotionControl
Save localisation data
SAVE_FILE - Static variable in class PamView.PamFileBrowser
 
saveAll() - Method in class staticLocaliser.StaticLocaliserControl
Saves either all the possible results from all the algorithms, or if showOnlyLowestChiValueDelay is selected in the main options panel saves only the result with the lowest chi value but for all algorithms.
saveArrayToFile(PamArray) - Static method in class Array.ArrayManager
 
saveBest() - Method in class staticLocaliser.StaticLocaliserControl
Saves only the the best result.
saveButton() - Method in class difar.display.DIFARUnitControlPanel
 
saveClassifierParams(Window, FragmentClassifierParams) - Method in class whistleClassifier.WhistleClassifierControl
Save a set of classifier params.
saveClicks() - Method in class clickDetector.offlineFuncs.ClicksOffline
 
saveContourPoints(RoccaContourDataBlock, int, int, String) - Method in class rocca.RoccaProcess
Saves the contour points in the datablock in a csv file.
saveContourPoints() - Method in class rocca.RoccaSpecPopUp
Saves the contour points in the datablock in a csv file.
saveContourStats(RoccaContourDataBlock, int, int, String) - Method in class rocca.RoccaProcess
Saves all contour stats to the contour stats summary file, as defined in the Rocca Parameters.
saveContourStats(RoccaContourDataBlock, int, int, String, String) - Method in class rocca.RoccaProcess
Saves all contour stats to the contour stats summary file, as defined in the Rocca Parameters.
saveContourStats() - Method in class rocca.RoccaSpecPopUp
Saves all contour stats to the contour stats summary file, as defined in the Rocca Parameters.
saveCrossing(boolean) - Method in class difar.DifarDataUnit
Move the crossing info from it's temp position to a saved position.
saveCSVMatchResult(SLResult, FileWriter) - Static method in class staticLocaliser.SLCSVLogging
 
saveCSVResult(SLResult, FileWriter) - Static method in class staticLocaliser.SLCSVLogging
 
saveCSVResultToFile(String, double, int, int, int) - Static method in class staticLocaliser.DetectionNCSVLogging
 
saveCSVResultToFile(String, SLResult, int) - Static method in class staticLocaliser.SLCSVLogging
Save localisation to a csv file.
saveData(PamDataBlock) - Method in class Acquisition.AcquisitionControl
 
saveData(PamDataBlock) - Method in class Acquisition.offlineFuncs.OfflineFileServer
 
saveData(PamTableDefinition, PamDataUnit) - Method in class annotation.calcs.snr.SnrSqlAddon
 
saveData(PamTableDefinition, PamDataUnit) - Method in class annotation.string.StringSQLLogging
 
saveData(PamDataUnit) - Method in class binaryFileStorage.BinaryDataSource
Save data into the binary stream
saveData(PamDataBlock) - Method in class binaryFileStorage.BinaryStore
Saves data in a PamDataBlock.
saveData(PamDataBlock) - Method in class cpod.CPODControl
 
saveData(PamDataBlock) - Method in class d3.D3Control
 
saveData(PamDataBlock) - Method in class decimator.DecimatorControl
 
saveData(PamDataBlock) - Method in class generalDatabase.DBControlUnit
 
saveData(PamTableDefinition, PamDataUnit) - Method in interface generalDatabase.SQLLoggingAddon
Save data - that is transfer data from the pamDataUnit to the data objects within the table definition
saveData() - Method in class IshmaelDetector.IshDetSave
 
saveData(PamDataBlock) - Method in interface PamController.OfflineDataStore
Save data previously loaded from the store during offline viewing.
saveData(TargetMotionResult) - Method in class targetMotionModule.panels.EventControlPanel
 
saveData(TargetMotionResult) - Method in interface targetMotionModule.panels.TargetMotionControlPanel
Each control panel will have a different kind of data unit.
saveData(PamTableDefinition, PamDataUnit) - Method in class targetMotionOld.TargetMotionSQLLogging
 
SaveDatagramUnit - Static variable in class difar.DIFARMessage
Called when save button pressed or single click angle selection used.
SaveDatagramUnitWithoutRange - Static variable in class difar.DIFARMessage
Called when save button pressed or single click angle selection used.
saveDataMaps() - Method in class binaryFileStorage.DataMapSerialiser
 
saveDetectionNtoCSV(double, int, int, int, FileWriter) - Static method in class staticLocaliser.DetectionNCSVLogging
 
saveFileBrowser() - Method in class clickDetector.ClickSpectrumTemplateEditDialog
Opens file save dialog and allows user to select save location.
saveFinalSettings() - Method in class PamController.PamSettingManager
Call just before PAMGUARD exits to save the settings either to psf and / or database tables.
saveGPSData(GpsData) - Method in class GPS.ImportGPSData
 
saveGroup() - Method in class difar.DifarDataUnit
 
saveIgnoreRangeButton() - Method in class difar.display.DIFARUnitControlPanel
 
saveIndextoCSV(ArrayList<Integer>, FileWriter) - Static method in class staticLocaliser.TimeDelaysCSVLogging
 
saveOfflineData(DBControlUnit, Connection) - Method in class clickDetector.offlineFuncs.OfflineEventLogging
 
saveOfflineData(DBControlUnit, Connection) - Method in class generalDatabase.SQLLogging
Save offline data in viewer mode.
savePolpredTextFile(File) - Method in class videoRangePanel.importTideData.TideManager
 
savePolpredTextFile(String) - Method in class videoRangePanel.importTideData.TideManager
Go through the file and save data.
SaveRequirements - Class in PamguardMVC
Class which can tell a data store what type of work is needed to re-save the data.
SaveRequirements(PamDataBlock) - Constructor for class PamguardMVC.SaveRequirements
 
saveSerialisedMap() - Method in class Acquisition.offlineFuncs.OfflineFileServer
 
saveSettings(int) - Method in class PamController.PamSettingManager
Save settings to a psf file and / or the database tables.
saveSettings(JFrame) - Method in class PamController.PamSettingManager
saves settings in the current file
saveSettingsAs(JFrame) - Method in class PamController.PamSettingManager
Save settings to a new psf file.
saveSettingsAsXML(JFrame) - Method in class PamController.PamSettingManager
Save settings to a new psf file.
saveSettingsToDB() - Method in class generalDatabase.DBControl
 
saveSettingsToDB() - Method in class generalDatabase.DBProcess
Called from the settings manager whenever settings would normally be saved to file.
saveSettingsToFile() - Method in class PamController.PamSettingManager
 
saveSettingsToFile(String) - Method in class PamController.PamSettingManager
Save configuration settings to the default (most recently used) psf file.
saveSettingsToXMLFile(File) - Method in class PamController.PamSettingManager
Save configuration settings to a PSFX file (XML).
saveSighting() - Method in class rocca.RoccaSidePanel.SidePanel
Save the sighting information immediately
saveStartSettings(long) - Method in class binaryFileStorage.BinarySettingsStorage
Save the settings in some vaguely sensible format.
saveStartSettings(long) - Method in class binaryFileStorage.BinaryStore
 
saveStartSettings(long) - Method in class generalDatabase.DBControl
 
saveStartSettings(long) - Method in interface PamController.PamSettingsSource
Save the settings in some way or another.
saveTDtoCSV(ArrayList<Double>, FileWriter) - Static method in class staticLocaliser.TimeDelaysCSVLogging
 
saveTemplate() - Method in class clickDetector.ClickSpectrumTemplateEditDialog
Saves the current template and standard deviation to a .csv file.
saveTemplatePlusSpectrums() - Method in class clickDetector.ClickSpectrumTemplateEditDialog
Saves a template plus a list of all the spectrums used in creating that template- note the template is from normalised spectrums but the list of spectrums is not normalised- this gives the maximum amount of data to the user.
saveToDB() - Method in class IMU.IMUImport
 
saveViewerData() - Method in class clickDetector.ClickDataBlock
 
saveViewerData() - Method in class clickDetector.offlineFuncs.OfflineClickLogging
 
saveViewerData() - Method in class clickDetector.offlineFuncs.OfflineEventDataBlock
 
saveViewerData() - Method in class PamController.PamControlledUnit
Save data (to binary files and to database) in viewer mode.
saveViewerData() - Method in class PamController.PamController
Go through all data blocks in all modules and tell them to save.
saveViewerData() - Method in class PamguardMVC.PamDataBlock
Saves data in this data block in offline viewer mode.
saveViewerData() - Method in class PamguardMVC.PamProcess
Save data (to binary files and to database) in viewer mode.
sayBand() - Method in class Filters.FilterParams
 
sayBibolarRange(int) - Static method in class mcc.MccJniInterface
 
sayEta() - Method in class Acquisition.FileInputSystem
 
sayEta(long) - Method in class Acquisition.FileInputSystem
 
sayFilter() - Method in class Filters.IirfFilter
 
sayFormattedValue(double) - Method in class PamUtils.LatLongDialogStrip
 
sayHorizonInfo() - Method in class videoRangePanel.vrmethods.ImageAnglePanel
 
sayLevel(int) - Static method in class alarm.AlarmParameters
 
sayMouseData(Integer, Integer) - Method in class noiseMonitor.NoiseTabPanel
 
sayProgress(DatabaseCheckDialog.CheckProgress) - Method in class clickDetector.offlineFuncs.DatabaseCheckDialog
 
sayProgress(int, long, long, long, int) - Method in interface pamScrollSystem.ViewLoadObserver
Report progress back to the load observer
sayRecorderStatus() - Method in class SoundRecorder.RecorderControl
 
sayRegion() - Method in class whistlesAndMoans.ConnectedRegion
 
saySampleRate() - Method in class hfDaqCard.SmruDaqDialogPanel
 
sayStartTime(long) - Method in class noiseMonitor.NoiseTabPanel
 
sayStatus() - Method in class beakedWhaleProtocol.BeakedSidePanel
 
sayStatus(String) - Method in class SoundRecorder.RecorderSidePanel
 
sayStatus(String) - Method in class SoundRecorder.RecorderTabPanel
 
sayStatus(String) - Method in interface SoundRecorder.RecorderView
 
sayString(char[]) - Static method in class nidaqdev.Nidaq
 
sayType() - Method in class Filters.FilterParams
 
sayValue(double) - Method in class PamUtils.LatLongDialogStrip
Set data in the lat long dialog strip
sayValue(double, boolean) - Method in class PamUtils.LatLongDialogStrip
 
scalarMultMatrix(Complex[][], Complex) - Static method in class PamUtils.MatrixOps
 
SCALE_LIN - Static variable in class Filters.FilterParams
 
SCALE_LOG - Static variable in class Filters.FilterParams
 
SCALE_NONE - Static variable in class dataMap.OfflineDataMap
Vertical scaling - scale each Map data point to a data rate, or don't bother scaling at all.
SCALE_PERDAY - Static variable in class dataMap.OfflineDataMap
 
SCALE_PERHOUR - Static variable in class dataMap.OfflineDataMap
 
SCALE_PERMINUTE - Static variable in class dataMap.OfflineDataMap
 
SCALE_PERSECOND - Static variable in class dataMap.OfflineDataMap
 
scaleA - Variable in class depthReadout.MccDepthParameters.MccSensorParameters
Deth = scaleA * voltage + scaleB;
scaleB - Variable in class depthReadout.MccDepthParameters.MccSensorParameters
 
scaleChange() - Method in class dataMap.ScrollingDataPanel
 
scaleChanged() - Method in class dataMap.DataMapPanel
Called from ScalePanel when anything to do with scaling changes.
scaleData(double, long, int) - Static method in class dataMap.OfflineDataMap
 
scaleData(double) - Method in class pamMaths.PamHistogram
Scale the data in the histogram by the given factor
scaleNames - Static variable in class videoRangePanel.VRParameters
 
ScalePanel - Class in dataMap
 
ScalePanel(DataMapControl, DataMapPanel) - Constructor for class dataMap.ScalePanel
 
ScalePanel - Class in Spectrogram
 
ScalePanel(Image) - Constructor for class Spectrogram.ScalePanel
 
scaleStoreData(double) - Method in class whistleClassifier.BasicFragmentStore
 
scaleStoreData(double) - Method in interface whistleClassifier.FragmentStore
Remove a fraction of the fragments from the store
scaleToggleState - Variable in class noiseBandMonitor.NoiseBandSettings
 
scheduleTask(Runnable) - Method in class PamController.AWTScheduler
Schedules a task for execution.
scoreByAmplitude - Variable in class clickDetector.alarm.ClickAlarmParameters
 
scoreData(PamDataUnit) - Method in class clickDetector.dataSelector.ClickDataSelector
 
scoreData(PamDataUnit) - Method in class difar.dataSelector.DifarDataSelector
 
scoreData(PamDataUnit) - Method in class PamguardMVC.dataSelector.DataSelector
Score a PAMDataUnit.
scoreData(PamDataUnit) - Method in class whistlesAndMoans.dataSelector.WMDDataSelector
 
ScreenSize - Class in PamView
Class to launch a thread which will get the screen size (inlcuding the bounds of multiple monitors)
ScreenSize.GetBounds - Class in PamView
Thread to obtain the screen bounds.
ScreenSize.GetBounds() - Constructor for class PamView.ScreenSize.GetBounds
 
screenToImage(Point) - Method in class videoRangePanel.panels.VRPanel
 
SCROLLABLE - Static variable in class generalDatabase.pamCursor.PamCursorManager
The underlying database does support updateable cursors, so most functionality can be simply passed straight through to the underlying database.
ScrollableBufferedImage - Class in PamView
 
ScrollableBufferedImage(int, int, int) - Constructor for class PamView.ScrollableBufferedImage
 
ScrollablePamCursor - Class in generalDatabase.pamCursor
 
ScrollablePamCursor(EmptyTableDefinition) - Constructor for class generalDatabase.pamCursor.ScrollablePamCursor
 
scrollableTimeRange - Variable in class dataPlots.TDParameters
 
scrollByBlock(int) - Method in class PamView.sliders.PamRangeSliderUI
Moves the selected thumb in the specified direction by a block increment.
scrollByUnit(int) - Method in class PamView.sliders.PamRangeSliderUI
Moves the selected thumb in the specified direction by a unit increment.
scrollChanged() - Method in class dataMap.DataStreamPanel
 
scrollChanged() - Method in class dataMap.SettingsStrip
 
ScrollerCoupling - Class in pamScrollSystem
A class for coupling two or more scrollers.
ScrollerCoupling(String) - Constructor for class pamScrollSystem.ScrollerCoupling
 
scrollImage(int, int, boolean) - Method in class PamView.JBufferedPanel
 
scrollImage(int, int) - Method in class PamView.ScrollableBufferedImage
 
ScrollingDataPanel - Class in dataMap
 
ScrollingDataPanel(DataMapControl, DataMapPanel) - Constructor for class dataMap.ScrollingDataPanel
 
scrollMoved() - Method in class pamScrollSystem.PamScroller
 
scrollMoved() - Method in class pamScrollSystem.PamScrollSlider
 
ScrollPaneAddon - Class in pamScrollSystem
Small set of scroll controls which can be inserted into any window for controlling the loading of data in viewer mode.
ScrollPaneAddon(JScrollPane, String, int, int, long, boolean) - Constructor for class pamScrollSystem.ScrollPaneAddon
 
scrollRangeChanged(AbstractPamScroller) - Method in class Map.SimpleMap
 
scrollRangeChanged(AbstractPamScroller) - Method in interface pamScrollSystem.PamScrollObserver
Notification sent when a scroller or slider changes it's data range
scrollRangeChanged(AbstractPamScroller) - Method in class pamScrollSystem.RangeSpinner
 
scrollStartMillis - Variable in class dataPlots.TDParameters
 
scrollToData(PamDataBlock) - Method in class dataMap.DataMapControl
 
scrollToData(PamDataBlock) - Method in class dataMap.ScrollingDataPanel
 
scrollValue - Variable in class radardisplay.RadarParameters
 
scrollValueChanged(AbstractPamScroller) - Method in class Map.SimpleMap
 
scrollValueChanged(AbstractPamScroller) - Method in interface pamScrollSystem.PamScrollObserver
Notification sent when a scroller or slider changes it's position
scrollValueChanged(AbstractPamScroller) - Method in class pamScrollSystem.RangeSpinner
 
searchForPeaks(PamObservable, FFTDataUnit) - Method in class whistleDetector.BetterPeakDetector
 
searchForPeaks(PamObservable, FFTDataUnit) - Method in class whistleDetector.PeakDetector
 
searchGPSDataBlock(long) - Method in class videoRangePanel.LocationManager
Deprecated.
searchHeadingTime - Static variable in class staticLocaliser.mapping.SLMapping
 
searchIMUDataBlock(IMUDataBlock, long, long) - Static method in class videoRangePanel.vrmethods.IMUMethod
Search the datablock for angle data.
secondColumnWidth - Variable in class likelihoodDetectionModule.ConfigurationDialogSettings
The second column width.
secondOrder - Variable in class difar.DifarParameters
 
secondsLimits - Variable in class likelihoodDetectionModule.GuardBand
The seconds' limits.
secondsLimits - Variable in class likelihoodDetectionModule.SignalBand
The seconds between detection's limits.
secondsToPreceed - Variable in class difar.DifarParameters
seconds to prepend to each clip to allow for signal locking of the demux algorithm
secondTimer(long) - Method in class clickDetector.ClickControl
 
secondTimer(long) - Method in class clickDetector.ClickDetector
 
sectionSamples - Variable in class clickDetector.RainbowFileSectionData
 
sectionStartTime - Variable in class clickDetector.RainbowFileSectionData
 
SEICHEEnable - Class in smlGainControl
 
SEICHEEnable() - Constructor for class smlGainControl.SEICHEEnable
 
seismicVeto - package seismicVeto
 
SEL_ALL_EVENTS - Static variable in class targetMotionModule.panels.EventControlPanel
 
SEL_ALL_EVENTS - Static variable in class targetMotionOld.dialog.EventControlPanel
 
SEL_CHANGED_EVENTS - Static variable in class targetMotionModule.panels.EventControlPanel
 
SEL_CHANGED_EVENTS - Static variable in class targetMotionOld.dialog.EventControlPanel
 
SEL_DETECTION_CHANGED - Static variable in class staticLocaliser.StaticLocaliserControl
The selected detection has changed.
SEL_DETECTION_CHANGED_BATCH - Static variable in class staticLocaliser.StaticLocaliserControl
The selected detection has changed in batch processing mode.
SEL_ONE_EVENT - Static variable in class targetMotionModule.panels.EventControlPanel
 
SEL_ONE_EVENT - Static variable in class targetMotionOld.dialog.EventControlPanel
 
selectBestResult(TargetMotionResult[]) - Method in class targetMotionModule.TargetMotionLocaliser
Work out which is the best result based on Chi2 and AIC.
selectBestResult(TargetMotionResult[]) - Method in class targetMotionOld.TargetMotionLocaliser
Work out which is the best result based on Chi2 and AIC.
selectCalibration(VRCalibrationData) - Method in class videoRangePanel.vrmethods.AbstractVRMethod
 
selectColourButton() - Method in class clickDetector.tdPlots.ClickHidingDialog
 
selectColourType(int) - Method in class clickDetector.tdPlots.ClickPlotInfo
 
selectData() - Method in class clickDetector.offlineFuncs.OfflineEventListPanel
Called when the show selection has changed.
selectDataLine(DataLineInfo) - Method in class clickDetector.tdPlots.ClickPlotInfo
 
selectDataLine(DataLineInfo) - Method in class dataPlots.data.TDDataInfo
Called when the user selects a specific data line
selectDataLine(TDDataInfo, DataLineInfo) - Method in class dataPlots.layout.TDGraph
Called when the user selects a specific data line for a specific data type.
selectDefault(boolean) - Method in class clickDetector.ClickAlarm
 
selectDialogClosed(boolean) - Method in class PamguardMVC.dataSelector.DataSelector
Not needed to retrieve parameters from the dialog panel.
selectDialogToOpen() - Method in class clickDetector.dataSelector.ClickDataSelector
 
selectDialogToOpen() - Method in class PamguardMVC.dataSelector.DataSelector
The DialogPanel will have a setParams, but may need to rebuild the actual dialog panel content at this point, e.g.
selectedBands - Variable in class noiseMonitor.alarm.NoiseAlarmParameters
 
selectedLocModels - Variable in class staticLocaliser.StaticLocaliserParams
Stores which algorithms are currently selected to localise.
selectedStats - Variable in class pamMaths.HistogramDisplay
 
selectEventIndex(int) - Method in class targetMotionOld.dialog.EventControlPanel
Called when the database index has been changed somewhere.
SelectFolder - Class in PamUtils
Makes a dialog panel for selecting a folder typically for file output.
SelectFolder(String, int, boolean) - Constructor for class PamUtils.SelectFolder
 
SelectFolder(String, int) - Constructor for class PamUtils.SelectFolder
 
SelectFolder(int) - Constructor for class PamUtils.SelectFolder
 
selectHeight(int) - Method in class videoRangePanel.VRControl
Set the current selected height
selectionType - Variable in class dataPlots.data.FoundDataUnit
 
selectItems(boolean) - Method in class PamView.MenuItemEnabler
Select all menu items in a MenuItemEnabler list
selectMapFile(File) - Method in class Map.GebcoMapFile
 
selectMapFile(File) - Method in interface Map.MapFileManager
 
selectProvider(TDDataProvider) - Method in interface dataPlots.data.TDInfoMonitor
Called when a data provider is selected in the central menu
selectSystem(int, boolean) - Method in class generalDatabase.DBControl
Select a database system
selectSystem(int, boolean) - Method in class generalDatabase.DBControlUnit
 
selIntegrationTime - Variable in class noiseOneBand.OneBandParameters
Interval for SEL integration.
send() - Method in class ipcomms.Producer
 
send(String) - Method in class portcomms.CommPortModem
Send to the port Send Car Return & Line Feed (\r\n), instead of using println( ).
sendChar(char) - Method in class portcomms.SerialPortParameters
 
sendDataString() - Method in class WILDInterface.WILDSidePanel.SidePanel
Send the data string, using the following parameters: bearing angle, distance, species ID, GPS latitude, GPS longitude, UTC date and UTC time.
sendDataUnit(PamDataBlock, PamDataUnit, long) - Method in class networkTransfer.emulator.EmulatorStream
 
sendDifarMessage(DIFARMessage) - Method in class difar.DifarControl
Called from just about anywhere in the DIFAR system, this will process various difar messages and then pass the notification on to all the difar displays.
senderSettings(Frame) - Method in class networkTransfer.send.NetworkSender
 
sendQueuedData() - Method in class networkTransfer.send.NetworkSender
Called from within the swing worker thread to send data from the queue.
sendSerialString(String) - Method in class nmeaEmulator.SerialOutput
 
sendString(String) - Method in class portcomms.SerialPortParameters
 
SequentialTrainingSelector - Class in whistleClassifier.training
Selects groups of fragments into training / test groups simply by concatenating all the files together from some random start point.
SequentialTrainingSelector() - Constructor for class whistleClassifier.training.SequentialTrainingSelector
 
serialComms - package serialComms
 
SerialDatabasseLoggging - Class in serialPortLogger
 
SerialDatabasseLoggging(SerialLogger, PamDataBlock) - Constructor for class serialPortLogger.SerialDatabasseLoggging
 
SerialDataBlock - Class in serialPortLogger
 
SerialDataBlock(String, PamProcess) - Constructor for class serialPortLogger.SerialDataBlock
 
SerialDataProcess - Class in serialPortLogger
 
SerialDataProcess(SerialLogger) - Constructor for class serialPortLogger.SerialDataProcess
 
SerialDataUnit - Class in serialPortLogger
 
SerialDataUnit(long, String) - Constructor for class serialPortLogger.SerialDataUnit
 
SerialDisplayProvider - Class in serialPortLogger
 
SerialDisplayProvider(SerialLogger) - Constructor for class serialPortLogger.SerialDisplayProvider
 
SerialDisplayTable - Class in serialPortLogger
 
SerialDisplayTable(SerialLogger) - Constructor for class serialPortLogger.SerialDisplayTable
 
serialEvent(SerialPortEvent) - Method in class serialComms.SerialPortCom
 
serialEvent(SerialPortEvent) - Method in class smlPingerControl.PingerSerialPort
 
SerialLogger - Class in serialPortLogger
Simple module to store adn dump serial data to the database.
SerialLogger(String) - Constructor for class serialPortLogger.SerialLogger
 
SerialLoggerDialog - Class in serialPortLogger
 
SerialLoggerParams - Class in serialPortLogger
 
SerialLoggerParams() - Constructor for class serialPortLogger.SerialLoggerParams
 
SerialLoggerSidePanel - Class in serialPortLogger
 
SerialLoggerSidePanel(SerialLogger) - Constructor for class serialPortLogger.SerialLoggerSidePanel
 
SerialOutput - Class in nmeaEmulator
 
SerialOutput(String) - Constructor for class nmeaEmulator.SerialOutput
 
SerialOutputdialog - Class in nmeaEmulator
 
SerialOutputdialog() - Constructor for class nmeaEmulator.SerialOutputdialog
 
SERIALPORT_OPEN_TIMEOUTSECONDS - Static variable in class portcomms.OpenCommPort
 
serialPortBitsPerSecond - Variable in class NMEA.NMEAParameters
 
serialPortBitsPerSecond - Variable in class smlPingerControl.SMLPingerParams
 
SerialPortCom - Class in serialComms
 
SerialPortCom(String, int, CommPortIdentifier, String) - Constructor for class serialComms.SerialPortCom
 
serialPortLogger - package serialPortLogger
 
serialPortName - Variable in class NMEA.NMEAParameters
 
serialPortName - Variable in class smlPingerControl.SMLPingerParams
 
SerialPortPanel - Class in serialComms
Standard panel for entering serial port settings.
SerialPortPanel() - Constructor for class serialComms.SerialPortPanel
 
SerialPortPanel(String) - Constructor for class serialComms.SerialPortPanel
 
SerialPortPanel(String, boolean, boolean, boolean, boolean, boolean) - Constructor for class serialComms.SerialPortPanel
 
SerialPortParameters - Class in portcomms
 
SerialPortParameters() - Constructor for class portcomms.SerialPortParameters
 
SerialTextField - Class in nmeaEmulator
 
SerialTextField() - Constructor for class nmeaEmulator.SerialTextField
 
SerialTextField(Document, String, int) - Constructor for class nmeaEmulator.SerialTextField
 
SerialTextField(int) - Constructor for class nmeaEmulator.SerialTextField
 
SerialTextField(String, int) - Constructor for class nmeaEmulator.SerialTextField
 
SerialTextField(String) - Constructor for class nmeaEmulator.SerialTextField
 
serialValue - Variable in enum NMEA.NMEAParameters.NmeaSources
 
serialVersionUID - Static variable in class Acquisition.FileInputParameters
 
serialVersionUID - Static variable in class Acquisition.FolderInputParameters
 
serialVersionUID - Static variable in class Acquisition.offlineFuncs.OfflineFileParameters
 
serialVersionUID - Static variable in class Acquisition.SoundCardParameters
 
serialVersionUID - Static variable in class AirgunDisplay.AirgunParameters
 
serialVersionUID - Static variable in class AIS.AISParameters
 
serialVersionUID - Static variable in class AIS.AISPositionReport
 
serialVersionUID - Static variable in class AIS.AISReport
 
serialVersionUID - Static variable in class AIS.AISStaticData
 
serialVersionUID - Static variable in class alarm.actions.serial.AlarmSerialSettings
 
serialVersionUID - Static variable in class alarm.actions.sound.PlaySoundParams
 
serialVersionUID - Static variable in class alarm.AlarmParameters
 
serialVersionUID - Static variable in class amplifier.AmpParameters
 
serialVersionUID - Static variable in class angleMeasurement.AngleLoggingParameters
 
serialVersionUID - Static variable in class angleMeasurement.AngleParameters
 
serialVersionUID - Static variable in class angleMeasurement.FluxgateWorldParameters
 
serialVersionUID - Static variable in class angleVetoes.AngleVetoParameters
 
serialVersionUID - Static variable in class Array.Hydrophone
 
serialVersionUID - Static variable in class Array.PamArray
 
serialVersionUID - Static variable in class Array.Preamplifier
 
serialVersionUID - Static variable in class Array.Streamer
 
serialVersionUID - Static variable in class Array.streamerOrigin.OriginSettings
 
serialVersionUID - Static variable in class ArrayAccelerometer.ArrayAccelParams
 
serialVersionUID - Static variable in class beakedWhaleProtocol.BeakedExperimentData
 
serialVersionUID - Static variable in class beakedWhaleProtocol.BeakedParameters
 
serialVersionUID - Static variable in class binaryFileStorage.BinaryStoreSettings
 
serialVersionUID - Static variable in class classifier.WekaClassifierParams
 
serialVersionUID - Static variable in class clickDetector.alarm.ClickAlarmParameters
 
serialVersionUID - Static variable in class clickDetector.BasicClickIdParameters
 
serialVersionUID - Static variable in class clickDetector.BTDisplayParameters
 
serialVersionUID - Static variable in class clickDetector.ClickAlarm
for serialization
serialVersionUID - Static variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierParameters
 
serialVersionUID - Static variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
serialVersionUID - Static variable in class clickDetector.ClickDisplayManagerParameters
 
serialVersionUID - Static variable in class clickDetector.ClickDisplayManagerParameters2
 
serialVersionUID - Static variable in class clickDetector.ClickParameters
 
serialVersionUID - Static variable in class clickDetector.ClickSpectrumParams
 
serialVersionUID - Static variable in class clickDetector.ClickTypeParams
 
serialVersionUID - Static variable in class clickDetector.echoDetection.JamieEchoParams
 
serialVersionUID - Static variable in class clickDetector.echoDetection.SimpleEchoParams
 
serialVersionUID - Static variable in class clickDetector.IDI_DisplayParams
for serialization
serialVersionUID - Static variable in class clickDetector.offlineFuncs.OfflineParameters
 
serialVersionUID - Static variable in class clickDetector.WignerPlotOptions
 
serialVersionUID - Static variable in class clipgenerator.clipDisplay.ClipDisplayParameters
 
serialVersionUID - Static variable in class clipgenerator.ClipGenSetting
 
serialVersionUID - Static variable in class clipgenerator.ClipSettings
 
serialVersionUID - Static variable in class cpod.CPODParams
 
serialVersionUID - Static variable in class dataGram.DatagramSettings
 
serialVersionUID - Static variable in class dataPlots.layout.DataListInfo
 
serialVersionUID - Static variable in class dataPlots.layout.GraphParameters
 
serialVersionUID - Static variable in class dataPlots.TDParameters
 
serialVersionUID - Static variable in class dbht.alarm.DbHtAlarmParameters
 
serialVersionUID - Static variable in class dbht.DbHtDisplayParams
 
serialVersionUID - Static variable in class dbht.DbHtParameters
 
serialVersionUID - Static variable in class dbht.offline.DbHtSummaryParams
 
serialVersionUID - Static variable in class decimator.DecimatorParams
 
serialVersionUID - Static variable in class decimus.summarystring.DStrModuleInfo
 
serialVersionUID - Static variable in class decimus.summarystring.DStrModulePartInfo
 
serialVersionUID - Static variable in class decimus.summarystring.DStrParameters
 
serialVersionUID - Static variable in class depthReadout.DepthParameters
 
serialVersionUID - Static variable in class depthReadout.MccDepthParameters.MccSensorParameters
 
serialVersionUID - Static variable in class depthReadout.MccDepthParameters
 
serialVersionUID - Static variable in class difar.dataSelector.DifarSelectParameters
 
serialVersionUID - Static variable in class difar.demux.GreenridgeParams
About three things to do here ...
serialVersionUID - Static variable in class difar.DifarParameters.DifarTriggerParams
 
serialVersionUID - Static variable in class difar.DifarParameters
 
serialVersionUID - Static variable in class envelopeTracer.EnvelopeParams
 
serialVersionUID - Static variable in class fftFilter.FFTFilterParams
 
serialVersionUID - Static variable in class fftManager.Complex
 
serialVersionUID - Static variable in class fftManager.FFTParameters
 
serialVersionUID - Static variable in class fileOfflineData.OfflineFileParams
 
serialVersionUID - Static variable in class Filters.FilterParameters_2
 
serialVersionUID - Static variable in class Filters.FilterParams
 
serialVersionUID - Static variable in class generalDatabase.dataExport.ValueFilterParams
 
serialVersionUID - Static variable in class generalDatabase.DBParameters
 
serialVersionUID - Static variable in class generalDatabase.lookupTables.LookupItem
 
serialVersionUID - Static variable in class generalDatabase.lookupTables.LookupList
 
serialVersionUID - Static variable in class generalDatabase.MySQLParameters
 
serialVersionUID - Static variable in class GPS.GPSParameters
 
serialVersionUID - Static variable in class hfDaqCard.SmruDaqParameters
 
serialVersionUID - Static variable in class IshmaelDetector.EnergySumParams
 
serialVersionUID - Static variable in class IshmaelDetector.EnergySumParamsDialog
 
serialVersionUID - Static variable in class IshmaelDetector.IshDetParams
 
serialVersionUID - Static variable in class IshmaelDetector.MatchFiltParams
 
serialVersionUID - Static variable in class IshmaelDetector.MatchFiltParamsDialog
 
serialVersionUID - Static variable in class IshmaelDetector.SgramCorrParams
 
serialVersionUID - Static variable in class IshmaelDetector.SgramCorrParamsDialog
 
serialVersionUID - Static variable in class IshmaelLocator.IshLocHyperbParams
 
serialVersionUID - Static variable in class IshmaelLocator.IshLocHyperbParamsDialog
 
serialVersionUID - Static variable in class IshmaelLocator.IshLocParams
 
serialVersionUID - Static variable in class KernelSmoothing.KernelSmoothingParameters
 
serialVersionUID - Static variable in class landMarks.LandmarkData
 
serialVersionUID - Static variable in class landMarks.LandmarkDatas
 
serialVersionUID - Static variable in class levelMeter.LevelMeterParams
 
serialVersionUID - Static variable in class listening.ListeningParameters
 
serialVersionUID - Static variable in class Localiser.DelayMeasurementParams
 
serialVersionUID - Static variable in class Localiser.timeDelayLocalisers.MCMCParams
 
serialVersionUID - Static variable in class Localiser.timeDelayLocalisers.MCMCParamsHM
 
serialVersionUID - Static variable in class loggerForms.FormPlotOptions
 
serialVersionUID - Static variable in class loggerForms.FormSettings
 
serialVersionUID - Static variable in class ltsa.LtsaParameters
 
serialVersionUID - Static variable in class Map.MapDetectionData
 
serialVersionUID - Static variable in class Map.MapDetectionsParameters
 
serialVersionUID - Static variable in class networkTransfer.emulator.EmulatorParams
 
serialVersionUID - Static variable in class networkTransfer.receive.NetworkHydrophoneLocator
Deprecated.
 
serialVersionUID - Static variable in class networkTransfer.receive.NetworkReceiveParams
 
serialVersionUID - Static variable in class networkTransfer.send.NetworkSendParams
 
serialVersionUID - Static variable in class nidaqdev.NIDaqParams
 
serialVersionUID - Static variable in class NMEA.NMEABitArray
 
serialVersionUID - Static variable in class NMEA.NMEAParameters
 
serialVersionUID - Static variable in class nmeaEmulator.NMEAEmulatorParams
 
serialVersionUID - Static variable in class noiseBandMonitor.NoiseBandSettings
 
serialVersionUID - Static variable in class noiseMonitor.alarm.NoiseAlarmParameters
 
serialVersionUID - Static variable in class noiseMonitor.NoiseDisplaySettings
 
serialVersionUID - Static variable in class noiseMonitor.NoiseMeasurementBand
 
serialVersionUID - Static variable in class noiseMonitor.NoiseSettings
 
serialVersionUID - Static variable in class noiseOneBand.offline.OneBandSummaryParams
 
serialVersionUID - Static variable in class noiseOneBand.OneBandAlarmParameters
 
serialVersionUID - Static variable in class noiseOneBand.OneBandDisplayParams
 
serialVersionUID - Static variable in class noiseOneBand.OneBandParameters
 
serialVersionUID - Static variable in class offlineProcessing.TaskGroupParams
 
serialVersionUID - Static variable in class PamController.StorageParameters
 
serialVersionUID - Static variable in class PamController.UsedModuleInfo
 
serialVersionUID - Static variable in class PamDetection.IshDetection
 
serialVersionUID - Static variable in class pamMaths.PamQuaternion
Determines if a de-serialized object is compatible with this class.
serialVersionUID - Static variable in class PamModel.PamModelSettings
 
serialVersionUID - Static variable in class pamScrollSystem.StoredScrollerData
 
serialVersionUID - Static variable in class PamView.ColorSettings
 
serialVersionUID - Static variable in class PamView.CornerLayoutContraint
 
serialVersionUID - Static variable in class PamView.GroupedSourceParameters
 
serialVersionUID - Static variable in class PamView.PamDialog
 
serialVersionUID - Static variable in class PamView.PamSymbol
 
serialVersionUID - Static variable in class patchPanel.PatchPanelParameters
 
serialVersionUID - Static variable in class radardisplay.RadarParameters
 
serialVersionUID - Static variable in class RightWhaleEdgeDetector.RWEParameters
 
serialVersionUID - Static variable in class rocca.RoccaParameters
for serialization
serialVersionUID - Static variable in class seismicVeto.VetoParameters
 
serialVersionUID - Static variable in class serialPortLogger.SerialLoggerParams
 
serialVersionUID - Static variable in class simulatedAcquisition.movement.GridMovementParams
 
serialVersionUID - Static variable in class simulatedAcquisition.SimParameters
 
serialVersionUID - Static variable in class smlGainControl.SMLGainParameters
 
serialVersionUID - Static variable in class smlPingerControl.SMLPingerParams
 
serialVersionUID - Static variable in class soundPlayback.PlaybackParameters
 
serialVersionUID - Static variable in class SoundRecorder.RecorderSettings
 
serialVersionUID - Static variable in class SoundRecorder.trigger.RecorderTriggerData
 
serialVersionUID - Static variable in class spectrogramNoiseReduction.averageSubtraction.AverageSubtractionParameters
 
serialVersionUID - Static variable in class spectrogramNoiseReduction.medianFilter.MedianFilterParams
 
serialVersionUID - Static variable in class spectrogramNoiseReduction.SpectrogramNoiseSettings
 
serialVersionUID - Static variable in class spectrogramNoiseReduction.threshold.ThresholdParams
 
serialVersionUID - Static variable in class staticLocaliser.ClickControlParams
 
serialVersionUID - Static variable in class staticLocaliser.panels.HyperbolicLocParams
 
serialVersionUID - Static variable in class staticLocaliser.StaticLocaliserParams
 
serialVersionUID - Static variable in class userDisplay.DisplayProviderParameters
 
serialVersionUID - Static variable in class userDisplay.UserDisplayParameters
 
serialVersionUID - Static variable in class videoRangePanel.RefractionParameters
 
serialVersionUID - Static variable in class videoRangePanel.VRCalibrationData
 
serialVersionUID - Static variable in class videoRangePanel.VRHeightData
 
serialVersionUID - Static variable in class videoRangePanel.VRParameters
 
serialVersionUID - Static variable in class whistleClassifier.FragmentClassifierParams
 
serialVersionUID - Static variable in class whistleClassifier.training.BatchTrainingParams
 
serialVersionUID - Static variable in class whistleClassifier.training.TrainingContour
 
serialVersionUID - Static variable in class whistleClassifier.training.TrainingDataSet
 
serialVersionUID - Static variable in class whistleClassifier.TrainingContour
 
serialVersionUID - Static variable in class whistleClassifier.TrainingDataSet
 
serialVersionUID - Static variable in class whistleClassifier.WhistleClassificationParameters
 
serialVersionUID - Static variable in class whistlesAndMoans.alarm.WMAlarmParameters
 
serialVersionUID - Static variable in class whistlesAndMoans.WhistleToneParameters
 
serialVersionUID - Static variable in class WILDInterface.WILDParameters
 
serialVersionUID - Static variable in class zipUnpacker.ZipSettings
 
set(StreamerDataUnit) - Method in class Array.streamerOrigin.GPSOriginIterator
 
set(StreamerDataUnit) - Method in class Array.streamerOrigin.StreamerDataIterator
 
set(E) - Method in class PamguardMVC.ChannelIterator
 
set(Tunit) - Method in class PamguardMVC.ReverseChannelIterator
 
SET_FILENAME - Static variable in class offlineProcessing.TaskMonitorData
 
SET_NFILES - Static variable in class offlineProcessing.TaskMonitorData
 
SET_PROGRESS - Static variable in class offlineProcessing.TaskMonitorData
 
SET_STATUS - Static variable in class offlineProcessing.TaskMonitorData
 
setAbsBlockIndex(int) - Method in class PamguardMVC.PamDataUnit
 
setAccelParams(ArrayAccelParams) - Method in class ArrayAccelerometer.ArrayAccelControl
 
setAcceptFolders(boolean) - Method in class PamUtils.PamFileFilter
 
setAcquisitionSettings(AcquisitionSettings) - Method in class likelihoodDetectionModule.LikelihoodDetectionParameters
Sets the acquisition settings were used to create the TargetConfigurations, but does NOT force a error-checking synchronization the way syncWithAcquisitionSettings() does.
setAcquisitionSettings(AcquisitionSettings) - Method in class likelihoodDetectionModule.TreeTableModel
 
setActive(boolean) - Method in class alarm.AlarmDataUnit
 
setActive(boolean) - Method in class clickDetector.ClickClassifiers.basic.BasicIdentifierPanel
 
setActive(boolean) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierPanel
 
setActive(boolean) - Method in interface clickDetector.ClickClassifiers.ClassifyDialogPanel
 
setActiveControlledUnit(PamControlledUnit) - Method in class PamView.TopToolBar
Only display component from the pam controlled unit which is currently on view.
setActiveEdge(int) - Method in class nidaqdev.Nidaq.DAQmxCfgSampClkTimingParams
 
setAic(Double) - Method in class staticLocaliser.SLResult
 
setAic(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setAic(Double) - Method in class targetMotionModule.TargetMotionResult
 
setAic(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setAic(Double) - Method in class targetMotionOld.TargetMotionResult
 
setAIRange(int, double[]) - Method in class nidaqdev.NIDaqParams
 
setAlarm(int, Boolean) - Method in class clickDetector.ClickClassifiers.basic.BasicIdentifierPanel
 
setAlarm(int, Boolean) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierPanel
 
setAlarm(ClickAlarm) - Method in class clickDetector.ClickClassifiers.ClickTypeCommonParams
Sets the alarm used for this click type.
setAlarm(int, Boolean) - Method in class clickDetector.ClickClassifiers.UserTypesPanel
 
setAlarmEnabled(Boolean) - Method in class clickDetector.ClickClassifiers.ClickTypeCommonParams
 
setAlarmStatus(int, double, long) - Method in class alarm.AlarmDataUnit
Sets the alarm state and records the start and end times for each of those states.
setAlarmStatus(int, double, long) - Method in class alarm.AlarmProcess
 
setAlgorithm(NormalizerProcess.NormalizerAlgorithm) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the algorithm.
setAlgorithm(AbstractSLAlgorithm) - Method in class staticLocaliser.SLResult
 
setAlgorithmName(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setAllowEdits(boolean) - Method in class generalDatabase.lookupTables.LookupComponent
 
setAllowNullSelection(boolean) - Method in class generalDatabase.lookupTables.LookupComponent
 
setAllowScaleMultiples(boolean) - Method in class Layout.PamAxis
 
setAmbiguity(int) - Method in class staticLocaliser.SLResult
 
setAmbiguity(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setAmplitude(int, double) - Method in class clickDetector.ClickDetection
Set the amplitude for a given channel
setAmplitude(int, double) - Method in class clickDetector.OldClickClass
 
setAmplitudeAbsoluteRange(double, double) - Method in class Spectrogram.SpectrogramHidingPanel
 
setAmplitudeParams() - Method in class Spectrogram.SpectrogramDisplay
Called when amplitude range is changed on the hiding amplitude range slider.
setAmplitudeSliderRange(double, double, double, double) - Method in class Spectrogram.SpectrogramHidingPanel
Set the slider amplitude range
setAnalEndTime(long) - Method in class PamController.PamViewParameters
 
setAnalStartTime(long) - Method in class PamController.PamViewParameters
 
setAnalysisDate(long) - Method in class binaryFileStorage.BinaryFooter
 
setAnalysisDate(long) - Method in class binaryFileStorage.BinaryHeader
 
setAnchor(IshDetWrapper) - Method in class PamDetection.IshAnchorGroup
 
setAngle(double, int) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setAngle(double, int) - Method in class PamDetection.PamLocalisation
Deprecated.
 
setAngle(double) - Method in class videoRangePanel.importTideData.TideDataUnit
 
setAngleErrors(double[]) - Method in class clickDetector.ClickLocalisation
 
setAngleLoggingParameters(AngleLoggingParameters) - Method in class angleMeasurement.AngleParameters
 
setAngleOffset(double) - Method in class angleMeasurement.AngleMeasurement
 
setAngleParameters(AngleParameters) - Method in class angleMeasurement.AngleMeasurement
 
setAngles(double[]) - Method in class clickDetector.ClickLocalisation
 
setAngles(double[]) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setAnglesAndErrors(double[][]) - Method in class clickDetector.ClickLocalisation
 
setAngleScales(boolean) - Method in class Layout.PamAxis
Easy way to make scales end at 45, 90, 180, etc and step in sensible 45, 90, etc.
setAngleVetoParameters(AngleVetoParameters) - Method in class angleVetoes.AngleVetoes
set angle veto parameters
setAnimalBearing(Double, Double) - Method in class videoRangePanel.vrmethods.ImageRotRibbonPanel
 
setAnimalDistance(Double, Double) - Method in class videoRangePanel.vrmethods.ImageRotRibbonPanel
 
setArbFilterShape(double[], double[]) - Method in class Filters.FilterParams
 
setArchiveFolder(String) - Method in class zipUnpacker.ZipSettings
 
setArrayAxis(PamVector[]) - Method in class PamDetection.AbstractLocalisation
Set the array axis - one, two or three axes defining the principle orientations of the array used for the localisation.
setArrayFile(String) - Method in class Array.PamArray
 
setArrayName(String) - Method in class Array.PamArray
 
setArrayShape(int) - Method in class Array.PamArray
 
setArraySizeInSamps(int) - Method in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
setAsioControlPanelValid(boolean) - Method in class asiojni.AsioJniInterface.AsioDriverSettings
 
setAspectRatio() - Method in class clickDetector.ConcatenatedSpectrogram
 
setAspectRatio() - Method in class PamGraph3D.PamPanel3D
Set the aspect ratio of the graph to match the containing window aspect ratio.
setAspectRatioEnabled(boolean) - Method in class PamGraph3D.PamPanel3D
Enable ore disable 3D scaling with window aspect ratio
setAspectRatioPolicy(boolean) - Method in class PamGraph3D.MouseGetVirtualLocation
 
setAttributes(RoccaContourDataBlock) - Method in class rocca.RoccaClassifier
Sets up the available datablock fields to match the classifier model
setAttributes(RoccaContourDataBlock, Instances) - Method in class rocca.RoccaClassifier
Sets up the available datablock fields to match the classifier model
setAudioFileFilter(PamFileFilter) - Method in class Acquisition.FolderInputSystem
 
setAutoFormat(boolean) - Method in class Layout.PamAxis
Automatically set the format of axis labels based on the types of numbers in there.
setAutoGrouping(boolean) - Method in class PamView.GroupedSourcePanel
 
setAutoHide(boolean) - Method in class PamView.hidingpanel.HidingDialogPanel
Should the dialog automatically disappear when the mouse moves off it ?
setAutoHideTime(int) - Method in class PamView.hidingpanel.HidingDialogPanel
The time to wait before hiding the dialog after the mouse has moved off of it
setAutoInsets(Graphics) - Method in class Layout.PamAxisPanel
Work out how much space is required around the central plot for axis.
setAutoInsets(boolean) - Method in class Layout.PamAxisPanel
 
setAutosaveFreq(int) - Method in class rocca.RoccaSidePanel
Note: this method changes the field, but does not update the timer.
setAutoSaveTimer(DifarProcess.AutoSaveTimer) - Method in class difar.DifarProcess
 
setAutoShow(boolean) - Method in class PamView.hidingpanel.HidingDialogPanel
Set to auto show the dialog as soon as the mouse moves over the showButton
setAutoUpdate(Integer) - Method in class loggerForms.ItemDescription
 
setAxis(PamAxis) - Method in class dataMap.DataStreamPanel
Need to know the axis since the axis can easily calculate a value based on the coordinate of the cursor for the tooltips.
setAxisLabels(int[]) - Method in class Localiser.timeDelayLocalisers.LikelihoodSurface
Set the correct axis labels for the dimensions.
setAxisName(String) - Method in class dataPlots.layout.TDGraph
Called when the user sets the type of axis units.
setAxisPanel(Component) - Method in class Layout.PamFramePlots
 
setAxisVisTransform() - Method in class PamGraph3D.PamPanel3D
 
setBackground(Color) - Method in class clickDetector.ClickSidePanel.SidePanel
 
setBackground(Color) - Method in class likelihoodDetectionModule.CheckRenderer
 
setBackground(Color) - Method in class likelihoodDetectionModule.CheckRenderer.TreeLabel
 
setBackground(Color) - Method in class loggerForms.controls.LoggerFormLabel
 
setBackground(Color) - Method in class loggerForms.LoggerFormPanel
 
setBackground(Color) - Method in class Map.MapPanel
 
setBackground(Color) - Method in class Map.MouseMeasureDisplay
 
setBackground(Color) - Method in class PamGraph3D.PamPanel3D
 
setBackground(Color) - Method in class PamView.PamButton
 
setBackground(Color) - Method in class PamView.PamButtonAlpha
 
setBackground(Color) - Method in class PamView.PamCheckBox
 
setBackground(Color) - Method in class PamView.PamLabel
 
setBackground(Color) - Method in class PamView.PamPanel
 
setBackground(Color) - Method in class PamView.PamRadioButton
 
setBackground(Color) - Method in class PamView.PamTabbedPane
 
setBackground(Color) - Method in class PamView.PamTable
 
setBackground(Color) - Method in class PamView.PamTextArea
 
setBackground(Color) - Method in class PamView.PamTextDisplay
 
setBackground(Color) - Method in class rocca.RoccaSidePanel.SidePanel
 
setBackground(double) - Method in class seismicVeto.VetoBackgroundDataUnit
 
setBackground(Color) - Method in class SoundRecorder.RecorderButton
 
setBackground(Color) - Method in class WILDInterface.WILDSidePanel.SidePanel
 
setBackground(double) - Method in class WorkshopDemo.BackgroundDataUnit
 
setBandHiEdges(double[]) - Method in class noiseMonitor.NoiseDataBlock
 
setBandLoEdges(double[]) - Method in class noiseMonitor.NoiseDataBlock
 
setBandLongNames(String[]) - Method in class noiseMonitor.NoiseDataBlock
 
setBandNames(String[]) - Method in class noiseMonitor.NoiseDataBlock
 
setBandPerformances(NoiseBandSettings, BandPerformance[]) - Method in class noiseBandMonitor.FilterPropertyTable
 
setBandwidth(double[]) - Method in class Array.Preamplifier
 
setBatchTrainingProgress(int, BatchTrainingProgress) - Method in class whistleClassifier.training.BatchTrainingDialog
 
setBatchTrainingProgress(int, BatchTrainingProgress) - Method in interface whistleClassifier.training.BatchTrainingMonitor
 
setBattVolts(Double) - Method in class networkTransfer.receive.BuoyStatusDataUnit
 
setBaud(int) - Method in class WILDInterface.WILDParameters
 
setBaudRate(int) - Method in class serialComms.SerialPortPanel
 
setBAutoScroll(boolean) - Method in class clickDetector.ClickDisplayManager
 
setBeakedLocationData(BeakedLocationData) - Method in class beakedWhaleProtocol.BeakedDataUnit
 
setBeamLatitude(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setBeamLatLong(GpsData) - Method in class targetMotionModule.TargetMotionResult
 
setBeamLatLong(LatLong) - Method in class targetMotionOld.TargetMotionResult
 
setBeamLongitude(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setBeamTime(Long) - Method in class targetMotionModule.TargetMotionResult
 
setBeamTime(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setBeamTime(Long) - Method in class targetMotionOld.TargetMotionResult
 
setBearing(int, double) - Method in class Localiser.bearingLocaliser.GroupDetection
 
setBearing(Double) - Method in class videoRangePanel.LandMark
 
setBestNumber(Short) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setBestResultIndex(int) - Method in class staticLocaliser.StaticLocalise
Set the index of the best result in an index of 1D results
setBestResultIndex(int) - Method in class targetMotionModule.TargetMotionLocaliser
 
setBestResultIndex(int) - Method in class targetMotionOld.TargetMotionLocaliser
 
setBinaryDataSource(BinaryDataSource) - Method in class offlineProcessing.DataCopyTask
 
setBinaryDataSource(BinaryDataSource) - Method in class PamguardMVC.PamDataBlock
 
setBinaryStorageStream(BinaryOutputStream) - Method in class binaryFileStorage.BinaryDataSource
 
setBinaryStoreSettings(BinaryStoreSettings) - Method in class binaryFileStorage.BinaryStore
 
setBinCentres(boolean) - Method in class pamMaths.PamHistogram
 
setBit(int, boolean) - Method in class PamUtils.Ascii6Bit
 
SetBit(int, int, int) - Static method in class PamUtils.PamUtils
 
SetBit(int, int, boolean) - Static method in class PamUtils.PamUtils
 
setBitsPerSecond(int) - Method in class portcomms.SerialPortParameters
 
setBlockIncrement(long) - Method in class pamScrollSystem.AbstractPamScroller
 
setBlockIncrement(long) - Method in class pamScrollSystem.PamScroller
 
setBlockOptions() - Method in class PamController.StorageOptions
Set the options in available data blocks.
setBorder(Border) - Method in class PamView.PamBorderPanel
 
setBorderColour(Color) - Method in class generalDatabase.lookupTables.LookupItem
 
setBorderInsets() - Method in class dataPlots.layout.TDAxes
 
SetBorderMins(int, int, int, int) - Method in class Layout.PamAxisPanel
 
setBounds(int, int, int, int) - Method in class likelihoodDetectionModule.TreeTable.TreeTableCellRenderer
This is overridden to set the height to match that of the JTable.
setBufferedClipRectangle(int, int, int, int, boolean) - Method in class PamView.ScrollableBufferedImage
 
setBufferedClipRectangle(Rectangle, boolean) - Method in class PamView.ScrollableBufferedImage
 
setButtonStates(int) - Method in class SoundRecorder.RecorderSidePanel
 
setButtonStates(int) - Method in class SoundRecorder.RecorderTabPanel
 
setButtonStates(int) - Method in interface SoundRecorder.RecorderView
 
setBw(short) - Method in class cpod.CPODClick
 
setByteData(byte[]) - Method in class PamUtils.Ascii6Bit
 
setCalculatedAmlitudeDB(double) - Method in class PamDetection.AcousticDataUnit
 
setCalibrationData(double[]) - Method in class angleMeasurement.AngleMeasurement
 
setCalibrationData(double[]) - Method in class angleMeasurement.AngleParameters
 
setCalibrationDatas(ArrayList<VRCalibrationData>) - Method in class videoRangePanel.VRParameters
 
setCalibrationInterval(int) - Method in class angleMeasurement.AngleParameters
 
setCallBacksPerSecond(int) - Method in class nidaqdev.Nidaq
Set the number of times that NI calls the EveryNCallbacks function to read from the internal buffers and send data through to the JAva side.
setCallType(String) - Method in class PamDetection.IshDetection
 
setCalPitch(Double) - Method in class angleMeasurement.AngleDataUnit
 
setCalTilt(Double) - Method in class angleMeasurement.AngleDataUnit
 
setCalTrueHeading(Double) - Method in class angleMeasurement.AngleDataUnit
 
setCancelObserver(CancelObserver) - Method in class PamView.PamDialog
 
setCanClipGenerate(boolean) - Method in class PamguardMVC.PamDataBlock
 
setCanEdit(boolean) - Method in class noiseMonitor.NoiseMeasurementBand
 
setCanMultiThread(boolean) - Method in class PamguardMVC.PamProcess
 
setCanRemove(boolean) - Method in class noiseMonitor.NoiseMeasurementBand
 
setCanvas3D(Canvas3D) - Method in class PamGraph3D.MouseGetVirtualLocation
 
setCanView(boolean) - Method in class generalDatabase.SQLLogging
 
setCentreFreq(double) - Method in class Filters.FilterParams
 
setChainJumps(ArrayList<ArrayList<Point3f>>) - Method in class Localiser.timeDelayLocalisers.MCMCTDResults
 
setChanged() - Method in class PamguardMVC.PamObservable
Set flag to say the data have changed
setChannel(int) - Method in class Spectrogram.SpectrogramProjector
 
setChannelBitmap(int) - Method in class clickDetector.ClickDetection
 
setChannelBitmap(int) - Method in class PamguardMVC.PamDataUnit
 
setChannelBitmap(int) - Method in class PamView.GroupedSourceParameters
 
setChannelBitmap(int) - Method in class SoundRecorder.RecorderSettings
 
setChannelBitmap(int, boolean) - Method in class SoundRecorder.RecorderSettings
Set the bitmap for a given channel.
setChannelClusters(ArrayList<ArrayList<int[]>>) - Method in class staticLocaliser.StaticLocaliserParams
 
setChannelGroups(int[]) - Method in class PamView.GroupedSourcePanel
 
setChannelGroups(int[]) - Method in class PamView.GroupedSourceParameters
 
setChannelList(int[]) - Method in class Acquisition.AcquisitionParameters
 
setChannelList(int, int) - Method in class Acquisition.AcquisitionParameters
 
setChannelList(int) - Method in class PamView.SourcePanel
Set the current channel selection
setChannelListIndexes(int[]) - Method in class Acquisition.AcquisitionParameters
Sets the channel list indeces
setChannelMap(int) - Method in class eventCounter.DataCounter
 
setChannelMap(int) - Method in class PamguardMVC.PamDataBlock
 
setChannelMap(int) - Method in class rocca.RoccaParameters
 
setChannelMask(int, int) - Method in class hfDaqCard.SmruDaqJNI
 
setChannelRunning(int, boolean) - Method in class Acquisition.RonaInputSystem
 
setChannels(int) - Method in class Acquisition.AcquisitionDialog
Called by the specific DaqSystem to set the number of channels when it is set by the DaqSystem (for instance FileInputSystem will set it to the number of channels in the current file.
setChannels(int) - Method in class angleVetoes.AngleVeto
 
setCharData(StringBuffer) - Method in class NMEA.NMEADataUnit
Set teh full NMEA character string.
setChargeCurrent(Double) - Method in class networkTransfer.receive.BuoyStatusDataUnit
 
setCheckedConnection(Connection) - Method in class generalDatabase.PamTableDefinition
 
setChi(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setChi2(double) - Method in class staticLocaliser.SLResult
 
setChi2(double) - Method in class targetMotionModule.TargetMotionResult
 
setChi2(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setChi2(double) - Method in class targetMotionOld.TargetMotionResult
 
setClassificationThreshold(int) - Method in class rocca.RoccaParameters
 
setClassifiedAs(String) - Method in class rocca.RoccaContourDataBlock
 
setClassifiedSpecies(String) - Method in class rocca.RoccaLoggingDataUnit
 
setClassifier(AbstractClassifier) - Method in class classifier.WekaClassifierParams
 
setClassifier2Used(String) - Method in class rocca.RoccaLoggingDataUnit
 
setClassifierClass(Class) - Method in class classifier.ClassifierParams
 
setClassifierLoaded(boolean) - Method in class rocca.RoccaProcess
Sets the classifier loaded flag
setClassifierManager(ClickClassifierManager) - Method in class clickDetector.ClickControl
 
setClassifierParams(ClassifierParams) - Method in class classifier.AbstractWekaClassifier
 
setClassifierParams(ClassifierParams) - Method in class classifier.Classifier
Will be called to load stored parameters into a classifier.
setClassifierParams(ClassifierParams) - Method in class classifier.LinearClassifier
 
setClassifierParams(ClassifierParams) - Method in class classifier.MahalanobisClassifier
 
setClassifierParams(ClassifierParams) - Method in class whistleClassifier.FragmentClassifierParams
 
setClassifierType(int) - Method in class whistleClassifier.FragmentClassifierParams
 
setClassifierUsed(String) - Method in class rocca.RoccaLoggingDataUnit
 
setClearAtStart(boolean) - Method in class PamguardMVC.PamDataBlock
Flag to say that data should be cleared every time PAMGuard starts.
setClickAlarmParameters(ClickAlarmParameters) - Method in class clickDetector.dataSelector.ClickDataSelector
 
setClickClassifiactionList(ClickControl) - Static method in class staticLocaliser.panels.ClickEventLocaliserControl
 
setClickDataSource(String) - Method in class rocca.RoccaParameters
 
setClickDetection(ClickDetection) - Method in class rocca.RoccaContourDataBlock
Sets the clickDetection parameter.
setClickDetectionList(ArrayList<OfflineEventDataUnit>) - Method in class staticLocaliser.panels.ClickEventLocaliserControl
Make a list of all the clicks selected in the event table and which have been classified as the selected species.
setClickDetector(ClickDetector) - Method in class clickDetector.ClickDetection
 
setClickedPosition(MouseEvent) - Method in class difar.display.DIFARGram
Called when user clicks on the DIFARgram with the left mouse button
setClickFlags(int) - Method in class clickDetector.ClickDetection
 
setClickIdentifier(ClickIdentifier) - Method in class clickDetector.ClickControl
 
setClickLocalisation(ClickLocalisation) - Method in class clickDetector.ClickDetection
 
setClickNoise(ClickDetection) - Method in class rocca.RoccaContourDataBlock
 
setClickNoiseDataSource(String) - Method in class rocca.RoccaParameters
 
setClickNoiseSourceData(NoiseDataBlock) - Method in class rocca.RoccaProcess
 
setClickParameters(ClickParameters) - Method in class clickDetector.ClickControl
 
setClickSourceData(TrackedClickDataBlock) - Method in class rocca.RoccaProcess
 
setClickSpectrum(ClickSpectrum) - Method in class clickDetector.ClickSpectrumTemplateEditDialog
 
setClickTemplateParams(ClickSpectrumTemplateParams) - Method in class clickDetector.ClickSpectrum
 
setClickType(byte) - Method in class clickDetector.ClickDetection
 
setClickType(int) - Method in class clickDetector.ClickDetectionMatch
 
setClickTypeList(int[]) - Method in class rocca.RoccaParameters
 
setClipSizes(Container) - Method in class clipgenerator.clipDisplay.ClipLayout
 
setClipStart(long) - Method in class clipgenerator.clipDisplay.ClipDataProjector
 
setClockOnStartup - Variable in class GPS.GPSParameters
 
setCode(int) - Method in interface clickDetector.ClickClassifiers.basicSweep.CodeHost
 
setCode(String) - Method in class generalDatabase.lookupTables.LookupItem
 
setColor(Color) - Method in class clickDetector.ClickTemplate
 
setColor(ColourArray.ColourArrayType) - Method in class PamGraph3D.spectrogram3D.Surface3D
 
setColor(Component, PamColors.PamColor) - Method in class PamView.PamColors
Color a component immediately.
setColorOffset(double) - Method in class rocca.SpectrogramPanel
Updates the offset factor used to calculate brightness.
setColors() - Method in class PamView.PamColors
 
setColors() - Method in class rocca.SpectrogramPanel
Set the colors of the spectrogram, based on the FFT values
setColorScale(double) - Method in class rocca.SpectrogramPanel
Updates the scale factor used to calculate contrast.
setColour(int) - Method in class clickDetector.dialogs.ClickColoursPanel
 
setColourMap(ColourArray.ColourArrayType) - Method in class clickDetector.ConcatenatedSpectParams
 
setColourMap(ColourArray.ColourArrayType) - Method in class clipgenerator.clipDisplay.ClipDisplayParameters
 
setColourMap(ColourArray.ColourArrayType) - Method in class Localiser.timeDelayLocalisers.LikelihoodSurfaceParams
 
setColourMap(ColourArray.ColourArrayType) - Method in class Spectrogram.ColourRangeSlider
 
setColourMap(ColourArray) - Method in class Spectrogram.ColourRangeSlider
 
setColourMap(ColourArray.ColourArrayType) - Method in class Spectrogram.ColourRangeSliderUI
Set the colour array type for the colour slider.
setColourMap(ColourArray) - Method in class Spectrogram.ColourRangeSliderUI
Set the colour array for the slider.
setColourMap(ColourArray.ColourArrayType) - Method in class Spectrogram.SpectrogramParameters
 
setColourMap(ColourArray) - Method in class staticLocaliser.mapping.SLMapGraphics
 
setColumnData(int, Object) - Method in class generalDatabase.SQLLogging
Data values going in and out of the database are stored with their respective PamTableItems.
setComboFromCode() - Method in class generalDatabase.lookupTables.LookupComponent
 
setCommandProcess(boolean) - Method in class networkTransfer.send.NetworkSendProcess
 
setCommandStatus(int) - Method in class networkTransfer.receive.BuoyStatusDataUnit
 
setComment(String) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setComment(String) - Method in class listening.ThingHeard
 
setComment(String) - Method in class targetMotionModule.TargetMotionResult
 
setComment(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setComment(String) - Method in class targetMotionOld.TargetMotionResult
 
setCommentText(String) - Method in class videoRangePanel.LandMarkGroup
 
setCommPortName(String) - Method in class portcomms.SerialPortParameters
 
setCompassData(long, double[]) - Method in class networkTransfer.receive.BuoyStatusDataUnit
 
setComplete(boolean) - Method in class dataPlots.mouse.TDGraphZoomer
 
setComplete(boolean) - Method in class Spectrogram.SpectrogramZoomer
 
setComplexSpectrum() - Method in class clickDetector.ClickDetection
 
setComponentOpaqueness(JComponent, boolean) - Method in class PamView.hidingpanel.HidingDialog
 
setCompressedData(byte[][], double) - Method in class clickDetector.ClickDetection
Set the compressed wave data (used when reading back from file).
setCompressVal(int) - Method in class Localiser.timeDelayLocalisers.MCMCPanel
Sets the compression value.
setConfigurationDialogExpandedState(String) - Method in class likelihoodDetectionModule.TreeTableModel
Sets the configuration dialog expanded state.
setConfigurationDialogExpandedState(String) - Method in class likelihoodDetectionModule.TreeTableModelAdapter
Sets the configuration dialog expanded state.
setConfigurationDialogSettings(ConfigurationDialogSettings) - Method in class likelihoodDetectionModule.LikelihoodDetectionParameters
Sets the configuration dialog settings that are used to have consistent user settings for the configuration dialog between program executions.
setConfigurationDialogSettings(ConfigurationDialogSettings) - Method in class likelihoodDetectionModule.TreeTableModel
Sets the configuration dialog settings that are to be preserved with the LikelihoodDetectionParameters.
setConfigurationDialogSettings(ConfigurationDialogSettings) - Method in class likelihoodDetectionModule.TreeTableModelAdapter
Sets the configuration dialog settings.
setConfusionMatrix(Matrix) - Method in class whistleClassifier.FragmentClassifierParams
 
setConnectionType(int) - Method in class whistlesAndMoans.WhistleToneConnectProcess.ShapeConnector
 
setConnectType(int) - Method in class whistlesAndMoans.WhistleToneParameters
 
setContourChanged(boolean) - Method in class rocca.RoccaContour
 
setContourStats(RoccaContourStats) - Method in class rocca.RoccaLoggingDataUnit
 
setContrastingColour(Color) - Method in class PamView.ColourArray
Set a contrasting colour which is different to ALL of the colours in the array.
setControls(ClickParameters) - Method in class clickDetector.ClickToolBar
 
setCoordinate(int, double) - Method in class Array.Streamer
 
setCoordinateError(int, double) - Method in class Array.Streamer
 
setCoordinateErrors(double[]) - Method in class Array.Streamer
 
setCoordinates(double[]) - Method in class Array.Streamer
 
setCoreModule(boolean) - Method in class PamModel.PamModuleInfo
 
setCorrectionValue(Window, Double) - Method in class difar.calibration.CalibrationProcess
Set the correction value.
setCounter(boolean) - Method in class generalDatabase.PamTableItem
 
setCountSeconds() - Method in class eventCounter.EventCounterSidePanel
 
setCountSeconds(int) - Method in class SoundRecorder.trigger.RecorderTriggerData
 
setCourseOverGround(double) - Method in class GPS.GpsData
 
setCrampLabels(boolean) - Method in class Layout.PamAxis
Cramped labels means that when drawing an axis, the end labels will be shifted to remain within the bounds of the axis itself.
setCrossReferenceItem(PamTableItem) - Method in class generalDatabase.PamTableItem
Sets the cross reference item.
setCrossReferenceItem(String, String) - Method in class generalDatabase.PamTableItem
Sets the cross reference item.
setCSVExportEnabled(boolean) - Method in class staticLocaliser.panels.OptionsDialog
 
setCumulativeContourCount(int[]) - Method in class whistleClassifier.training.TrainingDataGroup
 
setCurrentArray(PamArray) - Method in class Array.ArrayManager
 
setCurrentAxisName(String) - Method in class dataPlots.data.TDDataInfo
Set the current data units - this must be a String which matches one of the strings in dataLineInfos() or all will go horribly wrong.
setCurrentCalibration(VRCalibrationData) - Method in class videoRangePanel.VRParameters
 
setCurrentCalibrationIndex(int) - Method in class videoRangePanel.VRParameters
 
setCurrentConnection(Connection) - Method in class generalDatabase.pamCursor.PamCursor
 
setCurrentDatablock(PamDataBlock) - Method in class staticLocaliser.StaticLocaliserControl
 
setCurrentDataBlocks(ArrayList<PamDataBlock>) - Method in class staticLocaliser.StaticLocaliserControl
 
setCurrentDetection(PamDetection) - Method in class staticLocaliser.algorithms.AbstractSLAlgorithm
 
setCurrentDetection(PamDetection) - Method in class staticLocaliser.panels.ClickEventLocaliserControl
 
setCurrentDetection(PamDetection) - Method in class staticLocaliser.panels.ClickLocaliserControl
 
setCurrentDetection(PamDetection) - Method in class staticLocaliser.panels.LocAlgorithmControl
 
setCurrentDetection(PamDetection) - Method in class staticLocaliser.panels.LocalisationInformation
 
setCurrentDetection(PamDetection) - Method in class staticLocaliser.panels.LocalisationResultsGraph
 
setCurrentDetection(PamDetection) - Method in class staticLocaliser.panels.LocalisationVisualisation
 
setCurrentDetection(PamDetection) - Method in class staticLocaliser.panels.LocQueuePanel
 
setCurrentDetection(PamDetection) - Method in class staticLocaliser.panels.LocResultsPanel
 
setCurrentDetection(PamDetection) - Method in class staticLocaliser.panels.MapPanel3DSL
 
setCurrentDetection(PamDetection) - Method in interface staticLocaliser.panels.SLPanel
Set the current detection.
setCurrentDetection(PamDetection) - Method in class staticLocaliser.panels.TDVisualisation
 
setCurrentDetection(PamDetection) - Method in class staticLocaliser.panels.WhistleLocaliserControl
 
setCurrentEventIndex(int, Object) - Method in class targetMotionOld.dialog.DialogMap2D
 
setCurrentEventIndex(int, Object) - Method in class targetMotionOld.dialog.DialogMap3D
 
setCurrentEventIndex(int, Object) - Method in class targetMotionOld.dialog.EventControlPanel
 
setCurrentEventIndex(int, Object) - Method in class targetMotionOld.dialog.ModelControlPanel
 
setCurrentEventIndex(int, Object) - Method in class targetMotionOld.dialog.ModelResultPanel
 
setCurrentEventIndex(int, Object) - Method in class targetMotionOld.dialog.TargetMotionDialog
 
setCurrentEventIndex(int, Object) - Method in interface targetMotionOld.dialog.TMDialogComponent
Current event has been set (possibly in one of the other panels)
setCurrentEventIndex(int, Object) - Method in class targetMotionOld.TargetMotionLocaliser
 
setCurrentHeading(PamVector) - Method in class simulatedAcquisition.SimObjectDataUnit
 
setCurrentHeight(double) - Method in class simulatedAcquisition.SimObjectDataUnit
 
setCurrentHeightIndex(int) - Method in class videoRangePanel.VRParameters
 
setCurrentID(String) - Method in class PamView.PamHelpBroker
 
setCurrentID(Map.ID) - Method in class PamView.PamHelpContentViewer
 
setCurrentID(String) - Method in class PamView.PamHelpContentViewer
 
setCurrentImage(PamImage) - Method in class videoRangePanel.VRControl
 
setCurrentLandMarkGroupIndex(int) - Method in class videoRangePanel.VRParameters
 
setCurrentlySelectedGroup(String) - Method in class difar.DifarControl
 
setCurrentlySelectedGroup(String) - Method in class difar.display.DIFARGroupPanel
 
setCurrentMethodId(int) - Method in class videoRangePanel.VRHorzMethods
 
setCurrentMethods(int[]) - Method in class videoRangePanel.LocationManager
 
setCurrentMousePoint(Point) - Method in class PamView.zoomer.ZoomPolygon
 
setCurrentPosition(long, LatLong, double, PamVector) - Method in class simulatedAcquisition.SimObjectDataUnit
 
setCurrentRunConfig(int) - Method in class staticLocaliser.StaticLocalise
 
setCurrentStatus(int) - Method in class alarm.AlarmDataUnit
 
setCurrentStream(int) - Method in class binaryFileStorage.BinaryMapMakeProgress
 
setCurrentSymbol(PamSymbol) - Method in class PamView.PamSymbolSelector
 
setCurrentTMinfo(TargetMotionInformation) - Method in class targetMotionModule.TargetMotionControl
 
setCurrentType(int) - Method in class Localiser.timeDelayLocalisers.Hyperbolic
 
setCurrentUnit(RoccaSightingDataUnit) - Method in class rocca.RoccaSidePanel
 
setCurrentURL(URL) - Method in class PamView.PamHelpBroker
 
setCurrentURL(URL) - Method in class PamView.PamHelpContentViewer
 
setCurrentView(String) - Method in class PamView.PamHelpBroker
 
setCursorColour(Color) - Method in class videoRangePanel.VRCursor
 
setCursorType(int) - Static method in class generalDatabase.pamCursor.PamCursorManager
Set the cursor type, SCROLLABLE or NON_SCROLLABLE
setCurveR(double[]) - Method in class simulatedAcquisition.sounds.RandomQuadratics
 
setDaqDialog(AcquisitionDialog) - Method in class hfDaqCard.SmruDaqDialogPanel
 
setDaqProcess(AcquisitionProcess) - Method in class Acquisition.AcquisitionControl
 
setDaqSystemType(String) - Method in class Acquisition.AcquisitionParameters
 
setDaqSystemType(String) - Method in class Acquisition.DaqStatusDataUnit
 
setDaqType(String) - Method in class Acquisition.AcquisitionCParameters
 
setData(float[], int) - Method in class dataGram.DatagramDataPoint
 
setData(ArrayList<LandmarkData>) - Method in class landMarks.LandmarkDatas
 
setData(double[]) - Method in class likelihoodDetectionModule.linearAverageSpectra.AveragedSpectraDataUnit
 
setData(NormalizedData[]) - Method in class likelihoodDetectionModule.normalizer.NormalizedDataUnit
 
setData(double[]) - Method in class likelihoodDetectionModule.spectralEti.SpectralEtiDataUnit
 
setData(Object) - Method in class loggerForms.controls.CharAreaControl
 
setData(Object) - Method in class loggerForms.controls.CheckboxControl
 
setData(Object) - Method in class loggerForms.controls.LatLongControl
 
setData(Object) - Method in class loggerForms.controls.LatLongTimeControl
 
setData(Object) - Method in class loggerForms.controls.LoggerControl
this will populate the Field with either last entered data or most up to date entry
setData(Object) - Method in class loggerForms.controls.LookupControl
 
setData(Object) - Method in class loggerForms.controls.SimpleControl
 
setData(Object) - Method in class loggerForms.controls.SubFormControl
 
setData(Object) - Method in class loggerForms.controls.TimeControl
 
setData(Object) - Method in class loggerForms.controls.TimestampControl
set data in long format - TODO should change to timestamp
setData(double[]) - Method in class nidaqdev.Nidaq.DaqData
 
setData(LoadQueueProgressData) - Method in class pamScrollSystem.LoadingDataDialog
 
setDatabaseId(int) - Method in class generalDatabase.lookupTables.LookupItem
 
setDatabaseIndex(int) - Method in class PamguardMVC.PamDataUnit
 
setDatabaseUpdateOf(int) - Method in class PamguardMVC.PamDataUnit
 
setDataBits(int) - Method in class portcomms.SerialPortParameters
 
setDataBits(int) - Method in class serialComms.SerialPortPanel
 
setDataBlock(PamDataBlock, boolean) - Method in class networkTransfer.send.NetworkSendParams
Set send selection for an individual datablock.
setDataBlock(PamDataBlock) - Method in class PamView.ObserverListPopup
 
setDataCountSeconds(int) - Method in class eventCounter.DataCounter
 
setDataDate(long) - Method in class binaryFileStorage.BinaryFooter
 
setDataDate(long) - Method in class binaryFileStorage.BinaryHeader
 
setDataFolder(String) - Method in class zipUnpacker.ZipSettings
 
setDataGain(double[]) - Method in class amplifier.AmplifiedDataBlock
 
setDatagram(Datagram) - Method in class binaryFileStorage.BinaryOfflineDataMapPoint
 
setDatagram(Datagram) - Method in class cpod.CPODDataMapPoint
 
setDatagram(Datagram) - Method in interface dataGram.DatagramPoint
 
setDataGramCursorInfo(Double, Double) - Method in class difar.display.DemuxProgressDisplay
 
setDatagramManager(DatagramManager) - Method in class fileOfflineData.OfflineFileControl
 
setDatagramProvider(DatagramProvider) - Method in class PamguardMVC.PamDataBlock
 
setDatagramSettings(DatagramSettings) - Method in class dataGram.DatagramManager
 
setDataKeepTimes() - Method in class difar.DifarProcess
 
setDataName(String) - Method in class PamguardMVC.PamDataBlock
 
setDataOk(boolean) - Method in class GPS.GpsData
 
setDataSource(String) - Method in class PamView.GroupedSourceParameters
 
setDataType(byte) - Method in class clickDetector.ClickDetection
 
setdataUnit(PamDataUnit) - Method in class PamGraph3D.graphDisplay3D.DataUnitShape3D
 
setDataUnit(T) - Method in class targetMotionOld.dialog.TargetMotionDialog
Select a sepcific data unit in the drop down menu.
setDataUnitFileInformation(DataUnitFileInformation) - Method in class PamguardMVC.PamDataUnit
 
setDataUnitMatcher(DataUnitMatcher) - Method in class PamguardMVC.DataUnitFinder
 
setDataUnits(ArrayList<PamDetection>) - Method in class PamDetection.TDArrayList
 
setDate(int) - Method in class GPS.GpsData
 
setDate(Date) - Method in class videoRangePanel.PamImage
 
setDayBudgetMB(int) - Method in class SoundRecorder.trigger.RecorderTriggerData
 
setDayTime() - Method in class PamView.PamColors
 
setDBamplitude(double) - Method in class clickDetector.OldClickClass
 
setDBAmplitude(double) - Method in class whistleDetector.WhistleShape
 
setDbConvertProgress(DBConvertProgress) - Method in class clickDetector.offlineFuncs.rcImport.RainbowDatabseConverter
 
setDbParams(boolean) - Method in class generalDatabase.MySQLDialogPanel
 
setDefault() - Method in class loggerForms.controls.CharAreaControl
 
setDefault() - Method in class loggerForms.controls.CheckboxControl
 
setDefault() - Method in class loggerForms.controls.CounterControl
 
setDefault() - Method in class loggerForms.controls.LatLongControl
 
setDefault() - Method in class loggerForms.controls.LatLongTimeControl
 
setDefault() - Method in class loggerForms.controls.LoggerControl
Return to the default value based on the associated control description
setDefault() - Method in class loggerForms.controls.LookupControl
 
setDefault() - Method in class loggerForms.controls.SimpleControl
 
setDefault() - Method in class loggerForms.controls.SubFormControl
 
setDefault() - Method in class loggerForms.controls.TimeControl
 
setDefault() - Method in class loggerForms.controls.TimestampControl
 
setDefaultChannelList() - Method in class Acquisition.AcquisitionParameters
Creates a default channel list 0,1,2,3,4 etc.
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamButton
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamCheckBox
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamDesktopPane
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamLabel
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamPanel
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamProgressBar
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamRadioButton
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamScrollPane
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamSlider
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamTabbedPane
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamTable
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamTextArea
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.PamTextDisplay
 
setDefaultColor(PamColors.PamColor) - Method in class PamView.TopToolBar
 
setDefaultFile(String) - Method in class PamController.PamSettingManager
Set the default (first) file in the settings file data.
setDefaultName(String) - Method in class PamModel.PamModuleInfo
 
setDefaultRange(double) - Method in class PamView.PamDetectionOverlayGraphics
 
setDefaultSymbol(PamSymbol) - Method in class landMarks.LandmarkControl
 
setDefaultTime(int) - Method in class Map.MapDetectionsManager
 
setDefaultValue(double) - Method in class pamScrollSystem.RangeSpinner
 
setDegsFreedom(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setDelay(int, double) - Method in class clickDetector.ClickDetection
Set the time of arrival delay in samples.
setDelay(int) - Method in class clickDetector.OldClickClass
 
setDelay(int) - Method in class PamUtils.TimedObservable
 
setDelay(int, int) - Method in class whistleDetector.WhistleLocalisation
 
setDelayCorrection(double) - Method in class clickDetector.ClickLocalisation
 
setDemuxedDecimatedData(double[][]) - Method in class difar.DifarDataUnit
 
setDepth(float[]) - Method in class d3.D3DataUnit
 
setDepth(double) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setDepth(int) - Method in class Map.MapContour
 
setDepth(double) - Method in class PamDetection.PamLocalisation
Deprecated.
 
setDepth(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setDepthControl(DepthControl) - Method in class Array.ArrayManager
 
setDepthData(double[]) - Method in class depthReadout.DepthDataUnit
 
setDepthErr(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setDescription(String) - Method in class PamView.ManagedSymbolInfo
 
setDetData(double[]) - Method in class IshmaelDetector.IshDetFnDataUnit
 
setDetection(PamDetection) - Method in class PamDetection.AbstractDetectionMatch
 
setDetectionCount(int) - Method in class rocca.RoccaLoggingDataUnit
 
setDetectionData(boolean) - Method in class PamView.PamDetectionOverlayGraphics
 
setDetectionListComboBox() - Method in class staticLocaliser.panels.ClickEventLocaliserControl
Resets the combo box to the latest list
setDetectionMatchResults(ArrayList<PamDetection>) - Method in class staticLocaliser.SLResult
 
setDetectionType(Integer) - Method in class clickDetector.ClickDetectionMatch
 
setDetectionType(Integer) - Method in class PamDetection.AbstractDetectionMatch
 
setDetectionType(String) - Method in class PamDetection.PamDetection
 
setDetectionType(Integer) - Method in class staticLocaliser.StaticLocalise
 
setDevice(int) - Method in class mcc.MccPanel
 
setDeviceIsSimulated(boolean) - Method in class nidaqdev.Nidaq.DAQmxGetDevIsSimulatedParams
 
setDeviceList(int[]) - Method in class nidaqdev.NIDaqParams
 
setDeviceName(String) - Method in class nidaqdev.Nidaq.DAQmxGetDevIsSimulatedParams
 
setDialogComponent(JComponent) - Method in class PamView.PamDialog
Used to set the main panel containing dialog controls -
setDialogPosition() - Method in class PamView.hidingpanel.HidingDialogPanel
 
setDifarCrossing(DIFARCrossingInfo) - Method in class difar.DifarDataUnit
 
setDifarGain(double) - Method in class difar.DifarDataUnit
 
setDifarSelectParameters(DifarSelectParameters) - Method in class difar.dataSelector.DifarDataSelector
 
setDimensions(double, double, double, double) - Method in class GPS.ShipDimensionsDrawing
 
setDimensions(double[]) - Method in class GPS.ShipDimensionsFields
 
setDiscard(Boolean) - Method in class clickDetector.ClickTypeParams
 
setDiscardSmallOnes(boolean) - Method in class whistlesAndMoans.FragmentingFragmenter
Set by teh RejoinFragments superclass so that all fragments are kept
setDisplayChannels(int) - Method in class clickDetector.ClickBTDisplay
 
setDisplayChannels(int) - Method in class clickDetector.tdPlots.ClickPlotInfo
 
setDisplayParams(int, OneBandDisplayParams) - Method in class noiseOneBand.OneBandDisplayPanel
 
setDisplaySampleRate(float) - Method in class difar.DifarDataUnit
 
setDisplayTime(long) - Method in class PamController.masterReference.ArrayReferenceSystem
 
setDisplayTime(long) - Method in class PamController.masterReference.GPSDataSystem
 
setDisplayTime(long) - Static method in class PamController.masterReference.MasterReferencePoint
Used in the viewer if something is scrolling and wants to change the default time.
setDisplayTime(long) - Method in interface PamController.masterReference.MasterReferenceSystem
 
setDisplayType(int) - Method in class dataGram.DatagramScaleInformation
 
setDoBinaryStore(boolean) - Method in class binaryFileStorage.BinaryDataSource
 
setDone(boolean) - Method in class PamUtils.DetectionMatchWorker
 
setDoRun(boolean) - Method in class offlineProcessing.OfflineTask
Set whether or not this task within a taskGroup should be run.
setDoubleValue(JTextField, Double, String) - Static method in class PamView.PamDialog
Set a Double value in a text field, setting appropriately to null if the Double value is null
setDrawLine(boolean) - Method in class Layout.PamAxis
 
setDrawLineToLocations(boolean) - Method in class PamView.PamDetectionOverlayGraphics
 
setDrawTypes(int) - Method in class dataPlots.data.SimpleSymbolChooser
 
setDrawTypes(int) - Method in class difar.plots.DifarSymbolChooser
 
setDriverName(String) - Method in class asiojni.AsioJniInterface.AsioDriverSettings
 
setDstrParameters(DStrParameters) - Method in class decimus.summarystring.DStrControl
 
setDstrPlotParams(DStrParameters) - Method in class decimus.summarystring.plots.DstrPlotInfo
 
setDTG(double) - Method in class beakedWhaleProtocol.BeakedControl
 
setDuration(long) - Method in class PamDetection.AcousticDataUnit
 
setDurationMillis(long) - Method in class xBatLogViewer.XBatLogDataUnit
 
setDutyCycle(double) - Method in class rocca.RoccaContourDataUnit
 
setDx(double) - Method in class Array.Streamer
 
setDy(double) - Method in class Array.Streamer
 
setDz(double) - Method in class Array.Streamer
 
setEastAxis(PamAxis) - Method in class Layout.PamAxisPanel
 
setEastComponent(JComponent) - Method in class clipgenerator.clipDisplay.ClipDisplayUnit
Add a component to the display unit to be inserted into the East of a BorderLayout
setEastPanel(Component) - Method in class Layout.PamFramePlots
 
setEcho(boolean) - Method in class clickDetector.ClickDetection
 
setEchoDetectionSystem(EchoDetectionSystem) - Method in class clickDetector.ClickControl
 
setEchoDetector(EchoDetector) - Method in class clickDetector.ClickDetector.ChannelGroupDetector
 
setEdgePanel(PamPanel) - Method in class PamView.hidingpanel.HidingPanel
 
setElement(int, double) - Method in class pamMaths.PamVector
Set a single vector element
setEnable(boolean) - Static method in class PamModel.SMRUEnable
 
setEnable(boolean) - Static method in class smlGainControl.SEICHEEnable
 
setEnable(boolean) - Method in class zipUnpacker.ZipSettings
 
setEnableAlgorithmSel(boolean) - Method in class staticLocaliser.panels.StaticLocalisationMainPanel
 
setEnabled(boolean) - Method in class clickDetector.offlineFuncs.OfflineEventListPanel
 
setEnabled(boolean) - Method in class NMEA.NMEAStringSelector
Enable to combo box of available NMEA string.
setEnabled(boolean) - Method in class pamScrollSystem.RangeSpinner
Enable the controls
setEnabled(boolean) - Method in class PamUtils.LatLongDialogStrip
 
setEnabled(boolean) - Method in class PamUtils.SelectFolder
 
setEnabled(boolean) - Method in class PamView.PamSymbolSelector
 
setEnabled(boolean) - Method in class PamView.SourcePanel
 
setEnabled(boolean) - Method in class SoundRecorder.trigger.RecorderTriggerData
 
setEnabledActions(boolean[]) - Method in class alarm.AlarmParameters
 
setEnabledWithChannels(boolean) - Method in class PamView.SourcePanel
 
setEnableLocalise(boolean) - Method in class staticLocaliser.panels.StaticLocalisationMainPanel
 
setEnableOrientation(boolean) - Method in class Array.Streamer
 
setEndAngle(double) - Method in class angleVetoes.AngleVeto
 
setEndF(short) - Method in class cpod.CPODClick
 
setEndLatitude(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setEndLatLong(GpsData) - Method in class targetMotionModule.TargetMotionResult
Set the location on the track line of the last detection used in this target motion loclaisation.
setEndLongitude(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setEndOfWhistle(long, double) - Method in class rocca.RoccaSidePanel
 
setEndTime(long) - Method in class Acquisition.offlineFuncs.WavFileDataMapPoint
 
setEndTime(long) - Method in class dataMap.OfflineDataMapPoint
 
setEnergy(double) - Method in class rocca.RoccaContourDataUnit
 
setError(int, double) - Method in class targetMotionModule.TargetMotionResult
Set the error along a particular dimension
setError(int, double) - Method in class targetMotionOld.TargetMotionResult
Set the error along a particular dimension
setErrorHeadings(Double) - Method in class angleMeasurement.AngleDataUnit
 
setErrorPitch(Double) - Method in class angleMeasurement.AngleDataUnit
 
setErrorReferenceAngle(int, double) - Method in class Localiser.bearingLocaliser.GroupDetection
 
setErrors(Point3d) - Method in class Localiser.timeDelayLocalisers.MCMCTDResults
 
setErrorTilt(Double) - Method in class angleMeasurement.AngleDataUnit
 
setErrorX(double) - Method in class targetMotionModule.TargetMotionResult
set Cartesian x Error; Error should be 95% Confidence interval;
setErrorX(double) - Method in class targetMotionOld.TargetMotionResult
set Cartesian x Error; Error should be 95% Confidence interval;
setErrorY(double) - Method in class targetMotionModule.TargetMotionResult
set Cartesian y Error; Error should be 95% Confidence interval;
setErrorY(double) - Method in class targetMotionOld.TargetMotionResult
set Cartesian y Error; Error should be 95% Confidence interval;
setErrorZ(double) - Method in class targetMotionModule.TargetMotionResult
set Cartesian z Error.
setErrorZ(double) - Method in class targetMotionOld.TargetMotionResult
set Cartesian z Error.
setEstimatedPeakTimeAccuracy(double) - Method in class likelihoodDetectionModule.thresholdDetector.ThresholdDetectorDataUnit
 
setEtaSeconds(double) - Method in class beakedWhaleProtocol.BeakedControl
 
setEulerAngles(double[]) - Method in class GPS.GpsData
Set the Euler angles which describe the rotation of this position.
setEventCounterMonitor(EventCounterMonitor) - Method in class eventCounter.DataCounter
 
setEventEndTime(long) - Method in class PamDetection.PamDetection
 
setEventId(int) - Method in class clickDetector.ClickDetection
 
setEventId(int) - Method in class clickDetector.OldClickClass
 
setEventId(int) - Method in class Localiser.bearingLocaliser.GroupDetection
 
setEventRotator(PamDetection) - Method in class targetMotionOld.AbstractTimeDelayLocaliser
 
setEventTrigger(int, int) - Method in class eventCounter.DataCounter
 
setEventType(String) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setExtraAxisEndLabel(String) - Method in class Layout.PamAxis
 
setExtraAxisStartLabel(String) - Method in class Layout.PamAxis
 
setExtraEast(int) - Method in class PamView.JBufferedPanel
 
setExtraFieldData(String[]) - Method in class alarm.AlarmDataUnit
 
setExtraInfo(byte[]) - Method in class binaryFileStorage.BinaryHeader
 
setExtraNorth(int) - Method in class PamView.JBufferedPanel
 
setExtraSouth(int) - Method in class PamView.JBufferedPanel
 
setExtraWest(int) - Method in class PamView.JBufferedPanel
 
setFavSpecies(LookupItem[]) - Method in class difar.DifarParameters
 
setFeature(double[][]) - Method in class loc3d_Thode.GroupDetDataUnit
 
setFeature(double, int, int) - Method in class loc3d_Thode.GroupDetDataUnit
 
setFftData(Complex[]) - Method in class fftManager.FFTDataUnit
 
setFftHop(int) - Method in class fftManager.FFTDataBlock
 
setFftHop(int) - Method in class whistleClassifier.FragmentClassifierParams
 
setFfthop(int) - Method in class whistleClassifier.training.TrainingDataSet
 
setFfthop(int) - Method in class whistleClassifier.TrainingDataSet
 
setFftHop(int) - Method in class whistlesAndMoans.AbstractWhistleDataBlock
 
setFFTLength(int) - Method in class clickDetector.WignerPlotdialog
 
setFftLength(int) - Method in class fftManager.FFTDataBlock
 
setFFTLength(int) - Method in interface fftManager.FFTLengthModeled
 
setFFTLength(int) - Method in class fftManager.FFTParametersDialog
 
setFftLength(int) - Method in class whistleClassifier.FragmentClassifierParams
 
setFftLength(int) - Method in class whistleClassifier.training.TrainingDataSet
 
setFftLength(int) - Method in class whistleClassifier.TrainingDataSet
 
setFftLength(int) - Method in class whistlesAndMoans.AbstractWhistleDataBlock
 
setFieldsSet(boolean) - Method in class rocca.RoccaClassifier
 
setFileDateText() - Method in class Acquisition.FolderInputSystem
 
setFileEndReason(int) - Method in class binaryFileStorage.BinaryFooter
 
setFileEndSample(long) - Method in class binaryFileStorage.BinaryFooter
 
setFileLength(long) - Method in class binaryFileStorage.BinaryFooter
 
setFileLoaded(boolean) - Method in class clickDetector.ClickAlarm
 
setFileName(String) - Method in interface offlineProcessing.TaskMonitor
Set the current file name.
setFileName(String) - Method in class PamUtils.FileParts
 
setFilename(String) - Method in class rocca.RoccaLoggingDataUnit
 
setFilenameTemplate(String) - Method in class rocca.RoccaParameters
 
setFileParams(OfflineFileParams) - Method in class fileOfflineData.OfflineFileControl
 
setFileStartSample(long) - Method in class binaryFileStorage.BinaryHeader
 
setFileType(AudioFileFormat.Type) - Method in class SoundRecorder.RecorderSettings
 
setFill(boolean) - Method in class PamView.PamSymbol
 
setFillColor(Color) - Method in class PamView.PamSymbol
 
setFillColour(Color) - Method in class generalDatabase.lookupTables.LookupItem
 
setFillMode(int) - Method in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
setFilterIndex(int, int) - Method in class hfDaqCard.SmruDaqParameters
 
setFilterMethod(IIRFilterMethod) - Method in class Filters.IirfFilter
 
setFilterParams(FilterParams) - Method in class Filters.FilterMethod
 
setFilterParams(FilterParams) - Method in class noiseOneBand.OneBandParameters
 
setFilters(double, double) - Method in class rocca.RoccaContour
 
setFirstDataTime(long) - Method in class dataMap.OfflineDataMap
 
setFirstDelay(int) - Method in class clickDetector.ClickLocalisation
 
setFirstDeleteIndex(long) - Method in class PamguardMVC.SaveRequirements
 
setFirstDeleteTime(long) - Method in class PamguardMVC.SaveRequirements
 
setFirstDetectionTime(long) - Method in class difar.trackedGroups.TrackedGroupDataUnit
 
setFirstFile(File) - Method in class PamController.SettingsFileData
 
setFirstUnitWithWhistle(int) - Method in class rocca.RoccaContourDataBlock
 
setFirstUpdateIndex(long) - Method in class PamguardMVC.SaveRequirements
 
setFirstUpdateTime(long) - Method in class PamguardMVC.SaveRequirements
 
setFitData(int, GpsData, LatLong, double, double, double, double, double, double) - Method in class Localiser.bearingLocaliser.GroupDetection
 
setFitOrder(int) - Method in class angleMeasurement.AngleCalibration
 
setFixedScaleInformation(TDScaleInformation) - Method in class dataPlots.data.TDDataInfo
 
setFlag(int) - Method in class staticLocaliser.panels.LocShape3D
 
setFlowControl(int) - Method in class portcomms.SerialPortParameters
 
setFlowControl(int) - Method in class serialComms.SerialPortPanel
 
setFluxgateWorldParameters(FluxgateWorldParameters) - Method in class angleMeasurement.FluxgateWorldAngles
 
setFluxgateWorldParameters(FluxgateWorldParameters, boolean) - Method in class angleMeasurement.FluxgateWorldAngles
 
setFocalICIList(int) - Method in class loc3d_Thode.CrossStationMatcher
 
setFocalStation(StationQueue) - Method in class loc3d_Thode.CrossStationMatcher
 
setFocus(boolean) - Method in class likelihoodDetectionModule.CheckRenderer.TreeLabel
Sets the focus.
setFocusOnTextInput() - Method in class UserInput.UserInputPanel
 
setFolderInputParameters(FolderInputParameters) - Method in class Acquisition.FolderInputSystem
 
setFolderName(String) - Method in class PamUtils.SelectFolder
 
setForceFirstVal(boolean, double) - Method in class Layout.PamAxis
 
setForceReCalc(boolean) - Method in class staticLocaliser.TDManager
 
setForeground(Color) - Method in class loggerForms.controls.LoggerFormLabel
 
setForeground(Color) - Method in class loggerForms.LoggerFormPanel
 
setFormat(String) - Method in class Layout.PamAxis
Set the format string for writing out numbers on the axis.
setFormatStyle(int) - Static method in class PamUtils.LatLong
 
setFormErrors(UDFErrors) - Method in class loggerForms.FormDescription
 
setFormOrderProperty(Integer) - Method in class loggerForms.FormDescription
Set the form order property.
setFormPlotOptions(FormPlotOptions) - Method in class loggerForms.FormDescription
 
setFormProperty(PropertyTypes, ItemInformation) - Method in class loggerForms.formdesign.FormEditor
Set a form property.
setFormsData(LoggerForm, Object[]) - Method in class loggerForms.FormsDataUnit
used for updating data units(editing forms)
setFormWarnings(UDFErrors) - Method in class loggerForms.FormDescription
 
setFractionalScale(boolean) - Method in class Layout.PamAxis
 
setFragmentClassifier(Classifier) - Method in class whistleClassifier.WhistleClassifierControl
 
setFragmentLength(int) - Method in class whistleClassifier.FragmentClassifierParams
 
setFragmentLength(int) - Method in class whistleClassifier.OverlappingFragmenter
 
setFragmentLength(int) - Method in class whistleClassifier.WhistleFragmenter
 
setFragmentParameteriser(FragmentParameteriser) - Method in class whistleClassifier.WhistleClassifierControl
 
setFrame(PamInternalFrame) - Method in class Layout.PamFramePlots
 
setFrameNumber(int) - Method in class PamController.PamControlledUnit
 
setFrameNumber(int) - Method in class PamView.PamView
 
setFreqArray(double[]) - Method in class xBatLogViewer.XBatLogDataUnit
 
setFreqsHz(double[]) - Method in class whistleClassifier.training.TrainingContour
 
setFrequency(double[]) - Method in class PamDetection.AcousticDataUnit
 
setFrequency(double[]) - Method in class xBatLogViewer.XBatLogDataUnit
 
setFrequencyAbsoluteRange(double, double) - Method in class Spectrogram.SpectrogramHidingPanel
 
setFrequencyHz(double[]) - Method in class whistleClassifier.TrainingContour
 
setFrequencyPoints(double[]) - Method in class dbht.DbHtParameters
 
setFrequencyRange(double[]) - Method in class whistleClassifier.FragmentClassifierParams
 
setFrequencyResolution(double) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the frequency resolution.
setFrequencySliderRange(double, double, double, double) - Method in class Spectrogram.SpectrogramHidingPanel
Set the slider frequecy range
setFullTablesCheck(boolean) - Method in class generalDatabase.DBControl
 
setGain(double) - Method in class Array.Preamplifier
 
setGainIndex(int, int) - Method in class hfDaqCard.SmruDaqParameters
 
setGpsCalendar(Calendar) - Method in class GPS.GpsData
 
setGpsData(GpsData) - Method in class Array.StreamerDataUnit
 
setGpsData(GpsData) - Method in class GPS.GpsDataUnit
 
setGpsData(long, GpsData) - Method in class networkTransfer.receive.BuoyStatusDataUnit
 
setGpsDataBlock(PamDataBlock) - Method in class PamModel.PamModel
 
setGPSLocData(LandMarkGroup) - Method in class videoRangePanel.VRParameters
 
setGPSLocDataSelIndex(int) - Method in class videoRangePanel.VRParameters
 
setGpsSource(GPSDataBlock) - Method in class WILDInterface.WILDParameters
 
setGPSText(LatLong, JTextField) - Method in class videoRangePanel.vrmethods.AbstractVRMethod
 
setGraphicsOverLayer(HistogramGraphicsLayer) - Method in class pamMaths.HistogramDisplay
 
setGraphicsUnderLayer(HistogramGraphicsLayer) - Method in class pamMaths.HistogramDisplay
 
setGraphParameters(GraphParameters) - Method in class dataPlots.layout.TDGraph
This only gets called when the serialised settings from psf file have been loaded, not at any other time !
setGroupChannels(int) - Method in class whistleDetector.PeakDetector
 
setGroupChannels(int) - Method in class whistleDetector.WhistleLinker
 
setGrouping(int) - Method in class PamView.GroupedSourcePanel
 
setGroupingType(int) - Method in class PamView.GroupedSourceParameters
 
setGroupName(String) - Method in class videoRangePanel.LandMarkGroup
 
setGrowing(boolean) - Method in class whistlesAndMoans.ConnectedRegion
 
setGuardBands(ArrayList<GuardBand>) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the guard bands.
setHalfLife(double) - Method in class angleVetoes.AngleVetoDisplay
 
setHandler(PanZoomBehaviour) - Method in class Map.DisplayPanZoom
 
setHasAngleAmbiguity(boolean) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setHasAngles(boolean) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setHasChanges(boolean) - Method in class binaryFileStorage.DataMapSerialiser
 
setHasCounter(CounterControl) - Method in class loggerForms.LoggerForm
sets hasCounter to true
setHasDepth(boolean) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setHasRanges(boolean) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setHeaderFormat(int) - Method in class binaryFileStorage.BinaryHeader
 
setHeaderLength(int) - Method in class binaryFileStorage.BinaryHeader
 
setHeading(Double) - Method in class Array.Streamer
 
setHeading(double, int) - Method in class PamDetection.PamLocalisation
Deprecated.
 
setHeadingReference(double) - Method in class radardisplay.RadarProjector
Set the plot heading reference in radians.
setHeadings(double[]) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setHeadings(double, int) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setHeadingTxt(Double) - Method in class videoRangePanel.vrmethods.ImageAnglePanel
 
setHeight(double) - Method in class beakedWhaleProtocol.ShoreStationDataUnit
 
setHeight(double) - Method in class PamUtils.LatLong
 
setHeight(int) - Method in class PamView.PamSymbol
 
setHeight(double) - Method in class simulatedAcquisition.SimObject
 
setHeightDatas(ArrayList<VRHeightData>) - Method in class videoRangePanel.VRParameters
 
setHeightOrigin(Double) - Method in class videoRangePanel.LandMark
 
setHeld(Boolean) - Method in class angleMeasurement.AngleDataUnit
 
setHeldAngle(AngleDataUnit) - Method in class angleMeasurement.AngleDataBlock
 
setHelpPoint(String) - Method in class PamView.PamDialog
Sets the starting point for Java help.
setHelpURL(String) - Method in class tipOfTheDay.PamTip
 
setHidden(boolean) - Method in class PamModel.PamModuleInfo
Hide the module.
setHiddenSliderTime(Integer) - Method in class Map.SimpleMap
 
setHidingDialogPanel(HidingDialogPanel) - Method in class dataPlots.layout.CompoundHidingDialog
 
setHighestStatus(int) - Method in class alarm.AlarmDataUnit
 
setHighlight(boolean) - Method in class PamView.hidingpanel.HidingPanel
Set whether the hiding panel is highlighted when the mouse enters.
setHighlight(Color) - Method in class PamView.PamButtonAlpha
 
setHighlightAppearance(LocShape3D) - Method in class staticLocaliser.algorithms.AbstractSLAlgorithm
 
setHighlightAppearance(LocShape3D) - Method in class staticLocaliser.algorithms.MarkovChainSL
 
setHighlightAppearance(LocShape3D) - Method in interface staticLocaliser.algorithms.SLAlgorithmModel
Set the highlighted appearance of a locShape.Note usually this will just be using getHighlightAppearance() functionality, however more complicated shapes may want to modify this function.
setHighResIdiBinScale(int) - Method in class clickDetector.IDI_DisplayParams
Sets the size (along the horizontal axis) of the IDI bins, in milliseconds/bin
setHintAndMessage(LoggerControl) - Method in class loggerForms.LoggerForm
 
setHoldSeconds(int) - Method in class alarm.AlarmParameters
Number of seconds to hold data for before deleting
setHorizonTilt(double) - Method in class videoRangePanel.vrmethods.AbstractVRMethod
 
setHwChannelList(int[]) - Method in class nidaqdev.NIDaqParams
 
setHydrophoneArray(ArrayList<ArrayList<Point3f>>) - Method in class Localiser.timeDelayLocalisers.Hyperbolic
 
setHydrophoneDelays(double[][]) - Method in class simulatedAcquisition.sounds.SimSound
 
setHydrophoneErrors(double[]) - Method in class Array.HydrophoneDataUnit
 
setHydrophoneFilter(int, double) - Method in class Array.PamArray
Set the hydrophone bandwidth
setHydrophoneGain(int, double) - Method in class Array.PamArray
Set the hydrophone preamplifier gain
setHydrophoneInterpolation(int) - Method in class Array.PamArray
 
setHydrophoneList(int[]) - Method in class Acquisition.AcquisitionControl
Sets the list of hydrophone numbers.
setHydrophoneList(int[]) - Method in class Acquisition.AcquisitionParameters
Set a hydrophone list.
setHydrophoneLocator(HydrophoneLocator) - Method in class Array.Streamer
 
setHydrophoneMap(int[]) - Method in class Array.HydrophoneDialogPanel
 
setHydrophoneOrigin(HydrophoneOriginMethod) - Method in class Array.Streamer
 
setHydrophonePos(ArrayList<ArrayList<Point3f>>) - Method in class Localiser.timeDelayLocalisers.MCMC
 
setHydrophonePos(ArrayList<ArrayList<Point3f>>) - Method in class Localiser.timeDelayLocalisers.Simplex
 
setHydrophonePos(ArrayList<ArrayList<Point3f>>) - Method in class staticLocaliser.TDManager
 
setHydrophones(Hydrophone) - Method in class Array.HydrophoneDataUnit
 
setHydrophoneStreamer(Streamer) - Method in class networkTransfer.receive.BuoyStatusDataUnit
Set the hydrophone streamer for the buoy.
setICI(double) - Method in class clickDetector.ClickDetection
 
setICI_err_thresh(double) - Method in class loc3d_Thode.CrossStationMatcher
 
setICISamples(long) - Method in class cpod.CPODClick
 
setIconHorizontalAlignment(int) - Method in class PamView.PamSymbol
 
setIconStyle(int) - Method in class PamView.PamSymbol
 
setIconVerticalAlignment(int) - Method in class PamView.PamSymbol
 
setIdentifier(String) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the identifier.
setImage(Image) - Method in class PamView.ClipboardCopier
 
setImageBearing(Double, Double) - Method in class videoRangePanel.vrmethods.ImageRotRibbonPanel
 
setImageBrightness(float, float) - Method in class videoRangePanel.panels.VRPanel
 
setImageBrightness(float, float) - Method in class videoRangePanel.VRControl
Se the image brightness
setImageHeading(Double) - Method in class videoRangePanel.vrmethods.ImageAnglePanel
 
setImagePitch(Double, Double) - Method in class videoRangePanel.vrmethods.ImageRotRibbonPanel
 
setImageTilt(Double, Double) - Method in class videoRangePanel.vrmethods.ImageRotRibbonPanel
Set image tilt text
setImmediate(boolean) - Method in class PamController.command.ExtCommand
 
setIMULoadIntermediate(boolean) - Method in class IMU.IMUImportMananger
Set whether the load progress is intermediate
setIncludeSubFolders(boolean) - Method in class PamUtils.SelectFolder
Set the state of the sub folder check box.
setInfo(long, int, long, long, int) - Method in class fftManager.FFTDataUnit
 
setInfo(long, int, long, long) - Method in class PamDetection.AcousticDataUnit
 
setInfo(long, int, long, long, float, float, long, double) - Method in class PamDetection.IshDetection
Set various parameters.
setInitialPosition() - Method in class rocca.RoccaSpecPopUp
Sets the initial position of the vertical scrollbar to center the user- selected area in the display window
setInnerPanel(JPanel) - Method in class Layout.PamAxisPanel
 
setInputChannelList(int[], int) - Method in class asiojni.AsioJniInterface
 
setInstruction() - Method in class videoRangePanel.vrmethods.IMUMethod
 
setIntermediate(boolean) - Method in class PamView.ImportLoadBar
 
setIntermediate(boolean) - Method in class PamView.PamLoadBar
 
setInterval(int) - Method in class dbht.offline.OfflineDbHtDataUnit
 
setInterval(double) - Method in class Layout.PamAxis
Set the interval between ticks.
setInterval(int) - Method in class noiseOneBand.offline.OfflineOneBandDataUnit
 
setInUse(boolean) - Method in class likelihoodDetectionModule.LikelihoodFFTProcess
 
setIshmaelData(IshmaelData) - Method in class ishmaelComms.IshmaelDataUnit
 
setItemErrors(int) - Method in class loggerForms.ItemDescription
 
setJerk(float[]) - Method in class d3.D3DataUnit
 
setJumps(ArrayList<ArrayList<Point3f>>) - Method in class staticLocaliser.SLResult
 
setKeyPanel(KeyPanel) - Method in class PamView.JPanelWithPamKey
 
setKeyPosition(int) - Method in class PamView.JPanelWithPamKey
 
setKeyType(int) - Method in class PamView.KeyPanel
 
setkHz(short) - Method in class cpod.CPODClick
 
setLabel(String) - Method in class Layout.PamAxis
 
setLabelPos(int) - Method in class Layout.PamAxis
 
setLandmarkData(LandmarkData) - Method in class landMarks.LandmarkDataUnit
 
setLandMarkDatas(ArrayList<LandMarkGroup>) - Method in class videoRangePanel.VRParameters
 
setLandMarks() - Method in class videoRangePanel.vrmethods.VRLandMarkMethod
Create a landmark list for the landmark combo box on side panel;
setLastClickedMouseLatLong(LatLong) - Method in class Map.MapRectProjector
 
setLastDataTime(long) - Method in class dataMap.OfflineDataMap
 
setLastDeleteIndex(long) - Method in class PamguardMVC.SaveRequirements
 
setLastDeleteTime(long) - Method in class PamguardMVC.SaveRequirements
 
setLastFocalICIList() - Method in class loc3d_Thode.CrossStationMatcher
 
setLastFocalWithEchoICIList() - Method in class loc3d_Thode.CrossStationMatcher
 
setLastGpsDataUnit(GpsDataUnit) - Method in class radardisplay.RadarDisplay
 
setLastProcTime(long) - Method in class staticLocaliser.realtime.SLNotification
 
setLastSearch(int) - Method in class videoRangePanel.LocationManager
 
setLastUnitWithWhistle(int) - Method in class rocca.RoccaContourDataBlock
 
setLastUpdateIndex(long) - Method in class PamguardMVC.SaveRequirements
 
setLastUpdateTime(long) - Method in class PamguardMVC.PamDataUnit
 
setLastUpdateTime(long) - Method in class PamguardMVC.SaveRequirements
 
setLatestAngle(Double) - Method in class beakedWhaleProtocol.BeakedProcess
 
setLatestClickNoise(ClickDetection) - Method in class rocca.RoccaProcess
 
setLatestOfflineEvent(OfflineEventDataUnit) - Method in class clickDetector.ClickControl
 
setLatitude(double) - Method in class PamUtils.LatLong
 
setLatitude(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setLatitude(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setLatLinesPerDegree(double) - Method in class Map.StraightLineGrid
 
setLatLong(LatLong) - Method in class beakedWhaleProtocol.ShoreStationDataUnit
 
setLatLong() - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setLatLong(int, LatLong) - Method in class Localiser.bearingLocaliser.GroupDetection
 
setLatLong(LatLong) - Method in class loggerForms.LatLongTime
 
setLatLong(LatLong) - Method in class networkTransfer.emulator.EmBuoyStatus
 
setLatLong(LatLong) - Method in class PamUtils.LatLongEditableDialogStrip
Just set the lat long without resetting the heading.
setLatLong(PamDetection, SLResult) - Method in class staticLocaliser.mapping.SLMapping
Geo-references a localisation result.
setLatLong(LatLong) - Method in class staticLocaliser.SLResult
 
setLatLong(LatLong) - Method in class targetMotionModule.TargetMotionResult
 
setLatLong(LatLong) - Method in class targetMotionOld.TargetMotionResult
 
setLatLongDecimalPlaces(int) - Method in class NMEA.NMEAParameters
 
setLatLongOrigin(LatLong) - Method in class videoRangePanel.LandMark
 
setlayerPanelEnabled(boolean) - Method in class staticLocaliser.panels.AbstractLocaliserControl
Enable or disable the panel.
setlayerPanelEnabled(boolean) - Method in class targetMotionModule.panels.AbstractControlPanel
Enable or disable the panel.
setlayerPanelEnabled(boolean) - Method in class targetMotionModule.panels.EventControlPanel
 
setLayout(CornerLayout) - Method in class PamView.JPanelWithPamKey
 
setLED(int, int, int) - Method in class hfDaqCard.SmruDaqJNI
 
setLeftPlotPanel(JComponent) - Method in class Layout.PamAxisPanel
Note that in the case of dual displays, there is no separately-defined inner panel;
setLeftPlotPanel(Component) - Method in class Layout.PamFramePlots
 
setLength(int) - Method in class generalDatabase.PamTableItem
 
setLength(Integer) - Method in class loggerForms.ItemDescription
 
setLengthR(double[]) - Method in class simulatedAcquisition.sounds.RandomQuadratics
 
setLevel(double) - Method in class videoRangePanel.importTideData.TideDataUnit
 
setLineColor(Color) - Method in class PamView.PamDetectionOverlayGraphics
 
setLineColor(Color) - Method in class PamView.PamSymbol
 
setLineColour(Color) - Method in class PamView.PamDetectionOverlayGraphics
 
setLineThickness(float) - Method in class PamView.PamSymbol
 
setLinkGpsData(boolean) - Method in class PamguardMVC.PamDataBlock
 
setListTopic(String) - Method in class generalDatabase.lookupTables.LookupList
 
setLoadCurrent(Double) - Method in class networkTransfer.receive.BuoyStatusDataUnit
 
setLoadProgress(int) - Method in class IMU.IMUImportMananger
 
setLoadStatus(int) - Method in interface PamguardMVC.LoadObserver
 
setLoadStatus(int) - Method in class Spectrogram.SpectrogramDisplay
 
setLoadViewData(boolean) - Method in class generalDatabase.SQLLogging
 
setLocalisation(AbstractLocalisation) - Method in class PamguardMVC.PamDataUnit
 
setLocalisationContents(int) - Method in class PamguardMVC.PamDataBlock
 
setLocalisationRequirements(int) - Method in class PamView.SourcePanel
 
setLocalisationSymbol(TransformGroup) - Method in class staticLocaliser.panels.MapPanel3DSL
 
setLocation(LatLong) - Method in class difar.DIFARCrossingInfo
 
setLocation(Point3d) - Method in class Localiser.timeDelayLocalisers.MCMCTDResults
 
setLocation(LatLong) - Method in class videoRangePanel.importTideData.TideDataUnit
 
setLocations(LatLong, double, LatLong, double, double) - Method in interface propagation.PropagationModel
Set the locations of hydrophone and the source
setLocations(LatLong, double, LatLong, double, double) - Method in class propagation.SphericalPropagation
 
setLocations(LatLong, double, LatLong, double, double) - Method in class propagation.SurfaceEcho
 
setLocatorSettings(LocatorSettings) - Method in class Array.HydrophoneLocator
 
setLocatorSettings(LocatorSettings) - Method in class Array.MasterLocator
This is used a bit differently in the master locator since it's passed null, but will have an array list of settings from when it was deserialized which it must pass on to the other locators.
setLocatorSettings(LocatorSettings) - Method in class Array.StaticHydrophoneLocator
Deprecated.
 
setLocatorSettings(LocatorSettings) - Method in class Array.StraightHydrophoneLocator
 
setLocatorSettings(LocatorSettings) - Method in class Array.Streamer
Set the locator settings.
setLocatorSettings(LocatorSettings) - Method in class networkTransfer.receive.NetworkHydrophoneLocator
Deprecated.
 
setLocContents(int) - Method in class PamDetection.AbstractLocalisation
 
setLockDecimatedData(boolean[][]) - Method in class difar.DifarDataUnit
Set the lock array iformation in the data unit.
setLocTime(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setLocX(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setLocY(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setLocZ(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setLogFFTLength(int) - Method in class clipgenerator.clipDisplay.ClipDisplayParameters
 
setLogFile(File) - Method in class Logging.LogToFlatFile
 
SetLogging(SQLLogging) - Method in class PamguardMVC.PamDataBlock
 
setLoggingActive(boolean) - Method in class Logging.LogDataObserver
 
setLogScale(boolean) - Method in class dataGram.DatagramScaleInformation
 
setLogScale(boolean) - Method in class Layout.PamAxis
 
setLogTenthsScale(boolean) - Method in class Layout.PamAxis
 
setLongitude(double) - Method in class PamUtils.LatLong
 
setLongitude(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setLongitude(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setLongLinesPerDegree(double) - Method in class Map.StraightLineGrid
 
setLookupList(LookupList) - Method in class generalDatabase.lookupTables.LookupComponent
 
setLowResIdiBinScale(int) - Method in class clickDetector.IDI_DisplayParams
Sets the size (along the horizontal axis) of the IDI bins, in milliseconds/bin
setLtsaDataBlock(LtsaDataBlock) - Method in class ltsa.LtsaProcess
 
setLutSpeciesItem(LookupItem) - Method in class difar.DifarDataUnit
 
setMagneticHeading(Double) - Method in class GPS.GpsData
 
setMagneticVariation(Double) - Method in class GPS.GpsData
 
setMainPanel(JPanel) - Method in class PamGraph3D.MouseRightClickMenu
 
setMapCentreCoords(Coordinate3d) - Method in class Map.MapPanel
 
setMapCentreDegrees(LatLong) - Method in class Map.MapPanel
 
setMapCentreDegrees(LatLong) - Method in class Map.MapRectProjector
 
setMapContourPoints(ArrayList<MapContourValues>) - Method in class Map.MapContourGraphics
 
setMapDetectionsParameters(MapDetectionsParameters) - Method in class Map.MapDetectionsManager
 
setMapFileManager(MapFileManager) - Method in class videoRangePanel.ShoreManager
 
setMapLineLength(double) - Method in class whistlesAndMoans.WhistleToneParameters
set lenght of line to be drawn on map
setMapPanelRef(MapPanel) - Method in class Map.MapRectProjector
 
setMapPoints(List<TmapPoint>) - Method in class dataMap.OfflineDataMap
 
setMapRangeMetres(int) - Method in class Map.MapPanel
 
setMapRangeMetres(double) - Method in class Map.MapRectProjector
 
setMapRangeMetres(double) - Method in class Map.StraightLineGrid
 
setMapRotation(double) - Method in class Map.StraightLineGrid
 
setMapRotationDegrees(double) - Method in class Map.Compass
 
setMapRotationDegrees(double) - Method in class Map.MapPanel
 
setMapRotationDegrees(double) - Method in class Map.MapRectProjector
 
setMapZoom(float) - Method in class Map.MapPanel
 
setMasterDevice(int) - Method in class nidaqdev.NIDAQProcess
 
setMatchedPoint(OfflineDataMapPoint) - Method in class dataMap.OfflineDataMapPoint
 
setMatchProgress(int) - Method in class PamUtils.DetectionMatchWorker
 
setMax() - Method in class clickDetector.waveCorrector.WaveCorrector
 
setMax(int) - Method in class PamView.ImportLoadBar
 
setMax(int) - Method in class PamView.PamLoadBar
 
setMaxFrequency(double) - Method in class whistlesAndMoans.WhistleToneParameters
 
setMaxHighCount(int) - Method in class clickDetector.IDI_DisplayParams
Sets the highest histogram count in the high-resolution colour bar
setMaxHighResBin(int) - Method in class clickDetector.IDI_DisplayParams
Sets the highest IDI bin number (horizontal axis) of the high- resolution histogram, in milliseconds
setMaximumAngle(Double) - Method in class difar.DifarDataUnit
 
setMaximumAngleSummary(double[]) - Method in class difar.DifarDataUnit
 
setMaximumFrequency(Double) - Method in class difar.DifarDataUnit
 
setMaxInputs(int) - Method in class asiojni.AsioJniInterface.AsioDriverSettings
 
setMaxLowCount(int) - Method in class clickDetector.IDI_DisplayParams
Sets the highest histogram count in the low-resolution colour bar
setMaxLowResBin(int) - Method in class clickDetector.IDI_DisplayParams
Sets the highest IDI bin number (horizontal axis) of the low- resolution histogram, in milliseconds
setMaxMultiChannelRate(double) - Method in class nidaqdev.NIDeviceInfo
 
setMaxNumber(Short) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setMaxNumber(int) - Method in class PamModel.PamModuleInfo
Set the maximum number of instances of a given module.
setMaxSingleChannelRate(double) - Method in class nidaqdev.NIDeviceInfo
 
setMaxTime(long) - Method in class clickDetector.ClickClassifiers.ClickTypeCommonParams
 
setMaxTimeBin(int) - Method in class clickDetector.IDI_DisplayParams
Sets the highest time bin value to display in the vertical axis
setMaxTotalTriggerLength(int) - Method in class SoundRecorder.trigger.RecorderTriggerData
 
setMaxVal(double) - Method in class dataPlots.data.TDScaleInformation
 
setMaxVal(double) - Method in class Layout.PamAxis
 
setMaxVal(double) - Method in class nidaqdev.Nidaq.DAQmxCreateAIVoltageChanParams
 
setMaxValue(double) - Method in class dataGram.DatagramScaleInformation
 
setMaxValue(String) - Method in class generalDatabase.dataExport.DoubleValueParams
Set the maximum value
setMaxValue(String) - Method in class generalDatabase.dataExport.IntValueParams
Set the maximum value
setMaxValue(String) - Method in class generalDatabase.dataExport.TimeValueParams
Set the maximum value
setMaxValue(String) - Method in class generalDatabase.dataExport.ValueFilterParams
Set the maximum value
setMaxValue(double) - Method in class pamScrollSystem.RangeSpinner
 
setMCMCJumps(ArrayList<ArrayList<Point3f>>) - Method in class targetMotionModule.TargetMotionResult
 
setMCMCJumps(ArrayList<ArrayList<Point3f>>) - Method in class targetMotionOld.TargetMotionResult
 
setMeanChi(double) - Method in class Localiser.timeDelayLocalisers.MCMCTDResults
 
setMeanR(double[]) - Method in class simulatedAcquisition.sounds.RandomQuadratics
 
setMeasuredAmplitude(double, int) - Method in class PamDetection.AcousticDataUnit
 
setMeasuredAmplitude(double) - Method in class PamDetection.AcousticDataUnit
 
setMeasuredAmplitudeType(int) - Method in class PamDetection.AcousticDataUnit
 
setMeasuredAngle(Double) - Method in class beakedWhaleProtocol.ShoreStationDataUnit
 
setMeasuredAnimals(ArrayList<VRMeasurement>) - Method in class videoRangePanel.VRControl
 
setMeasuredValues(double[]) - Method in class angleMeasurement.AngleCalibration
 
setMemory(double) - Method in class clickDetector.TriggerFilter
 
setMenuItem(JMenu) - Method in class PamModel.ModulesMenuGroup
 
setMenuName(String) - Method in class PamModel.ModulesMenuGroup
 
setMessage(String) - Method in class SoundRecorder.trigger.TriggerDecisionMaker
 
setMetaText(ArrayList<String>) - Method in class videoRangePanel.panels.VRMetaDataPanel
 
setMinDetectionCount(int) - Method in class SoundRecorder.trigger.RecorderTriggerData
 
setMinEast(int) - Method in class Layout.PamAxisPanel
 
setMinFrequency(double) - Method in class whistlesAndMoans.WhistleToneParameters
 
setMinGapBetweenTriggers(int) - Method in class SoundRecorder.trigger.RecorderTriggerData
 
setMinimumContourLength(int) - Method in class whistleClassifier.FragmentClassifierParams
 
setMinimumProbability(double) - Method in class classifier.Classifier
 
setMinimumProbability(double) - Method in class whistleClassifier.FragmentClassifierParams
 
setMinimumSize(Dimension) - Method in class PamGraph3D.PamPanel3D.PamCanvas3D
 
setMinNorth(int) - Method in class Layout.PamAxisPanel
 
setMinNumber(Short) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setMinNumber(int) - Method in class PamModel.PamModuleInfo
Set the minumnum number of instances of a particular module.
setMinSouth(int) - Method in class Layout.PamAxisPanel
 
setMinVal(double) - Method in class dataPlots.data.TDScaleInformation
 
setMinVal(double) - Method in class Layout.PamAxis
 
setMinVal(double) - Method in class nidaqdev.Nidaq.DAQmxCreateAIVoltageChanParams
 
setMinValue(double) - Method in class dataGram.DatagramScaleInformation
 
setMinValue(String) - Method in class generalDatabase.dataExport.DoubleValueParams
Set the minimum value
setMinValue(String) - Method in class generalDatabase.dataExport.IntValueParams
Set the minimum value
setMinValue(String) - Method in class generalDatabase.dataExport.TimeValueParams
Set the minimum value
setMinValue(String) - Method in class generalDatabase.dataExport.ValueFilterParams
Set the minimum value
setMinWest(int) - Method in class Layout.PamAxisPanel
 
setMinZoomFactor(double) - Method in class PamGraph3D.MouseProportionalZoom
 
setMiscSymbol(TransformGroup) - Method in class staticLocaliser.panels.MapPanel3DSL
 
setMiscSymbol(BranchGroup) - Method in class staticLocaliser.panels.MapPanel3DSL
Add a Branchgroup to the MiscGroup.
setMixedDirection(int) - Method in class PamguardMVC.PamDataBlock
 
setModality(boolean) - Method in class PamView.hidingpanel.HidingDialogPanel
 
setModel(TargetMotionModel) - Method in class targetMotionModule.TargetMotionResult
 
setModel(TargetMotionModel) - Method in class targetMotionOld.TargetMotionResult
 
setModelList(RoccaRFModel[]) - Method in class rocca.RoccaRFModel
 
setModelName(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setModule(String) - Method in class tipOfTheDay.PamTip
 
setModuleFooter(ModuleFooter) - Method in class binaryFileStorage.BinaryOfflineDataMapPoint
 
setModuleHeader(ModuleHeader) - Method in class binaryFileStorage.BinaryOfflineDataMapPoint
 
setModuleName(String) - Method in class binaryFileStorage.BinaryHeader
 
setModulesMenuGroup(ModulesMenuGroup) - Method in class PamModel.PamModuleInfo
 
setModuleType(String) - Method in class binaryFileStorage.BinaryHeader
 
setMouseTranslate(MouseTranslate) - Method in class PamGraph3D.MouseProportionalZoom
 
setMouseTranslateFactor(double) - Method in class PamGraph3D.PamPanel3D
 
setMouseX(double) - Method in class Map.GpsTextDisplay
 
setMouseY(double) - Method in class Map.GpsTextDisplay
 
setMouseZoom(MouseWheelZoom) - Method in class PamGraph3D.MouseProportionalZoom
 
setMouseZoomFactor(double) - Method in class PamGraph3D.PamPanel3D
 
setMultithreading(boolean) - Method in class PamModel.PamModel
Set multithreading for all of PAMGUARD.
setN(int) - Method in class clickDetector.ClickTemplate
 
setName(String) - Method in class angleMeasurement.AngleMeasurement
 
setName(String) - Method in class clickDetector.ClickAlarm
 
setName(String) - Method in class clickDetector.NewClickOverlayGraphics
 
setName(String) - Method in class eventCounter.DataCounter
 
setName(String) - Method in class fftManager.FFTParameters
 
setName(String) - Method in class generalDatabase.PamTableItem
 
setName(String) - Method in class IshmaelDetector.IshDetParams
 
setName(String) - Method in class IshmaelLocator.IshLocParams
 
setName(String) - Method in class listening.SpeciesItem
 
setName(String) - Method in class NMEA.NMEAParameters
 
setName(String) - Method in class PamController.command.ExtCommand
 
setName(String) - Method in class PamguardMVC.ProcessAnnotation
 
setName(String) - Method in class pamMaths.PamHistogram
 
setName(String) - Method in class PamView.importData.ImportDataSystem
Set the name of this loading system.
setName(String) - Method in class videoRangePanel.LandMark
 
setNaturalLifetime(int) - Method in class PamguardMVC.PamDataBlock
Set the natural lifetime of the data if there are no observers asking to keep it for longer
setNaturalLifetimeMillis(int) - Method in class PamguardMVC.PamDataBlock
 
setNBootstrap(int) - Method in class whistleClassifier.FragmentClassifierParams
 
setNChannels(int) - Method in class Acquisition.AcquisitionParameters
 
setNClicks(int) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setnCyc(short) - Method in class cpod.CPODClick
 
setNDatas(int) - Method in class dataMap.OfflineDataMapPoint
 
setnDatas(int) - Method in class dbht.offline.OfflineDbHtDataUnit
 
setnDatas(int) - Method in class noiseOneBand.offline.OfflineOneBandDataUnit
 
setnDegreesFreedom(Integer) - Method in class staticLocaliser.SLResult
 
setnDegreesFreedom(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setnDegreesFreedom(Integer) - Method in class targetMotionModule.TargetMotionResult
 
setnDegreesFreedom(Integer) - Method in class targetMotionOld.TargetMotionResult
 
setnDeleted(int) - Method in class staticLocaliser.realtime.SLNotification
 
setNeedsUDFSave(boolean) - Method in class loggerForms.FormDescription
 
setNeedsUpdate(boolean) - Method in class binaryFileStorage.DataUnitFileInformation
 
setNetworkControlPort(Integer) - Static method in class PamController.pamBuoyGlobals
 
setNetworkReceiver(NetworkReceiver) - Method in class networkTransfer.receive.BuoyStatusDataUnit
 
setNewClipOrder(boolean) - Method in class clipgenerator.clipDisplay.ClipDisplayParameters
 
setNewError(double) - Method in class Array.EnvironmentPanel
 
setNewFile(String) - Method in class Acquisition.FileInputSystem
Called when user selects a file in the dialog.
setNewSpeed(double) - Method in class Array.EnvironmentPanel
 
setNFragments(int) - Method in class whistleClassifier.WhistleClassificationDataUnit
 
setNiDaqProcess(NIDAQProcess) - Static method in class nidaqdev.Nidaq
 
setNightTime(boolean) - Method in class PamView.ColorSettings
 
setNightTime() - Method in class PamView.PamColors
 
setnInQueue(int) - Method in class staticLocaliser.realtime.SLNotification
 
setNJoinedEnd(int) - Method in class whistlesAndMoans.ConnectedRegion
 
setNJoinedStart(int) - Method in class whistlesAndMoans.ConnectedRegion
 
setNMEAModule(String) - Method in class NMEA.NMEAStringSelector
 
setnObjects(int) - Method in class binaryFileStorage.BinaryFooter
 
setNoiseBandData(double[][]) - Method in class noiseMonitor.NoiseDataUnit
 
setNoiseSensitivity(double) - Method in class rocca.RoccaParameters
 
setNoiseSettings(SpectrogramNoiseSettings) - Method in class spectrogramNoiseReduction.SpectrogramNoiseProcess
 
setNonNonDelays(int) - Method in class staticLocaliser.TDManager
 
setNormalAppearance(LocShape3D) - Method in class staticLocaliser.algorithms.AbstractSLAlgorithm
 
setNormalAppearance(LocShape3D) - Method in class staticLocaliser.algorithms.MarkovChainSL
 
setNormalAppearance(LocShape3D) - Method in interface staticLocaliser.algorithms.SLAlgorithmModel
Set the normal appearance of the locShape.
setNorthAxis(PamAxis) - Method in class Layout.PamAxisPanel
 
setNorthComponent(JComponent) - Method in class clipgenerator.clipDisplay.ClipDisplayUnit
Add a component to the display unit to be inserted into the North of a BorderLayout
setNorthPanel(Component) - Method in class Layout.PamFramePlots
 
setNorthTitle(String) - Method in class generalDatabase.lookupTables.LookupComponent
 
setNotesCruiseID(String) - Method in class rocca.RoccaParameters
 
setNotesDataProvider(String) - Method in class rocca.RoccaParameters
 
setNotesEncounterID(String) - Method in class rocca.RoccaParameters
 
setNotesKnownSpecies(String) - Method in class rocca.RoccaParameters
 
setnPlots(int) - Method in class dataPlots.data.TDScaleInformation
 
setnProcessed(int) - Method in class staticLocaliser.realtime.SLNotification
 
setnTds(int) - Method in class staticLocaliser.TDManager
 
setnTimeDelayPos(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setNTimeDelayPossibilities(Integer) - Method in class staticLocaliser.SLResult
 
setNTimeDelays(Integer) - Method in class staticLocaliser.SLResult
 
setnTimeDelays(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setNull() - Method in class targetMotionModule.panels.EventControlPanel
 
setNull() - Method in interface targetMotionModule.panels.TargetMotionControlPanel
If the current detection has saved localisation data then set it to null i.e.
setNumAdditions(int) - Method in class PamguardMVC.SaveRequirements
 
setNumberOfPlots(int) - Method in class dataPlots.layout.TDGraph
Set the number of plots within the graph.
setNumChannels(int) - Method in class Acquisition.AcquisitionProcess
 
setNumChannels(int, int[]) - Method in class Acquisition.AcquisitionProcess
Set up channels when using a channel list - note that hardware channels are no longer passed through the system so software channels are now used throughout.
setNumChannels(int) - Method in interface Acquisition.ChannelListPanel
Set the total number of channels to display.
setNumChannels(int) - Method in class Acquisition.StandardChannelListPanel
 
setNumChannels(int) - Method in class nidaqdev.NIChannelListPanel
 
setNumDetections(int) - Static method in class rocca.RoccaSpecPopUp
 
setNumFiles(int) - Method in interface offlineProcessing.TaskMonitor
Set the total number of files to process (will be one if only loaded data are being processed).
setNumLatLong(int) - Method in class Localiser.bearingLocaliser.GroupDetection
 
setNumPulses(int) - Method in class smlPingerControl.SMLAsciiCommands
 
setNumPulses(int) - Method in class smlPingerControl.SMLBinaryCommands
 
setNumPulses(int) - Method in interface smlPingerControl.SMLPingerCommands
Set the number of pulses to be transmitted
setNumUpdates(int) - Method in class PamguardMVC.SaveRequirements
 
setNUnits(int) - Method in class angleMeasurement.AngleDataUnit
 
setObserverThread(DetectionMatchWorker) - Method in class PamDetection.AbstractDetectionMatch
Set the observer thread for time delay calculation.
setObserverThread(TMManager.TMInfoWorker) - Method in class targetMotionModule.AbstractTargetMotionInformation
 
setOfflineEventID(int) - Method in class clickDetector.ClickDetection
 
setOfflineFileParameters(OfflineFileParameters) - Method in class Acquisition.offlineFuncs.OfflineFileServer
 
setOfflineParameters(OfflineParameters) - Method in class clickDetector.offlineFuncs.ClicksOffline
 
setOfflineTaskGroup(OfflineTaskGroup) - Method in class offlineProcessing.OfflineTask
 
setOffscreen(boolean) - Method in class PamGraph3D.PamPanel3D
Set an offscreen canvas.
setOffset(long, int) - Method in class Spectrogram.SpectrogramProjector
Set the x and the time offset
setOldestQueuedTime(long) - Method in class staticLocaliser.realtime.SLNotification
 
setOpacity(float) - Method in class PamView.hidingpanel.HidingDialog
 
setOpacity(float) - Method in class PamView.hidingpanel.HidingDialogPanel
 
setOpaque(boolean) - Method in class PamView.hidingpanel.HidingPanel
 
setOrder(int) - Method in class generalDatabase.lookupTables.LookupItem
 
setOriginInterpolation(int) - Method in class Array.PamArray
 
setOriginLatLong(int, GpsData) - Method in class Localiser.bearingLocaliser.GroupDetection
 
setOriginLatLong(GpsData) - Method in class PamguardMVC.PamDataUnit
 
setOriginSettings(OriginSettings) - Method in class Array.Streamer
Set the origin settings.
setOriginSettings(OriginSettings) - Method in class Array.streamerOrigin.GPSOriginMethod
 
setOriginSettings(OriginSettings) - Method in class Array.streamerOrigin.HydrophoneOriginMethod
 
setOriginSettings(OriginSettings) - Method in class Array.streamerOrigin.StaticOriginMethod
 
setOutputFilename(File) - Method in class clickDetector.IDI_DisplayParams
 
setOutputFilename(File) - Method in class WILDInterface.WILDParameters
 
setOverlayDraw(PanelOverlayDraw) - Method in class PamguardMVC.PamObservable
 
setOwner(Object) - Method in class PamguardMVC.ProcessAnnotation
 
setPageStep(int) - Method in class pamScrollSystem.AbstractPamScroller
 
setPaintGhost(boolean) - Method in class PamView.PamTabbedPane
 
setPaintScrollArea(boolean) - Method in class PamView.PamTabbedPane
 
setPairedChannels(int, int, boolean, boolean) - Method in class smlGainControl.SMLGainDialog
 
setPamController(PamController) - Method in class PamController.PamControlledUnit
 
setPamDataBlock(ArrayList<PamDataBlock>) - Method in class staticLocaliser.StaticLocalise
 
setPamDetection(PamDetection) - Method in class staticLocaliser.StaticLocalise
Sets the current PamDetection
setPamguardBranch(String) - Method in class binaryFileStorage.BinaryHeader
 
setPamguardVersion(String) - Method in class binaryFileStorage.BinaryHeader
 
setPamModuleInfo(PamModuleInfo) - Method in class PamController.PamControlledUnit
 
setPamProcess(PamProcess) - Method in class PamguardMVC.ProcessAnnotation
 
setPamStatus(int) - Method in class PamController.PamController
 
setPamSymbol(PamSymbol) - Method in class AIS.AISGraphics
 
setPamSymbol(PamSymbol) - Method in class annotationMark.MarkOverlayDraw
 
setPamSymbol(PamSymbol) - Method in class autecPhones.AutecGraphics
 
setPamSymbol(PamSymbol) - Method in class listening.ListeningEffortGraphics
 
setPamSymbol(PamSymbol) - Method in class listening.ThingHeardGraphics
 
setPamSymbol(PamSymbol) - Method in class networkTransfer.receive.NetworkGPSDrawing
 
setPamSymbol(PamSymbol) - Method in interface PamView.ManagedSymbol
 
setPamSymbol(PamSymbol) - Method in class PamView.PamDetectionOverlayGraphics
 
setPamSymbol(PamSymbol) - Method in class simulatedAcquisition.SimGraphics
 
setPamSymbol(PamSymbol) - Method in class videoRangePanel.VRSymbolManager
 
setPamView(PamView) - Method in class dataMap.DataMapControl
 
setPamView(PamView) - Method in class PamController.PamControlledUnit
Called whenever the frme of a PamControlledunit changes (including at program startup).
setPanelBorder(Insets) - Method in class Layout.DisplayPanel
 
setPanelBorderColour(Color) - Method in class PamView.hidingpanel.TabbedHidingPane
 
setPanelDuration(int) - Method in class ArrayAccelerometer.ArrayAccelPanel
 
setPanelHeight(double) - Method in class Map.MapRectProjector
 
setPanelHeight(int) - Method in class Map.StraightLineGrid
 
setPanelSize(int, int) - Method in class PamView.PamLoadBar
 
setPanelWidth(int) - Method in class clipgenerator.clipDisplay.ClipLayout
 
setPanelWidth(int) - Method in class Map.Compass
 
setPanelWidth(double) - Method in class Map.MapRectProjector
 
setPanelWidth(int) - Method in class Map.StraightLineGrid
 
setPaprob(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setParallelError(int, double) - Method in class Localiser.bearingLocaliser.GroupDetection
 
setParameters() - Method in class clickDetector.IDI_Display
Sets the axes parameters, based on the current IDI_DisplayParams object.
setParams(int[]) - Method in interface Acquisition.ChannelListPanel
Set the channel list.
setParams() - Method in class Acquisition.offlineFuncs.OfflineDAQDialogPanel
 
setParams(int[]) - Method in class Acquisition.StandardChannelListPanel
 
setParams() - Method in class AirgunDisplay.AirgunParametersDialog
 
setParams(AngleLoggingParameters) - Method in class angleMeasurement.AngleLoggingDialogPanel
 
setParams(PamDataUnit) - Method in interface annotation.AnnotationDialogPanel
Set the initial parameter values in the panel.
setParams(PamDataUnit) - Method in class annotation.calcs.snr.SNRAnnotationPanel
 
setParams(PamDataUnit) - Method in class annotation.string.StringDialogPanel
 
setParams() - Method in class Array.ChannelPanel
 
setParams(PamArray) - Method in class Array.HydrophoneDialogPanel
 
setParams() - Method in class Array.InterpolationDialogPanel
 
setParams(PamArray) - Method in interface Array.LocatorDialogPanel
 
setParams() - Method in class beakedWhaleProtocol.BeakedDialog
 
setParams(BinaryStoreSettings) - Method in class binaryFileStorage.BinaryStorageDialogPanel
 
setParams() - Method in class clickDetector.BTAmplitudeSelector
 
setParams() - Method in class clickDetector.ClickClassifiers.basic.BasicIdentifierPanel
 
setParams() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierPanel
 
setParams() - Method in interface clickDetector.ClickClassifiers.ClassifyDialogPanel
 
setParams() - Method in class clickDetector.ClickSpectrumTemplateDialog
 
setParams() - Method in class clickDetector.ClickSpectrumTemplateEditDialog
 
setParams() - Method in class clickDetector.ConcatenatedSpectrogramdialog
 
setParams() - Method in class clickDetector.dataSelector.ClickSelectPanel
 
setParams(ClickParameters) - Method in class clickDetector.dialogs.ClickAlarmDialog
Gets the values from ClickParameters and displays them in the GUI
setParams(ClickParameters) - Method in class clickDetector.dialogs.ClickParamsDialog
 
setParams(ClickParameters) - Method in class clickDetector.dialogs.ClickStorageOptionsDialog
 
setParams() - Method in class clickDetector.echoDetection.JamieEchoDialogPanal
 
setParams() - Method in class clickDetector.echoDetection.SimpleEchoDialogPanel
 
setParams(DataMapParameters) - Method in class dataMap.ScalePanel
 
setParams() - Method in class depthReadout.MccDialog
 
setParams() - Method in class difar.dataSelector.DifarSelectPanel
 
setParams() - Method in class difar.dialogs.DifarParamsDialog.DifarDetectorPanel
 
setParams() - Method in class echoDetector.EchoParametersDialog
 
setParams(FFTFilterParams, float) - Method in class fftFilter.FFTFilter
 
setParams() - Method in class fileOfflineData.OfflineFilesDialogPanel
 
setParams(FilterParams) - Method in class Filters.FilterDialogPanel
 
setParams(int, FilterParams, float) - Method in class Filters.IirfFilter
 
setParams(FilterParams) - Method in class Filters.IirfFilter
Sets parameters then calls stuff to work out all the filter coefficients, etc.
setParams() - Method in class generalDatabase.MSAccessDialogPanel
 
setParams() - Method in class generalDatabase.MySQLDialogPanel
 
setParams() - Method in class generalDatabase.NullDialogPanel
 
setParams() - Method in class generalDatabase.OOoDialogPanel
 
setParams() - Method in interface generalDatabase.SystemDialogPanel
 
setParams() - Method in class GPS.ImportGGADialog
 
setParams() - Method in class GPS.ImportGPSDialog
 
setParams(SmruDaqParameters) - Method in class hfDaqCard.SmruDaqDialogPanel
 
setParams() - Method in class IMU.IMUCalibrationDialog
 
setParams() - Method in class ipiDemo.IpiParametersDialog
 
setParams(LikelihoodDetectionParameters) - Method in class likelihoodDetectionModule.LikelihoodDetectionParametersDialog
Populate the dialog with the values from the persistent parameters.
setParams() - Method in class loc3d_Thode.TowedArray3DParametersDialog
 
setParams(DelayMeasurementParams) - Method in class Localiser.bearingLocaliser.DelayOptionsPanel
 
setParams() - Method in class Localiser.timeDelayLocalisers.LikelihoodSurfaceDialog
 
setParams() - Method in class loggerForms.formdesign.EditControlPanel
 
setParams() - Method in class loggerForms.formdesign.EditPropertyPanel
 
setParams() - Method in class loggerForms.FormPlotOptionsPanel
 
setParams(int[]) - Method in class nidaqdev.NIChannelListPanel
 
setParams(FFTDataBlock) - Method in class noiseMonitor.ResolutionPanel
 
setParams(float, int, int) - Method in class noiseMonitor.ResolutionPanel
 
setParams() - Method in class PamController.NewModuleDialog
 
setParams() - Method in class PamUtils.LatLongEditableDialogStrip
 
setParams() - Method in interface PamView.DialogComponent
Set the parameters in the controls of that component
setParams(GroupedSourceParameters) - Method in class PamView.GroupedSourcePanel
 
setParams() - Method in interface PamView.PamDialogPanel
Set the initial parameter values in the panel.
setParams() - Method in class PamView.PamFilePanel
 
setParams() - Method in class PamView.ViewTimesDialog
 
setParams() - Method in class rocca.RoccaParametersDialog
sets up the labels to be shown in the dialog box, based on the current roccaParameters object
setParams(SerialPortParameters) - Method in class serialComms.SerialPortPanel
 
setParams(SimParameters) - Method in class simulatedAcquisition.SimDialogPanel
 
setParams(SMLGainParameters) - Method in class smlGainControl.SMLGainControl
Called from apply button in dialog to immediately set params.
setParams(SpectrogramParameters, boolean) - Method in class Spectrogram.SpectrogramDisplay
 
setParams(SpectrogramParameters) - Method in class Spectrogram.SpectrogramHidingPanel
 
setParams(Serializable) - Method in class spectrogramNoiseReduction.averageSubtraction.AverageSubtraction
 
setParams() - Method in class spectrogramNoiseReduction.averageSubtraction.AverageSubtractionDialogBits
 
setParams(Serializable) - Method in class spectrogramNoiseReduction.kernelSmoothing.KernelSmoothing
 
setParams() - Method in class spectrogramNoiseReduction.medianFilter.MedianFilterDialogBits
 
setParams(Serializable) - Method in class spectrogramNoiseReduction.medianFilter.SpectrogramMedianFilter
 
setParams() - Method in interface spectrogramNoiseReduction.SpecNoiseDialogComponent
 
setParams(Serializable) - Method in class spectrogramNoiseReduction.SpecNoiseMethod
Set the params for this method - will check class is OK before casting.
setParams(SpectrogramNoiseSettings) - Method in class spectrogramNoiseReduction.SpectrogramNoiseDialogPanel
 
setParams(Serializable) - Method in class spectrogramNoiseReduction.threshold.SpectrogramThreshold
 
setParams() - Method in class spectrogramNoiseReduction.threshold.ThresholdDialogComponent
 
setParams() - Method in class staticLocaliser.panels.ExportDelaysDialog
 
setParams() - Method in class staticLocaliser.panels.OptionsDialog
 
setParams() - Method in class staticLocaliser.panels.UnsyncdataBlocks
 
setParams() - Method in class staticLocaliser.resultsAnalysis.BasicResultFilter
Call this every time the panel is asked for to set params.
setParams(StaticLocaliserParams) - Method in class staticLocaliser.StaticLocaliserControl
 
setParams() - Method in class videoRangePanel.panels.AcceptMeasurementDialog
 
setParams() - Method in class videoRangePanel.panels.LandMarkGroupDialog
 
setParams() - Method in interface videoRangePanel.panels.RangeDialogPanel
 
setParams(FragmentClassifierParams) - Method in class whistleClassifier.ClassifierInfoArea
 
setParams() - Method in class whistleClassifier.training.BatchTrainingDialog
 
setParams() - Method in class whistlesAndMoans.dataSelector.WMDSelectPanel
 
setParams() - Method in class WorkshopDemo.WorkshopParametersDialog
 
setParentComponent(Component) - Method in class PamView.ScrollableBufferedImage
 
setParentDataBlock(PamDataBlock) - Method in class dataMap.OfflineDataMap
 
setParentDataBlock(PamDataBlock) - Method in class IshmaelDetector.IshPeakProcess
 
setParentDataBlock(PamDataBlock) - Method in class IshmaelLocator.IshLocProcess
 
setParentDataBlock(PamDataBlock) - Method in class KernelSmoothing.KernelSmoothingProcess
 
setParentDataBlock(PamDataBlock) - Method in class offlineProcessing.OfflineTask
 
setParentDataBlock(PamDataBlock) - Method in class PamguardMVC.PamDataUnit
 
setParentDataBlock(PamDataBlock) - Method in class PamguardMVC.PamProcess
Set a parent data block with the default options of rethreading if set
setParentDataBlock(PamDataBlock, boolean) - Method in class PamguardMVC.PamProcess
Set a parent data block for the process with the option to rethread the data exchange process.
setParentDataBlock(FFTDataBlock) - Method in class spectrogramNoiseReduction.SpectrogramNoiseProcess
 
setParentDetection(PamDetection) - Method in class difar.DifarDataUnit
 
setParentDetection(PamDetection) - Method in class PamDetection.AbstractLocalisation
 
setParentDetections(PamDataBlock) - Method in class PamDetection.AbstractDetectionMatch
Set Pamdatablock
setParity(int) - Method in class portcomms.SerialPortParameters
 
setParity(int) - Method in class serialComms.SerialPortPanel
 
setParmeterType(int, GeneralProjector.ParameterType) - Method in class PamView.GeneralProjector
Sets the parameter type for a specific data type required by Coordinate3d
setParmeterUnits(int, GeneralProjector.ParameterUnits) - Method in class PamView.GeneralProjector
Sets the parameter unit for a specific data type required by Coordinate3d
setPartData(int, Double) - Method in class decimus.summarystring.DStrModulePartInfo
Set a specific parts data.
setPartPlot(int, boolean) - Method in class decimus.summarystring.DStrModulePartInfo
Set that a specific part should be plotted.
setPeakFreq(double) - Method in class rocca.RoccaContourDataUnit
 
setPeakHeight(double) - Method in class PamDetection.IshDetection
 
setPeakPeak(double) - Method in class dbht.DbHtDataUnit
 
setPeakPeak(double) - Method in class noiseOneBand.OneBandDataUnit
 
setPeakTime(double) - Method in class PamDetection.PamDetection
 
setPerpDist(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setPerpdistErr(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setPerpendicularDistance(Double) - Method in class targetMotionModule.TargetMotionResult
 
setPerpendicularDistance(Double) - Method in class targetMotionOld.TargetMotionResult
 
setPerpendicularDistanceError(Double) - Method in class targetMotionModule.TargetMotionResult
 
setPerpendicularDistanceError(Double) - Method in class targetMotionOld.TargetMotionResult
 
setPerpendicularError(int, double) - Method in class Localiser.bearingLocaliser.GroupDetection
 
setPhones(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setPingFrequency(int) - Method in class smlPingerControl.SMLAsciiCommands
 
setPingFrequency(int) - Method in class smlPingerControl.SMLBinaryCommands
 
setPingFrequency(int) - Method in interface smlPingerControl.SMLPingerCommands
Sets the Pinger Output Frequency selection
setPitch(Double) - Method in class angleMeasurement.AngleDataUnit
 
setPitch(Double) - Method in class Array.Streamer
 
setPitch(Double) - Method in class GPS.GpsData
Hydrophone pitch in degrees, +ve means that the front of the hydrophone is up, -ve is down.
setPitch(Double) - Method in class videoRangePanel.LandMark
 
setPixelsPerMetre(double) - Method in class Map.MapPanel
 
setPixelsPerMetre(double) - Method in class Map.MapRectProjector
 
setPixelsPerMetre(double) - Method in class Map.StraightLineGrid
 
setPixelsPerMetre(double) - Method in class Map.Vessel
 
setPlaybackChannels(int[]) - Method in class asiojni.AsioJniInterface
 
setPlotAxis() - Method in class Localiser.timeDelayLocalisers.MCMCPanel.ChiGraphAxis
 
setPlotControl(int, boolean) - Method in class loggerForms.FormPlotOptions
 
setPlotControl(int, int, boolean) - Method in class loggerForms.FormPlotOptions
 
setPlotPanel(JComponent) - Method in class Layout.PamAxisPanel
 
setPlotPanel(Component) - Method in class Layout.PamFramePlots
 
setPlotPanel(JPanel) - Method in class performanceTests.PerformanceWindow
 
setPlotThing(String, String, int) - Method in class decimus.summarystring.DStrParameters
 
setPointingVectors(PamVector[][]) - Method in class simulatedAcquisition.sounds.SimSound
 
setPort(String) - Method in class serialComms.SerialPortPanel
 
setPosition(int, int, int, int) - Method in class Layout.PamAxis
Set the axis default coordinates
setPosition(LatLong) - Method in class videoRangePanel.LandMark
 
setPosition(long) - Method in class wavFiles.WavFile
Set the file pointer at a specific sample.
setPrdb(PamRawDataBlock) - Method in class rocca.RoccaContourDataBlock
 
setPreamplifier(Preamplifier) - Method in class Acquisition.AcquisitionParameters
 
setPredictionArrow(int) - Method in class Map.Vessel
 
setPreferredBorderColour(Color, int) - Method in class PamView.PamPanel
Override the preferred (black and red) colours for any border included in in the panel.
setPreferredSize(Dimension) - Method in class Map.GpsTextDisplay
 
setPreferredSize(Dimension) - Method in class PamGraph3D.PamPanel3D.PamCanvas3D
 
setPreMarkSeconds(double) - Method in class difar.DifarDataUnit
 
setPressed(boolean) - Method in class SoundRecorder.RecorderButton
 
setPrevTime(long) - Method in class clickDetector.ClickClassifiers.ClickTypeCommonParams
 
setPrimaryDataBlock(PamDataBlock) - Method in class offlineProcessing.OfflineTaskGroup
 
setPrimaryKey(boolean) - Method in class generalDatabase.PamTableItem
 
setPrintJobName(String) - Method in class PamView.ClipboardCopier
 
setProbability(Double) - Method in class staticLocaliser.SLResult
 
setProbability(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setProbability(Double) - Method in class targetMotionModule.TargetMotionResult
 
setProbability(Double) - Method in class targetMotionOld.TargetMotionResult
 
setProcessName(String) - Method in class PamguardMVC.PamProcess
 
setProgress(FileMapProgress) - Method in class Acquisition.offlineFuncs.FileMapMakingdialog
 
setProgress(BinaryMapMakeProgress) - Method in class binaryFileStorage.BinaryMapMakingDialog
 
setProgress(int, int, int, int) - Method in interface clickDetector.offlineFuncs.rcImport.DBConvertProgress
 
setProgress(int, int, int, int) - Method in class clickDetector.offlineFuncs.rcImport.RainbowDatabaseConversion
 
setProgress(int, boolean, boolean) - Method in class difar.demux.NativeDemux
Used as a callback from the jni to pass back status data from the demultiplexing process.
setProgress(OfflineMapProgress) - Method in class fileOfflineData.OfflineFileProgressDialog
 
setProgress(EmulationProgress) - Method in class nmeaEmulator.InfoPanel
 
setProgress(EmulationProgress) - Method in class nmeaEmulator.NMEAOutdialog
 
setProgress(int, double) - Method in interface offlineProcessing.TaskMonitor
Set the overall task progress
setProgress(int) - Method in class PamView.ImportLoadBar
 
setProgress(int) - Method in class PamView.PamLoadBar
 
setProgress(int, long, double) - Method in interface soundPlayback.PlaybackProgressMonitor
Notify progress during playback in viewer mode.
setProgress(int) - Method in interface whistleClassifier.training.ProgressInformation
 
setProgressLimits(int, int) - Method in interface whistleClassifier.training.ProgressInformation
 
setPropagationModel(PropagationModel) - Method in class simulatedAcquisition.SimProcess
 
setProperty(String, Object) - Method in class loggerForms.ItemInformation
Set a property in the property table.
setProportionalityFactor(double) - Method in class PamGraph3D.MouseProportionalZoom
 
setPulseOnAndRepRate(int, int) - Method in class smlPingerControl.SMLAsciiCommands
 
setPulseOnAndRepRate(int, int) - Method in class smlPingerControl.SMLBinaryCommands
 
setPulseOnAndRepRate(int, int) - Method in interface smlPingerControl.SMLPingerCommands
Changes the Pulse On Period and Pulse Repetition Rate to the range checked values specified by tensMicros and tenthsSeconds respectively
setPulseOnPeriod(int) - Method in class smlPingerControl.SMLAsciiCommands
 
setPulseOnPeriod(int) - Method in class smlPingerControl.SMLBinaryCommands
 
setPulseOnPeriod(int) - Method in interface smlPingerControl.SMLPingerCommands
Changes the Pulse on period to the range checked value specified
setPulseRepRate(int) - Method in class smlPingerControl.SMLAsciiCommands
 
setPulseRepRate(int) - Method in class smlPingerControl.SMLBinaryCommands
 
setPulseRepRate(int) - Method in interface smlPingerControl.SMLPingerCommands
Changes the Pulse Repetition Rate to the range checked value specified
setRadarParameters(RadarParameters) - Method in class radardisplay.RadarProjector
 
setRange(double, double) - Method in class Layout.PamAxis
Set the minimum and maximum values for the axis.
setRange(int, double) - Method in class Localiser.bearingLocaliser.GroupDetection
 
setRange(double) - Method in class Localiser.timeDelayLocalisers.MCMCTDResults
 
setRange(int) - Method in class mcc.MccPanel
 
setRange(double, int) - Method in class PamDetection.PamLocalisation
Deprecated.
 
setRange(double, double, int) - Method in class pamMaths.PamHistogram
Sets the histogram bin ranges.
setRange(Double) - Method in class staticLocaliser.SLResult
 
setRange(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setRangeColour(Color) - Method in class PamView.sliders.PamRangeSlider
 
setRangeErr(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setRangeError(double) - Method in class Localiser.timeDelayLocalisers.MCMCTDResults
 
setRangeError(Double) - Method in class staticLocaliser.SLResult
 
setRangeMethods(VRHorzMethods) - Method in class videoRangePanel.VRControl
 
setRangeMillis(long, long, boolean) - Method in class pamScrollSystem.AbstractPamScroller
Set the range of the currently loaded data and optionally notify other scrollers.
setRanges(double[]) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setRanges(double, int) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setRangeSliderColour(Color) - Method in class PamView.sliders.PamRangeSliderUI
 
setRate(double) - Method in class nidaqdev.Nidaq.DAQmxCfgSampClkTimingParams
 
setRawAngle(Double) - Method in class angleMeasurement.AngleDataUnit
 
setRawData(double[][]) - Method in class clipgenerator.ClipDataUnit
 
setRawdata(double[]) - Method in class loc3d_Thode.GroupDetDataUnit
 
setRawData(double[]) - Method in class PamDetection.RawDataUnit
 
setRawData(double[], boolean) - Method in class PamDetection.RawDataUnit
 
setRawDepthData(double[]) - Method in class depthReadout.DepthDataUnit
 
setRecordActive(boolean) - Method in class asiojni.AsioJniInterface
 
setRecorderStatus(int) - Method in class SoundRecorder.RecorderControl
 
setRecordingInfo(RecordingInfo) - Method in class SoundRecorder.RecorderDataUnit
 
setRecordingTrigger(RecorderTrigger) - Method in class PamguardMVC.PamDataBlock
 
setRectProj(MapRectProjector) - Method in class Map.MapPanel
 
setRecycle(boolean) - Method in class fftManager.FFTDataBlock
 
setRecycling(boolean) - Method in class PamguardMVC.PamDataBlock
 
setRecyclingStoreLength(int) - Method in class PamguardMVC.PamDataBlock
 
setReferenceBearing(double) - Method in class clickDetector.ClickTrainLocalisation
 
setReferenceChannels(int, int) - Method in class Localiser.bearingLocaliser.GroupDetection
 
setReferenceHeading(int, double) - Method in class Localiser.bearingLocaliser.GroupDetection
 
setReferenceHeading(Double) - Method in class staticLocaliser.SLResult
 
setReferenceHydrophone(Integer) - Method in class staticLocaliser.SLResult
 
setReferenceHydrophone(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setReferenceHydrophones(int) - Method in class PamDetection.AbstractLocalisation
 
setReferenceHydrophones(int) - Method in class targetMotionModule.TargetMotionResult
 
setReferenceHydrophones(int) - Method in class targetMotionOld.TargetMotionResult
 
setReferenceLatLong(LatLong) - Method in class staticLocaliser.SLResult
 
setRefHeading(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setRefLatitude(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setRefLongitude(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setRepeatCount(int) - Method in class Layout.RepeatedAxis
 
setRequired(boolean) - Method in class generalDatabase.PamTableItem
 
setResponse(double[], double[], int, double) - Method in class Filters.FIRArbitraryFilter
Set the filter response.
setResults(ArrayList<SLResult>) - Method in class staticLocaliser.StaticLocalise
 
setReturnedMeasure(int) - Method in class noiseOneBand.OneBandAlarmParameters
 
setRightPlotPanel(JComponent) - Method in class Layout.PamAxisPanel
Note that in the case of dual displays, there is no separately-defined inner panel;
setRightPlotPanel(Component) - Method in class Layout.PamFramePlots
 
setRms(double) - Method in class dbht.DbHtDataUnit
 
setRms(double) - Method in class noiseOneBand.OneBandDataUnit
 
setRmsAmplitude() - Method in class whistlesAndMoans.SliceData
 
setRoccaClassifier2ModelFilename(File) - Method in class rocca.RoccaParameters
 
setRoccaClassifierModel(AbstractClassifier) - Method in class rocca.RoccaRFModel
 
setRoccaClassifierModelFilename(File) - Method in class rocca.RoccaParameters
 
setRoll(Double) - Method in class Array.Streamer
 
setRoll(Double) - Method in class GPS.GpsData
Hydrophone roll in degrees, +ve is roll to the left, -ve to the right.
setRot(Transform3D, Vector3f, Vector3f) - Static method in class PamGraph3D.Pam3DUtils
Rotates an object from zAxis to unit vector direction.
setRowHeight(int) - Method in class likelihoodDetectionModule.TreeTable
Overridden to pass the new rowHeight to the tree.
setRowHeight(int) - Method in class likelihoodDetectionModule.TreeTable.TreeTableCellRenderer
Sets the row height of the tree, and forwards the row height to the table.
setRunMethod(int, boolean) - Method in class spectrogramNoiseReduction.SpectrogramNoiseSettings
 
setRunMode(int) - Method in class smlPingerControl.SMLPingerControl
Called from the side panel when a new run mode is selected
setRunMode(int) - Method in class smlPingerControl.SMLPingerParams
 
setRunOnAdd(boolean) - Method in class Localiser.bearingLocaliser.AbstractLocaliser
 
setRunOnUpdate(boolean) - Method in class Localiser.bearingLocaliser.AbstractLocaliser
 
setRunTimeMillis(Long) - Method in class staticLocaliser.SLResult
 
setRunTimeMillis(Double) - Method in class targetMotionModule.TargetMotionResult
 
setRunTimeMillis(Double) - Method in class targetMotionOld.TargetMotionResult
 
setSampleMode(int) - Method in class nidaqdev.Nidaq.DAQmxCfgSampClkTimingParams
 
setSampleRate(float) - Method in class Acquisition.AcquisitionDialog
Called by the specific DaqSystem to set sample rate when it is set by the DaqSystem (for instance FileInputSystem will set sample rate to the sample rate of data in the current file.
setSampleRate(float) - Method in class Acquisition.AcquisitionParameters
 
setSampleRate(float, boolean) - Method in class Acquisition.AcquisitionProcess
 
setSampleRate(float, boolean) - Method in class Array.ArrayManager
 
setSampleRate(float, boolean) - Method in class Array.StraightHydrophoneLocator
 
setSampleRate(int) - Method in class asiojni.AsioJniInterface.AsioDriverSettings
 
setSampleRate(float, boolean) - Method in class beakedWhaleProtocol.BeakedLocationDialog
 
setSampleRate(float, boolean) - Method in class clickDetector.BinaryClickProcess
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickBTDisplay
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickDetector
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickSidePanel
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickSpectrum
 
setSampleRate(float) - Method in class clickDetector.ClickTemplate
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickTrainDetector
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickTrigger
 
setSampleRate(float, boolean) - Method in class clickDetector.ClickWaveform
 
setSampleRate(float, boolean) - Method in class clickDetector.IDI_Display
 
setSampleRate(float) - Method in class clipgenerator.clipDisplay.ClipDisplayPanel
 
setSampleRate(float, boolean) - Method in class clipgenerator.ClipProcess.ClipBlockProcess
 
setSampleRate(float, boolean) - Method in class decimator.DecimatorProcess
 
setSampleRate(float, boolean) - Method in class depthReadout.DepthSidePanel
 
setSampleRate(float, boolean) - Method in class envelopeTracer.EnvelopeProcess
 
setSampleRate(float, boolean) - Method in class eventCounter.DataCounter
 
setSampleRate(float, boolean) - Method in class fftManager.FFTPluginPanelProvider.FFTPluginPanel
 
setSampleRate(float) - Method in class Filters.FilterDialogPanel
 
setSampleRate(double) - Method in class Filters.FilterMethod
 
setSampleRate(float, boolean) - Method in class GPS.ProcessNmeaData
 
setSampleRate(float, boolean) - Method in class GPS.UpdateClockDialog
 
setSampleRate(float, boolean) - Method in class ipiDemo.IpiPluginPanelProvider.IpiPluginPanel
 
setSampleRate(float, boolean) - Method in class IshmaelDetector.IshDetFnProcess
This is called when the sample rate changes.
setSampleRate(float, boolean) - Method in class IshmaelDetector.IshDetSave
 
setSampleRate(float, boolean) - Method in class IshmaelDetector.IshPeakProcess
 
setSampleRate(float, boolean) - Method in class levelMeter.LevelMeterSidePanel
 
setSampleRate(float, boolean) - Method in class likelihoodDetectionModule.linearAverageSpectra.LinearAverageSpectraProcess
 
setSampleRate(float, boolean) - Method in class likelihoodDetectionModule.normalizer.NormalizerProcess
 
setSampleRate(float, boolean) - Method in class likelihoodDetectionModule.spectralEti.SpectralEtiProcess
 
setSampleRate(float, boolean) - Method in class likelihoodDetectionModule.thresholdDetector.ThresholdDetectorProcess
 
setSampleRate(float) - Method in class Localiser.timeDelayLocalisers.MCMC
 
setSampleRate(float) - Method in class Localiser.timeDelayLocalisers.Simplex
 
setSampleRate(float, boolean) - Method in class loggerForms.FormsAlertSidePanel
 
setSampleRate(float, boolean) - Method in class Logging.LogDataObserver
 
setSampleRate(float, boolean) - Method in class Map.MapPanel
 
setSampleRate(float, boolean) - Method in class Map.SimpleMap
 
setSampleRate(float, boolean) - Method in class NMEA.AcquireNmeaData
 
setSampleRate(float, boolean) - Method in class PamController.masterReference.GPSDataSystem
 
setSampleRate(float, boolean) - Method in class PamguardMVC.PamDataBlock
Sets the sample rate for the block (e.g.
setSampleRate(float, boolean) - Method in interface PamguardMVC.PamObserver
New sample rate
setSampleRate(float, boolean) - Method in class PamguardMVC.PamObserverAdapter
 
setSampleRate(float, boolean) - Method in class PamguardMVC.PamProcess
 
setSampleRate(float, boolean) - Method in class PamguardMVC.RawDataDisplay.RawDisplayPanel
 
setSampleRate(float, boolean) - Method in class PamguardMVC.ThreadedObserver
 
setSampleRate(float, boolean) - Method in class patchPanel.PatchPanelProcess
 
setSampleRate(float, boolean) - Method in class radardisplay.RadarDisplay
 
setSampleRate(float, boolean) - Method in class rocca.RoccaSidePanel
 
setSampleRate(float, boolean) - Method in class seismicVeto.VetoPluginPanelProvider.VetoPluginPanel
 
setSampleRate(float, boolean) - Method in class serialPortLogger.SerialDisplayTable
 
setSampleRate(float, boolean) - Method in class soundPlayback.PlaybackProcess
 
setSampleRate(float, boolean) - Method in class SoundRecorder.RecorderProcess
 
setSampleRate(float, boolean) - Method in class Spectrogram.SpectrogramDisplay
 
setSampleRate(float) - Method in class whistleClassifier.BasicFragmentStore
 
setSampleRate(float, boolean) - Method in class whistleClassifier.ClassifierHistoryWindow
 
setSampleRate(float) - Method in class whistleClassifier.FragmentClassifierParams
 
setSampleRate(float) - Method in class whistleClassifier.HistoFragmentStore
 
setSampleRate(float) - Method in class whistleClassifier.training.TrainingDataSet
 
setSampleRate(float) - Method in class whistleClassifier.TrainingDataSet
 
setSampleRate(float, boolean) - Method in class whistleClassifier.WhistleClassifierProcess
 
setSampleRate(float, boolean) - Method in class whistleDetector.PeakDetector
 
setSampleRate(float, boolean) - Method in class whistleDetector.WhistleDetector
 
setSampleRate(float, boolean) - Method in class whistleDetector.WhistleSidePanel
 
setSampleRate(float, boolean) - Method in class WILDInterface.WILDSidePanel
 
setSampleRate(float, boolean) - Method in class WorkshopDemo.WorkshopPluginPanelProvider.WorkshopPluginPanel
 
setSampleRateIndex(int, int) - Method in class hfDaqCard.SmruDaqJNI
 
setSampleRateIndex(int) - Method in class hfDaqCard.SmruDaqParameters
 
setSamplesPerChannel(int) - Method in class nidaqdev.Nidaq.DaqConfig
 
setSamplesPerChannel(int) - Method in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
setSampsPerChanRead(int) - Method in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
setSampsPerChanToAcquire(long) - Method in class nidaqdev.Nidaq.DAQmxCfgSampClkTimingParams
 
setSaveOutput(boolean) - Method in class clickDetector.IDI_DisplayParams
 
setSaveOutput(boolean) - Method in class WILDInterface.WILDParameters
 
setScales(double, double, double, double, double, double) - Method in class Map.MapProjector
 
setScales(double, double, double, double, double, double) - Method in class Map.MapRectProjector
 
setScales(double, double, int, int) - Method in class Spectrogram.SpectrogramProjector
 
setScore(float) - Method in class loc3d_Thode.GroupDetDataUnit
 
setScore(Double) - Method in class xBatLogViewer.XBatLogDataUnit
 
setScrollerCoupling(ScrollerCoupling) - Method in class pamScrollSystem.AbstractPamScroller
 
setSearchEndHz(double) - Method in class whistleDetector.WhistleParameters
 
setSearchStartHz(double) - Method in class whistleDetector.WhistleParameters
 
setSecondsAfterTrigger(double) - Method in class SoundRecorder.trigger.RecorderTriggerData
 
setSecondsBeforeTrigger(double) - Method in class SoundRecorder.trigger.RecorderTriggerData
 
setSecondsBetweenDetections(double) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the seconds between detections.
setSectionLength(int) - Method in class whistleClassifier.FragmentClassifierParams
 
setSEL(double, int) - Method in class noiseOneBand.OneBandDataUnit
Set sound exposure level measured over many data units.
setSelectable(boolean) - Method in class generalDatabase.lookupTables.LookupItem
 
setSelectData(int, boolean) - Method in class noiseMonitor.NoiseDisplaySettings
 
setSelected(boolean) - Method in class Acquisition.DaqSystem
Tell a DAQ system it's been selected or deselected.
setSelected(boolean) - Method in class likelihoodDetectionModule.CheckRenderer.TreeLabel
Sets the selected.
setSelected(boolean) - Method in class simulatedAcquisition.SimProcess
 
setSelected(boolean) - Method in class SoundRecorder.RecorderButton
 
setSelected(boolean) - Method in class spectrogramNoiseReduction.averageSubtraction.AverageSubtractionDialogBits
 
setSelected(boolean) - Method in class spectrogramNoiseReduction.medianFilter.MedianFilterDialogBits
 
setSelected(boolean) - Method in interface spectrogramNoiseReduction.SpecNoiseDialogComponent
Called when the "Run this method" is checked or unchecked.
setSelected(boolean) - Method in class spectrogramNoiseReduction.threshold.ThresholdDialogComponent
 
setSelected(boolean) - Method in class staticLocaliser.algorithms.AbstractSLAlgorithm
 
setSelected(boolean) - Method in interface staticLocaliser.algorithms.SLAlgorithmModel
Called whenever an algorithm is selected or deselected.
setSelectedAlgorithm(int) - Method in class staticLocaliser.algorithms.MimplexAlgorithms
 
setSelectedAngle(Double) - Method in class difar.DifarDataUnit
Set the selected angle from the DIFARGram.
setSelectedChannels(int) - Method in class likelihoodDetectionModule.LikelihoodDetectionParameters
Sets the channels that are to be used from the audio data source.
setSelectedClick(ClickDetection) - Method in class clickDetector.ClickBTDisplay
 
setSelectedCode(String) - Method in class generalDatabase.lookupTables.LookupComponent
Set the code manually, then let the comboBox part update itself
setSelectedColourMap(ColourArray.ColourArrayType) - Method in class PamView.ColourComboBox
 
setSelectedDataUnits(ArrayList<FoundDataUnit>) - Method in class dataPlots.layout.TDGraph
Set selected data units for the graph.
setSelectedEvent(OfflineEventDataUnit) - Method in class clickDetector.offlineFuncs.OfflineEventListPanel
 
setSelectedEvents(ArrayList<OfflineEventDataUnit>) - Method in class clickDetector.offlineFuncs.OfflineEventListPanel
 
setSelectedFont(Font) - Method in class PamView.JFontChooser
Set the selected font.
setSelectedFontFamily(String) - Method in class PamView.JFontChooser
Set the family name of the selected font.
setSelectedFontSize(int) - Method in class PamView.JFontChooser
Set the size of the selected font.
setSelectedFontStyle(int) - Method in class PamView.JFontChooser
Set the style of the selected font.
setSelectedFrequency(Double) - Method in class difar.DifarDataUnit
 
setSelectedStats(int) - Method in class pamMaths.HistogramDisplay
 
setSelectedString(String) - Method in class NMEA.NMEAStringSelector
Set the selected NMEA string
setSelectedTitle(ControlTitle) - Method in class loggerForms.formdesign.FormEditDialog
 
setSelection(int) - Method in class Array.InterpolationDialogPanel
 
setSendGeneralSettingsNotification(boolean) - Method in class PamView.PamDialog
Tell the Pamguard Controller to send a notification message around ALL program modules, processes and data blocks indicating that some settings have changed.
setSensorId(int) - Method in class d3.D3SensorInfo
 
setSerialData(String) - Method in class serialPortLogger.SerialDataUnit
 
setSerialOutputParameters(NMEAParameters) - Method in class nmeaEmulator.SerialOutput
 
setSerialPortName(String) - Method in class WILDInterface.WILDParameters
 
setSessionStartTime(long) - Static method in class PamUtils.PamCalendar
 
setSettings(Window) - Method in class alarm.actions.ActionSendEmail
 
setSettings(Window) - Method in class alarm.actions.AlarmAction
Open an action specific dialog to configure the action
setSettings(Window) - Method in class alarm.actions.serial.AlarmSerialAction
 
setSettings(Window) - Method in class alarm.actions.serial.AlarmSerialInterface
 
setSettings(Window) - Method in class alarm.actions.sound.PlaySound
 
setSettings(Object) - Method in class PamController.PamControlledUnitSettings
 
setSettings() - Method in class Spectrogram.SpectrogramDisplay
 
setSettingsStrip(SettingsStrip) - Method in class dataMap.DataMapLayout
 
setSettingsTime(long) - Method in class PamController.PamSettingsGroup
 
setShipColor(Color) - Method in class Map.Vessel
 
setShipGps(GpsData) - Method in class Map.Vessel
 
setShipOutline() - Method in class Map.Vessel
 
setShortName(String) - Method in class eventCounter.DataCounter
 
setShortName(String) - Method in class eventCounter.EventCounterSidePanel
 
setShouldBinary(boolean) - Method in class PamguardMVC.PamDataBlock
Set flag to say if data should be stored in the binary store.
setShouldLog(boolean) - Method in class PamguardMVC.PamDataBlock
Set if data should be logged to the database.
setShouldPlot(boolean) - Method in class clickDetector.ClickTrainDetection
 
setShouldPlot(String, boolean) - Method in class Map.MapDetectionsManager
 
setShouldPlot(PamDataBlock, boolean) - Method in class Map.MapDetectionsManager
 
setShowAtStart(boolean) - Method in class tipOfTheDay.TipOfTheDayManager
 
setShowControlPanel(boolean) - Method in class dataPlots.TDControl
Set whether the graphs has a control panel, allowing panels etc to be added.
setShowDetector(int, int, boolean) - Method in class Spectrogram.SpectrogramParameters
 
setShowGraphLabels(boolean) - Method in class dataPlots.TDControl
Set whether graphs within the display show their label.
setShowing(boolean) - Method in class dataPlots.data.TDDataInfo
Set whether or not it's showing in current graph window.
setShowSelection(int) - Method in class clickDetector.offlineFuncs.OfflineEventListPanel
 
setShowSpecies(int, boolean) - Method in class clickDetector.BTDisplayParameters
 
setShowStandard(int, boolean) - Method in class noiseBandMonitor.NoiseBandSettings
 
setShowStats(boolean) - Method in class pamMaths.HistogramDisplay
 
setShowTimes(boolean) - Method in class pamScrollSystem.PamScroller
 
setShowTopLabel(boolean) - Method in class dataPlots.layout.TDGraph
Set whether to show a top label for this graph.
setSide(int) - Method in class targetMotionModule.TargetMotionResult
 
setSide(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setSide(int) - Method in class targetMotionOld.TargetMotionResult
 
setSidePanel(PamSidePanel) - Method in class PamController.PamControlledUnit
Sets the side panel for the PamControlledUnit Side panels are shown down the left hand side of the main Pamguard GUI and are always visible, irrespective of which tab is being viewed on the main tabbed display.
setSightClass(String) - Method in class rocca.RoccaSightingDataUnit
Sets the sighting classification to the passed string
setSightingNum(String) - Method in class rocca.RoccaLoggingDataUnit
 
setSightingSaved(boolean) - Method in class rocca.RoccaSightingDataUnit
 
setSightingThreshold(int) - Method in class rocca.RoccaParameters
 
setSightNum(String) - Method in class rocca.RoccaSightingDataUnit
 
setSignalBands(ArrayList<SignalBand>) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the signal bands.
setSimObject(SimObject) - Method in class simulatedAcquisition.SimObjectDataUnit
 
setSimpleMapRef(SimpleMap) - Method in class Map.MapPanel
 
setSimSignal(SimSignal) - Method in class simulatedAcquisition.SimObjectDataUnit
 
setSimSignal() - Method in class simulatedAcquisition.SimObjectDataUnit
 
setSingleClickSave(boolean) - Method in class difar.DifarParameters
 
setSingleInstance(MCMCParamsDialog) - Static method in class Localiser.timeDelayLocalisers.MCMCParamsDialog
 
setSingleInstance(MCMCParamsDialogHM) - Static method in class Localiser.timeDelayLocalisers.MCMCParamsDialogHM
 
setSize(Dimension) - Method in class Map.GpsTextDisplay
 
setSize(int, int) - Method in class Map.GpsTextDisplay
 
setSize(Dimension) - Method in class PamGraph3D.PamPanel3D.PamCanvas3D
 
setSizingComponent(JComponent) - Method in class PamView.hidingpanel.HidingDialogPanel
 
setSlope(short) - Method in class cpod.CPODClick
 
setSlope(double) - Method in class rocca.RoccaContourDataUnit
 
setSlopeR(double[]) - Method in class simulatedAcquisition.sounds.RandomQuadratics
 
setSnr(double) - Method in class annotation.calcs.snr.SNRAnnotation
 
setSocket(Socket) - Method in class networkTransfer.receive.BuoyStatusDataUnit
 
setSoundAmplitude(double[]) - Method in class simulatedAcquisition.sounds.SimSound
 
setSoundData(float, int, int) - Method in class RightWhaleEdgeDetector.RWStandardClassifier
 
setSoundFile(File) - Method in class Acquisition.offlineFuncs.WavFileDataMapPoint
 
setSoundFile(boolean) - Static method in class PamUtils.PamCalendar
 
setSoundFileTimeInMillis(long) - Static method in class PamUtils.PamCalendar
 
setSoundSpeed(double) - Method in class Localiser.timeDelayLocalisers.MCMC
 
setSoundSpeed(double) - Method in class Localiser.timeDelayLocalisers.Simplex
 
setSource(String) - Method in class Acquisition.RawSourceDialogPanel
 
setSource(String) - Method in class PamView.SourcePanel
Set the current data source using the data source name
setSource(PamDataBlock) - Method in class PamView.SourcePanel
Set the current data source by block reference
setSource(PamDataBlock) - Method in class spectrogramNoiseReduction.SpectrogramNoiseDialogPanel
 
setSourceData(PamDataBlock) - Method in class eventCounter.DataCounter
 
setSourceIndex(int) - Method in class PamView.SourcePanel
 
setSourceList() - Method in class PamView.SourcePanel
Fill the list of available data sources, taking into account the list of excluded sources
setSourceList(boolean) - Method in class PamView.SourcePanel
 
setSourceName(String) - Method in class likelihoodDetectionModule.LikelihoodDetectionParameters
Sets the source name for the audio data source (acquisition) to be used.
setSourcePanel(SourcePanel) - Method in class spectrogramNoiseReduction.SpectrogramNoiseDialogPanel
Set a source panel so that the dialog panel can respond to source changes.
setSourceToolTip(String) - Method in class PamView.SourcePanel
Set a tooltip text for the source panel.
setSourceType(Class) - Method in class PamView.SourcePanel
Set the source type for this SourcePanel
setSouthAxis(PamAxis) - Method in class Layout.PamAxisPanel
 
setSouthComponent(JComponent) - Method in class clipgenerator.clipDisplay.ClipDisplayUnit
Add a component to the display unit to be inserted into the South of a BorderLayout
setSouthPanel(Component) - Method in class Layout.PamFramePlots
 
setSpecialDrawing(DataMapDrawing) - Method in class dataMap.OfflineDataMap
 
setSpecies(String) - Method in class clickDetector.ClickTemplate
 
setSpecies(String[]) - Method in class rocca.RoccaSidePanel
Creates a new list of species and sets the counts to 0.
setSpecies(String[]) - Method in class rocca.RoccaSightingDataUnit
Creates a new list of species and sets the counts to 0.
setSpecies(String) - Method in class whistleClassifier.training.TrainingDataSet
 
setSpecies(String) - Method in class whistleClassifier.TrainingDataSet
 
setSpecies(String) - Method in class whistleClassifier.WhistleClassificationDataUnit
 
setSpeciesClassCount(int[]) - Method in class rocca.RoccaSidePanel
Sets all the species counts.
setSpeciesClassCount(int[]) - Method in class rocca.RoccaSightingDataUnit
Sets all the species counts.
setSpeciesCode(LookupList, String) - Method in class difar.DifarDataUnit
Called in viewer when data are read back from binary store to sort out the species luukup item.
setSpeciesDefaults(String) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
setSpeciesDiscard(int, Boolean) - Method in class clickDetector.ClickClassifiers.basic.BasicIdentifierPanel
 
setSpeciesDiscard(int, Boolean) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierPanel
 
setSpeciesDiscard(int, Boolean) - Method in class clickDetector.ClickClassifiers.UserTypesPanel
 
setSpeciesEnable(int, Boolean) - Method in class clickDetector.ClickClassifiers.basic.BasicIdentifierPanel
 
setSpeciesEnable(int, Boolean) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierPanel
 
setSpeciesEnable(int, Boolean) - Method in class clickDetector.ClickClassifiers.UserTypesPanel
 
setSpeciesIndex(int) - Method in class listening.ThingHeard
 
setSpeciesItem(SpeciesItem) - Method in class listening.ThingHeard
 
setSpeciesList(LookupList) - Method in class difar.DifarParameters
 
setSpeciesList(String[]) - Method in class whistleClassifier.FragmentClassifierParams
 
setSpeciesParams(ArrayList<DifarParameters.SpeciesParams>) - Method in class difar.DifarParameters
 
setSpeciesProbabilities(double[]) - Method in class whistleClassifier.WhistleClassificationDataUnit
 
setSpeciesWeighting(int, double) - Method in class clickDetector.alarm.ClickAlarmParameters
 
setSpecNoiseSettings(SpectrogramNoiseSettings) - Method in class whistlesAndMoans.WhistleToneParameters
 
setSpectrogramParameters(SpectrogramParameters) - Method in class fftManager.newSpectrogram.SpectrogramPlotInfo
 
setSpectrogramParameters(SpectrogramParameters) - Method in class Spectrogram.SpectrogramDisplay
 
setSpectrogramParameters(SpectrogramParameters) - Method in interface Spectrogram.SpectrogramParametersUser
 
setSpectrogramSensor(int) - Method in class difar.DifarDataUnit
Choice of data for spectrogram displays.
setSpectrogramX(double) - Method in class PamGraph3D.spectrogram3D.Surface3D
 
setSpectrogramY(double) - Method in class PamGraph3D.spectrogram3D.Surface3D
 
setSpectrum(ArrayList<Double>) - Method in class clickDetector.ClickTemplate
 
setSpectrum(double[]) - Method in class clickDetector.ClickTemplate
 
setSpectrumLog(ArrayList<Double>) - Method in class clickDetector.ClickTemplate
 
setSpectrumLog(double[]) - Method in class clickDetector.ClickTemplate
 
setSpectrumStd(ArrayList<Double>) - Method in class clickDetector.ClickTemplate
 
setSpectrumStd(double[]) - Method in class clickDetector.ClickTemplate
 
setSpectrumStdLog(ArrayList<Double>) - Method in class clickDetector.ClickTemplate
 
setSpectrumStdLog(double[]) - Method in class clickDetector.ClickTemplate
 
setSpeed(double) - Method in class GPS.GpsData
 
setSpeed(double) - Method in class videoRangePanel.importTideData.TideDataUnit
 
setSpeedOfSound(double) - Method in class Array.PamArray
 
setSpeedOfSound(double) - Method in class Localiser.timeDelayLocalisers.Hyperbolic
 
setSpeedOfSoundError(double) - Method in class Array.PamArray
 
setSpinnerValue(double) - Method in class pamScrollSystem.RangeSpinner
 
setSpl(short) - Method in class cpod.CPODClick
 
setSpList(String) - Method in class rocca.RoccaLoggingDataUnit
 
setSqlLogging(SQLLogging) - Method in class offlineProcessing.DataCopyTask
 
setSqlType(int) - Method in class generalDatabase.PamTableItem
 
setStage1Link(int) - Method in class rocca.RoccaParameters
 
setStartAndEnd(long, long) - Method in class Acquisition.rona.RonaFlacProcessor
 
setStartAngle(double) - Method in class angleVetoes.AngleVeto
 
setStarted(boolean) - Method in class networkTransfer.emulator.NetworkEmulator
 
setStartLatitude(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setStartLatLong(GpsData) - Method in class targetMotionModule.TargetMotionResult
Set the location on the track line of the first detection used in this target motion loclaisation.
setStartLocation(int) - Method in class PamView.hidingpanel.HidingDialogPanel
 
setStartLongitude(PamTableItem) - Method in class targetMotionModule.TargetMotionTableInformation
 
setStartOfWhistle(long, double) - Method in class rocca.RoccaSidePanel
 
setStartPoint(double[]) - Method in class targetMotionModule.algorithms.Simplex2D
Set the start point for the simplex.
setStartSample(long) - Method in class PamDetection.AcousticDataUnit
 
setStartTime(long) - Method in class dataMap.OfflineDataMapPoint
 
setStartTime(double) - Method in class rocca.RoccaContourDataBlock
 
setStartupErrors(boolean) - Static method in class PamUtils.Splash
 
setState(TargetConfiguration.State) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the state of the configuration.
setState(int) - Method in class Logging.LogToFlatFile
 
setStaticData(AISStaticData) - Method in class AIS.AISDataUnit
 
setStaticLocaliserSQLLogging(StaticLocaliserSQLLogging) - Method in class staticLocaliser.StaticLocaliserControl
 
setStaticPosition(Streamer, GpsData) - Method in class Array.streamerOrigin.StaticOriginSettings
Set the main position and orientation of a static hydrophone cluster.
setStaticTDManager(TDManager) - Method in class staticLocaliser.StaticLocaliserControl
Set the time delay manager for the static localiser.
setStatisticTypes(int) - Method in class noiseMonitor.NoiseDataBlock
 
setStatsRun(boolean) - Method in class rocca.RoccaContourDataBlock
 
setStatsWindowPos(int) - Method in class pamMaths.HistogramDisplay
 
setStatus(String, String) - Method in class Acquisition.DaqStatusDataUnit
 
setStatus(int) - Method in class binaryFileStorage.BinaryMapMakeProgress
 
setStatus(double, boolean, boolean) - Method in interface difar.DemuxObserver
 
setStatus(String) - Method in class listening.ListeningEffortData
 
setStatus(int) - Method in class Localiser.bearingLocaliser.GroupDetection
 
setStatus(int) - Method in interface offlineProcessing.TaskMonitor
Set the task status.
setStatus(boolean) - Method in class smlGainControl.SMLGainSidePanel
 
setStatus(int) - Method in interface soundPlayback.PlaybackProgressMonitor
Notify playback status.
setStatus(ClassifierTrainingProgress) - Method in class whistleClassifier.training.BatchTrainingDialog
Gets status information back from the boostrap monitor in the main training dialog.
setStatus(ClassifierTrainingProgress) - Method in class whistleClassifier.training.BatchTrainingWorker
this should get status messages back from the main bootstrap dialog.
setStatus(ClassifierTrainingProgress) - Method in class whistleClassifier.training.ClassifierTrainingDialog
 
setStatus(ClassifierTrainingProgress) - Method in interface whistleClassifier.training.TrainingObserver
 
setStatus(int) - Method in class whistleDetector.EventDataUnit
 
setStatusBarLevel(double) - Method in class Acquisition.AcquisitionControl
Sets a level meter on the status bar
setStatusData(SMLStatusData) - Method in class smlPingerControl.data.SMLStatusDataUnit
 
setStdConfusion(Matrix) - Method in class whistleClassifier.FragmentClassifierParams
 
setStep(int) - Method in class rocca.RoccaContourDataUnit
 
setStepSizeMillis(int) - Method in class pamScrollSystem.AbstractPamScroller
 
setStopBits(int) - Method in class portcomms.SerialPortParameters
 
setStopBits(int) - Method in class serialComms.SerialPortPanel
 
setStorageOptions(String, boolean, boolean) - Method in class PamController.StorageParameters
 
setStorageSource(String) - Method in class whistleClassifier.training.TrainingDataSet
 
setStorageSource(String) - Method in class whistleClassifier.TrainingDataSet
 
setStoreData(boolean) - Method in class binaryFileStorage.BinaryDataSource
Flag to say we want to actually store the data.
setStoredSettings(Serializable) - Method in class clickDetector.tdPlots.ClickPlotInfo
 
setStoredSettings(Serializable) - Method in class dataPlots.data.TDDataInfo
Set settings which have been read back from storage (the psf file).
setStoredSettings(Serializable) - Method in class decimus.summarystring.plots.DstrPlotInfo
 
setStoredSettings(Serializable) - Method in class fftManager.newSpectrogram.SpectrogramPlotInfo
 
setStoreLocation(String) - Method in class binaryFileStorage.BinaryStoreSettings
 
setStreamerData(Streamer) - Method in class Array.StreamerDataUnit
 
setStreamerName(String) - Method in class Array.Streamer
 
setStreamerPath(ArrayList<ArrayList<GpsData>>) - Method in class targetMotionModule.TMManager
 
setStreamName(String) - Method in class binaryFileStorage.BinaryHeader
 
setStreamName(String) - Method in class binaryFileStorage.BinaryMapMakeProgress
 
setStreamStatus(int) - Method in class Acquisition.DaqSystem
 
setStreamStatus(int) - Method in class Acquisition.FileInputSystem
 
setString(String) - Method in class annotation.string.StringAnnotation
 
setStringData(String) - Method in class PamUtils.Ascii6Bit
 
setSubArrayType(int) - Method in class PamDetection.AbstractLocalisation
Set the type of array (or sub array) used for this particular localisation This may not be the entire array if detection was only on some channels.
setSubFolderButtonName(String) - Method in class PamUtils.SelectFolder
Set the name for the "Include Sub folders" checkbox
setSubFolderButtonToolTip(String) - Method in class PamUtils.SelectFolder
Set the name for the "Include Sub folders" checkbox
setSummaryLists() - Method in class offlineProcessing.OfflineTaskGroup
Setup summary lists of required and affected datablocks based on which tasks are actually going to run .
setSummaryString(String) - Method in class decimus.summarystring.DStrDataUnit
 
setSurfaceData(double[][]) - Method in class difar.DifarDataUnit
 
setSurfaceSummary(double[]) - Method in class difar.DifarDataUnit
 
setSuspectEventTimes(boolean) - Method in class clickDetector.offlineFuncs.OfflineEventDataUnit
 
setSweep(int) - Method in class rocca.RoccaContourDataUnit
 
setSymbol(PamSymbol) - Method in class listening.SpeciesItem
 
setSymbol(int) - Method in class PamView.PamSymbol
 
setSymbol() - Method in class PamView.PamSymbolSelector
 
setSymbol(PamSymbol) - Method in class PamView.PamSymbolViewer
 
setSymbolChooser(TDSymbolChooser) - Method in class dataPlots.data.StandardBearingInfo
 
setSymbolChooser(TDSymbolChooser) - Method in class dataPlots.data.StandardDataInfo
 
setSymbolSize(double) - Method in class loc3d_Thode.TowedArray3DOverlayGraphics
 
setSymbolType(String) - Method in class generalDatabase.lookupTables.LookupItem
 
setSynchMode(int, int) - Method in class hfDaqCard.SmruDaqJNI
Set a board synch mode.
setSynchObject(Object) - Method in class PamguardMVC.ChannelIterator
 
setSystemTime(long) - Static method in class PamUtils.SystemTiming
 
setSystemTime(Calendar) - Static method in class PamUtils.SystemTiming
 
setTabBackground(Color) - Method in class PamView.hidingpanel.TabbedHidingPane
 
setTabHighlight(Color) - Method in class PamView.hidingpanel.TabbedHidingPane
 
setTableData(PamDataUnit) - Method in class Acquisition.AcquisitionLogging
 
setTableData(PamDataUnit) - Method in class AIS.AISLogger
 
setTableData(PamDataUnit) - Method in class alarm.AlarmLogging
 
setTableData(PamDataUnit) - Method in class angleMeasurement.AngleLogging
 
setTableData(PamDataUnit) - Method in class Array.HydrophoneSQLLogging
 
setTableData(PamDataUnit) - Method in class Array.StreamerLogging
 
setTableData(PamDataUnit) - Method in class ArrayAccelerometer.ArrayAccelLogging
 
setTableData(PamDataUnit) - Method in class beakedWhaleProtocol.BeakedExperimentLogging
 
setTableData(PamDataUnit) - Method in class beakedWhaleProtocol.BeakedLogging
 
setTableData(PamDataUnit) - Method in class beakedWhaleProtocol.ShoreStationLogging
 
setTableData(PamDataUnit) - Method in class clickDetector.ClickLogger
 
setTableData(PamDataUnit) - Method in class clickDetector.ClickTrainLogger
 
setTableData(PamDataUnit) - Method in class clickDetector.offlineFuncs.OfflineClickLogging
 
setTableData(PamDataUnit) - Method in class clickDetector.offlineFuncs.OfflineEventLogging
 
setTableData(PamDataUnit) - Method in class clickDetector.offlineFuncs.rcImport.ClickImportLogging
 
setTableData(PamDataUnit) - Method in class dbht.DbHtLogging
 
setTableData(PamDataUnit) - Method in class dbht.offline.OfflineDbHtLogging
 
setTableData(PamDataUnit) - Method in class decimus.summarystring.DStrLogging
 
setTableData(PamDataUnit) - Method in class depthReadout.DepthSQLLogging
 
setTableData(PamDataUnit) - Method in class difar.DifarSqlLogging
 
setTableData(PamDataUnit) - Method in class difar.trackedGroups.TrackedGroupSqlLogging
 
setTableData(PamDataUnit) - Method in class generalDatabase.LogModules
 
setTableData(PamDataUnit) - Method in class generalDatabase.LogSettings
 
setTableData(PamDataUnit) - Method in class generalDatabase.PamDetectionLogging
 
setTableData(PamDataUnit) - Method in class generalDatabase.SQLLogging
Callback function when new data are created that allows the user to set the data for each column.
setTableData(PamDataUnit) - Method in class GPS.GpsLogger
 
setTableData(PamDataUnit) - Method in class IMU.IMULogging
 
setTableData(PamDataUnit) - Method in class IshmaelDetector.IshLogger
 
setTableData(PamDataUnit) - Method in class likelihoodDetectionModule.thresholdDetector.DetectorSQLLogging
 
setTableData(PamDataUnit) - Method in class listening.ListeningEffortLogging
 
setTableData(PamDataUnit) - Method in class listening.ThingHeardLogging
 
setTableData(PamDataUnit) - Method in class loc3d_Thode.TowedArray3DSQLLogging
 
setTableData(PamDataUnit) - Method in class loggerForms.FormsLogging
 
setTableData(PamDataUnit) - Method in class Map.MapCommentSQLLogging
 
setTableData(PamDataUnit) - Method in class networkTransfer.receive.BuoyStatusLogging
 
setTableData(PamDataUnit) - Method in class networkTransfer.receive.NetGPSLogging
 
setTableData(PamDataUnit) - Method in class noiseMonitor.NoiseLogging
 
setTableData(PamDataUnit) - Method in class noiseOneBand.offline.OfflineOneBandLogging
 
setTableData(PamDataUnit) - Method in class noiseOneBand.OneBandLogging
 
setTableData(PamDataUnit) - Method in class PamDetection.AcousticSQLLogging
 
setTableData(PamDataUnit) - Method in class RightWhaleEdgeDetector.RWESQLLogging
 
setTableData(PamDataUnit) - Method in class rocca.RoccaDetectionLogger
Load up the class fields with the data to save
setTableData(PamDataUnit) - Method in class rocca.RoccaStatsLogger
Load up the class fields with the data to save
setTableData(PamDataUnit) - Method in class seismicVeto.VetoLogging
 
setTableData(PamDataUnit) - Method in class serialPortLogger.SerialDatabasseLoggging
 
setTableData(PamDataUnit) - Method in class simulatedAcquisition.SimSoundsLogging
 
setTableData(PamDataUnit) - Method in class smlPingerControl.data.SMLPingerLogging
 
setTableData(PamDataUnit) - Method in class SoundRecorder.RecorderLogger
 
setTableData(PamDataUnit) - Method in class staticLocaliser.StaticLocaliserSQLLogging
 
setTableData(PamDataUnit) - Method in class targetMotionModule.TargetMotionSQLLogging
 
setTableData(PamDataUnit) - Method in class UserInput.UserInputLogger
 
setTableData(PamDataUnit) - Method in class videoRangePanel.VRSQLLogging
 
setTableData(PamDataUnit) - Method in class whistleClassifier.WhistleClassifierLogging
 
setTableData(PamDataUnit) - Method in class whistleDetector.WhistleEventLogger
 
setTableData(PamDataUnit) - Method in class whistleDetector.WhistleLogger
 
setTableData(PamDataUnit) - Method in class whistlesAndMoans.WhistleToneLogging
 
setTableData(PamDataUnit) - Method in class WorkshopDemo.WorkshopSQLLogging
 
setTableDefinition(PamTableDefinition) - Method in class generalDatabase.SQLLogging
 
setTableName(String) - Method in class generalDatabase.EmptyTableDefinition
 
setTabName(FormDescription) - Method in class loggerForms.FormsTabPanel
Set the name of a tab using the default name.
setTabName(FormDescription, String) - Method in class loggerForms.FormsTabPanel
Set the name of a tab.
setTabPanel(PamTabPanel) - Method in class PamController.PamControlledUnit
Sets the tab panel for the PamControlledUnit.
setTabTextColour(Color) - Method in class PamView.hidingpanel.TabbedHidingPane
 
setTaregtMotionManager(TMManager) - Method in class targetMotionModule.TargetMotionControl
 
setTargetConfigurations(ArrayList<TargetConfiguration>) - Method in class likelihoodDetectionModule.TreeTableModel
Sets the TargetConfigurations that are being managed by the model.
setTargetMotionDataBlock(TargetMotionDataBlock) - Method in class targetMotionModule.TargetMotionControl
 
setTargetMotionLocaliser(TargetMotionLocaliser) - Method in class targetMotionOld.TargetMotionSQLLogging
 
setTargetMotionSQLLogging(TargetMotionSQLLogging) - Method in class targetMotionModule.TargetMotionControl
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DaqConfig
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxCfgSampClkTimingParams
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxClearTaskParams
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxCreateAIVoltageChanParams
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxCreateTaskParams
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxStartTaskParams
 
setTaskHandle(int) - Method in class nidaqdev.Nidaq.DAQmxStopTaskParams
 
setTaskMonitor(TaskMonitor) - Method in class offlineProcessing.OfflineTaskGroup
 
setTaskSelection(int, boolean) - Method in class offlineProcessing.TaskGroupParams
Set the selection state of a particular task.
setTdd(double, int) - Method in class loc3d_Thode.GroupDetDataUnit
 
setTdd(double[]) - Method in class loc3d_Thode.GroupDetDataUnit
 
setTDSel(Integer) - Method in class staticLocaliser.panels.MapPanel3DSL
 
setTdSel(Integer) - Method in class staticLocaliser.panels.TimePosShape3D
 
settdSel(Integer) - Method in class staticLocaliser.StaticLocalise
Set the current selected time delay but only if the localiser isn't running.
setTempCrossing(DIFARCrossingInfo) - Method in class difar.DifarDataUnit
 
setTempDir(String) - Method in class difar.demux.GreenridgeParams
 
setTempGroup(String) - Method in class difar.DifarDataUnit
 
setTempICI(double) - Method in class clickDetector.ClickDetection
 
setTerminalConfig(int) - Method in class nidaqdev.Nidaq.DAQmxCreateAIVoltageChanParams
 
setTerminalConfig(int) - Method in class nidaqdev.Nidaq
 
setText(String) - Method in class generalDatabase.lookupTables.LookupItem
 
setText(String) - Method in class PamView.DBTextArea
 
setText(String) - Method in class PamView.TextKeyItem
 
setText(String) - Method in interface whistleClassifier.training.ProgressInformation
 
setTextLength(int) - Method in class PamUtils.SelectFolder
 
setTextProgress(int, int, String) - Method in class IMU.IMUImportMananger
 
setTextProgress(int, int, String) - Method in class PamView.importData.ImportDataSystem
Set progress in the load bars' text output.
setTextUpdate(String) - Method in class PamView.ImportLoadBar
 
setTextUpdate(String) - Method in class PamView.PamLoadBar
 
setThreadingJitterMillis(int) - Method in class PamModel.PamModelSettings
 
setThumbSizes(int) - Method in class PamView.sliders.PamRangeSlider
 
setThumbSizes(int, int) - Method in class PamView.sliders.PamSliderUI
Set the sizes of the thumbs
setTickPosition(int) - Method in class Layout.PamAxis
 
setTilt(Double) - Method in class angleMeasurement.AngleDataUnit
 
setTilt(double, int) - Method in class PamDetection.PamLocalisation
Deprecated.
 
setTilt(Double) - Method in class videoRangePanel.vrmethods.ImageAnglePanel
 
setTiltLabel(Double) - Method in class videoRangePanel.vrmethods.ImageAnglePanel
 
setTilts(double[]) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setTilts(double, int) - Method in class loc3d_Thode.TowedArray3DDataUnit
 
setTime(int) - Method in class GPS.GpsData
 
setTime(long) - Method in class rocca.RoccaContourDataUnit
 
setTimeBinScale(int) - Method in class clickDetector.IDI_DisplayParams
Sets the size (along the vertical axis) of the time bins, in milliseconds.
setTimeDelay(int, double) - Method in class clickDetector.ClickLocalisation
Set a time delay.
setTimeDelayErrors(ArrayList<ArrayList<TDArrayList<Double>>>) - Method in class staticLocaliser.TDManager
 
setTimeDelayPos(Integer) - Method in class staticLocaliser.SLResult
 
setTimeDelayPos(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setTimeDelays(double[]) - Method in class clickDetector.ClickLocalisation
Set the time delays
setTimeDelays(ArrayList<ArrayList<Double>>) - Method in class Localiser.timeDelayLocalisers.MCMC
 
setTimeDelays(ArrayList<ArrayList<Double>>) - Method in class Localiser.timeDelayLocalisers.Simplex
 
setTimeDelays(ArrayList<ArrayList<TDArrayList<Double>>>) - Method in class staticLocaliser.TDManager
 
setTimeDelaysErrors(ArrayList<ArrayList<Double>>) - Method in class Localiser.timeDelayLocalisers.MCMC
Note the sample rate must be set before this function.
setTimeDelaysErrors(ArrayList<ArrayList<Double>>) - Method in class Localiser.timeDelayLocalisers.Simplex
 
setTimeDelaysObs(ArrayList<ArrayList<Double>>) - Method in class Localiser.timeDelayLocalisers.Hyperbolic
 
setTimeDelaysSeconds(double[]) - Method in class whistlesAndMoans.ConnectedRegionDataUnit
 
setTimeInMillis(long) - Method in class GPS.GpsData
 
setTimeInMillis(Long) - Method in class loggerForms.LatLongTime
 
setTimeMillis(long) - Method in class Array.Hydrophone
 
setTimeMillis(Long) - Method in class staticLocaliser.SLResult
 
setTimeMilliseconds(long) - Method in class PamguardMVC.PamDataUnit
 
setTimeOfNextSave() - Method in class loggerForms.FormDescription
 
setTimeout(double) - Method in class nidaqdev.Nidaq.DAQmxReadAnalogF64Params
 
setTimer() - Method in class clickDetector.IDI_Display
Creates a new timer and sets the schedule.
setTimeRange(double) - Method in class clickDetector.BTDisplayParameters
 
setTimeRanges(double[]) - Method in class pamScrollSystem.RangeSpinner
 
setTimeResolution(double) - Method in class likelihoodDetectionModule.TargetConfiguration
Sets the time resolution.
setTimes(double[]) - Method in class xBatLogViewer.XBatLogDataUnit
 
setTimeSeconds(double[]) - Method in class whistleClassifier.TrainingContour
 
setTimesInSeconds(double[]) - Method in class whistleClassifier.training.TrainingContour
 
setTimeWindowAddition(double) - Method in class PamDetection.AbstractDetectionMatch
 
settingMenu(Frame) - Method in class difar.DifarControl
 
settings(Frame) - Method in class angleMeasurement.AngleMeasurement
 
settings(Frame) - Method in class angleMeasurement.FluxgateWorldAngles
 
settings - Static variable in class offlineProcessing.OLProcessDialog
 
settings - Static variable in class pamScrollSystem.LoadOptionsDialog
 
settings() - Method in class staticLocaliser.panels.Map
 
settings() - Method in class staticLocaliser.panels.MapPanel3DSL
 
settings - Static variable in class staticLocaliser.panels.StaticLocalisationMainPanel
 
settings() - Method in class targetMotionModule.panels.MapPanel
 
settings() - Method in class targetMotionModule.panels.MapPanel2D
 
settings() - Method in class targetMotionModule.panels.MapPanel3D
 
settings - Variable in class targetMotionModule.panels.TargetMotionMainPanel
 
settings() - Method in class targetMotionOld.dialog.DialogMap
 
settings() - Method in class targetMotionOld.dialog.DialogMap2D
 
settings() - Method in class targetMotionOld.dialog.DialogMap3D
 
settings - Static variable in class videoRangePanel.panels.VRSidePanel
 
SETTINGS_CHANGE - Static variable in class staticLocaliser.StaticLocaliserControl
 
SETTINGS_CHANGE - Static variable in class videoRangePanel.VRControl
Some settings in the vrparams may have changed
settingsButton(JFrame, int) - Method in class videoRangePanel.VRControl
Opens the settings dialog and updates the module if new settings are saved.
settingsButtonSize - Static variable in class videoRangePanel.panels.VRPanel
 
settingsDialog(Frame) - Method in class ArrayAccelerometer.ArrayAccelControl
 
settingsDialog(Frame) - Method in class RightWhaleEdgeDetector.RWEControl
 
settingsDialog(Frame) - Method in class whistleClassifier.WhistleClassifierControl
 
SettingsFileData - Class in PamController
 
SettingsFileData() - Constructor for class PamController.SettingsFileData
 
SettingsFileDialog - Class in PamController
 
settingsFileType - Static variable in class binaryFileStorage.BinaryStore
 
settingsImage - Static variable in class dataPlots.layout.CompoundHidingTabPane
 
settingsMenu(Frame) - Method in class noiseBandMonitor.NoiseBandControl
 
settingsMenu(Frame) - Method in class smlGainControl.SMLGainControl
 
settingsMenuAction(Frame) - Method in class dbht.DbHtControl
 
settingsMenuAction(Frame) - Method in class levelMeter.LevelMeterControl
 
settingsMenuAction(Frame) - Method in class noiseOneBand.OneBandControl
 
SettingsObject - Interface in PamController
All settings objects must implements both Cloneable and Serializable to make an interface that has both and use for settings (a bit after the horse has bolted this, but may be able to apply retrospectively).
SettingsStrip - Class in dataMap
Display a simple strip along the top of the Scrolling data panel which shows a little arrow or something for each set of PAMGAURD settings
SettingsStrip(ScrollingDataPanel) - Constructor for class dataMap.SettingsStrip
 
setTip(String) - Method in class tipOfTheDay.PamTip
 
setTitle(String) - Method in class loggerForms.formdesign.ControlTitle
 
setTitle(String) - Method in class PamView.hidingpanel.HidingPanel
 
setTitle(String) - Method in class PamView.PamGui
 
setTitle(String) - Method in class PamView.PamObjectViewer
 
setTitle(String) - Method in interface PamView.PamViewInterface
 
setTitle(String) - Method in class performanceTests.PerformanceWindow
 
setTMProgress(double) - Method in class targetMotionModule.TMManager.TMInfoWorker
 
setToolBar(PamToolBar) - Method in class clickDetector.offlineFuncs.OfflineToolbar
 
setToolTipText(String) - Method in class generalDatabase.lookupTables.LookupComponent
 
setToolTipText(String, String) - Method in class generalDatabase.lookupTables.LookupComponent
 
setToolTipText(String) - Method in class PamModel.PamModuleInfo
 
setToolTipToAllSubJComponants(Component) - Method in class loggerForms.controls.LoggerControl
 
setTopic(String) - Method in class generalDatabase.lookupTables.LookupComponent
 
setTopic(String) - Method in class generalDatabase.lookupTables.LookupItem
 
setTopic(String) - Method in class tipOfTheDay.PamTip
 
setTopPanel(PamPanel) - Method in class dataPlots.layout.TDGraph
Set a panel at the top of the graph;
setTotalStreams(int) - Method in class binaryFileStorage.BinaryMapMakeProgress
 
setTrackDragging(boolean) - Method in class PamView.sliders.PamRangeSlider
Allow the track between thumbs to be dragged.
setTrackDragging(boolean) - Method in class PamView.sliders.PamRangeSliderUI
 
setTracked(boolean) - Method in class clickDetector.ClickDetection
 
setTracked(boolean) - Method in class clickDetector.OldClickClass
 
setTrackedGroup(String) - Method in class difar.DifarDataUnit
 
setTrackedGroupProcess(TrackedGroupProcess) - Method in class difar.DifarControl
 
setTrainedDataset(Instances) - Method in class rocca.RoccaRFModel
 
setTrainId(int) - Method in class clickDetector.ClickTrainDetection
 
setTrainingDataCollection(TrainingDataCollection) - Method in class whistleClassifier.training.TrainingSelector
Sets the training data collection
setTrainStatus(int) - Method in class clickDetector.ClickTrainDetection
 
setTransform(Transform3D) - Method in class PamGraph3D.AxisVisualisation
Takes a 3D, takes only the rotational component and transforms the axis by thta rotation
setTransmissionGains(double[][]) - Method in class simulatedAcquisition.sounds.SimSound
 
setTreeVotes(double[]) - Method in class rocca.RoccaContourDataBlock
 
setTriggerCount(int, double) - Method in class alarm.AlarmParameters
 
setTriggerHistogram(TriggerHistogram[]) - Method in class clickDetector.TriggerLevelDataUnit
 
setTriggerMessage(String) - Method in class SoundRecorder.RecorderTabPanel
 
setTrueHeading(Double) - Method in class angleMeasurement.AngleDataUnit
 
setTrueHeading(Double) - Method in class GPS.GpsData
 
setTrueValues(double[]) - Method in class angleMeasurement.AngleCalibration
 
setType(int) - Method in class noiseMonitor.NoiseMeasurementBand
 
setType(String) - Method in class PamguardMVC.ProcessAnnotation
 
setUI(HelpContentViewerUI) - Method in class PamView.PamHelpContentViewer
 
setUniqueSuperDetection(U) - Method in class PamDetection.PamDetection
Sets a unique super detection.
setUnitIncrement(long) - Method in class pamScrollSystem.AbstractPamScroller
 
setUnitIncrement(long) - Method in class pamScrollSystem.PamScroller
 
setUnits(String) - Method in class dataGram.DatagramScaleInformation
 
setUnits(int) - Method in class nidaqdev.Nidaq.DAQmxCreateAIVoltageChanParams
 
setUnitType(String) - Method in class PamController.UsedModuleInfo
 
setup() - Method in class levelMeter.LevelMeterSidePanel
 
setupAlarm() - Method in class alarm.AlarmProcess
 
setupCalibration() - Method in class angleMeasurement.AngleMeasurement
Sets up the angle calibration.
setUpClassifier() - Method in class rocca.RoccaClassifier
Loads the Classifier model from the file specified in RoccaParameters
setupConnections() - Method in class IshmaelDetector.IshDetFnProcess
 
setupConnections() - Method in class IshmaelDetector.IshPeakProcess
 
setupConnections() - Method in class IshmaelLocator.IshLocProcess
 
setupControlledUnit() - Method in class Acquisition.AcquisitionControl
 
setupControlledUnit() - Method in class clickDetector.ClickControl
 
setupControlledUnit() - Method in class decimator.DecimatorControl
 
setupControlledUnit() - Method in class fftManager.PamFFTControl
 
setupControlledUnit() - Method in class IshmaelLocator.IshLocControl
 
setupControlledUnit() - Method in class KernelSmoothing.KernelSmoothingControl
 
setupControlledUnit() - Method in class NMEA.NMEAControl
 
setupControlledUnit() - Method in class PamController.PamControlledUnit
called for all PamControlledUnits after all units have been created.
setupDataBlock() - Method in class Acquisition.AcquisitionProcess
called when acquisition parameters change.
setUpdatePolicy(int) - Method in class generalDatabase.SQLLogging
 
setUpdateReference(PamTableItem) - Method in class generalDatabase.PamTableDefinition
 
setupFFT() - Method in class fftManager.PamFFTProcess
 
setupFFT() - Method in class likelihoodDetectionModule.LikelihoodFFTProcess
 
setupGroups(GroupedSourceParameters) - Method in class Localiser.bearingLocaliser.DetectionGrouper
 
setupLocator(PamArray) - Method in class Array.Streamer
Set up the hydrophone locator.
setupLogging() - Method in class whistleClassifier.WhistleClassifierProcess
Called after settings read in so that correct table can be created.
setUpperDragging(boolean) - Method in class PamView.sliders.PamRangeSliderUI
 
setUpperThumbFill(Color) - Method in class PamView.sliders.PamRangeSliderUI
 
setUpperThumbOutline(Color) - Method in class PamView.sliders.PamRangeSliderUI
 
setUpperThumbRect(Rectangle) - Method in class PamView.sliders.PamRangeSliderUI
 
setUpperThumbSelected(boolean) - Method in class PamView.sliders.PamRangeSliderUI
 
setUpperValue(int) - Method in class PamView.sliders.PamRangeSlider
Sets the upper value in the range.
setupPinger() - Method in class smlPingerControl.SMLPingerProcess
setup and start the pinger.
setupPort() - Method in class serialPortLogger.SerialDataProcess
 
setupProcess() - Method in class clickDetector.BinaryClickProcess
 
setupProcess() - Method in class clickDetector.ClickAlarmManager
 
setupProcess() - Method in class clickDetector.ClickDetector
 
setupProcess() - Method in class dbht.DbHtProcess
 
setupProcess() - Method in class decimator.DecimatorProcess
 
setupProcess() - Method in class difar.DifarProcess
 
setupProcess() - Method in class Filters.FilterProcess
 
setupProcess() - Method in class KernelSmoothing.KernelSmoothingProcess
 
setupProcess() - Method in class ltsa.LtsaProcess
 
setupProcess() - Method in class noiseBandMonitor.NoiseBandProcess
 
setupProcess() - Method in class noiseOneBand.OneBandProcess
 
setupProcess() - Method in class PamguardMVC.PamProcess
called for every process once the systemmodel has been created.
setupProcess() - Method in class rocca.RoccaProcess
Method run on startup
setupProcess() - Method in class spectrogramNoiseReduction.SpectrogramNoiseProcess
 
setupProcess() - Method in class whistlesAndMoans.WhistleToneConnectProcess
 
setupProcess() - Method in class xBatLogViewer.XBatLogProcess
 
setupProcesses() - Method in class RightWhaleEdgeDetector.RWEProcess
 
setupScrollBar() - Method in class dataMap.ScrollingDataPanel
 
setUpSerialCom() - Method in class WILDInterface.WILDSidePanel
 
setupTimer() - Method in class ArrayAccelerometer.ArrayAccelProcess
 
setupToolBar() - Method in class clickDetector.offlineFuncs.OfflineToolbar
 
setUseAnalysisTime(boolean) - Method in class PamController.PamViewParameters
 
setUseCheatIndexing(boolean) - Method in class generalDatabase.EmptyTableDefinition
Cheat at database indexing.
setUseClick(boolean) - Method in class rocca.RoccaParameters
 
setUseFFT(boolean) - Method in class rocca.RoccaParameters
 
setUseMax(boolean) - Method in class generalDatabase.dataExport.ValueFilterParams
 
setUseMin(boolean) - Method in class generalDatabase.dataExport.ValueFilterParams
 
setUserAlarmFile(String) - Method in class clickDetector.ClickAlarm
 
setUserChanged(boolean) - Method in class rocca.RoccaContourDataUnit
 
setUserFrameParameters(UserFrameParameters) - Method in class userDisplay.UserFramePlots
 
setUserString(String) - Method in class UserInput.UserInputDataUnit
 
setUseSpecies(int, boolean) - Method in class clickDetector.alarm.ClickAlarmParameters
 
setUseWMD(boolean) - Method in class rocca.RoccaParameters
 
setValue(Object) - Method in class clickDetector.ClickClassifiers.basicSweep.CodeSpinnerModel
 
setValue(Object) - Method in class fftManager.FFTLengthModel
 
setValue(Object) - Method in class generalDatabase.PamTableItem
Sets the value of data to be written to the database column.
setValue(int) - Method in class PamView.sliders.PamRangeSlider
Sets the lower value in the range.
setValueAt(Object, int, int) - Method in class likelihoodDetectionModule.TreeTable
 
setValueAt(Object, Object, int) - Method in class likelihoodDetectionModule.TreeTableModel
Implementation of TreeModel.setValueAt().
setValueAt(Object, int, int) - Method in class likelihoodDetectionModule.TreeTableModelAdapter
 
setValueMillis(long) - Method in class pamScrollSystem.AbstractPamScroller
 
setValues() - Method in class loggerForms.formdesign.ControlTitle
 
setVector(double[]) - Method in class pamMaths.PamVector
 
setVersionNumber(int) - Method in class binaryFileStorage.BinaryObjectData
 
setVessel(boolean) - Method in class difar.DifarDataUnit
 
setVesselDimension(double, double, double, double) - Method in class Map.Vessel
 
setVetoOn(boolean) - Method in class seismicVeto.VetoBackgroundDataUnit
 
setViewEndTime(long) - Method in class PamController.PamViewParameters
 
setViewPosition(long) - Static method in class PamUtils.PamCalendar
 
setViewStartTime(long) - Method in class PamController.PamViewParameters
 
setViewTimes(long, long) - Static method in class PamUtils.PamCalendar
 
setVisible(boolean) - Method in class angleVetoes.AngleVetoDisplay
 
setVisible(boolean) - Method in class beakedWhaleProtocol.BeakedLocationDialog
 
setVisible(boolean) - Method in class binaryFileStorage.BinaryMapMakingDialog
 
setVisible(boolean) - Method in class difar.calibration.CalibrationDialog
 
setVisible(boolean) - Method in class generalDatabase.DBMapMakingDialog
 
setVisible(boolean) - Method in class GPS.UpdateClockDialog
 
setVisible(boolean) - Method in class Map.MapCommentDialog
 
setVisible(boolean) - Method in class offlineProcessing.OLProcessDialog
 
setVisible(boolean) - Method in class pamScrollSystem.AbstractPamScrollerAWT
Set the visibility of the scroll bar component.
setVisible(boolean) - Method in class pamScrollSystem.LoadingDataDialog
 
setVisible(boolean) - Method in class PamView.hidingpanel.HidingDialog
 
setVisible(boolean) - Method in class PamView.ImportLoadBar
 
setVisible(boolean) - Method in class PamView.ObserverListPopup
 
setVisible(boolean) - Method in class PamView.PamDialog
 
setVisible(boolean) - Method in class performanceTests.PerformanceWindow
 
setVisible(boolean) - Method in class targetMotionOld.dialog.TargetMotionDialog
 
setVisibleAmount(long) - Method in class pamScrollSystem.AbstractPamScroller
 
setVisibleAmount(long) - Method in class pamScrollSystem.PamScroller
 
setVoltageChannel(int, int, double[], double) - Method in class nidaqdev.Nidaq
Set a single voltage channel to a fixed value.
setVoltageChannel(int, int, double) - Method in class nidaqdev.Nidaq
 
setVoltsPeak2Peak(double) - Method in class Acquisition.AcquisitionParameters
 
setVolume(int) - Method in class listening.ThingHeard
 
setVoteList(String) - Method in class rocca.RoccaLoggingDataUnit
 
setVPeak2Peak(double) - Method in class Acquisition.AcquisitionDialog
Called by the specific DaqSystem to set the peak to peak voltage range.
setVrMeasurement(VRMeasurement) - Method in class videoRangePanel.VRDataUnit
 
setVRMethod(int) - Method in class videoRangePanel.VRControl
Set the current method.
setWantedString() - Method in class GPS.ProcessNmeaData
 
setWarnDefaultSetting(boolean) - Method in class PamView.PamDialog
 
setWarningTitle(String) - Method in class PamView.PamDialog
 
setWaveData(double[][]) - Method in class clickDetector.ClickDetection
 
setWaveData(double[][]) - Method in class clickDetector.OldClickClass
 
setWekaClassifier(AbstractClassifier) - Method in class classifier.AbstractWekaClassifier
 
setWestAxis(PamAxis) - Method in class Layout.PamAxisPanel
 
setWestComponent(JComponent) - Method in class clipgenerator.clipDisplay.ClipDisplayUnit
Add a component to the display unit to be inserted into the West of a BorderLayout
setWestPanel(Component) - Method in class Layout.PamFramePlots
 
setWestTitle(String) - Method in class generalDatabase.lookupTables.LookupComponent
 
setWhistleClassificationParameters(WhistleClassificationParameters) - Method in class whistleClassifier.WhistleClassifierControl
 
setWhistleFragmenter(WhistleFragmenter) - Method in class whistleClassifier.training.TrainingSelector
Set the whistle fragmenter to use.
setWhistleFragmenter(WhistleFragmenter) - Method in class whistleClassifier.WhistleClassifierControl
 
setWhistlePeaks(ArrayList<WhistlePeak>) - Method in class whistleDetector.PeakDataUnit
 
setWhistleShape(WhistleShape) - Method in class whistleDetector.ShapeDataUnit
 
setWhistleSourceData(AbstractWhistleDataBlock) - Method in class rocca.RoccaProcess
 
setWidth(int) - Method in class PamView.PamSymbol
 
setWindowGain(double) - Method in class fftManager.FFTDataBlock
 
setWindowRMS(double) - Method in class rocca.RoccaContourDataUnit
 
setWmAlarmParameters(WMAlarmParameters) - Method in class whistlesAndMoans.dataSelector.WMDDataSelector
 
setWmDataSource(String) - Method in class rocca.RoccaParameters
 
setWriteToFile(PrintWriter) - Method in class Logging.LogToFlatFile
 
setX(double) - Method in class Array.Streamer
 
setX(double) - Method in class PamUtils.Point3d
 
setX(double) - Method in class staticLocaliser.SLResult
 
setX1(int) - Method in class Layout.PamAxis
 
setX2(int) - Method in class Layout.PamAxis
 
setXAxisNumberFormat(String) - Method in class pamMaths.HistogramDisplay
 
setxErr(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setXError(double) - Method in class staticLocaliser.SLResult
 
setXLabel(String) - Method in class pamMaths.HistogramDisplay
 
setXTE(double) - Method in class beakedWhaleProtocol.BeakedControl
 
setY(double) - Method in class Array.Streamer
 
setY(double) - Method in class PamUtils.Point3d
 
setY(double) - Method in class staticLocaliser.SLResult
 
setY1(int) - Method in class Layout.PamAxis
 
setY2(int) - Method in class Layout.PamAxis
 
setyErr(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setYError(double) - Method in class staticLocaliser.SLResult
 
setYLabel(String) - Method in class pamMaths.HistogramDisplay
 
setZ(double) - Method in class Array.Streamer
 
setZ(double) - Method in class PamUtils.Point3d
 
setZ(double) - Method in class staticLocaliser.SLResult
 
setZero() - Method in class angleMeasurement.AngleMeasurement
 
setZero() - Method in class angleMeasurement.FluxgateWorldAngles
 
setZeroCrossingStats(ZeroCrossingStats[]) - Method in class clickDetector.ClickDetection
 
setZeroPeak(double) - Method in class dbht.DbHtDataUnit
 
setZeroPeak(double) - Method in class noiseOneBand.OneBandDataUnit
 
setzErr(PamTableItem) - Method in class staticLocaliser.SLTableDefinition
 
setZError(double) - Method in class staticLocaliser.SLResult
 
setZoomFactor() - Method in class PamGraph3D.MouseProportionalZoom
Finds how far the graph is zoomed out and proportionally adjusts the zoom and if present, the translation factor.
setZoomShapeFill(Color) - Method in class PamView.zoomer.ZoomShape
 
setZoomShapeOutline(Color) - Method in class PamView.zoomer.ZoomShape
 
SgramCorrControl - Class in IshmaelDetector
 
SgramCorrControl(String) - Constructor for class IshmaelDetector.SgramCorrControl
 
SgramCorrParams - Class in IshmaelDetector
 
SgramCorrParams() - Constructor for class IshmaelDetector.SgramCorrParams
 
SgramCorrParamsDialog - Class in IshmaelDetector
 
SgramCorrProcess - Class in IshmaelDetector
This implements the spectrogram correlation detector.
SgramCorrProcess(SgramCorrControl, PamDataBlock) - Constructor for class IshmaelDetector.SgramCorrProcess
 
SgramCorrProcess.PerChannelInfo - Class in IshmaelDetector
Information specific to each channel.
SgramCorrProcess.PerChannelInfo() - Constructor for class IshmaelDetector.SgramCorrProcess.PerChannelInfo
 
ShapeDataUnit - Class in whistleDetector
Example class to go with WslPeak to show how WslPeaks, WslShapes and WslEvents all go together.
ShapeDataUnit(long, int, long, int, WhistleShape) - Constructor for class whistleDetector.ShapeDataUnit
 
ship - Variable in class Map.MapPanel
 
ShipDimensionsDrawing - Class in GPS
Class to draw a simple ship, to show the layout of the standard AIS dimensions.
ShipDimensionsDrawing() - Constructor for class GPS.ShipDimensionsDrawing
 
ShipDimensionsFields - Class in GPS
 
ShipDimensionsFields(String) - Constructor for class GPS.ShipDimensionsFields
 
ShipDimensionsPanel - Class in GPS
 
ShipDimensionsPanel(Component, Component) - Constructor for class GPS.ShipDimensionsPanel
 
shipName - Variable in class AIS.AISStaticData
 
shipOutline - Variable in class Map.Vessel
 
shipPolygon - Variable in class Map.Vessel
 
shipPolygonLatLog - Variable in class Map.Vessel
 
shipType - Variable in class AIS.AISStaticData
 
shipTypeAndCargo() - Method in class AIS.AISStaticData
 
SHORE_TAB - Static variable in class videoRangePanel.panels.VRParametersDialog
 
shoreFile - Variable in class videoRangePanel.VRParameters
file name for shore data (Gebco format)
ShoreManager - Class in videoRangePanel
Separate class to manage shore functions for the video range, all this could go in the controller, but might as well keep it separate.
ShoreManager() - Constructor for class videoRangePanel.ShoreManager
 
ShoreManager(MapFileManager) - Constructor for class videoRangePanel.ShoreManager
 
ShoreStationDataBlock - Class in beakedWhaleProtocol
 
ShoreStationDataBlock(String, PamProcess) - Constructor for class beakedWhaleProtocol.ShoreStationDataBlock
 
ShoreStationDataUnit - Class in beakedWhaleProtocol
 
ShoreStationDataUnit(long, LatLong, double) - Constructor for class beakedWhaleProtocol.ShoreStationDataUnit
 
ShoreStationGraphics - Class in beakedWhaleProtocol
 
ShoreStationGraphics(BeakedControl) - Constructor for class beakedWhaleProtocol.ShoreStationGraphics
 
ShoreStationLogging - Class in beakedWhaleProtocol
 
ShoreStationLogging(PamDataBlock) - Constructor for class beakedWhaleProtocol.ShoreStationLogging
 
SHORT_HIDEALL - Static variable in class whistlesAndMoans.WhistleToneParameters
 
SHORT_SHOWALL - Static variable in class whistlesAndMoans.WhistleToneParameters
Policy for showing short whistles on the spectrogram.
SHORT_SHOWGREY - Static variable in class whistlesAndMoans.WhistleToneParameters
 
SHORT_STRING_LENGTH - Static variable in class rocca.RoccaDetectionLogger
 
SHORT_STRING_LENGTH - Static variable in class rocca.RoccaStatsLogger
 
shortFilter - Variable in class clickDetector.ClickParameters
 
shortLength - Variable in class whistlesAndMoans.WhistleToneParameters
Length of short whistles.
shortScaleNames - Static variable in class videoRangePanel.VRParameters
 
shortShowPolicy - Variable in class whistlesAndMoans.WhistleToneParameters
 
shouldCancel() - Method in class Acquisition.rona.RonaGatherer
 
shouldNotify() - Method in class Array.HydrophoneDataBlock
 
shouldNotify() - Method in class IMU.IMUDataBlock
 
shouldNotify() - Method in class Map.MapCommentDataBlock
 
shouldNotify() - Method in class PamguardMVC.PamDataBlock
 
shouldNotify() - Method in class targetMotionModule.TargetMotionDataBlock
 
shouldPlot - Variable in class Map.MapDetectionData
 
shouldPoll() - Method in interface depthReadout.DepthSystem
DepthProcess should ask this system for data every so often if this return false, then the data are comign from somewhere beyond the immediate contron of Pamgaurd and we just wait for it to arrive.
shouldPoll() - Method in class depthReadout.MccDepthSystem
 
shouldScroll(int) - Method in class PamView.sliders.PamRangeSliderUI.RangeTrackListener
 
shouldSelectCell(EventObject) - Method in class likelihoodDetectionModule.AbstractCellEditor
 
shouldStop() - Method in class pamScrollSystem.LoadingDataDialog
 
shouldStore(AcousticDataUnit) - Method in class clipgenerator.StandardClipBudgetMaker
Should store a data unit.
show(AISControl) - Static method in class AIS.AISStringsTable
 
show(NMEAControl) - Static method in class NMEA.NMEAStringsTable
 
show(JFrame, Point, PamDataBlock) - Static method in class PamView.ObserverListPopup
 
Show() - Static method in class PamView.PamObjectViewer
 
show(Window, PamSymbol, int, int) - Static method in class PamView.PamSymbolDialog
Show the dialog as a specific x,y, location
show(Window, PamSymbol) - Static method in class PamView.PamSymbolDialog
Show the dialog at a default (or most recent) location
SHOW_ALL - Static variable in class clickDetector.offlineFuncs.OfflineEventListPanel
show all events
SHOW_MAP - Static variable in class clickDetector.NewClickOverlayGraphics
 
SHOW_RADAR - Static variable in class clickDetector.NewClickOverlayGraphics
 
SHOW_SELECTION - Static variable in class clickDetector.offlineFuncs.OfflineEventListPanel
Show only those events which overlap the current loaded click data.
SHOW_SPECTROGRAM - Static variable in class clickDetector.NewClickOverlayGraphics
 
showAmplitudeFrame(ClickControl, ClickBTDisplay) - Static method in class clickDetector.BTAmplitudeSelector
 
showANDEvents - Variable in class clickDetector.BTDisplayParameters
 
showArrayDialog(Frame) - Method in class Array.ArrayManager
 
showASIOControl() - Method in class asiojni.NewAsioSoundSystem
 
showCalibrationDialog(int) - Method in class difar.DifarControl
Shows the calibration dialog for a particular channel.
showClasses() - Method in class rocca.RoccaParametersDialog
Loads the stage 1 classifier and populates the drop-down box with the classes
showClick(ClickDetection) - Method in class clickDetector.ClickWaveform
 
showClicksChanged() - Method in class clickDetector.offlineFuncs.OfflineToolbar
 
showComponent(boolean) - Method in class clickDetector.tdPlots.ClickHidingDialog
 
showComponent(boolean) - Method in class dataMap.ScalePanel
 
showComponent(boolean) - Method in class dataMap.SummaryPanel
 
showComponent(boolean) - Method in class dataPlots.layout.CompoundHidingDialog
 
showComponent(boolean) - Method in class dataPlots.layout.TDGraphHidingDialog
 
showComponent(boolean) - Method in class Map.hiddenControls.HiddenSlider
 
showComponent(boolean) - Method in class PamView.hidingpanel.HidingDialogComponent
Called when the component is about to be set visible or hidden.
showComponent(boolean) - Method in class Spectrogram.SpectrogramHidingPanel
 
showComponents() - Method in class videoRangePanel.panels.VRTabPanelControl
 
showContourOutline - Variable in class whistlesAndMoans.WhistleToneParameters
Show the full contour outline - not just the peak line
showControlledUnit(PamControlledUnit) - Method in class PamController.PamController
 
showControlledUnit(PamControlledUnit) - Method in class PamView.GuiFrameManager
 
showControlledUnit(PamControlledUnit) - Method in class PamView.PamGui
 
showControlledUnit(PamControlledUnit) - Method in class PamView.PamObjectViewer
 
showControlledUnit(PamControlledUnit) - Method in class PamView.PamView
tells the view to show the main display panel of a pamControlledUnit
showControlledUnit(PamControlledUnit) - Method in interface PamView.PamViewInterface
 
showControls() - Method in class PamUtils.LatLongDialogStrip
 
showDatagramDialog(boolean) - Method in class dataGram.DatagramManager
 
showDecimators - Variable in class noiseBandMonitor.NoiseBandSettings
 
showDialog(Frame, AcquisitionControl, AcquisitionParameters) - Static method in class Acquisition.AcquisitionDialog
Shows the data acquisition dialog.
showDialog(Window, FolderInputSystem) - Static method in class Acquisition.CheckWavFileHeaders
 
showDialog(Window, OfflineFileServer) - Static method in class Acquisition.offlineFuncs.FileMapMakingdialog
 
showDialog(Frame, AirgunParameters) - Static method in class AirgunDisplay.AirgunParametersDialog
 
showDialog(Frame, AISParameters) - Static method in class AIS.AISDisplayDialog
 
showDialog(Frame, AISParameters) - Static method in class AIS.AISSettingsDialog
 
showDialog(Window, AlarmSerialSettings) - Static method in class alarm.actions.serial.AlarmSerialDialog
 
showDialog(Window, PlaySound) - Static method in class alarm.actions.sound.PlaySoundDialog
 
showDialog(Window, AlarmControl) - Static method in class alarm.AlarmDialog
 
showDialog(Frame, AmpParameters, AmpControl) - Static method in class amplifier.AmpDialog
 
showDialog(Frame, AngleControl, AngleParameters) - Static method in class angleMeasurement.AngleCalibrationDialog
 
showDialog(Frame, FluxgateWorldAngles, FluxgateWorldParameters) - Static method in class angleMeasurement.FluxgateWorldDialog
 
showDialog(Frame, AngleVeto) - Static method in class angleVetoes.AngleVetoDialog
 
showDialog(Frame, AngleVetoes) - Static method in class angleVetoes.AngleVetoesDialog
 
showDialog(Window, SpectrogramAnnotationModule, MarkDataUnit) - Static method in class annotationMark.MarkAnnotationDialog
 
showDialog(Frame, ArrayManager) - Static method in class Array.ArrayDialog
Open main dialog for hydrophone array configuration
showDialog(Window, Hydrophone, boolean, PamArray) - Static method in class Array.HydrophoneElementDialog
 
showDialog(Frame, StreamerImportParams) - Static method in class Array.importHydrophoneData.StreamerOriginDialog
 
showDialog(Window, PamArray, Streamer) - Static method in class Array.StreamerDialog
 
showDialog(Window, ArrayAccelControl, ArrayAccelParams) - Static method in class ArrayAccelerometer.ArrayAccelDialog
 
showDialog(Frame, BeakedControl, BeakedParameters) - Static method in class beakedWhaleProtocol.BeakedDialog
 
showDialog(BeakedControl, VRDataUnit) - Static method in class beakedWhaleProtocol.BeakedLocationDialog
 
showDialog(Window) - Static method in class binaryFileStorage.BinaryMapMakingDialog
 
showDialog(Window, BinaryStoreSettings) - Static method in class binaryFileStorage.BinaryStorageDialog
 
showDialog(Window, AbstractWekaClassifier) - Static method in class classifier.WekaOptionsDialog
 
showDialog(Window, ClickControl, ClickAlarmParameters) - Static method in class clickDetector.alarm.ClickAlarmDialog
 
showDialog(Frame, ClickControl, BasicClickIdParameters, ClickTypeParams) - Static method in class clickDetector.ClickClassifiers.basic.ClickTypeDialog
New constructor required in order to pass clickControl object, so that we can access the alarm list through clickParameters
showDialog(Frame, BasicClickIdParameters, ClickTypeParams) - Static method in class clickDetector.ClickClassifiers.basic.ClickTypeDialog
 
showDialog(Window, ClickControl, SweepClassifier, SweepClassifierSet) - Static method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog
New constructor required in order to pass clickControl object, so that we can access the alarm list through clickParameters
showDialog(Window, SweepClassifier, SweepClassifierSet) - Static method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog
 
showDialog(ClickControl, Frame, ClickParameters) - Static method in class clickDetector.ClickClassifiers.ClickClassifyDialog
 
showDialog(Frame, BasicClickIdParameters, float) - Static method in class clickDetector.ClickClassifiers.ClickTypesDialog
 
showDialog(Window, Point, ClickSpectrum, ClickSpectrumParams) - Static method in class clickDetector.ClickSpectrumDialog
 
showDialog(Window, Point, ClickSpectrum, ClickSpectrumTemplateParams) - Static method in class clickDetector.ClickSpectrumTemplateDialog
 
showDialog(Window, Point, ClickSpectrum, ClickSpectrumTemplateParams, ClickControl) - Static method in class clickDetector.ClickSpectrumTemplateEditDialog
Creates an instance of the edit template dialog, associated with the Click Spectrum window it was opened from.
showDialog(Window, Point, ConcatenatedSpectParams) - Static method in class clickDetector.ConcatenatedSpectrogramdialog
 
showDialog(Frame, ClickParameters) - Static method in class clickDetector.dialogs.ClickAlarmDialog
 
showDialog(ClickControl, Window, BTDisplayParameters) - Static method in class clickDetector.dialogs.ClickDisplayDialog
 
showDialog(Frame, ClickParameters) - Static method in class clickDetector.dialogs.ClickMapDialog
 
showDialog(Frame, ClickControl, ClickParameters) - Static method in class clickDetector.dialogs.ClickParamsDialog
 
showDialog(Frame, ClickParameters) - Static method in class clickDetector.dialogs.ClickStorageOptionsDialog
 
showDialog(Frame, ClickParameters) - Static method in class clickDetector.dialogs.ClickTrainIdDialog
 
showDialog(Window, ClickParameters) - Static method in class clickDetector.dialogs.OverlayOptionsDialog
 
showDialog(Window, ClickWaveform, ClickParameters) - Static method in class clickDetector.dialogs.WaveDisplayDialog
 
showDialog(Window, EchoDetectionSystem) - Static method in class clickDetector.echoDetection.EchoDialog
 
showDialog(Window, Point, IDI_DisplayParams) - Static method in class clickDetector.IDI_DisplayDialog
 
showDialog(Window, ClickControl) - Static method in class clickDetector.offlineFuncs.DatabaseCheckDialog
 
showDialog(Window, OfflineEventDataUnit) - Static method in class clickDetector.offlineFuncs.EditOfflineEventDialog
 
showDialog(Window, ClickControl) - Static method in class clickDetector.offlineFuncs.EventListDialog
 
showDialog(Window, ClickControl, ClickBTDisplay, ClickDetection) - Static method in class clickDetector.offlineFuncs.LabelClicksDialog
 
showDialog(Window, ClickControl, ClickBTDisplay) - Static method in class clickDetector.offlineFuncs.OfflienEventViewer
 
showDialog(Window, ClickControl, OfflineEventDataUnit) - Static method in class clickDetector.offlineFuncs.OfflineEventDialog
 
showDialog(Window, ClickControl, ClickBTDisplay) - Static method in class clickDetector.offlineFuncs.OfflineEventViewer
 
showDialog(Window, ClickControl, BinaryStore) - Static method in class clickDetector.offlineFuncs.rcImport.BatchRainbowFileConversion
 
showDialog(Frame, ClickControl, BinaryStore) - Static method in class clickDetector.offlineFuncs.rcImport.RainbowDatabaseConversion
 
showDialog(Window, ClickControl, ClickDetection, int[], double[], double) - Static method in class clickDetector.waveCorrector.WaveCorrector
 
showDialog(Frame, Point, WignerPlotOptions) - Static method in class clickDetector.WignerPlotdialog
 
showDialog(Window, ClipControl) - Static method in class clipgenerator.ClipDialog
 
showDialog(Window, ClipControl) - Static method in class clipgenerator.ClipDisplayDialog
 
showDialog(Window, ClipGenSetting, boolean) - Static method in class clipgenerator.ClipGenSettingDialog
 
showDialog(Window, CPODControl, CPODParams) - Static method in class cpod.CPODDialog
 
showDialog(Window, DatagramManager) - Static method in class dataGram.DatagramDialog
 
showDialog(Window, CancelObserver) - Static method in class dataGram.DatagramProgressDialog
 
showDialog(Window, DbHtAlarmCounter) - Static method in class dbht.alarm.DbHtAlarmParamsDialog
 
showDialog(DbHtControl, Window) - Static method in class dbht.DbHtDialog
 
showDialog(Window, DbHtControl, DbHtDisplayParams) - Static method in class dbht.DbHtDisplayDialog
 
showDialog(Window, DbHtSummaryParams) - Static method in class dbht.offline.DbHtSummaryDialog
 
showDialog(Frame, DecimatorControl, DecimatorParams) - Static method in class decimator.DecimatorParamsDialog
 
showDialog(Window, DStrControl, DStrParameters) - Static method in class decimus.summarystring.plots.DstrPlotDialog
 
showDialog(DepthControl, Frame, DepthSystem) - Static method in class depthReadout.DepthDialog
 
showDialog(DepthControl, MccDepthSystem, Frame, MccDepthParameters) - Static method in class depthReadout.MccDialog
 
showDialog(Window, DifarControl, int) - Static method in class difar.calibration.CalibrationDialog
 
showDialog(Window, DifarControl, DifarParameters) - Static method in class difar.dialogs.DifarDisplayParamsDialog
 
showDialog(Window, DifarControl, DifarParameters) - Static method in class difar.dialogs.DifarParamsDialog
 
showDialog(Frame, EchoProcessParameters) - Static method in class echoDetector.EchoParametersDialog
 
showDialog(Frame, EdgeParameters) - Static method in class EdgeDetector.EdgeParamsDialog
 
showDialog(Window, EnvelopeParams) - Static method in class envelopeTracer.EnvelopeDialog
 
showDialog(Window, FFTFilterParams) - Static method in class fftFilter.FFTFilterDialog
 
showDialog(Frame, FFTParameters, SpectrogramNoiseProcess) - Static method in class fftManager.FFTParametersDialog
 
showDialog(Frame, FFTPluginPanelProvider.FFTPluginPanel, FFTDataDisplayOptions) - Static method in class fftManager.FFTPluginParamsDialog
 
showDialog(Window) - Static method in class fileOfflineData.OfflineFileProgressDialog
 
showDialog(Window, OfflineFileControl) - Static method in class fileOfflineData.OfflineFilesDialog
 
showDialog(FilterParameters_2, Frame, PamDataBlock) - Static method in class Filters.FilterDataSourceDialog
 
showDialog(Window, FilterParams, float) - Static method in class Filters.FilterDialog
 
showDialog(Frame) - Static method in class generalDatabase.DatabaseSpeedDialog
 
showDialog() - Method in class generalDatabase.dataExport.DataExportDialog
 
showDialog(Window, ValueFilter, Point) - Static method in class generalDatabase.dataExport.ValueFilterDialog
 
showDialog(DBControl, Frame, DBParameters) - Static method in class generalDatabase.DBDialog
 
showDialog(Frame) - Static method in class generalDatabase.DBMapMakingDialog
 
showDialog(Window, LookupList) - Static method in class generalDatabase.lookupTables.LookupEditDialog
 
showDialog(Frame, GPSParameters) - Static method in class GPS.GPSParametersDialog
 
showDialog(Window, Point, ImportGPSParams, ImportGPSData) - Static method in class GPS.ImportGGADialog
 
showDialog(Window, Point, ImportGPSParams, ImportGPSData) - Static method in class GPS.ImportGPSDialog
 
showDialog(Frame, GPSControl, GPSParameters, boolean) - Static method in class GPS.UpdateClockDialog
Show the UpdateClock dialog
showDialog(Window, IMUParams) - Static method in class IMU.IMUCalibrationDialog
 
showDialog(Frame, IMUControl, IMUImportMananger) - Static method in class IMU.IMUImportDialog
 
showDialog(Frame, IMUControl) - Static method in class IMU.IMUSettingsDialog
 
showDialog(Frame, IpiProcessParameters) - Static method in class ipiDemo.IpiParametersDialog
 
showDialog(Frame, KernelSmoothingParameters, PamDataBlock) - Static method in class KernelSmoothing.KernelSmoothingDialog
 
showDialog(Window, LandmarkControl, LandmarkData) - Static method in class landMarks.LandmarkDialog
 
showDialog(Window, LandmarkControl) - Static method in class landMarks.LandmarksDialog
 
showDialog(Window, LevelMeterControl) - Static method in class levelMeter.LevelMeterDialog
 
showDialog(Frame, LikelihoodDetectionParameters) - Static method in class likelihoodDetectionModule.LikelihoodDetectionParametersDialog
Show dialog the dialog.
showDialog() - Method in class likelihoodDetectionModule.NewBandNameDialog
Show dialog.
showDialog() - Method in class likelihoodDetectionModule.TargetConfigurationNameDialog
Show dialog.
showDialog(ListeningControl, Frame, ListeningParameters) - Static method in class listening.ListeningDialog
 
showDialog(Frame, TowedArray3DController, TowedArray3DProcessParameters) - Static method in class loc3d_Thode.TowedArray3DParametersDialog
 
showDialog(Window, DelayMeasurementParams) - Static method in class Localiser.bearingLocaliser.DelayOptionsDialog
 
showDialog(Window, Point, LikelihoodSurfaceParams) - Static method in class Localiser.timeDelayLocalisers.LikelihoodSurfaceDialog
 
showDialog(Frame, MCMCParams) - Static method in class Localiser.timeDelayLocalisers.MCMCParamsDialog
 
showDialog(FormEditor) - Static method in class loggerForms.formdesign.FormEditDialog
 
showDialog(Window, FormDescription, FormsDataUnit) - Static method in class loggerForms.FormsDataUnitEditDialog
 
showDialog(Window, FormsControl) - Static method in class loggerForms.FormsPlotOptionsDialog
 
showDialog(Frame, LtsaControl, LtsaParameters) - Static method in class ltsa.LtsaDialog
 
showDialog(Frame, MapPanel, Point, MapComment) - Static method in class Map.MapCommentDialog
 
showDialog(Frame, MapDetectionsManager) - Static method in class Map.MapDetectionsDialog
 
showDialog(Frame, MapParameters, MapFileManager) - Static method in class Map.MapParametersDialog
 
showDialog(NetworkEmulator, Window) - Static method in class networkTransfer.emulator.EmulateDialog
 
showDialog(Window, NetworkReceiver) - Static method in class networkTransfer.receive.NetworkReceiveDialog
 
showDialog(Window, NetworkSender, NetworkSendParams) - Static method in class networkTransfer.send.NetworkSendDialog
 
showDialog(Frame, NMEAParameters) - Static method in class NMEA.NMEAParametersDialog
 
showDialog(Frame, NMEAParameters) - Static method in class NMEA.NMEASimDialog
 
showDialog(Frame, NMEAFrontEnd) - Static method in class nmeaEmulator.NMEAOutdialog
 
showDialog(Window, NMEAEmulatorParams) - Static method in class nmeaEmulator.TimesDialog
 
showDialog(Window, NoiseBandControl) - Static method in class noiseBandMonitor.NoiseBandDialog
 
showDialog(Window, NoiseAlarmParameters, NoiseDataBlock) - Static method in class noiseMonitor.alarm.NoiseAlarmDialog
 
showDialog(NoiseControl, Frame, NoiseSettings) - Static method in class noiseMonitor.NoiseDialog
 
showDialog(Window, NoiseDisplaySettings) - Static method in class noiseMonitor.NoiseDisplayDialog
 
showDialog(Window, NoiseMeasurementBand, FFTDataBlock) - Static method in class noiseMonitor.UserBandDialog
 
showDialog(Window, OneBandAlarmCounter) - Static method in class noiseOneBand.alarm.OneBandAlarmParamsDialog
 
showDialog(Window, OneBandSummaryParams) - Static method in class noiseOneBand.offline.OneBandSummaryDialog
 
showDialog(OneBandControl, Window) - Static method in class noiseOneBand.OneBandDialog
 
showDialog(Window, OneBandControl, OneBandDisplayParams) - Static method in class noiseOneBand.OneBandDisplayDialog
 
showDialog(PamController, Frame) - Static method in class PamController.ModuleOrderDialog
 
showDialog(Frame, PamModuleInfo, String) - Static method in class PamController.NewModuleDialog
 
showDialog(Frame, SettingsFileData) - Static method in class PamController.SettingsFileDialog
 
showDialog(JFrame) - Method in class PamController.StorageOptions
 
showDialog(JFrame, StorageParameters) - Static method in class PamController.StorageOptionsDialog
 
showDialog() - Method in class PamguardMVC.dataSelector.DataSelectDialog
 
showDialog(Frame, String, Matrix, String[], String[]) - Static method in class pamMaths.MatrixDialog
 
showDialog(Window, String, String, String) - Static method in class PamModel.DeprecatedModuleDialog
 
showDialog(JFrame, PamModelSettings) - Static method in class PamModel.ThreadingDialog
 
showDialog(Window) - Static method in class pamScrollSystem.LoadingDataDialog
 
showDialog(Window, AbstractPamScrollerAWT, JComponent) - Static method in class pamScrollSystem.LoadOptionsDialog
 
showDialog(Window, LatLong, String) - Static method in class PamUtils.LatLongDialog
 
showDialog(Frame, LatLong) - Static method in class PamUtils.LatLongDialog
 
showDialog(Frame, String, FileImportParams, String[]) - Method in class PamView.importData.ImportDataDialog
 
showDialog(Window, String) - Static method in class PamView.ImportLoadBar
 
showDialog(Component) - Method in class PamView.JFontChooser
Show font selection dialog.
showDialog(String, String, int) - Method in class PamView.PamGui
 
showDialog(Frame, PamViewParameters) - Static method in class PamView.ViewTimesDialog
 
showDialog(Frame, PatchPanelParameters, PatchPanelControl) - Static method in class patchPanel.PatchPanelDialog
 
showDialog(Frame) - Static method in class performanceTests.PerformanceDialog
 
showDialog(RadarDisplay, Frame, RadarParameters, RadarProjector) - Static method in class radardisplay.RadarParametersDialog
 
showDialog(Window, RWEControl) - Static method in class RightWhaleEdgeDetector.RWEDialog
 
showDialog(Component, Component, String, String[], int[]) - Static method in class rocca.RoccaClickTypeDialog
Set up and show the dialog.
showDialog(Frame, RoccaParameters, RoccaControl) - Static method in class rocca.RoccaParametersDialog
 
showDialog(Frame, VetoParameters, PamDataBlock) - Static method in class seismicVeto.VetoParametersDialog
 
showDialog(Window, GridMovementParams) - Static method in class simulatedAcquisition.movement.GridMovementDialog
 
showDialog(Frame, SimProcess, SimObject) - Static method in class simulatedAcquisition.SimObjectDialog
 
showDialog(Window, SMLGainControl) - Static method in class smlGainControl.SMLGainDialog
 
showDialog(Window, SMLPingerControl) - Static method in class smlPingerControl.SMLPingerDialog
 
showDialog(Frame, PlaybackParameters, PlaybackControl) - Static method in class soundPlayback.PlaybackDialog
 
showDialog(Frame, RecorderSettings) - Static method in class SoundRecorder.RecorderSettingsDialog
 
showDialog(Window, RecorderTriggerData) - Static method in class SoundRecorder.trigger.TriggerOptionsDialog
 
showDialog(Window, SpectrogramParameters) - Static method in class Spectrogram.SpectrogramParamsDialog
 
showDialog(Frame, SpectrogramNoiseProcess, SpectrogramNoiseSettings) - Static method in class spectrogramNoiseReduction.SpectrogramNoiseDialog
 
showDialog(Window, StaticLocaliserControl, StaticLocaliserParams) - Static method in class staticLocaliser.alarm.SLAlarmOptions
 
showDialog(Window, MimplexParams, StaticLocalise) - Static method in class staticLocaliser.algorithms.MimplexDialog
Create a dialog to control the set paramters for the mimplex algorithm
showDialog(Window, Point, StaticLocaliserParams, ArrayList<ArrayList<Double>>) - Static method in class staticLocaliser.panels.ExportDelaysDialog
 
showDialog(Window, HyperbolicLocParams) - Static method in class staticLocaliser.panels.HyperbolicLocDialog
 
showDialog(Window, Point, StaticLocalisationMainPanel, StaticLocaliserParams, int) - Static method in class staticLocaliser.panels.OptionsDialog
 
showDialog(Window, Point, StaticLocalisationMainPanel) - Static method in class staticLocaliser.panels.UnsyncdataBlocks
 
showDialog(Frame, VRControl, VRMeasurement) - Static method in class videoRangePanel.panels.AcceptMeasurementDialog
 
showDialog(Frame, VRHeightData) - Static method in class videoRangePanel.panels.HeightDialog
 
showDialog(Frame, VRControl, LandMark, LatLong) - Static method in class videoRangePanel.panels.LandMarkAddDialog
 
showDialog(Frame, VRControl, LandMarkGroup) - Static method in class videoRangePanel.panels.LandMarkGroupDialog
 
showDialog(Frame, VRControl, LandMark) - Static method in class videoRangePanel.panels.ManualLocationDialog
 
showDialog(Frame, VRControl, VRCalibrationData) - Static method in class videoRangePanel.panels.VRCalibrationDialog
 
showDialog(Frame, VRControl) - Static method in class videoRangePanel.panels.VRParametersDialog
 
showDialog(Frame, VRControl, int) - Static method in class videoRangePanel.panels.VRParametersDialog
 
showDialog(Frame, WhistleClassifierControl) - Static method in class whistleClassifier.ClassifierTrainingDialog
 
showDialog(Frame, WhistleClassifierControl) - Static method in class whistleClassifier.training.ClassifierTrainingDialog
 
showDialog(Frame, WhistleClassifierControl) - Static method in class whistleClassifier.WhistleClassificationDialog
 
showDialog(Frame, WhistleControl, WhistleParameters, float) - Static method in class whistleDetector.WhistleParametersDialog
 
showDialog(Window, WMAlarmParameters) - Static method in class whistlesAndMoans.alarm.WMAlarmDialog
 
showDialog(Frame, WhistleMoanControl) - Static method in class whistlesAndMoans.WhistleToneDialog
 
showDialog(WhistleMoanControl, Window) - Static method in class whistlesAndMoans.WMDisplayDialog
 
showDialog(Window, WMRecorderTrigger, WMRecorderTriggerData) - Static method in class whistlesAndMoans.WMRecordTriggerdialog
 
showDialog(Frame, WILDParameters, WILDControl) - Static method in class WILDInterface.WILDParametersDialog
 
showDialog(Frame, WorkshopProcessParameters) - Static method in class WorkshopDemo.WorkshopParametersDialog
 
showDialog2(Frame, EnergySumParams) - Static method in class IshmaelDetector.EnergySumParamsDialog
 
showDialog2(Frame, MatchFiltParams) - Static method in class IshmaelDetector.MatchFiltParamsDialog
 
showDialog2(Frame, SgramCorrParams) - Static method in class IshmaelDetector.SgramCorrParamsDialog
 
showDialog2(Frame, IshLocHyperbParams, PamDataBlock) - Static method in class IshmaelLocator.IshLocHyperbParamsDialog
 
showDialog3(Frame, IshDetParams, IshDetParamsDialog) - Static method in class IshmaelDetector.IshDetParamsDialog
 
showDialog3(Frame, IshLocParams, IshLocParamsDialog) - Static method in class IshmaelLocator.IshLocParamsDialog
 
showDialogHM(Frame, MCMCParamsHM) - Static method in class Localiser.timeDelayLocalisers.MCMCParamsDialogHM
 
showDifarGramFreqLimits - Variable in class difar.DifarParameters
show detection limits on difargram - edited on right click
showDifarGramKey - Variable in class difar.DifarParameters
key on difargram - edited on right click
showDifarGramSummary - Variable in class difar.DifarParameters
summary line - addition of amplitude/angle withing frequency bands on difargram - edited on right click
showEchoes - Variable in class clickDetector.BTDisplayParameters
 
showEmulateDialog(Frame) - Method in class networkTransfer.emulator.NetworkEmulator
 
showEventInfo - Variable in class clickDetector.ClickSpectrumParams
 
showEventsOnly - Variable in class clickDetector.BTDisplayParameters
 
showGraphMenu(MouseEvent) - Method in class dataMap.DataStreamPanel
 
showGrid - Variable in class dbht.DbHtDisplayParams
 
showGrid - Variable in class noiseBandMonitor.NoiseBandSettings
 
showGrid - Variable in class noiseMonitor.NoiseDisplaySettings
 
showGrid - Variable in class noiseOneBand.OneBandDisplayParams
 
showHideGraph() - Method in class dataMap.ScrollingDataPanel
 
showHidingDialog(boolean) - Method in class PamView.hidingpanel.HidingDialogPanel
show the hiding dialog
showHydrophoneImportDialog(JFrame) - Method in class Array.ArrayManager
 
showImportDialog() - Method in class PamView.importData.ImportDataSystem
 
showKey - Variable in class clickDetector.BTDisplayParameters
 
showKey - Variable in class noiseMonitor.NoiseDisplaySettings
 
showLine - Variable in class beakedWhaleProtocol.BeakedParameters
 
showLoadBar(boolean) - Method in class targetMotionModule.panels.TargetMotionMainPanel
 
showLoadPeriod(Graphics) - Method in class dataMap.DataStreamPanel.DataGraph
Draw on the chart the period of data loaded into memory.
showMap(boolean) - Method in class staticLocaliser.panels.Map
 
showMap(boolean) - Method in class staticLocaliser.panels.MapPanel3DSL
 
showMap(boolean) - Method in class targetMotionModule.panels.MapPanel
 
showMap(boolean) - Method in class targetMotionModule.panels.MapPanel2D
 
showMap(boolean) - Method in class targetMotionModule.panels.MapPanel3D
 
showMap(boolean) - Method in class targetMotionOld.dialog.DialogMap
 
showMap(boolean) - Method in class targetMotionOld.dialog.DialogMap2D
 
showMap(boolean) - Method in class targetMotionOld.dialog.DialogMap3D
 
showMapObjects() - Method in class Map.SimpleMap
 
showMenu(MouseEvent) - Method in class noiseMonitor.NoiseTabPanel
 
showMore(HidingDialog) - Method in class clickDetector.tdPlots.ClickHidingDialog
 
showMore(HidingDialog) - Method in class dataPlots.layout.CompoundHidingDialog
 
showMore(HidingDialog) - Method in class Map.hiddenControls.HiddenSlider
 
showMore(HidingDialog) - Method in class PamView.hidingpanel.HidingDialogComponent
Get's called from the More button, which shows if hasMore is returning true.
showMore(HidingDialog) - Method in class Spectrogram.SpectrogramHidingPanel
 
showMouseData(Point, Point) - Method in class Map.MouseMeasureDisplay
 
ShowObjectList() - Static method in class PamView.PamObjectList
 
showOfflineEvents(Frame) - Method in class clickDetector.ClickControl
Show a list of offline events.
showOnlyLowestChiValueDelay - Variable in class staticLocaliser.StaticLocaliserParams
in the results table, show all possible localisation results or simply the best fit result.
showOptions(Window, GeneralProjector) - Method in class AirgunDisplay.AirgunGraphics
 
showOptions(Window) - Method in class alarm.AlarmCounter
Show module specific options
showOptions(Window, GeneralProjector) - Method in class annotationMark.MarkOverlayDraw
 
showOptions(Window, GeneralProjector) - Method in class Array.StreamerOverlayGraphics
 
showOptions(Window, GeneralProjector) - Method in class autecPhones.AutecGraphics
 
showOptions(Window, GeneralProjector) - Method in class beakedWhaleProtocol.BeakedExperimentGraphics
 
showOptions(Window, GeneralProjector) - Method in class beakedWhaleProtocol.BeakedGraphics
 
showOptions(Window, GeneralProjector) - Method in class beakedWhaleProtocol.ShoreStationGraphics
 
showOptions(Window) - Method in class clickDetector.alarm.ClickAlarmCounter
 
showOptions(Window, GeneralProjector) - Method in class clipgenerator.ClipOverlayGraphics
 
showOptions(Window) - Method in class dbht.alarm.DbHtAlarmCounter
 
showOptions(Window, DifarParameters) - Method in class difar.demux.AmmcDemux
 
showOptions(Window, DifarParameters) - Method in class difar.demux.DifarDemux
 
showOptions(Window, DifarParameters) - Method in class difar.demux.GreenridgeDemux
 
showOptions(Window, DifarParameters) - Method in class difar.demux.NativeDemux
 
showOptions(Window, GeneralProjector) - Method in class ishmaelComms.IshmaelGraphics
 
showOptions(Window, GeneralProjector) - Method in class landMarks.LandmarkGraphics
 
showOptions(Window, GeneralProjector) - Method in class listening.ListeningEffortGraphics
 
showOptions(Window, GeneralProjector) - Method in class listening.ThingHeardGraphics
 
showOptions(Window, GeneralProjector) - Method in class loggerForms.LoggerFormGraphics
 
showOptions(Window, GeneralProjector) - Method in class networkTransfer.receive.NetworkGPSDrawing
 
showOptions(Window) - Method in class noiseMonitor.alarm.NoiseAlarmCounter
 
showOptions(Window) - Method in class noiseOneBand.alarm.OneBandAlarmCounter
 
showOptions(Window, GeneralProjector) - Method in class PamguardMVC.PamObservable
 
showOptions(Window, GeneralProjector) - Method in class PamView.PamDetectionOverlayGraphics
 
showOptions(Window, GeneralProjector) - Method in interface PamView.PanelOverlayDraw
Show an options dialog for a particular projector.
showOptions(Window, SimObject) - Method in class simulatedAcquisition.movement.GridMovement
 
showOptions(Window, SimObject) - Method in class simulatedAcquisition.movement.MovementModel
Show options dialog.
showOptions(Window, GeneralProjector) - Method in class simulatedAcquisition.SimGraphics
 
showOptions(Window) - Method in class staticLocaliser.alarm.SLAlarmCounter
 
showOptions(Window, GeneralProjector) - Method in class whistleDetector.PeakGraphics
 
showOptions(Window) - Method in class whistlesAndMoans.alarm.WMAlarmCounter
 
showOptionsDialog(Window, RecorderTriggerData) - Method in class clickDetector.ClickRecorderTrigger
 
showOptionsDialog(TDDataInfo) - Method in class dataPlots.layout.TDGraph
Show the options dialog for a particular data type
showOptionsDialog(Window, RecorderTriggerData) - Method in class SoundRecorder.trigger.RecorderTrigger
Show a dialog of additional options for the recorder trigger.
showOptionsDialog(Window, RecorderTriggerData) - Method in class whistlesAndMoans.WMRecorderTrigger
 
showPanel(boolean) - Method in class PamView.hidingpanel.HidingPanel
Show or hide the panel
showPanel(boolean) - Method in class PamView.hidingpanel.TabbedHidingPane.TabHidingPanel
 
showPanel(boolean) - Method in class PamView.HidingSidePanel
Show or side the active component of the side panel, Some basic border from the outer panel will always be visible unless the entire thing is hidden because there are no side panel controls available.
showParametersDialog(Frame) - Method in class Map.SimpleMap
 
showParamsDialog(Window) - Method in class classifier.AbstractWekaClassifier
 
showParamsDialog(Window) - Method in class classifier.Classifier
 
showParamsDialog1(Frame) - Method in class IshmaelDetector.EnergySumControl
 
showParamsDialog1(Frame) - Method in class IshmaelDetector.IshDetControl
 
showParamsDialog1(Frame) - Method in class IshmaelDetector.MatchFiltControl
 
showParamsDialog1(Frame) - Method in class IshmaelDetector.SgramCorrControl
 
showPeaks() - Method in class rocca.RoccaSpecPopUp
 
showPluginDisplay - Variable in class Spectrogram.SpectrogramParameters
 
showPopupMenu(JPanel, Point) - Method in class clickDetector.ConcatenatedSpectrogram.MShowPopUpMenu
 
showPopupMenu(MouseEvent) - Method in class clickDetector.offlineFuncs.EventListDialog
 
showPopupMenu(MouseEvent) - Method in class dataMap.SettingsStrip
 
showPopupMenu(MouseEvent) - Method in class difar.calibration.CalibrationDialog
 
showPopupMenu(MouseEvent) - Method in class generalDatabase.lookupTables.LookupComponent
 
showPopupMenu(JPanel, Point) - Method in class Localiser.timeDelayLocalisers.LikelihoodSurface.MShowPopUpMenu
 
showPopupMenu(MouseEvent) - Method in class loggerForms.formdesign.ControlTitle
 
showPopupMenu(JPanel, Point) - Method in class PamGraph3D.MouseRightClickMenu
 
showPopupMenu(JPanel, Point) - Method in class staticLocaliser.panels.MapPanel3DSL.MShowPopUpMenu
 
showPopupMenu(JPanel, Point) - Method in class targetMotionModule.panels.MapPanel3D.MShowPopUpMenu
 
showPopupMenu(JPanel, Point) - Method in class targetMotionOld.dialog.DialogMap3D.MShowPopUpMenu
 
showPredictionArrow - Variable in class AIS.AISParameters
 
showProcesslessModules - Variable in class PamView.PamObjectViewerSettings
 
showProcesslessObservers - Variable in class PamView.PamObjectViewerSettings
 
showProgress(DatagramProgress, DatagramManager.DatagramCreator) - Method in class dataGram.DatagramManager
 
showQuestion(String) - Method in class PamView.PamDialog
Ask a yes no question and return true if yes was selected
showQuestion(String, String) - Method in class PamView.PamDialog
Ask a yes no question and return true if yes was selected
showQuestion(Window, String, String) - Method in class PamView.PamDialog
Ask a yes no question and return true if yes was selected
showSampleSettingsDialog(AcquisitionDialog) - Method in class Acquisition.DaqSystem
 
showSampleSettingsDialog(AcquisitionDialog) - Method in class asiojni.ASIOSoundSystem
 
showScale - Variable in class Spectrogram.SpectrogramParameters
 
showSelectDialog(Window) - Method in class PamguardMVC.dataSelector.DataSelector
 
showShore - Variable in class videoRangePanel.VRParameters
draw the shore line on the map
showShorePoints - Variable in class videoRangePanel.VRParameters
also highlight points on the map file (to check resolution).
showShortTrains - Variable in class clickDetector.ClickParameters
 
showStreamerImportDialog(JFrame) - Method in class Array.ArrayManager
 
showString(char[]) - Method in class nidaqdev.Nidaq
Mostly used as a callback from the C side to show string messages
showSubForm() - Method in class loggerForms.controls.SubFormControl
 
ShowTabSpecificSettings() - Method in class PamView.PamGui
Set up specific settings for the tab - get's called quite a lot, including whenever modules are added or removed in order to make sure that menus contain the correct options for existing modules.
showTail - Variable in class AIS.AISParameters
 
showTip(TipOfTheDayManager, Window, PamTip) - Static method in class tipOfTheDay.PamTipViewer
 
showTip(Window, PamTip) - Method in class tipOfTheDay.TipOfTheDayManager
 
showTMDialog(T) - Method in class targetMotionOld.TargetMotionLocaliser
 
showTriggerOverlay - Variable in class clipgenerator.clipDisplay.ClipDisplayParameters
 
showUnassignedICI - Variable in class clickDetector.BTDisplayParameters
 
showVesselBearings - Variable in class difar.DifarParameters
 
showWarning(String) - Method in class PamView.PamDialog
Display a warning message with a default title
showWarning(Window, String, String) - Static method in class PamView.PamDialog
 
showWarning(String, String) - Method in class PamView.PamDialog
Display a warning message with given title and text
showWaveform - Variable in class Spectrogram.SpectrogramParameters
Also show the waveform display under the spectrogram
showWhat - Variable in class dbht.DbHtDisplayParams
 
showWhat - Variable in class noiseOneBand.OneBandDisplayParams
 
SIDES_ALL - Static variable in class radardisplay.RadarParameters
 
SIDES_BACKHALF - Static variable in class radardisplay.RadarParameters
 
SIDES_FRONTHALF - Static variable in class radardisplay.RadarParameters
 
SIDES_LEFTHALF - Static variable in class radardisplay.RadarParameters
 
SIDES_RIGHTHALF - Static variable in class radardisplay.RadarParameters
 
signal - package signal
 
signal - Variable in class likelihoodDetectionModule.normalizer.NormalizedData
 
signal - Variable in class RightWhaleEdgeDetector.RWESound
 
signalAlpha - Variable in class likelihoodDetectionModule.normalizer.DecayingAverageNormAlphas
 
SignalBand - Class in likelihoodDetectionModule
Represents the parameters that make up a signal band, used as input to the Likelihood detection algorithm.
SignalBand(AcquisitionSettings, LikelihoodFFTParameters) - Constructor for class likelihoodDetectionModule.SignalBand
Instantiates a new signal band.
signalName - Variable in class simulatedAcquisition.SimObject
Name of signal type, which is different to the name of this particular signal.
signalSeconds - Variable in class likelihoodDetectionModule.GuardBand
The signal seconds.
signalSeconds - Variable in class likelihoodDetectionModule.SignalBand
The signal seconds.
signalTimeConstant - Variable in class likelihoodDetectionModule.normalizer.NormalizerProcessTimeConstants
 
signalWidth - Variable in class likelihoodDetectionModule.normalizer.SplitWindowNormWidths
 
SIM_HEADING_MAGNETIC - Static variable in class NMEA.NMEAParameters
 
SIM_HEADING_NONE - Static variable in class NMEA.NMEAParameters
 
SIM_HEADING_TRUE - Static variable in class NMEA.NMEAParameters
 
SimDialogPanel - Class in simulatedAcquisition
 
SimDialogPanel(Frame, SimProcess) - Constructor for class simulatedAcquisition.SimDialogPanel
 
SimGraphics - Class in simulatedAcquisition
 
SimGraphics() - Constructor for class simulatedAcquisition.SimGraphics
 
simHeadingData - Variable in class NMEA.NMEAParameters
 
SimObject - Class in simulatedAcquisition
Information on a single simulated object
SimObject() - Constructor for class simulatedAcquisition.SimObject
 
SimObjectDataUnit - Class in simulatedAcquisition
SimObjectDataUnit is one per sound source, i.e.
SimObjectDataUnit(SimProcess, SimObject, long) - Constructor for class simulatedAcquisition.SimObjectDataUnit
 
SimObjectDialog - Class in simulatedAcquisition
 
SimObjectsDataBlock - Class in simulatedAcquisition
 
SimObjectsDataBlock(AcquisitionProcess) - Constructor for class simulatedAcquisition.SimObjectsDataBlock
 
SimParameters - Class in simulatedAcquisition
Parameters for all simulated objects
SimParameters() - Constructor for class simulatedAcquisition.SimParameters
 
SIMPLE_MCMC_LOCSHAPE - Static variable in class staticLocaliser.algorithms.MarkovChainSL
Flag for simple locShape.
SimpleAlarmCounter - Class in alarm
 
SimpleAlarmCounter(AlarmControl) - Constructor for class alarm.SimpleAlarmCounter
 
SimpleControl - Class in loggerForms.controls
class to extend- to be used for any control with only one data input field
SimpleControl(ControlDescription, LoggerForm) - Constructor for class loggerForms.controls.SimpleControl
 
SimpleEchoDetectionSystem - Class in clickDetector.echoDetection
Very simple echo detection system which uses a single test of time between the previous click and this click to determine if it's an echo or not.
SimpleEchoDetectionSystem(ClickControl) - Constructor for class clickDetector.echoDetection.SimpleEchoDetectionSystem
 
SimpleEchoDetector - Class in clickDetector.echoDetection
 
SimpleEchoDetector(SimpleEchoDetectionSystem, ClickControl, ClickDetector.ChannelGroupDetector, int) - Constructor for class clickDetector.echoDetection.SimpleEchoDetector
 
SimpleEchoDialogPanel - Class in clickDetector.echoDetection
 
SimpleEchoDialogPanel(SimpleEchoDetectionSystem) - Constructor for class clickDetector.echoDetection.SimpleEchoDialogPanel
 
SimpleEchoParams - Class in clickDetector.echoDetection
 
SimpleEchoParams() - Constructor for class clickDetector.echoDetection.SimpleEchoParams
 
SimpleHydrophoneLocator - Class in Array
Some abstract class function for hydrophone location that are used by more concrete locators, in particular the StaticHydrophoneLocator and StraightHydrophoneLocators
SimpleHydrophoneLocator(PamArray, Streamer) - Constructor for class Array.SimpleHydrophoneLocator
 
simpleLLD2PanelPoint(LatLongMinutes, LatLongMinutes, double, double, double, double, int, int) - Method in class Map.TransformUtilities
 
SimpleMap - Class in Map
Mainly a container for map objects, holding the main MapPanel and the right hand control items.
SimpleMap(MapController, boolean) - Constructor for class Map.SimpleMap
 
simpleMapGridResolution(double, double, double, LatLong) - Static method in class Map.TransformUtilities
 
simpleMapGridResolution(CoordsXY, double, LatLong) - Static method in class Map.TransformUtilities
 
simpleMapGridResolution(double, double, double, LatLongMinutes) - Static method in class Map.TransformUtilities
 
simpleMapGridResolution(CoordsXY, double, LatLongMinutes) - Static method in class Map.TransformUtilities
 
SimpleSymbolChooser - Class in dataPlots.data
 
SimpleSymbolChooser() - Constructor for class dataPlots.data.SimpleSymbolChooser
 
Simplex - Class in Localiser.timeDelayLocalisers
Time delay based simplex method for localisation.
Simplex(ArrayList<ArrayList<Point3f>>, ArrayList<ArrayList<Double>>, ArrayList<ArrayList<Double>>, float, float) - Constructor for class Localiser.timeDelayLocalisers.Simplex
 
Simplex() - Constructor for class Localiser.timeDelayLocalisers.Simplex
 
Simplex.Chi2 - Class in Localiser.timeDelayLocalisers
Calculate chi2 for different jump locations.
Simplex.Chi2() - Constructor for class Localiser.timeDelayLocalisers.Simplex.Chi2
 
Simplex2D - Class in targetMotionModule.algorithms
 
Simplex2D(TargetMotionLocaliser) - Constructor for class targetMotionModule.algorithms.Simplex2D
 
Simplex2D<T extends PamDetection> - Class in targetMotionOld
Reinstated Target motion add-in as used by the click detector.
Simplex2D(TargetMotionLocaliser<T>) - Constructor for class targetMotionOld.Simplex2D
 
Simplex3D - Class in targetMotionModule.algorithms
 
Simplex3D(TargetMotionLocaliser) - Constructor for class targetMotionModule.algorithms.Simplex3D
 
Simplex3D<T extends PamDetection> - Class in targetMotionOld
Reinstated Target motion add-in as used by the click detector.
Simplex3D(TargetMotionLocaliser<T>) - Constructor for class targetMotionOld.Simplex3D
 
Simplex3DStatic - Class in staticLocaliser.algorithms
Simplex3D for the static localiser.
Simplex3DStatic(StaticLocalise) - Constructor for class staticLocaliser.algorithms.Simplex3DStatic
 
Simplex3DTD - Class in targetMotionModule.algorithms
 
Simplex3DTD(TargetMotionLocaliser) - Constructor for class targetMotionModule.algorithms.Simplex3DTD
 
SimProcess - Class in simulatedAcquisition
Simulation of simulated sound.
SimProcess(AcquisitionControl) - Constructor for class simulatedAcquisition.SimProcess
 
SimReceivedSound - Class in simulatedAcquisition
 
SimReceivedSound(long, double[]) - Constructor for class simulatedAcquisition.SimReceivedSound
 
SimSignal - Class in simulatedAcquisition.sounds
Class to hold information and generate a signal of a specific type
SimSignal() - Constructor for class simulatedAcquisition.sounds.SimSignal
 
SimSignals - Class in simulatedAcquisition.sounds
Class to list and manage different types of signals.
SimSignals(SimProcess) - Constructor for class simulatedAcquisition.sounds.SimSignals
 
SimSound - Class in simulatedAcquisition.sounds
Class to hold information on a single sound.
SimSound(SimObjectDataUnit, double, long, LatLong, double, PamVector, SimSignal) - Constructor for class simulatedAcquisition.sounds.SimSound
 
SimSoundDataBlock - Class in simulatedAcquisition
 
SimSoundDataBlock(String, PamProcess, int) - Constructor for class simulatedAcquisition.SimSoundDataBlock
 
SimSoundDataUnit - Class in simulatedAcquisition
One of these will be created for every sound produced by a SimObjectDataUnit.
SimSoundDataUnit(long, SimSound) - Constructor for class simulatedAcquisition.SimSoundDataUnit
 
SimSoundsLogging - Class in simulatedAcquisition
 
SimSpeedTest - Class in simulatedAcquisition
Quick test of NBHF click simulation test.
SimSpeedTest() - Constructor for class simulatedAcquisition.SimSpeedTest
 
simStartHeading - Variable in class NMEA.NMEAParameters
 
simStartLatitude - Variable in class NMEA.NMEAParameters
 
simStartLongitude - Variable in class NMEA.NMEAParameters
 
simStartSpeed - Variable in class NMEA.NMEAParameters
 
simThread - Variable in class NMEA.NMEAParameters
 
simTimeInterval - Variable in class NMEA.NMEAParameters
 
simulatedAcquisition - package simulatedAcquisition
 
simulatedAcquisition.movement - package simulatedAcquisition.movement
 
simulatedAcquisition.sounds - package simulatedAcquisition.sounds
 
simulatedValue - Variable in enum NMEA.NMEAParameters.NmeaSources
 
SINGLE_SELECTION - Static variable in class dataPlots.data.FoundDataUnit
Data unit was found by a single mouse click or finger tap.
singleInstance - Static variable in class PamView.ImportLoadBar
 
singlePulseThreshold - Variable in class noiseOneBand.OneBandParameters
 
SingletonDataBlock<Tunit extends PamDataUnit> - Class in PamguardMVC
Version of pamdatablock that always keeps one and only one dataUnit.
SingletonDataBlock(Class, String, PamProcess, int) - Constructor for class PamguardMVC.SingletonDataBlock
 
singleWavePlot - Variable in class clickDetector.ClickParameters
Single plot of waveforms on top of each other - rather than one per channel
SINGULARITY_NORTH_POLE - Static variable in class pamMaths.PamQuaternion
This defines the north pole singularity cutoff when converting from quaternions to Euler angles.
SINGULARITY_SOUTH_POLE - Static variable in class pamMaths.PamQuaternion
This defines the south pole singularity cutoff when converting from quaternions to Euler angles.
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class Acquisition.RawDataBinaryDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class AIS.AISBinaryDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class binaryFileStorage.BinaryDataSource
Convert data read back in in viewer mode into the correct type of PamDataUnit.
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class clickDetector.ClickBinaryDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class clipgenerator.ClipBinaryDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class dbht.DbHtDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class difar.DifarBinaryDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class GPS.GPSBinaryDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class loggerForms.FormsBinaryIO
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class ltsa.LtsaBinaryDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class noiseMonitor.NoiseBinaryDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class noiseOneBand.OneBandDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class RightWhaleEdgeDetector.RWEBinaryDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class whistlesAndMoans.WhistleBinaryDataSource
 
sinkData(BinaryObjectData, BinaryHeader, int) - Method in class xBatLogViewer.XBatLogBinaryStorage
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class Acquisition.RawDataBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class AIS.AISBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class binaryFileStorage.BinaryDataSource
Do something with module footer information
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class clickDetector.ClickBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class clipgenerator.ClipBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class dbht.DbHtDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class difar.DifarBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class GPS.GPSBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class loggerForms.FormsBinaryIO
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class ltsa.LtsaBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class noiseMonitor.NoiseBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class noiseOneBand.OneBandDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class RightWhaleEdgeDetector.RWEBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class whistlesAndMoans.WhistleBinaryDataSource
 
sinkModuleFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class xBatLogViewer.XBatLogBinaryStorage
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class Acquisition.RawDataBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class AIS.AISBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class binaryFileStorage.BinaryDataSource
Do something with module header information
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class clickDetector.ClickBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class clipgenerator.ClipBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class dbht.DbHtDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class difar.DifarBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class GPS.GPSBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class loggerForms.FormsBinaryIO
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class ltsa.LtsaBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class noiseMonitor.NoiseBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class noiseOneBand.OneBandDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class RightWhaleEdgeDetector.RWEBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class whistlesAndMoans.WhistleBinaryDataSource
 
sinkModuleHeader(BinaryObjectData, BinaryHeader) - Method in class xBatLogViewer.XBatLogBinaryStorage
 
sitInLoop() - Method in class PamController.command.NetworkController
Infinite loop.
six2eight(String, int) - Static method in class NMEA.NMEADataBlock
 
size() - Method in class landMarks.LandmarkDatas
 
size - Variable in class userDisplay.DisplayProviderParameters
 
SLAlarmCounter - Class in staticLocaliser.alarm
 
SLAlarmCounter(AlarmControl, StaticLocaliserControl) - Constructor for class staticLocaliser.alarm.SLAlarmCounter
 
SLAlarmOptions - Class in staticLocaliser.alarm
 
SLAlarmProvider - Class in staticLocaliser.alarm
 
SLAlarmProvider(StaticLocaliserControl) - Constructor for class staticLocaliser.alarm.SLAlarmProvider
 
SLAlgorithmModel - Interface in staticLocaliser.algorithms
This is the basic interface that allows a localisation algorithm to integrate with the static localiser.
slantAngle - Variable in class simulatedAcquisition.SimObject
Slant angle in degrees 90 = poinint up, -90 = pointint down
SLCSVLogging - Class in staticLocaliser
 
SLCSVLogging() - Constructor for class staticLocaliser.SLCSVLogging
 
SLCSVLogging.SortByChannel - Class in staticLocaliser
Sort an ArrayList by channel.
SLCSVLogging.SortByChannel() - Constructor for class staticLocaliser.SLCSVLogging.SortByChannel
 
sliceCount - Variable in class RightWhaleEdgeDetector.RWESound
 
SliceData - Class in whistlesAndMoans
 
sliceList - Variable in class RightWhaleEdgeDetector.RWESound
 
SlidingAverager - Class in likelihoodDetectionModule.normalizer
A simple sliding block averager.
SlidingAverager(int, boolean) - Constructor for class likelihoodDetectionModule.normalizer.SlidingAverager
 
SLMapGraphics - Class in staticLocaliser.mapping
 
SLMapGraphics(PamDataBlock, StaticLocaliserControl) - Constructor for class staticLocaliser.mapping.SLMapGraphics
 
SLMapping - Class in staticLocaliser.mapping
This class deals with converting static localisation results into lat-longs.
SLMapping(StaticLocaliserControl) - Constructor for class staticLocaliser.mapping.SLMapping
GPS Antennae info
SLNotification - Class in staticLocaliser.realtime
Class to pass back information from the SwingWorker handling the localisation queue.
SLNotification(int, long, long, int, int) - Constructor for class staticLocaliser.realtime.SLNotification
 
SLPanel - Interface in staticLocaliser.panels
This interface should be implemented for most panels in the static localiser.
SLResult - Class in staticLocaliser
Store the results for static localisation
SLResult(Long, AbstractSLAlgorithm) - Constructor for class staticLocaliser.SLResult
 
SLResult(Long, String) - Constructor for class staticLocaliser.SLResult
 
SLResultsAnalysis - Interface in staticLocaliser.resultsAnalysis
This class analyses results from the static localiser.
SLTableDefinition - Class in staticLocaliser
 
SLTableDefinition(String) - Constructor for class staticLocaliser.SLTableDefinition
 
SMLAsciiCommands - Class in smlPingerControl
ascii command set to send to SML Pinger
SMLAsciiCommands() - Constructor for class smlPingerControl.SMLAsciiCommands
 
SMLBinaryCommands - Class in smlPingerControl
 
SMLBinaryCommands() - Constructor for class smlPingerControl.SMLBinaryCommands
 
smlGainControl - package smlGainControl
 
SMLGainControl - Class in smlGainControl
Gain control module that can set voltages on SML preamps to control the gain and filter settings.
SMLGainControl(String) - Constructor for class smlGainControl.SMLGainControl
 
SMLGainDialog - Class in smlGainControl
 
SMLGainParameters - Class in smlGainControl
 
SMLGainParameters() - Constructor for class smlGainControl.SMLGainParameters
 
SMLGainSidePanel - Class in smlGainControl
 
SMLGainSidePanel() - Constructor for class smlGainControl.SMLGainSidePanel
 
SMLPingerCommands - Interface in smlPingerControl
 
smlPingerControl - package smlPingerControl
 
SMLPingerControl - Class in smlPingerControl
 
SMLPingerControl(String) - Constructor for class smlPingerControl.SMLPingerControl
 
smlPingerControl.data - package smlPingerControl.data
 
smlPingerControl.display - package smlPingerControl.display
 
SMLPingerDialog - Class in smlPingerControl
 
SMLPingerLogging - Class in smlPingerControl.data
 
SMLPingerLogging(SMLPingerControl, PamDataBlock) - Constructor for class smlPingerControl.data.SMLPingerLogging
 
SMLPingerParams - Class in smlPingerControl
 
SMLPingerParams() - Constructor for class smlPingerControl.SMLPingerParams
 
SMLPingerProcess - Class in smlPingerControl
 
SMLPingerProcess(SMLPingerControl) - Constructor for class smlPingerControl.SMLPingerProcess
 
SMLStatusData - Class in smlPingerControl.data
 
SMLStatusData() - Constructor for class smlPingerControl.data.SMLStatusData
 
SMLStatusDataBlock - Class in smlPingerControl.data
 
SMLStatusDataBlock(PamProcess) - Constructor for class smlPingerControl.data.SMLStatusDataBlock
 
SMLStatusDataUnit - Class in smlPingerControl.data
 
SMLStatusDataUnit(long, SMLStatusData) - Constructor for class smlPingerControl.data.SMLStatusDataUnit
 
SMLStatusException - Exception in smlPingerControl
 
SMLStatusException(String) - Constructor for exception smlPingerControl.SMLStatusException
 
SMLTemperaturePanel - Class in smlPingerControl.display
SML temperature display using the new time display system
SMLTemperaturePanel(SMLPingerControl) - Constructor for class smlPingerControl.display.SMLTemperaturePanel
 
SMLUnpackAsciiData - Class in smlPingerControl.data
 
SMLUnpackAsciiData() - Constructor for class smlPingerControl.data.SMLUnpackAsciiData
 
SMLUnpackStatusMessage - Interface in smlPingerControl
 
smoothData(double[], int) - Static method in class Filters.SmoothingFilter
Smooth data with a moving average filter.
SmoothingFilter - Class in Filters
Smoothing filter which is basically a moving abstract filter but it operates once on a finite amount of data and does not insert any delays (unlike MovingAveragefilter which handles infinite streams, but adds a delay)
SmoothingFilter() - Constructor for class Filters.SmoothingFilter
 
smoothingTime - Variable in class GPS.GPSParameters
GPS smoothing time in seconds.
smoothPlot - Variable in class clickDetector.ClickSpectrumParams
 
SMRU_RET_OK - Static variable in class hfDaqCard.SmruDaqJNI
 
SMRU_VAL_MASTER - Static variable in class hfDaqCard.SmruDaqJNI
 
SMRU_VAL_SLAVE - Static variable in class hfDaqCard.SmruDaqJNI
 
SMRU_VAL_SLAVE_MASTERED - Static variable in class hfDaqCard.SmruDaqJNI
 
SMRU_VAL_STANDALONE - Static variable in class hfDaqCard.SmruDaqJNI
 
SmruDaqDialogPanel - Class in hfDaqCard
 
SmruDaqDialogPanel(SmruDaqSystem) - Constructor for class hfDaqCard.SmruDaqDialogPanel
 
SmruDaqJNI - Class in hfDaqCard
Functions to interface with the SMRU Ltd DAQ card C code via JNI
SmruDaqJNI(SmruDaqSystem) - Constructor for class hfDaqCard.SmruDaqJNI
 
SmruDaqParameters - Class in hfDaqCard
 
SmruDaqSystem - Class in hfDaqCard
 
SmruDaqSystem(AcquisitionControl) - Constructor for class hfDaqCard.SmruDaqSystem
 
SMRUEnable - Class in PamModel
 
SMRUEnable() - Constructor for class PamModel.SMRUEnable
 
snr() - Method in class likelihoodDetectionModule.normalizer.NormalizedData
This method returns the signal to noise ratio.
SNRAnnotation - Class in annotation.calcs.snr
 
SNRAnnotation(DataAnnotationType) - Constructor for class annotation.calcs.snr.SNRAnnotation
 
SNRAnnotationPanel - Class in annotation.calcs.snr
 
SNRAnnotationPanel(SNRAnnotationType) - Constructor for class annotation.calcs.snr.SNRAnnotationPanel
 
SNRAnnotationType - Class in annotation.calcs.snr
SNR annotation type.
SNRAnnotationType() - Constructor for class annotation.calcs.snr.SNRAnnotationType
 
SnrSqlAddon - Class in annotation.calcs.snr
 
SnrSqlAddon(SNRAnnotationType) - Constructor for class annotation.calcs.snr.SnrSqlAddon
 
sortAcending(double[], int[]) - Static method in class PamUtils.BubbleSort
Bubble sort.
sortAcending(int[], int[]) - Static method in class PamUtils.BubbleSort
Bubble sort.
sortAcending(long[], int[]) - Static method in class PamUtils.BubbleSort
Bubble sort.
sortAngleMeasurement() - Method in class videoRangePanel.externalSensors.AngleListener
 
sortChannels(ArrayList<ClickDetection>, int[]) - Method in class clickDetector.ClickDetectionMatch
Take a list of click detections and sort into channels, based on time windows (which are themselves based on spacing between hydrophones);
sortClassified(ArrayList<ClickDetection>, byte) - Static method in class clickDetector.ClickDetectionMatch
Delete all clicks which are not the same type as the primary click.
sortClicks(ArrayList<ClickDetection>) - Method in class clickDetector.ClickDetectionMatch
Sort clicks depending on classification/ being a part of an event/ echoes etc/ and whether the right channel or not; Anything you want to program.
sortClicksEchoes(ArrayList<ClickDetection>) - Static method in class clickDetector.ClickDetectionMatch
Delete all clicks which are echoes
sortData() - Method in class PamguardMVC.PamDataBlock
Sorts all the data units in the data block in order of time (unless a a data unit class choses to overwrite the compareTo function.
sortEvents(ArrayList<ClickDetection>, PamDetection) - Static method in class clickDetector.ClickDetectionMatch
Delete all clicks which are not the same event as the primary click.
sortFrameTitles() - Method in class PamView.GuiFrameManager
 
sortIMUMeasurement() - Method in class videoRangePanel.externalSensors.IMUListener
 
sortItemsByCode() - Method in class generalDatabase.lookupTables.LookupList
Sort the items by the code value in the look up table (case insensitive)
sortItemsById() - Method in class generalDatabase.lookupTables.LookupList
Sort the items by the database id value
sortItemsByOrder() - Method in class generalDatabase.lookupTables.LookupList
Sort the items by the order value in the look up table
sortItemsByText() - Method in class generalDatabase.lookupTables.LookupList
Sort the items by the text value in the look up table (case insensitive)
sortMapPoints() - Method in class dataMap.OfflineDataMap
Sort all map points into ascending order based on start time.
sortRanges() - Method in class dataMap.OfflineDataMap
Called after de-serailisation of a data map so that the min and max times stored in this object (which is not serialised can be extracted from the list of data which WAS serialised.
SOUNDCARD - Static variable in class Acquisition.AcquisitionCParameters
 
soundCardDialogComponent - Class in soundPlayback
 
soundCardDialogComponent(SoundCardSystem) - Constructor for class soundPlayback.soundCardDialogComponent
 
SoundCardFilePlayback - Class in soundPlayback
 
SoundCardFilePlayback(FilePlayback) - Constructor for class soundPlayback.SoundCardFilePlayback
 
SoundCardParameters - Class in Acquisition
Used by SoundCardSystem
SoundCardParameters() - Constructor for class Acquisition.SoundCardParameters
 
SoundCardPlayback - Class in soundPlayback
 
SoundCardPlayback(SoundCardSystem) - Constructor for class soundPlayback.SoundCardPlayback
 
SoundCardSystem - Class in Acquisition
Everything and everything to do with controlling and reading sound cards.
SoundCardSystem() - Constructor for class Acquisition.SoundCardSystem
 
soundFile - Variable in class Acquisition.AcquisitionCParameters
 
soundFile - Variable in class alarm.actions.sound.PlaySoundParams
 
soundPlayback - package soundPlayback
 
SoundRecorder - package SoundRecorder
 
SoundRecorder.trigger - package SoundRecorder.trigger
 
SoundTrapTime - Class in d3
 
SoundTrapTime() - Constructor for class d3.SoundTrapTime
 
soundType - Variable in class RightWhaleEdgeDetector.RWESound
 
SOURCE_ACOUSTICTRACKING - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_LENGTH - Static variable in class beakedWhaleProtocol.BeakedLogging
 
SOURCE_OTHER - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_OTHERVESSELSIGHTING - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_SHORESIGHTING_OTHER - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_SHORESIGHTING_RETICULE - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_SHORESIGHTING_THEODOLITE - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_SHORESIGHTING_VIDEO - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_UNKNOWN - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
SOURCE_VESSELSIGHTING - Static variable in class beakedWhaleProtocol.BeakedLocationData
 
sourceName - Variable in class likelihoodDetectionModule.AcquisitionSettings
The name of the acquisition source module.
sourceName - Variable in class Spectrogram.SpectrogramParameters
 
sourceNumber - Variable in class likelihoodDetectionModule.AcquisitionSettings
The number assigned to the source module by the pamguard controller.
SourcePanel - Class in PamView
Standard panel for dialogs that shows a list of available data sources and, optionally a list of data channels.
SourcePanel(Window, String, Class, boolean, boolean) - Constructor for class PamView.SourcePanel
Construct a panel with a titles border
SourcePanel(Window, Class, boolean, boolean) - Constructor for class PamView.SourcePanel
Construct a panel without a border
SourcePanelMonitor - Interface in PamView
Interface for objects requiring notifications when channel selections in a GroupedSourcePanel change
sourceSelection() - Method in class envelopeTracer.