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All Classes and Interfaces|All Packages|Constant Field Values|Serialized Form

A

A - Enum constant in enum class AIS.StationType
 
ABORT - Static variable in class whistleClassifier.training.ClassifierTrainingProgress
 
AboutPluginDisplay - Class in PamModel
 
ABOVE_LEFT - Static variable in class Layout.PamAxis
 
ABOVE_LEFT - Static variable in class pamViewFX.fxNodes.pamAxis.PamAxisFX
 
ABOVE_LEVEL - Static variable in class mcc.mccjna.MCCConstants
 
absAngle(PamVector) - Method in class pamMaths.PamVector
Calculates the smallest angle between two vectors (0 invalid input: '<'= angle invalid input: '<' pi/2);
absElements() - Method in class pamMaths.PamVector
Make all elements within the vector positive.
absMillisecondsToSamples(long) - Method in class PamguardMVC.PamProcess
Convert a time in milliseconds to a number of samples.
absolute - Enum constant in enum class tethys.localization.TimeReference
 
absolute(int) - Method in class generalDatabase.pamCursor.NonScrollablePamCursor
 
absolute(int) - Method in class generalDatabase.pamCursor.PamCursor
Go t0 an absolute row number
absolute(int) - Method in class generalDatabase.pamCursor.ScrollablePamCursor
 
ABSOLUTE - Enum constant in enum class classifier.Classifier.ProbabilityType
 
Absorption - Class in propagation
 
Absorption() - Constructor for class propagation.Absorption
 
absSamplesToMilliseconds(long) - Method in class PamguardMVC.blockprocess.PamBlockProcess
Convert am ADC sample number to a millisecond time.
absSamplesToMilliseconds(long) - Method in class PamguardMVC.PamProcess
Convert am ADC sample number to a millisecond time.
AbstractCellEditor - Class in likelihoodDetectionModule
The class AbstractCellEditor serves as the base class for the TreeTable's table cell editor.
AbstractCellEditor() - Constructor for class likelihoodDetectionModule.AbstractCellEditor
 
AbstractControlPanel - Class in targetMotionModule.panels
 
AbstractControlPanel(TargetMotionControl) - Constructor for class targetMotionModule.panels.AbstractControlPanel
 
AbstractFilter - Class in Filters
Abstract implementation of Filter interface to provide common functionality for two of the main function calls for processing arrays of data.
AbstractFilter() - Constructor for class Filters.AbstractFilter
 
AbstractLocalisation - Class in PamDetection
Class for localisation information.
AbstractLocalisation(PamDataUnit, int, int) - Constructor for class PamDetection.AbstractLocalisation
Constructor for a localisation.
AbstractLocalisation(PamDataUnit, int, int, int, PamVector[]) - Constructor for class PamDetection.AbstractLocalisation
Constructor for a localisation.
AbstractLocalisation(PamDataUnit, LocContents, int) - Constructor for class PamDetection.AbstractLocalisation
Constructor for a localisation.
AbstractLocaliser<T extends PamDataUnit> - Class in Localiser.algorithms.timeDelayLocalisers.bearingLoc
Abstract Localiser class.
AbstractLocaliser(PamDataBlock<T>) - Constructor for class Localiser.algorithms.timeDelayLocalisers.bearingLoc.AbstractLocaliser
 
AbstractPamScroller - Class in pamScrollSystem
 
AbstractPamScroller(String, int, int, long, boolean) - Constructor for class pamScrollSystem.AbstractPamScroller
 
AbstractPamScrollerAWT - Class in pamScrollSystem
 
AbstractPamScrollerAWT(String, int, int, long, boolean) - Constructor for class pamScrollSystem.AbstractPamScrollerAWT
 
AbstractPamScrollerFX - Class in pamViewFX.fxNodes.pamScrollers
A scroller UI interfacing with PAMGUARD programmed using JavaFX.
AbstractPamScrollerFX(String, Orientation, int, long, boolean) - Constructor for class pamViewFX.fxNodes.pamScrollers.AbstractPamScrollerFX
 
AbstractScrollManager - Class in pamScrollSystem
 
AbstractScrollManager.SpecialDataBlockInfo - Class in pamScrollSystem
Holds a reference to a data block and some extra information on how that data block should be loaded.
AbstractTargetMotionInformation - Class in targetMotionModule
Deprecated.
AbstractTargetMotionInformation(ArrayList<PamDataUnit>, PamDataBlock) - Constructor for class targetMotionModule.AbstractTargetMotionInformation
Deprecated.
 
AbstractTargetMotionModel - Class in targetMotionModule.algorithms
 
AbstractTargetMotionModel<T extends PamDataUnit> - Class in targetMotionOld.algorithms
Reinstated Target motion add-in as used by the click detector.
AbstractTargetMotionModel() - Constructor for class targetMotionModule.algorithms.AbstractTargetMotionModel
 
AbstractTargetMotionModel() - Constructor for class targetMotionOld.algorithms.AbstractTargetMotionModel
 
AbstractTDZoomable - Class in dataPlots.mouse
 
AbstractTDZoomable() - Constructor for class dataPlots.mouse.AbstractTDZoomable
 
AbstractTimeDelayLocaliser<T extends PamDataUnit> - Class in targetMotionOld
Reinstated Target motion add-in as used by the click detector.
AbstractTimeDelayLocaliser() - Constructor for class targetMotionOld.AbstractTimeDelayLocaliser
 
abstractTip - Static variable in class tethys.swing.export.DescriptionTypePanel
 
AbstractVRGUIAWT - Class in videoRangePanel.vrmethods
 
AbstractVRGUIAWT(AbstractVRMethod) - Constructor for class videoRangePanel.vrmethods.AbstractVRGUIAWT
 
AbstractVRGUIFX - Class in videoRangePanel.vrmethods
Contains more generic nodes for JavaFX implementation of video range GUI.
AbstractVRGUIFX(AbstractVRMethod) - Constructor for class videoRangePanel.vrmethods.AbstractVRGUIFX
 
AbstractVRMethod - Class in videoRangePanel.vrmethods
AbstractVRMethod provides a significant amount of the basic functionality required to determine the range of an animal from an image.
AbstractVRMethod(VRControl) - Constructor for class videoRangePanel.vrmethods.AbstractVRMethod
 
AbstractWekaClassifier - Class in classifier
 
AbstractWekaClassifier() - Constructor for class classifier.AbstractWekaClassifier
 
AbstractWhistleDataBlock<T extends AbstractWhistleDataUnit> - Class in whistlesAndMoans
 
AbstractWhistleDataBlock(Class, String, PamProcess, int) - Constructor for class whistlesAndMoans.AbstractWhistleDataBlock
 
AbstractWhistleDataUnit - Class in whistlesAndMoans
 
AbstractWhistleDataUnit(long, int, long, long) - Constructor for class whistlesAndMoans.AbstractWhistleDataUnit
 
AbstractWhistleDataUnit(DataUnitBaseData) - Constructor for class whistlesAndMoans.AbstractWhistleDataUnit
 
accept(File) - Method in class Acquisition.pamAudio.PamAudioFileFilter
 
accept(File) - Method in class clickDetector.dialogs.ClickAlarmDialog.SoundFilter
 
accept(File) - Method in class Map.MapFileFilter
 
accept(File) - Method in class PamUtils.PamFileFilter
 
accept(File) - Method in class PamUtils.PamWildCardFileFilter
 
accept(File) - Method in class videoRangePanel.pamImage.ImageFileFilter
 
accept(File, String) - Method in class PamUtils.PamWildCardFileFilter
 
accepted - Variable in class likelihoodDetectionModule.LikelihoodDetectionParametersDialog
The accepted state of the dialog (i.e., whether OK has been selected).
AcceptMeasurementDialog - Class in videoRangePanel.layoutAWT
 
AcceptOnExitTableCell<S,T> - Class in pamViewFX.fxNodes.table
A class containing a TableCell implementation that draws a TextField node inside the cell.
AcceptOnExitTableCell() - Constructor for class pamViewFX.fxNodes.table.AcceptOnExitTableCell
Creates a default TextFieldTableCell with a null converter.
AcceptOnExitTableCell(StringConverter<T>) - Constructor for class pamViewFX.fxNodes.table.AcceptOnExitTableCell
Creates a TextFieldTableCell that provides a TextField when put into editing mode that allows editing of the cell content.
acceptOverlapping - Variable in class PamView.paneloverlay.overlaymark.OverlayMarkDataInfo
Accept data units which only partially overlap a data mark.
ACCESSIBLE_95 - Static variable in class PamView.ColorSettings
 
ACCESSIBLE_99 - Static variable in class PamView.ColorSettings
 
ACCESSIBLE_999 - Static variable in class PamView.ColorSettings
 
ackOutOfDate - Variable in class whistleDetector.WhistleParameters
Acknowledge that this unit is out of date.
acosh(double) - Static method in class Filters.ChebyWindow
Calculate acosh function.
AcousticDataBlock<Tunit extends PamDataUnit> - Class in PamguardMVC
Class for all PAMGAURD data based on acoustic types of data, i.e.
AcousticDataBlock(Class, String, PamProcess, int) - Constructor for class PamguardMVC.AcousticDataBlock
 
AcousticDataGramGraphics - Class in pamViewFX.fxNodes.pamScrollers.acousticScroller
Implementation of AcousticScrollerGraphics which uses the existing datagram of a PamDataBlock to show information in the acoustic scroll bar graphics.
AcousticDataGramGraphics(AcousticScrollerFX, PamDataBlock<PamDataUnit>) - Constructor for class pamViewFX.fxNodes.pamScrollers.acousticScroller.AcousticDataGramGraphics
 
AcousticDataGramGraphics.DataGramStore - Class in pamViewFX.fxNodes.pamScrollers.acousticScroller
The datagram store.
AcousticDataUnit - Interface in PamguardMVC
Used as a flag to indicate that the data unit implementing this interface holds some type of acoustic data.
AcousticScrollerFX - Class in pamViewFX.fxNodes.pamScrollers.acousticScroller
The acoustic scroll pane shows a summary of all the acoustic data available in a particular scroll period.
AcousticScrollerFX(String, Orientation, int, long, boolean) - Constructor for class pamViewFX.fxNodes.pamScrollers.acousticScroller.AcousticScrollerFX
Constructor for the acoustic scroller.
AcousticScrollerGraphics - Interface in pamViewFX.fxNodes.pamScrollers.acousticScroller
Handles the graphics for an acopustic scroller.
AcousticScrollerProjector() - Constructor for class pamViewFX.fxNodes.pamScrollers.acousticScroller.FFTScrollBarGraphics.AcousticScrollerProjector
 
AcousticSQLLogging - Class in PamDetection
 
AcquireNmeaData - Class in NMEA
 
Acquisition - package Acquisition
 
Acquisition.filedate - package Acquisition.filedate
 
Acquisition.filetypes - package Acquisition.filetypes
 
Acquisition.gpstiming - package Acquisition.gpstiming
 
Acquisition.layoutFX - package Acquisition.layoutFX
 
Acquisition.offlineFuncs - package Acquisition.offlineFuncs
 
Acquisition.pamAudio - package Acquisition.pamAudio
 
Acquisition.rona - package Acquisition.rona
 
Acquisition.sud - package Acquisition.sud
 
AcquisitionControl - Class in Acquisition
Main data acquisition control to get audio data from sound cards, NI cards (via UDP), files, directories of files, etc.
AcquisitionControl(String) - Constructor for class Acquisition.AcquisitionControl
Main control unit for audio data acquisition.
AcquisitionControl(String, boolean) - Constructor for class Acquisition.AcquisitionControl
 
AcquisitionControl(String, String) - Constructor for class Acquisition.AcquisitionControl
Overloaded constructor - used by the STAcquisitionControl class as a way to call the PamController.PamControlledUnit constructor without all of the AcquisitionControl code above
AcquisitionCParameters - Class in Acquisition
Very simplified version of the Acquisition parameters to be passed over the JNI to the C backend.
AcquisitionCParameters() - Constructor for class Acquisition.AcquisitionCParameters
 
AcquisitionDialog - Class in Acquisition
Main dialog for acquisition control.
AcquisitionLogging - Class in Acquisition
Very simple concrete implementation of SQLLogging to log the starts and stops of PAMGUARD in the database.
AcquisitionLogging(PamDataBlock, AcquisitionControl) - Constructor for class Acquisition.AcquisitionLogging
 
AcquisitionPaneFX - Class in Acquisition.layoutFX
Settings pane for the sound acquisition parameters.
AcquisitionPaneFX(AcquisitionControl) - Constructor for class Acquisition.layoutFX.AcquisitionPaneFX
 
acquisitionParameters - Variable in class Acquisition.AcquisitionControl
 
AcquisitionParameters - Class in Acquisition
 
AcquisitionParameters() - Constructor for class Acquisition.AcquisitionParameters
 
AcquisitionProcess - Class in Acquisition
Data acquisition process for all types of input device.
AcquisitionSettings - Class in likelihoodDetectionModule
The AcquisitionSettings class provides a module-local storage object for holding on to the properties of the audio data source (acquisition module) upon which the module is depending.
AcquisitionSettings() - Constructor for class likelihoodDetectionModule.AcquisitionSettings
Instantiates a new acquisition settings.
acquisitionStopped() - Method in class Acquisition.AcquisitionProcess
 
acquisitionStopped() - Method in class soundtrap.STAcquisitionProcess
 
AcRelNcyc - Variable in class cpod.FPODReader.FPODHeader
 
AcRelSlotLength - Variable in class cpod.FPODReader.FPODHeader
 
AcRelSlotSpacing - Variable in class cpod.FPODReader.FPODHeader
 
ActionDialog - Class in backupmanager.swing
 
ActionDialog(Window, String, boolean) - Constructor for class backupmanager.swing.ActionDialog
 
ActionDialogPanel - Class in backupmanager.swing
 
ActionDialogPanel(BackupAction) - Constructor for class backupmanager.swing.ActionDialogPanel
 
ActionEventFX(ActionListener[]) - Constructor for class pamViewFX.fxNodes.utilsFX.MenuItemInfo.ActionEventFX
 
ActionMaker - Class in backupmanager.action
 
ActionMaker(String, Class<?>) - Constructor for class backupmanager.action.ActionMaker
 
actionPerformed(ActionEvent) - Method in class Acquisition.FileInputSystem
 
actionPerformed(ActionEvent) - Method in class AIS.AISDisplayDialog
 
actionPerformed(ActionEvent) - Method in class Array.ArrayDialog
 
actionPerformed(ActionEvent) - Method in class Array.ChannelPanel
 
actionPerformed(ActionEvent) - Method in class Array.HydrophoneDialogPanel
 
actionPerformed(ActionEvent) - Method in class clickDetector.ClickBTDisplay.FollowBoxListener
 
actionPerformed(ActionEvent) - Method in class clickDetector.ClickClassifiers.basic.ClickTypeDialog
 
actionPerformed(ActionEvent) - Method in class clickDetector.ClickClassifiers.ClickTypesDialog
 
actionPerformed(ActionEvent) - Method in class clickDetector.ClickSidePanel.SidePanel
Cycle through all available alarms, playing each one
actionPerformed(ActionEvent) - Method in class clickDetector.ClickTabPanelControl.ArrangeWindows
 
actionPerformed(ActionEvent) - Method in class clickDetector.ClickTabPanelControl.OverlayOptions
 
actionPerformed(ActionEvent) - Method in class clickDetector.ClickToolBar
Deprecated.
 
actionPerformed(ActionEvent) - Method in class clickDetector.dialogs.ClickAlarmDialog
ActionListener events for the GUI components
actionPerformed(ActionEvent) - Method in class clickDetector.dialogs.ClickDisplayDialog
 
actionPerformed(ActionEvent) - Method in class clickDetector.dialogs.ClickStorageOptionsDialog
 
actionPerformed(ActionEvent) - Method in class clickDetector.IDI_DisplayDialog
Starts the open file dialog
actionPerformed(ActionEvent) - Method in class dataPlots.HidingControlPanel.RemoveAGraph
 
actionPerformed(ActionEvent) - Method in class difar.display.DifarClipDecorations.EditSpeciesList
 
actionPerformed(ActionEvent) - Method in class fftManager.FFTPluginParamsDialog
 
actionPerformed(ActionEvent) - Method in class Filters.FilterDialogPanel
 
actionPerformed(ActionEvent) - Method in class generalDatabase.dataExport.ValueFilterDialog
 
actionPerformed(ActionEvent) - Method in class GPS.ShipDimensionsFields
 
actionPerformed(ActionEvent) - Method in class GPS.UpdateClockDialog
 
actionPerformed(ActionEvent) - Method in class ishmaelComms.ProcessIshmaelData
 
actionPerformed(ActionEvent) - Method in class IshmaelDetector.MatchFiltParamsDialog
 
actionPerformed(ActionEvent) - Method in class IshmaelLocator.IshLocParamsDialog
 
actionPerformed(ActionEvent) - Method in class JSSHTerminal.MultiTerminal
 
actionPerformed(ActionEvent) - Method in class likelihoodDetectionModule.NewBandNameDialog
 
actionPerformed(ActionEvent) - Method in class likelihoodDetectionModule.TargetConfigurationNameDialog
 
actionPerformed(ActionEvent) - Method in class NMEA.AcquireNmeaData
 
actionPerformed(ActionEvent) - Method in class NMEA.NMEAParametersDialog
 
actionPerformed(ActionEvent) - Method in class PamController.ModuleOrderDialog
 
actionPerformed(ActionEvent) - Method in class PamUtils.LatLongDialog
 
actionPerformed(ActionEvent) - Method in class PamUtils.LatLongDialogStrip
 
actionPerformed(ActionEvent) - Method in class PamView.dialog.SourcePanel
action listener to update channel list when a a different source is selected
actionPerformed(ActionEvent) - Method in class PamView.ObserverListPopup
 
actionPerformed(ActionEvent) - Method in class PamView.PamSymbolDialog
 
actionPerformed(ActionEvent) - Method in class PamView.PamWaitAnimation
 
actionPerformed(ActionEvent) - Method in class PamView.paneloverlay.OverlayCheckboxMenuSelect
 
actionPerformed(ActionEvent) - Method in class PamView.symbol.modifier.swing.ChoiceTreeNode
 
actionPerformed(ActionEvent) - Method in class rawDeepLearningClassifier.dataPlotFX.DLSymbolOptionPanel
 
actionPerformed(ActionEvent) - Method in class rocca.RoccaClickEventList
 
actionPerformed(ActionEvent) - Method in class rocca.RoccaClickTypeDialog
 
actionPerformed(ActionEvent) - Method in class rocca.RoccaParametersDialog
 
actionPerformed(ActionEvent) - Method in class Spectrogram.SpectrogramParamsDialog
 
actionPerformed(ActionEvent) - Method in class targetMotionModule.panels.EventControlPanel.PopMenuLocalise
 
actionPerformed(ActionEvent) - Method in class pamViewFX.fxNodes.utilityPanes.LatLongPane
 
actionRecorderTrigger(RecorderTrigger, PamDataUnit, long) - Static method in class SoundRecorder.RecorderControl
static version of actionRecordTrigger can be called from anywhere in PamGuard.
ActionSettings - Class in backupmanager.settings
Base class for action settings.
ActionSettings(Class) - Constructor for class backupmanager.settings.ActionSettings
constructor for the base ActinSettings.
ActionSettings(String) - Constructor for class backupmanager.settings.ActionSettings
classname must be the full name of the class that uses these settings.
activate - Variable in class PamUtils.time.ntp.NTPTimeParameters
 
Active - Enum constant in enum class likelihoodDetectionModule.TargetConfiguration.State
The configuration is Active.
actOnAlarm(AlarmDataUnit) - Method in class alarm.actions.AlarmAction
Act on the alarm - called every time the data unit is updated.
actOnAlarm(AlarmDataUnit) - Method in class alarm.actions.email.SendEmailAction
 
actOnAlarm(AlarmDataUnit) - Method in class alarm.actions.serial.AlarmSerialAction
 
actOnAlarm(AlarmDataUnit) - Method in class alarm.actions.sound.PlaySound
 
actOnAlarm(AlarmDataUnit) - Method in class alarm.actions.udp.AlarmUDPAction
 
adaptiveThreshold - Variable in class IshmaelDetector.EnergySumParams
Use an averaging window adaptive noise floor.
ADC_Channel - Enum constant in enum class loggerForms.UDColName
 
ADC_CONVERT - Static variable in class mcc.mccjna.MCCConstants
 
ADC_Gain - Enum constant in enum class loggerForms.UDColName
 
ADC_GATE - Static variable in class mcc.mccjna.MCCConstants
 
ADC_SCAN_STOP - Static variable in class mcc.mccjna.MCCConstants
 
ADC_SCANCLK - Static variable in class mcc.mccjna.MCCConstants
 
ADC_SSH - Static variable in class mcc.mccjna.MCCConstants
 
ADC_START_TRIG - Static variable in class mcc.mccjna.MCCConstants
 
ADC_STARTSCAN - Static variable in class mcc.mccjna.MCCConstants
 
ADC_STOP_TRIG - Static variable in class mcc.mccjna.MCCConstants
 
ADC_TB_SRC - Static variable in class mcc.mccjna.MCCConstants
 
ADCCLOCK - Static variable in class mcc.mccjna.MCCConstants
 
ADCCLOCKTRIG - Static variable in class mcc.mccjna.MCCConstants
 
add(long, long) - Method in class tethys.deployment.RecordingList
Add a recording period to the list.
add(E) - Method in class PamguardMVC.PamDataUnitIterator
 
add(GpsData) - Method in class Array.streamerOrigin.GPSOriginIterator
 
add(GpsData) - Method in class Array.streamerOrigin.StreamerDataIterator
 
add(Component) - Method in class PamView.PamStatusBar
 
add(Component) - Method in class PamView.panel.PamAlignmentPanel
 
add(Component, int) - Method in class PamView.panel.PamAlignmentPanel
 
add(Component, Object) - Method in class PamView.panel.PamAlignmentPanel
 
add(Component, Object, int) - Method in class PamView.panel.PamAlignmentPanel
 
add(String) - Method in class loggerForms.UDFError
 
add(String) - Method in class loggerForms.UDFErrors
 
add(String, Component) - Method in class PamView.panel.PamAlignmentPanel
 
add(String, Component) - Method in class PamView.panel.PamTabbedPane
 
add(Node, int, int) - Method in class pamViewFX.fxNodes.PamGridPane
 
add(Node, int, int, int, int) - Method in class pamViewFX.fxNodes.PamGridPane
 
add(JComponent) - Method in class PamView.HidingSidePanel
Add a component to the side panel
add(LandmarkData) - Method in class landMarks.LandmarkDatas
 
add(ItemInformation, String) - Method in class loggerForms.UDFError
 
add(ItemInformation, String) - Method in class loggerForms.UDFErrors
 
add(PamDataUnit) - Method in class PamguardMVC.blockprocess.PamBlockDataList
 
add(PamVector) - Method in class pamMaths.PamVector
Add another vector to this vector and return the result in a new Vector
add(PamVector...) - Static method in class pamMaths.PamVector
Add any number of vectors together.
add(PamKeyItem) - Method in class PamView.panel.KeyPanel
 
add(HidingTab) - Method in class pamViewFX.fxNodes.hidingPane.HidingTabPane.TabList
 
add(SequenceSummary) - Method in class qa.analyser.SequenceSummary
Add the content of another summary into this summary and return a new object containing the data from both.
add(RecordingPeriod) - Method in class tethys.deployment.RecordingList
Add a recording period to the list.
add(Tunit) - Method in class PamguardMVC.ReverseChannelIterator
 
ADD_CONTROLLEDUNIT - Static variable in interface PamController.PamControllerInterface
Automatically sent when a PamControlledUnit is added
ADD_DATABLOCK - Static variable in interface PamController.PamControllerInterface
Automatically sent when a PamDataBlock is added
ADD_PROCESS - Static variable in interface PamController.PamControllerInterface
Automatically sent when a PamProcess is added
ADDA1 - Static variable in class mcc.mccjna.MCCConstants
 
ADDA2 - Static variable in class mcc.mccjna.MCCConstants
 
addAcousticScrollGraphics(AcousticScrollerGraphics) - Method in class pamViewFX.fxNodes.pamScrollers.acousticScroller.AcousticScrollerFX
Add graphics to the scroll bar.
addAction(BackupAction) - Method in class backupmanager.stream.BackupStream
Add an action
addActionListener(ActionListener) - Method in class PamView.ColourComboBox
 
addActionListener(ActionListener) - Method in class tethys.swing.FancyClientButton
 
addActionListenr(ActionListener) - Method in class Array.sensors.swing.SensorSourceComponent
Add an action listener to the drop down list.
addActionSettings(ActionSettings) - Method in class backupmanager.settings.BackupSettings
Add some action settings
addAddOn(SQLLoggingAddon) - Method in class annotationMark.MarkSQLLogging
 
addAddOn(SQLLoggingAddon) - Method in class generalDatabase.SQLLogging
Add an SQL Logging addon - something which adds some standard columns to what it probably a non standard table, e.g.
addAffectedDataBlock(PamDataBlock) - Method in class offlineProcessing.OfflineTask
Add an affected data block.
addAISData(AISDataUnit) - Method in class AIS.AISDataBlock
aisDataUnit is always a new unit extracted from a group of AIS strings, but with a single lot of data.
addAlgorithmName(String) - Method in class bearinglocaliser.BearingLocaliserParams
 
addAlgorithmNames(String) - Method in class beamformer.BeamFormerParams
 
addAllTabs(List<PamGuiTabFX>) - Method in class pamViewFX.PamGuiFX
Add tabs to the tab pane.
addAngleData(double) - Method in class angleVetoes.AngleVetoes
Add data to angle stats histogram for display
addAnnotation(DataAnnotationType, PamDataUnit) - Method in class annotation.handler.AnnotationHandler
Add an annotation to a detection group.
addAnnotation(OverlayMarker, OverlayMark, DataAnnotationType, DetectionGroupDataUnit) - Method in class detectiongrouplocaliser.DetectionGroupProcess
Add an annotation to a detection group.
addAnnotationModifiers(PamSymbolChooser) - Method in class PamView.symbol.PamSymbolManager
Add symbol modifiers from annotations.
addAnnotations(DataAnnotationType, PamDataUnit...) - Method in class annotation.handler.AnnotationHandler
 
addAnnotations(Struct, int, PamDataUnit) - Method in class export.MLExport.MLAnnotationsManager
Add annotations to a MATLAB structure.
addAnnotationSqlAddons(SQLLogging) - Method in class annotation.handler.AnnotationHandler
Add all the SQLLogging addons to the database table.
addAnnotationType(DataAnnotationType) - Method in class annotation.handler.AnnotationHandler
Add an annotation type to the list of available types for this datablock.
addAnnotationType(DataAnnotationType) - Method in class annotationMark.MarkModule
This must be called from the concrete super class constructor with a valid SoloannotationType to set up the module.
addAnnotationType(DataAnnotationType<?>) - Method in class annotation.AnnotationList
Add a data annotation type to the list
addAnnotationType(DataAnnotationType<?>) - Static method in class annotation.CentralAnnotationsList
convenience wrapper round underlying singleton functions.
addArray(PamArray) - Method in class Array.ArrayDialog
 
addArray(PamArray) - Method in class Array.ArrayManager
 
addASighting(boolean) - Method in class rocca.RoccaSidePanel.SidePanel
Ask the user for a new sighting number, and add it to the side panel
addASighting(String) - Method in class rocca.RoccaSidePanel.SidePanel
Add the new sighting number to the sidepanel
addAvailableTasks(OfflineTaskGroup, PamDataBlock) - Method in class offlineProcessing.OfflineTaskManager
Add all available tasks from the system which use the given datablock as primary input.
addBackground(double[]) - Method in class gpl.whiten.Base3xWhitener
 
addBackground(double[]) - Method in class gpl.whiten.SimpleWhitener
 
addBackground(double[]) - Method in interface gpl.whiten.TimeWhitener
Add data to background data store.
addBlockData(PamBlockDataList) - Method in class gpl.GPLProcess
 
addBlockData(PamBlockDataList) - Method in class PamguardMVC.blockprocess.PamBlockProcess
Called in sequence for data in a block so it can make background measurements
addBranchNewSocket(ConnectorNode) - Method in class pamViewFX.fxNodes.connectionPane.ConnectionLine
Add a new socket to the line.
addBTMenuItems(Container, OverlayMark, ClickBTDisplay, boolean, ClickDetection) - Method in class clickDetector.offlineFuncs.ClicksOffline
Add menu items associated with right mouse actions on bearing time display
addBTMenuItems(Container, OverlayMark, List<PamDataUnit>, boolean, PamDataUnit) - Method in class clickDetector.offlineFuncs.ClicksOffline
 
addButton() - Method in class clickDetector.ClickClassifiers.basic.BasicIdentifierPanel
 
addButton() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierPanel
 
addButton() - Method in class clickDetector.ClickClassifiers.UserTypesPanel
 
addButtonInsets - Variable in class pamViewFX.fxNodes.PamTabPaneSkin
How many pixels the tab button 'floats' in the header area.
addCalibrationData(VRCalibrationData) - Method in class videoRangePanel.VRParameters
 
AddCalibrationMethod - Class in videoRangePanel.vrmethods.calibration
 
AddCalibrationMethod(VRControl) - Constructor for class videoRangePanel.vrmethods.calibration.AddCalibrationMethod
 
addCard(PamWizardCard) - Method in class PamView.wizard.PamWizard
 
addCellEditorListener(CellEditorListener) - Method in class likelihoodDetectionModule.AbstractCellEditor
 
addChangeListener(LookupChangeListener) - Method in class generalDatabase.lookupTables.LookupComponent
Add a change listener to receive notifications whenever the lookup selection changes.
addChangeListener(ChangeListener) - Method in class soundPlayback.fx.PlaySliderPane
Add a change listener.
addChangeListener(ChangeListener<? super T>) - Method in class pamViewFX.fxNodes.utilsFX.DualControlField
Add a change listener to both spinners.
addChangeListener(ChangeListener) - Method in class soundPlayback.swing.PlaySliderComponent
Add a change listener.
addChangeListener(HidingDialogChangeListener) - Method in class PamView.hidingpanel.HidingDialogComponent
 
addChangeObserver(PlaybackChangeObserver) - Method in class soundPlayback.PlaybackSystem
 
addCharListener(PJSerialLineListener) - Method in class serialComms.jserialcomm.PJSerialComm
 
addChi2Penalties(double, TrackBitSet<?>, int, int, int) - Method in interface clickTrainDetector.clickTrainAlgorithms.mht.electricalNoiseFilter.ElectricalNoiseFilter
Add electric noise penalty to the chi2 value.
addChi2Penalties(double, TrackBitSet<?>, int, int, int) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.electricalNoiseFilter.SimpleElectricalNoiseFilter
 
addChoice(ReprocessStoreChoice) - Method in class PamController.fileprocessing.StoreChoiceSummary
Add a reasonable choice to what the user can select to do.
addChunkData(WavChunkData) - Method in class Acquisition.WavHeader
 
addClassifier(String, CTClassifierParams) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtMAT.MHTAlgorithmMAT
Add a classifier to the algorithm
addClassifier(String, CTClassifierParams) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtMAT.MHTClassifierMAT
Add a classifier based on an input settings class and type string
addClipGenSettings(ClipGenSetting) - Method in class clipgenerator.ClipSettings
Add a new clip gen setting to the list.
addColorTransparancy(Color, double) - Static method in class pamViewFX.fxNodes.utilsFX.PamUtilsFX
Add transparancy to a JavaFX colour
addColumn(Connection, SQLTypes, String, EmptyTableDefinition, PamTableItem) - Static method in class generalDatabase.TableUtilities
 
addCommandLineTask(String) - Method in class offlineProcessing.OfflineTaskManager
Add a task listed in the command line when PAMGuard was started.
addCompatibleUnit(Class<? extends PamDataUnit>) - Method in class userDisplayFX.UserDisplayControlFX
 
addComponent(JPanel, Component, GridBagConstraints) - Static method in class Map.GpsTextDisplay
 
addComponent(JPanel, Component, GridBagConstraints) - Static method in class Map.MouseMeasureDisplay
 
addComponent(JPanel, Component, GridBagConstraints) - Static method in class PamView.dialog.GroupedSourcePanel
 
addComponent(JPanel, Component, GridBagConstraints) - Static method in class PamView.dialog.PamDialog
add to a panel which must use GridBagLayout
addComponent(JPanel, Component, GridBagConstraints) - Static method in class PamView.panel.PamBorderPanel
 
addComponent(JPanel, Component, GridBagConstraints) - Static method in class PamView.panel.PamPanel
 
addConnectionListener(ConnectionListener) - Method in interface pamViewFX.fxNodes.connectionPane.ConnectionNode
Add a connection listener.
addConnectionListener(ConnectionListener) - Method in class pamViewFX.fxNodes.connectionPane.StandardConnectionNode
Adds a connectionListener which is triggered by any CollisionShape;
addConnectorNodeListener(ConnectorNodeListener) - Method in interface pamViewFX.fxNodes.connectionPane.ConnectionNode
Add a connector node listener.
addConnectorNodeListener(ConnectorNodeListener) - Method in class pamViewFX.fxNodes.connectionPane.StandardConnectionNode
 
addConstantOverlay(MarkOverlayDraw) - Method in class Map.MapPanel
 
addContour(double[], double[]) - Method in class whistleClassifier.training.TrainingDataSet
 
addContour(double[], double[]) - Method in class whistleClassifier.TrainingDataSet
 
addContour(WhistleContour) - Method in class whistleClassifier.training.TrainingDataSet
 
addContourPoint(int, int, double, double) - Method in class gpl.contour.GPLContour
Add a contour point
addContourPoint(GPLContourPoint) - Method in class gpl.contour.GPLContour
Add a contour point
addControl(JComponent) - Method in class pamScrollSystem.PamScroller
Add an additional control to the control panel which will sit to the right of or just below the wee buttons used for scroll bar navigation.
addControlledUnit(PamControlledUnit) - Method in class PamController.PamConfiguration
Add a PamControlledUnit to the main list.
addControlledUnit(PamControlledUnit) - Method in class PamController.PamController
 
addControlledUnit(PamControlledUnit) - Method in interface PamController.PamControllerInterface
Adds a PamControlledUnit to the controller.
addControlledUnit(PamControlledUnit) - Method in class PamView.GuiFrameManager
 
addControlledUnit(PamControlledUnit) - Method in class PamView.NullGuiController
 
addControlledUnit(PamControlledUnit) - Method in class PamView.PamGui
 
addControlledUnit(PamControlledUnit) - Method in class PamView.PamObjectViewer
 
addControlledUnit(PamControlledUnit) - Method in interface PamView.PamViewInterface
Called whenever a pamcontrolled unit is added ot the model.
addControlledUnit(PamControlledUnit) - Method in class pamViewFX.PamGuiFX
 
addControlledUnit(PamControlledUnit) - Method in class pamViewFX.PamGuiManagerFX
Add a controlled unit to the scene.
addCoordinate(PamCoordinate) - Method in class PamView.paneloverlay.overlaymark.OverlayMark
 
addCount(double, double, int) - Method in class alarm.AlarmCounter
Add a count to the total.
addCount(double, double, int) - Method in class alarm.AlarmDecibelCounter
 
addCount(double, double, int) - Method in class clickDetector.alarm.ClickAlarmCounter
 
addCrossCorError(ArrayList<ArrayList<Double>>, double, float) - Static method in class Localiser.algorithms.genericLocaliser.MCMC.old.MCMCLocaliser
Deprecated.
Adds the cross correlation error to the time delay errors array.
addCtClassification(CTClassification) - Method in class clickTrainDetector.CTDataUnit
Adds a classification for the click train.
addCtrlKeyListener(char, ActionListener) - Method in class PamView.CtrlKeyManager
 
addData(double) - Method in class difar.calibration.CalibrationHistogram
Add new data to the histogram
addData(double) - Method in class gpl.whiten.InfiniteSort
Add data to the sorted list.
addData(double) - Method in class gpl.whiten.InfiniteSortWithMean2
 
addData(double) - Method in class pamMaths.PamHistogram
Add a single point of data to the histogram but don't notify observers
addData(double) - Method in class pamMaths.PamLogHistogram
 
addData(double[]) - Method in class gpl.whiten.InfiniteSortGroup
Add a row of data to an array of individual InfiniteSorts.
addData(double[]) - Method in class gpl.whiten.MovingMatrix
Add a new row of data to the matrix.
addData(double[]) - Method in class gpl.whiten.WhitenMatrix
Add data to the whiteners sort group.
addData(double, boolean) - Method in class pamMaths.PamHistogram
Add a single unit value to the histogram and optionally notify all observers
addData(double, boolean) - Method in class pamMaths.PamLogHistogram
 
addData(double, double) - Method in class pamMaths.PamHistogram
Add weighted data to the histogram
addData(double, double) - Method in class pamMaths.PamLogHistogram
 
addData(int, double) - Method in class noiseBandMonitor.BandPerformance
 
addData(long, double[][]) - Method in class SoundRecorder.PamAudioFileStorage
 
addData(long, double[][]) - Method in interface SoundRecorder.RecorderStorage
Adds data to the store.
addData(long, double[][]) - Method in class SoundRecorder.WavFileStorage
 
addData(DifarDataUnit) - Method in class difar.trackedGroups.TrackedGroupDataUnit
Add a new bearing to this group.
addData(FFTDataUnit) - Method in class fftManager.fftorganiser.FFTDataList
Add an FFTDataUnit to the list.
addData(PamDataUnit) - Method in class pamViewFX.fxNodes.pamScrollers.acousticScroller.AcousticDataGramGraphics.DataGramStore
Add data to the datagram.
addData(PamObservable, PamDataUnit) - Method in class Array.ArrayManager
 
addData(PamObservable, PamDataUnit) - Method in class clickDetector.ClickBTDisplay
 
addData(PamObservable, PamDataUnit) - Method in class clickDetector.ClickSpectrum
 
addData(PamObservable, PamDataUnit) - Method in class clickDetector.ClickTrigger
 
addData(PamObservable, PamDataUnit) - Method in class clickDetector.ClickWaveform
 
addData(PamObservable, PamDataUnit) - Method in class clickDetector.IDI_Display
On new data, add ICI variable to current histogram
addData(PamObservable, PamDataUnit) - Method in class clipgenerator.ClipProcess.ClipBlockProcess
 
addData(PamObservable, PamDataUnit) - Method in class depthReadout.DepthSidePanel
 
addData(PamObservable, PamDataUnit) - Method in class eventCounter.DataCounter
 
addData(PamObservable, PamDataUnit) - Method in class fftManager.FFTPluginPanelProvider.FFTPluginPanel
 
addData(PamObservable, PamDataUnit) - Method in class GPS.UpdateClockDialog
 
addData(PamObservable, PamDataUnit) - Method in class IshmaelDetector.IshDetSave
 
addData(PamObservable, PamDataUnit) - Method in class levelMeter.LevelMeterSidePanel
 
addData(PamObservable, PamDataUnit) - Method in class loggerForms.FormsAlertSidePanel
 
addData(PamObservable, PamDataUnit) - Method in class Map.MapPanel
 
addData(PamObservable, PamDataUnit) - Method in class Map.SimpleMap
 
addData(PamObservable, PamDataUnit) - Method in class PamController.masterReference.GPSDataSystem
 
addData(PamObservable, PamDataUnit) - Method in interface PamguardMVC.PamObserver
Informs the PamObserver that new data have been added to the Observable class
addData(PamObservable, PamDataUnit) - Method in class PamguardMVC.PamObserverAdapter
 
addData(PamObservable, PamDataUnit) - Method in class PamguardMVC.PamProcess
 
addData(PamObservable, PamDataUnit) - Method in class PamguardMVC.RawDataDisplay.RawDisplayPanel
 
addData(PamObservable, PamDataUnit) - Method in class PamguardMVC.ThreadedObserver
 
addData(PamObservable, PamDataUnit) - Method in class radardisplay.RadarDisplay
 
addData(PamObservable, PamDataUnit) - Method in class seismicVeto.VetoPluginPanelProvider.VetoPluginPanel
new data have arrived - work out what channel it's from and plot it.
addData(PamObservable, PamDataUnit) - Method in class Spectrogram.SpectrogramDisplay
 
addData(PamObservable, PamDataUnit) - Method in class whistleClassifier.ClassifierHistoryWindow
 
addData(Tunit) - Method in class PamguardMVC.background.BackgroundManager
Add a background data unit (calls through the addPamData in the underlying datablock).
ADDDATA - Static variable in class PamguardMVC.ObservedObject
 
addDataAnnotation(DataAnnotation) - Method in class PamguardMVC.PamDataUnit
Adds a data annotation to the data unit.
addDataAnnotation(DataAnnotation) - Method in class rawDeepLearningClassifier.dlClassification.DLDetection
 
addDataAnnotationType(DataAnnotationType) - Method in class PamguardMVC.PamDataBlock
Keep for backwards compatibility
addDataBlock(PamDataBlock) - Method in class dataPlotsFX.scroller.TDAcousticScroller
 
addDataBlock(PamDataBlock) - Method in class pamScrollSystem.AbstractPamScroller
Add a datablock to the list for this scroller.
addDataBlock(PamDataBlock, TDGraphFX) - Method in class dataPlotsFX.layout.TDDisplayFX
Add a data block to the display.
addDataBlockGraphics(PamDataBlock) - Method in class dataPlotsFX.scroller.TDAcousticScroller
 
addDataDumpled(long) - Method in class soundPlayback.PlayDeviceState
 
addDataFilter(DataFilter) - Method in class generalDatabase.dataExport.DataExportDialog
 
addDatagramData(PamDataUnit, float[]) - Method in class clickDetector.ClickDatagramProvider
 
addDatagramData(PamDataUnit, float[]) - Method in class cpod.CPODDataGramProvider
 
addDatagramData(PamDataUnit, float[]) - Method in interface dataGram.DatagramProvider
Add datagram data to the dataGram line.
addDatagramData(PamDataUnit, float[]) - Method in class dbht.offline.DbHtDatagramProvider
 
addDatagramData(PamDataUnit, float[]) - Method in class gpl.io.GPLDatagramProvider
 
addDatagramData(PamDataUnit, float[]) - Method in class ltsa.LtsaDatagramProvider
 
addDatagramData(PamDataUnit, float[]) - Method in class noiseBandMonitor.NoiseBandDatagramProvider
 
addDatagramData(PamDataUnit, float[]) - Method in class noiseOneBand.offline.OneBandDatagramProvider
 
addDatagramData(PamDataUnit, float[]) - Method in class rawDeepLearningClassifier.logging.DLDataUnitDatagram
 
addDatagramData(PamDataUnit, float[]) - Method in class rawDeepLearningClassifier.logging.DLDetectionDatagram
 
addDatagramData(PamDataUnit, float[]) - Method in class RightWhaleEdgeDetector.RWEDatagramProvider
 
addDatagramData(PamDataUnit, float[]) - Method in class videoRangePanel.importTideData.TideDatagramProvider
 
addDatagramData(PamDataUnit, float[]) - Method in class whistlesAndMoans.WMDatagramProvider
 
addDataItem(TDDataInfo) - Method in class dataPlots.layout.TDGraph
Add a data item to be plotted on this display
addDataItem(TDDataProvider) - Method in class dataPlots.layout.TDGraph
 
addDataItem(TDDataInfoFX) - Method in class dataPlotsFX.layout.TDGraphFX
Add a data item to be plotted on this display.
addDataItem(TDDataProviderFX) - Method in class dataPlotsFX.layout.TDGraphFX
Add a data item to the graph.
addDataLine(ComplexArray, int) - Method in class detectionPlotFX.plots.WignerData
Add a date line.
addDataListener(SerialPortDataListener) - Method in class serialComms.jserialcomm.PJSerialComm
Call through to underlying serial port to add a data listener.
addDataListInfo(DataListInfo) - Method in class dataPlots.layout.GraphParameters
 
addDataListInfo(DataListInfo) - Method in class dataPlotsFX.TDGraphParametersFX
 
addDataMapObserver(DataMapObserver) - Method in class dataMap.OfflineDataMap
Add a data map observer to get notificatoins when data are updated.
addDataModelTab() - Method in class pamViewFX.PamGuiFX
Add a tab for the data model.
addDataPlayed(long) - Method in class soundPlayback.PlayDeviceState
 
addDataPoint(DatagramDataPoint) - Method in class dataGram.Datagram
Add a data point to a datagram
addDataPoint(TmapPoint) - Method in class dataMap.OfflineDataMap
Add a new map point into the list.
addDataSeries(DataSeries) - Method in class pamViewFX.fxNodes.pamAxis.PlotPaneFX
Add data to the plot
addDataSet(TrainingDataSet) - Method in class whistleClassifier.training.TrainingDataGroup
 
addDataSet(TrainingDataSet) - Method in class whistleClassifier.TrainingDataGroup
 
addDataToDataBlock(AngleDataUnit) - Method in class IMU.IMUControl
 
addDataToDataBlock(AngleDataUnit) - Method in class IMU.IMUImportMananger
 
addDataUnit(int, PamDataUnit) - Method in class group3dlocaliser.grouper.DetectionGroup
 
addDataUnit(int, PamDataUnit) - Method in class group3dlocaliser.grouper.FirstGrouping
 
addDataUnit(PamDataBlock, PamDataUnit, int) - Method in class PamguardMVC.LastDataUnitStore
Add a new unit to the store, returning the previous one if it existed.
addDataUnit(PamDataUnit) - Method in class crossedbearinglocaliser.CBDetectionMatcher.CBMatchGroup
 
addDataUnit(PamDataUnit) - Method in class PamDetection.TDArrayList
 
addDataUnit(PamDataUnit) - Method in class tethys.detection.BinnedGranularityHandler
 
addDataUnit(PamDataUnit) - Method in class tethys.detection.CallGranularityHandler
 
addDataUnit(PamDataUnit) - Method in class tethys.detection.EncounterGranularityHandler
 
addDataUnit(PamDataUnit) - Method in class tethys.detection.GranularityHandler
Put a data unit into a Detection object.
addDataUnit(PamDataUnit) - Method in class tethys.detection.GroupedGranularityHandler
 
addDataUnits(DataLineInfo) - Method in class dataPlots.data.TDDataInfo
Add a type of data unit to the list.
addDeadPoint(double[], FFTDataUnit) - Method in class gpl.DetectedPeak
Add a point that was below threshold.
addDefaultPlug() - Method in class pamViewFX.fxNodes.connectionPane.StandardConnectionNode
Create a default plug and adds to the ConnectionNode.
addDefaultPlug() - Method in class pamViewFX.fxNodes.connectionPane.structures.ConnectionGroupStructure
Create a default plug and adds to the ConnectionNode.
addDefaultSocket() - Method in class pamViewFX.fxNodes.connectionPane.StandardConnectionNode
Create a default socket which has layout bounds binded to the ConnectionRectangle.
addDelayOffset(double) - Method in class Localiser.algorithms.TimeDelayData
Add a constant offset to the time delay
addDeletedUnit(PamDataUnit) - Method in class PamguardMVC.SaveRequirements
Add a deleted unit
addDeleteIndexes(int) - Method in class PamguardMVC.SaveRequirements
 
addDependency(PamDependency) - Method in interface PamModel.PamDependent
 
addDependency(PamDependency) - Method in class PamModel.PamModuleInfo
 
addDetection(PamDataUnit) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.CorrelationManager
Called when a new detection is added.
addDetection(PamDataUnit, int) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.IDIManager
Add a detection to the ICIManager and update the master time series.
addDetection(PamDataUnit, int) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.StandardMHTChi2Provider
 
addDetection(T) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.MHTKernel
Add a new data into the possibility mix.
addDetection(T, int) - Method in interface clickTrainDetector.clickTrainAlgorithms.mht.MHTChi2Provider
Called every time a new detection is added.
addDetectionGroupListener(DetectionGroupListener) - Method in class dataPlotsFX.overlaymark.TDMarkerFX
Add the detection group listener.
addDetectionPlot(DetectionPlot<?>) - Method in class detectionPlotFX.data.DDDataInfo
Add a type of data unit to the list.
addDetectionSpecificFields(CSVPrinter, T, int) - Method in class export.CSVExport.CSVDataUnitExport
Add detection specific fields to a csvprinter object.
addDetectionSpecificFields(ListVector.NamedBuilder, PamDataUnit, int) - Method in class export.RExport.RClickExport
 
addDetectionSpecificFields(ListVector.NamedBuilder, PamDataUnit, int) - Method in class export.RExport.RRawExport
 
addDetectionSpecificFields(ListVector.NamedBuilder, T, int) - Method in class export.RExport.RDataUnitExport
Add detection specific fields to a structure.
addDetectionSpecificFields(ListVector.NamedBuilder, ConnectedRegionDataUnit, int) - Method in class export.RExport.RWhistleExport
 
addDetectionSpecificFields(Struct, int, PamDataUnit) - Method in class export.MLExport.MLClickExport
 
addDetectionSpecificFields(Struct, int, PamDataUnit) - Method in class export.MLExport.MLRawExport
 
addDetectionSpecificFields(Struct, int, T) - Method in class export.MLExport.MLDataUnitExport
Add detection specific fields to a structure.
addDetectionSpecificFields(Struct, int, ConnectedRegionDataUnit) - Method in class export.MLExport.MLWhistleMoanExport
 
addDetectorMenuItems(ClickControl, JMenu, int) - Method in class rocca.RoccaControl
Adds a menu item when in viewer mode to the Click Detector menu, to pass events to Rocca for measurement.
addDetectorMenuItems(Frame, Container) - Method in class clickDetector.offlineFuncs.ClicksOffline
Add offline functions to the top of the main Detector menu when operating in viewer mode.
addDetectorMenuItems(Frame, JMenu) - Method in class targetMotionModule.TargetMotionLocaliser
 
addDetectorMenuItems(Frame, JMenu) - Method in class targetMotionOld.TargetMotionLocaliser
 
addDisableCount() - Static method in class PamController.PAMStartupEnabler
Call to disable the GUI.
addDisplay(WarningDisplay) - Method in class warnings.WarningSystem
Add a warning display
addDisplayListener(GroupDisplayListener) - Method in class dataPlotsFX.overlaymark.popUpMenu.OverlayGroupDisplay
Add listeners to both the detections and super detections display,
addDisplayListener(GroupDisplayListener) - Method in class detectionPlotFX.DetectionGroupDisplay
Add a display GroupDisplayListener.
addDisplayMenuItems(JPopupMenu) - Method in class clipgenerator.clipDisplay.ClipDisplayDecorations
Add additional functionality to the popup menu on a display unit.
addDisplayMenuItems(JPopupMenu) - Method in class difar.display.DifarClipDecorations
 
addDisplayPanelProvider(DisplayPanelProvider) - Static method in class Layout.DisplayProviderList
 
addDistanceMeters(double, double) - Method in class GPS.GpsData
 
addDistanceMeters(double, double) - Method in class PamUtils.LatLong
Add distances in metres East and metres North to a LatLong
Note that this assumes a flat earth model away from poles, so it's possible to create stupid values.
addDistanceMeters(double, double, double) - Method in class GPS.GpsData
 
addDistanceMeters(double, double, double) - Method in class PamUtils.LatLong
Add distances in metres East and metres North to a LatLong
Note that this assumes a flat earth model away from poles, so it's possible to create stupid values.
addDistanceMeters(PamVector) - Method in class GPS.GpsData
 
addDistanceMeters(PamVector) - Method in class PamUtils.LatLong
Add an x,y,z vector to the current location.
addDivisorListener() - Method in class dataPlotsFX.data.TDScaleInfo
The divisor listener.
ADDDOCUMENT - Enum constant in enum class tethys.database.TethysActions
 
addDownloadListener(DLDownloadListener) - Method in class rawDeepLearningClassifier.DLDownloadManager
Add a download listener to the array manager.
addDownstreamLocalisationContents(int) - Method in class beamformer.localiser.BeamFormLocaliserControl
This gets called when the output datablock has more localisation content options added to it (e.g.
addDownstreamLocalisationContents(int) - Method in class bearinglocaliser.BearingLocaliserControl
 
addDraggablePane(T) - Method in class pamViewFX.fxNodes.orderedList.PamDraggableList
Add a draggble pane to the list.
addDraggablePane(T, int) - Method in class pamViewFX.fxNodes.orderedList.PamDraggableList
Add a dragable pane to the list.
addDrawnUnit(long) - Method in class dataPlotsFX.clickPlotFX.ScrollingImageSegmenter.WritableImageSegment
Add a unit to the array reuse set...this will result in the data unit not being drawn again until the buffer is reset.
addDrawnUnit(long) - Method in class dataPlotsFX.clickPlotFX.ScrollingPlotSegmenter.PlotSegment
Add a unit to the array reuse set...this will result in the data unit not being drawn again until the buffer is reset.
addDriverToList(String, int[], int[]) - Method in class asiojni.AsioDriverInfos
Gets called back from the jni call to callJniGetAsioDrivers
addDriverToList(String, int[], int[]) - Method in class asiojni.AsioJniInterface
 
addElement() - Method in class Array.HydrophoneDialogPanel
 
addErrorCount() - Method in enum class nidaqdev.networkdaq.CRioErrorStrings
 
addExtraColumns(ArrayList<RavenColumnInfo>) - Method in class ravendata.RavenLogging
 
addExtraDataUser(NetworkDataUser) - Method in class networkTransfer.receive.NetworkReceiver
Add an extra data user which will get called with ALL data arriving over the network so can handle additional functions / data types not managed by the standard build in data user which doesn't know much about anything but PAMDataUnits.
addExtraTableInfo(PairedValueInfo) - Method in class networkTransfer.receive.NetworkReceiver
Add extra data fields to the table, data units, etc.
addF1KeyListener(JComponent) - Method in class loggerForms.controls.LoggerControl
 
addFile(T) - Method in class PamUtils.worker.filelist.FileListData
 
addFilePrefix(String) - Method in class PamUtils.PamFileFilter
Specify a prefix for the file filter
addFileType(String) - Method in class Map.MapFileFilter
 
addFileType(String) - Method in class PamUtils.PamFileFilter
 
addFilterMessage(String) - Method in class backupmanager.stream.StreamItem
Adds / concatenates messages from file filters.
addFitData(int, GpsData, LatLong, double, double, double, double, double, double) - Method in class Localiser.detectionGroupLocaliser.GroupDetection
Deprecated.
addFocusListenerToAllSubComponants(FocusListener, Component) - Static method in class loggerForms.controls.LoggerControl
 
addFolder() - Method in class PamUtils.worker.filelist.FileListData
 
addFolderChangeListener(FolderChangeListener) - Method in class PamUtils.SelectFolder
Add a folder change listener to receive notification if the browse button was used to select a new folder.
addFolderChangeListener(FolderChangeListener) - Method in class pamViewFX.fxNodes.utilityPanes.SelectFolderFX
Add a folder change listener to receive notification if the browse button was used to select a new folder.
addFormDescription(String) - Method in class loggerForms.FormsControl
 
addFragemnt(WhistleFragment) - Method in class whistleClassifier.BasicFragmentStore
 
addFragemnt(WhistleFragment) - Method in interface whistleClassifier.FragmentStore
Add a whistle fragment to the store
addFragemnt(WhistleFragment) - Method in class whistleClassifier.HistoFragmentStore
 
addGlobalMediumMenuItems(JMenu, JFrame) - Method in class PamController.soundMedium.GlobalMediumManager
Add menu items to the swing menu
addGraph() - Method in class dataPlots.TDControl
 
addGraph(Component) - Method in class dataPlots.layout.TDGraphContainer
 
addGraph(ActionEvent) - Method in class dataPlots.HidingControlPanel
 
addGraphParameters(GraphParameters) - Method in class dataPlots.TDParameters
 
addGraphParameters(TDGraphParametersFX) - Method in class dataPlotsFX.TDParametersFX
 
addGroup(List<PamDataUnit>) - Method in class group3dlocaliser.grouper.DetectionGroupedSet
 
addGroupLocaResult(GroupLocResult) - Method in class Localiser.detectionGroupLocaliser.GroupLocalisation
Add a target motion result and return the number of results now in the localisation
addGroupObserver(DetectionGroupObserver) - Method in class detectiongrouplocaliser.DetectionGroupControl
Add an observer of group structure or data changes.
addGUICompatabilityFlag(int) - Method in class PamModel.PamModuleInfo
Add a GUI compatibility flag.
addHistogram(PamHistogram) - Method in class pamMaths.HistogramDisplay
 
addHitHistogram(PamHistogram) - Method in class qa.chart.QAPamChart
 
addHitHistogram(PamHistogram, String) - Method in class qa.chart.QAPamChart
 
addHoverData(Shape, PamDataUnit) - Method in class PamView.GeneralProjector
 
addHoverData(Coordinate3d, PamDataUnit) - Method in class PamView.GeneralProjector
 
addHoverData(Coordinate3d, PamDataUnit, int) - Method in class PamView.GeneralProjector
 
addHoverData(HoverData) - Method in class PamView.GeneralProjector
Add hover data to the projector.
addHoverData(TransformShape, PamDataUnit) - Method in class PamView.GeneralProjector
Add hover data to the projector
addHoverData(TransformShape, PamDataUnit, int) - Method in class PamView.GeneralProjector
Add hover data to the projector
addHydrophone(Hydrophone) - Method in class Array.PamArray
 
addIcon(Component, String) - Method in class PamView.BasicKeyItem
 
addIcon(Icon, String) - Method in class PamView.BasicKeyItem
 
addIconToGrid(Icon) - Method in class PamView.dialog.IconPanel
 
addInputObserver(AnalogInputObserver) - Method in class analoginput.AnalogDevicesManager
 
addInstantObserver(PamObserver) - Method in class PamguardMVC.PamObservable
Add an observer which will always get called before data are saved or sent on to 'normal' processes.
addInternalPane(Region) - Method in class pamViewFX.PamGuiTabFX
Add an internal pane to the tab.
addInternalPane(UserDisplayNodeFX) - Method in class pamViewFX.PamGuiTabFX
Add an UserDisplayNodeFX to the graph.
addItem(LookupItem) - Method in class generalDatabase.lookupTables.LookupList
Add an item to the list
addItem(Object) - Method in class generalDatabase.external.crossreference.CrossReferenceSet
 
addItemError() - Method in class loggerForms.ItemDescription
Add one to the item error count.
addKeyListener(FormDescription, String) - Method in class loggerForms.FormsHotKeyControl
Add a new listener for a hotkey.
addLatLong(LatLong) - Method in class Map.MapContour
 
addLayoutComponent(Component, Object) - Method in class PamView.panel.CornerLayout
 
addLayoutComponent(String, Component) - Method in class dataMap.DataMapLayout
 
addLayoutComponent(String, Component) - Method in class PamView.panel.CornerLayout
 
addLayoutComponent(String, Component) - Method in class PamView.panel.VerticalLayout
Not used by this class
addLineData(SimpleLineData, boolean) - Method in class detectionPlotFX.plots.simple2d.Simple2DPlot
 
addLineListener(PJSerialLineListener) - Method in class serialComms.jserialcomm.PJSerialComm
 
addListSelectionListener(ListSelectionListener) - Method in class clickDetector.ClickSpectrumTemplateEditDialog
 
addListSelectionListener(ListSelectionListener) - Method in class clickDetector.offlineFuncs.OfflineEventListPanel
 
addListToDB(LookupList) - Method in class generalDatabase.lookupTables.LookUpTables
Adds the passed list to the end of the Lookup table in the current database.
addLocalisationContents(int) - Method in class beamformer.localiser.BFLDataOutput
 
addLocalisationContents(int) - Method in class bearinglocaliser.BearingDataBlock
 
addLocalisationContents(int) - Method in class PamguardMVC.PamDataBlock
Add a single flag indicating what localisation information might be available for the data in this block.
addLocaliserMenuItem(JPopupMenu, PamDataUnit) - Method in interface Localiser.DisplayLocaliserMenu
 
addLocaliserMenuItem(JPopupMenu, PamDataUnit) - Method in class targetMotionModule.panels.EventControlPanel
If we want to add a menu item to pop menu in another module then we need to check we can localise the detection, if so then add an option to the menu to localise the selected detection.
addLocaliserMenuItem(JPopupMenu, PamDataUnit) - Method in interface targetMotionModule.panels.TargetMotionControlPanel
 
addLocaliserMenuItem(JPopupMenu, PamDataUnit) - Method in class targetMotionModule.TargetMotionControl
 
addLocalization(PamDataUnit) - Method in class tethys.localization.LocalizationBuilder
 
addLocContent(int) - Method in interface PamDetection.LocalisationInfo
Add a flag to the loclaisation.
addLocContent(int) - Method in class PamDetection.LocContents
 
addLocContents(int) - Method in class PamDetection.AbstractLocalisation
 
addLocContents(int) - Method in class whistlesAndMoans.WhistleBearingInfo
 
addMainComponent(Component) - Method in class PamView.hidingpanel.HidingPanel
Add the mainComponent to the hiding panel
addManagesSymbol(ManagedSymbol) - Method in class PamView.PamOldSymbolManager
Add a managed symbol - wherever you want to use the symbol manager must implement the ManagedSymbol interface
addMeasurementListener(AngleMeasurementListener) - Method in class angleMeasurement.AngleMeasurement
 
addMenuItem(AbstractButton) - Method in class PamView.MenuItemEnabler
Add a menu item to a menu item enabler.
addMenuItems(JComponent) - Method in class pamScrollSystem.jumping.ScrollJumper
 
addMenuItems(JComponent) - Method in interface PamView.PamMenuParts
Add menu items to a menu or popup menu.
addMenuItems(JMenuItem) - Method in class backupmanager.bespoke.BespokeBackups
 
addMenuItems(JMenuItem, TDInfoMonitor) - Method in class dataPlots.data.TDDataProviderRegister
Add menu items to an existing menu.
addMenuItems(JMenu, JFrame) - Method in class generalDatabase.external.CopyManager
 
addMenuParts(PamMenuParts) - Method in class pamScrollSystem.AbstractPamScroller
Add menuparts, items that will be added to the menus little popup menu that appears from the middle of the scroller controls.
addMessage(String) - Method in interface whistleClassifier.training.MessageArea
 
addMissHistogram(PamHistogram) - Method in class qa.chart.QAPamChart
 
addMissHistogram(PamHistogram, String) - Method in class qa.chart.QAPamChart
 
addMissingClass(String) - Method in class PamController.DeserialisationWarning
 
addMissingUID() - Method in class dataMap.OfflineDataMapPoint
 
addModule(Frame, PamModuleInfo) - Method in class PamController.PamController
 
addModule(Frame, PamModuleInfo) - Method in interface PamController.PamControllerInterface
Add a new PamControlledUnit
addModule(Stage, PamModuleInfo) - Method in class dataModelFX.connectionNodes.ConnectionNodeFactory
Add an instance of this module type to the data model.
addModule(PamModuleInfo, String) - Method in class PamController.PamController
Add a module to the controller.
addMouseAdapter(MouseAdapter) - Method in class Map.MapController
 
addMouseAdapterToMapPanel(MouseAdapter) - Method in class Map.MapController
 
addMouseAdapterToMapPanel(MouseAdapter) - Method in class Map.MapTabPanelControl
 
addMouseAdapterToMapPanel(MouseAdapter) - Method in class Map.SimpleMap
 
addMouseHandler(ExtMouseAdapter) - Method in class PamView.paneloverlay.overlaymark.ExtMapMouseHandler
 
addMouseListener(MouseListener) - Method in class clickDetector.offlineFuncs.OfflineEventListPanel
 
addMouseListenerToAllSubComponants(MouseListener, Component) - Static method in class loggerForms.controls.LoggerControl
 
addMouseWheelSource(Component) - Method in class pamScrollSystem.AbstractPamScrollerAWT
Add a component to the scrollers mouse wheel listener.
addMultiPlexDataBlock(PamDataBlock) - Method in class PamguardMVC.PamProcess
Adds the process as an observer to the data block.
addNameSpaceToElements(Document, Element, String) - Method in class PamController.settings.output.xml.PamguardXMLWriter
Recursively walk the tree and add a namespace to every single element.
addNewConnectionNode(StandardConnectionNode, double, double) - Method in class pamViewFX.fxNodes.connectionPane.ConnectionPane
Add a new connection node to the connection pane.
addNewControl() - Method in class loggerForms.formdesign.FormEditDialog
Add a new control to the end of the controls list.
addNewData(RawDataUnit) - Method in class Acquisition.AudioDataQueue
 
addNewData(RawDataUnit, int) - Method in class Acquisition.AudioDataQueue
 
addNewData(PamDataUnit) - Method in class pamViewFX.fxNodes.pamScrollers.acousticScroller.AcousticDataGramGraphics
 
addNewData(PamDataUnit) - Method in interface pamViewFX.fxNodes.pamScrollers.acousticScroller.AcousticScrollerGraphics
Add new data units.
addNewData(PamDataUnit) - Method in class pamViewFX.fxNodes.pamScrollers.acousticScroller.FFTScrollBarGraphics
 
addNewData(PamDataUnit) - Method in class pamViewFX.fxNodes.pamScrollers.acousticScroller.RawScrollBarGraphics
 
addNewEndTime(long, Long) - Method in class generalDatabase.DBOfflineDataMapPoint
Add a new end time to the data map
addNewModule(PamControlledUnit, double, double) - Method in class dataModelFX.connectionNodes.ConnectionNodeFactory
Adds a new connection node to the
addNewModule(PamModuleInfo, double, double) - Method in class dataModelFX.connectionNodes.ConnectionNodeFactory
Called whenever there is an attempt to add a new module to the pane.
addNewPamData(PamDataUnit) - Method in class pamViewFX.fxNodes.pamScrollers.acousticScroller.AcousticScrollerFX
Add a new data unit to the scroll bar so it can be drawn on the background canvas.
addNewRawData(RawDataUnit) - Method in class dataPlotsFX.rawDataPlotFX.RawSoundPlotDataFX
Convert new RawDataUnit to pixels and then add to
invalid @link
#soundData
array to be plotted on next repaint call.
addNewStructure(DataModelModulePane.StructureRectangle, double, double) - Method in class dataModelFX.connectionNodes.ConnectionNodeFactory
Called whenever there is an attempt to add a structure to the pane.
addNoiseMeasurementBand(int, NoiseMeasurementBand) - Method in class noiseMonitor.NoiseSettings
Add a noise measurement band at a specific place in the list.
addNoiseMeasurementBand(NoiseMeasurementBand) - Method in class noiseMonitor.NoiseSettings
Add a noise measurement band to the end of the list.
addNotificationHandler(SUDNotificationHandler) - Method in class Acquisition.sud.SUDNotificationManager
 
addNotifyable(QANotifyable) - Method in class qa.QAControl
Add something that can receive notifications from QA Control
addObserver(FileDateObserver) - Method in class Acquisition.filedate.FileDateDialogStrip
 
addObserver(FileDateObserver) - Method in class Acquisition.layoutFX.FileDataDialogStripFX
 
addObserver(BackupObserver) - Method in class backupmanager.BackupManager
Add an observer that will get updates as backups take place.
addObserver(EffortObserver) - Method in class effortmonitor.EffortControl
Add something that wants notificatins when status changes
addObserver(PamObserver) - Method in class PamguardMVC.PamDataBlock
 
addObserver(PamObserver) - Method in class PamguardMVC.PamObservable
Adds a PamObserver, which will then receive notifications when data is added.
addObserver(PamObserver) - Method in class PamguardMVC.PamRawDataBlock
 
addObserver(PamObserver, boolean) - Method in class loggerForms.monitor.FormsMonitorMaster
 
addObserver(PamObserver, boolean) - Method in class PamguardMVC.PamDataBlock
 
addObserver(PamObserver, boolean) - Method in class PamguardMVC.PamObservable
 
addObserver(PamObserver, boolean) - Method in class PamguardMVC.PamRawDataBlock
 
addObserver(PamScrollObserver) - Method in class pamScrollSystem.AbstractPamScroller
Ad an observer that will receive notifications when the the scroller moves.
addObserver(SimpleObserver<T>) - Method in class PamUtils.SimpleObservable
Add an observer
addObserver(OverlayMarkObserver) - Method in class PamView.paneloverlay.overlaymark.OverlayMarker
 
addObserver(OverlayMarkObserver) - Method in class PamView.paneloverlay.overlaymark.OverlayMarkObservers
Add a mark observer to the list.
addObserver(DeploymentTableObserver) - Method in class tethys.swing.PAMGuardDeploymentsTable
 
addOfflineDataMap(OfflineDataMap) - Method in class PamguardMVC.PamDataBlock
Adds a new offline datamap to the data block
addOfflineMenuItems(Container, Frame) - Method in class whistleClassifier.offline.ClassifierOffline
 
addOfflineSlice(SliceData) - Method in class whistlesAndMoans.ConnectedRegion
Add in a slice during offline mode.
addOfflineTaskGroup(OfflineTaskGroup) - Method in class PamController.PamControlledUnit
Registers the offlineTaskGroup with the PamControlledUnit on instantiation.
addOldPamData(Tunit) - Method in class PamguardMVC.PamDataBlock
Add early PAM data to a datablock.
addOneData(long) - Method in class dataMap.OfflineDataMapPoint
 
addOtherRelatedMenuItems(Frame, JMenu, String) - Method in class clickDetector.ClickControl
 
addOtherRelatedMenuItems(Frame, JMenu, String) - Method in class PamController.PamControlledUnit
 
addOutgoingMessageToQueue(String) - Method in class rockBlock.RockBlockProcess2
Adds a new String object to the outgoing messages queue.
addOutputDataBlock(PamDataBlock) - Method in class Array.HydrophoneProcess
 
addOutputDataBlock(PamDataBlock) - Method in class PamguardMVC.PamProcess
Adds an additional PamDataBlock to the process
addPamData(AngleDataUnit) - Method in class IMU.IMUDataBlock
 
addPamData(ClickDetection) - Method in class clickDetector.TrackedClickDataBlock
 
addPamData(ClickTrainDetection) - Method in class clickDetector.ClickTrainDataBlock
Deprecated.
 
addPamData(OfflineEventDataUnit) - Method in class clickDetector.offlineFuncs.OfflineEventDataBlock
 
addPamData(CPODClickTrainDataUnit) - Method in class cpod.CPODClickTrainDataBlock
 
addPamData(CPODClickTrainDataUnit, Long) - Method in class cpod.CPODClickTrainDataBlock
 
addPamData(DetectionGroupDataUnit) - Method in class detectiongrouplocaliser.DetectionGroupDataBlock
 
addPamData(DetectionGroupDataUnit, Long) - Method in class detectiongrouplocaliser.DetectionGroupDataBlock
 
addPamData(DifarDataUnit) - Method in class difar.DifarDataBlock
 
addPamData(GpsDataUnit) - Method in class GPS.GPSDataBlock
 
addPamData(ArrayList<SimpleClick>) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.test.SimpleClickDataBlock
Add a list of simple clicks to the data block.
addPamData(FormsDataUnit) - Method in class loggerForms.FormsDataBlock
 
addPamData(NMEADataUnit) - Method in class NMEA.NMEADataBlock
 
addPamData(RawDataUnit) - Method in class PamguardMVC.PamRawDataBlock
 
addPamData(PamDataUnit, Long) - Method in class beamformer.localiser.BFLDataOutput
 
addPamData(PamDataUnit, Long) - Method in class beamformer.localiser.QueuedDataBlock
 
addPamData(PamDataUnit, Long) - Method in class bearinglocaliser.BearingDataBlock
 
addPamData(T) - Method in class beamformer.continuous.BestBeamSelector
Add new pam data unit's here instead of to the output datablock.
addPamData(T) - Method in class clickTrainDetector.ClickTrainDataBlock
 
addPamData(T, Long) - Method in class clickTrainDetector.ClickTrainDataBlock
 
addPamData(Tunit) - Method in class PamguardMVC.PamDataBlock
Adds a new PamDataUnit to the PamDataBlock.
addPamData(Tunit) - Method in class PamguardMVC.SingletonDataBlock
 
addPamData(Tunit, Long) - Method in class PamguardMVC.PamDataBlock
Adds a new PamDataUnit to the PamDataBlock and force the UID to a specific value.
addPamProcess(int, PamProcess) - Method in class PamController.PamControlledUnit
Adds a PamProcess to the PamConrolledUnit at a specified position in the process list.
addPamProcess(PamProcess) - Method in class PamController.PamControlledUnit
Adds a PamProcess to the PamConrolledUnit
addPamScroller(AbstractPamScroller) - Method in class pamScrollSystem.AbstractScrollManager
Add a new scroller to the managed list.
addPamScroller(AbstractPamScroller) - Method in class pamScrollSystem.ViewerScrollerManager
 
addPamTab(TabInfo, UserDisplayNodeFX, boolean) - Method in class pamViewFX.PamGuiFX
Convenience function to add a closable tab to the display with a new UserDisplayNodeFX.
addPassData(boolean) - Method in class angleVetoes.AngleVetoes
Add data to pas / fail stats for display
addPeak(int, RWEDetectionPeak, int) - Method in class RightWhaleEdgeDetector.RWESound
Add a new peak to extend the slice.
addPeak(WhistlePeak) - Method in class whistleDetector.WhistleShape
Add a new peak to the contour
addPixel(int, int, FFTDataUnit) - Method in class whistlesAndMoans.ConnectedRegion
 
addPlotData(PamDataUnit, ScrollingPlotSegmenter.PlotSegment, TDProjectorFX, double) - Method in class dataPlotsFX.clickPlotFX.ScrollingPlotSegmenter
Add plot data to the plot segment.
addPlotData(PamDataUnit, TDProjectorFX, double) - Method in class dataPlotsFX.clickPlotFX.ScrollingPlotSegmenter
Draw the data on the plot segment
addPlotListener(PlotMouseAdapter) - Method in class dataPlots.layout.TDGraph
Add a mouse plot adapter to each panel on the graph.
addPlotMouseListener(PlotMouseListener) - Method in class dataPlots.layout.TDGraph
Add a plot mouse listener.
addPlotMouseMotionListener(PlotMouseMotionListener) - Method in class dataPlots.layout.TDGraph
Add a plot mouse motion listener.
addPlotZoomer(PlotZoomerAdapter) - Method in class dataPlots.layout.TDGraph
Add a plot zoomer adapter to the graph.
addPoint(FFTDataUnit, double, double[], int) - Method in class gpl.DetectedPeak
Add a point that was above threshold.
addPopupMenuItems(JPopupMenu, MouseEvent) - Method in class clipgenerator.clipDisplay.ClipDisplayPanel
 
addPositionData(DeploymentRecoveryDetails) - Static method in class tethys.TethysLocationFuncs
Add position data to DeploymentRecoveryDetails.
addPositionReport(AISPositionReport) - Method in class AIS.AISDataUnit
 
addProvider(OverlayMarker) - Method in class PamView.paneloverlay.overlaymark.OverlayMarkProviders
Remove a provider of spectrogram marks.
addQuadrature(PamVector...) - Static method in class pamMaths.PamVector
Add any number of vectors together in quadrature.
addQueueList(StationQueue) - Method in class loc3d_Thode.CrossStationMatcher
 
addRangeObserver(VisibleRangeObserver) - Method in class dataPlotsFX.scroller.TDAcousticScroller
The range spinner.
addRangeObserver(VisibleRangeObserver) - Method in class dataPlotsFX.scroller.TDPamScrollerFX
Add an observer for visible range changes in the scroll bar.
addRangeObserver(VisibleRangeObserver) - Method in class pamViewFX.fxNodes.pamScrollers.acousticScroller.AcousticScrollerFX
Add a range observer.
addRangeSpinnerListener(RangeSpinnerListener) - Method in class pamScrollSystem.RangeSpinner
Add a range spinner listener.
addRangeSpinnerListener(VisibleRangeObserver) - Method in class pamViewFX.fxNodes.pamScrollers.TimeRangeScrollSpinner
Add a range spinner list
addRawData(RawDataUnit, int) - Method in class Acquisition.rona.RonaGatherer
 
addRawData(PamDataUnit, ScrollingPlotSegmenter.PlotSegment, TDProjectorFX, double, int, Color) - Method in class dataPlotsFX.data.RawWavePlotManager
Draw the data unit.
addRelatedMenuItems(Frame, JMenu, String) - Method in class PamController.PamControlledUnit
 
addRenderingHints(Map<?, ?>) - Method in class pamViewFX.fxgraphics2d.FXGraphics2D
Adds all the supplied rendering hints.
addReport(Report) - Method in class reportWriter.Report
Add another report.
addReport(TethysReport) - Method in class tethys.reporter.TethysReporter
Add a report after attempting to write a document
addRequiredDataBlock(RequiredDataBlockInfo) - Method in class offlineProcessing.OfflineTask
Add a required data block.
addRequiredDataBlock(PamDataBlock) - Method in class offlineProcessing.OfflineTask
Add a required data block.
addRequiredDataBlock(PamDataBlock, long, long) - Method in class offlineProcessing.OfflineTask
Add a required data block.
addResizeListeners() - Method in class dataPlotsFX.layout.AxisPane
Deprecated.
Add a listeners to the canvas to check for resize and repaint.
addResizeListeners() - Method in class pamViewFX.fxNodes.pamAxis.PamAxisPane
Add a listeners to the canvas to check for resize and repaint.
addResizeListeners(Canvas) - Method in class dataPlotsFX.layout.TDGraphFX.TDPlotPane
Add a listeners to the canvas to check for resize and repaint.
ADDRESS - Static variable in class networkTransfer.send.NetworkSender
 
addResult(UIDStatusReport) - Method in class PamguardMVC.uid.UIDStatusReport
Add the counts of another result to this one.
addResults(GroupLocResult[]) - Method in class targetMotionOld.TargetMotionLocaliser
 
addResults(TargetMotionResult[]) - Method in class targetMotionModule.TargetMotionLocaliser
 
addScaleInfo(TDScaleInfo) - Method in class dataPlotsFX.data.TDDataInfoFX
Add a scale info.
addScroller(AbstractPamScroller) - Method in class pamScrollSystem.coupling.ScrollerCoupling
Add a new scroller to the coupling
addSection(ReportSection) - Method in class reportWriter.Report
Add a new section to the report
addSections(ReportSection[]) - Method in class reportWriter.Report
 
addSectionText(String) - Method in class reportWriter.ReportSection
Add text to the section.
addSelectedDataUnit(FoundDataUnit) - Method in class dataPlots.layout.TDGraph
Add a selected data unit to the current selected data unit list.
addSelectedDataUnit(ArrayList<FoundDataUnit>) - Method in class dataPlots.layout.TDGraph
Add a list of data units to the end current selected data units.
addSelectionListener(ActionListener) - Method in class PamView.dialog.SourcePanel
Add a listener to the data source drop down list
addSelectionListener(ChangeListener) - Method in class pamViewFX.fxNodes.utilityPanes.SourcePaneFX
Add a listener to the data source drop down list
addSelectionListener(ClusterSelectionListener) - Method in class qa.swing.ClusterSelectPanel
Add a selection listener which will receive notifications if any of the check boxes are changed.
addSelectionMenuItems(JComponent, Window, boolean, boolean, boolean) - Method in class PamView.paneloverlay.OverlayDataManager
Add all items associated with the list to a
addSelectObserver(SimpleDataObserver) - Method in class pamScrollSystem.jumping.ScrollJumper
Add an observer which will get notifications whenever the selected data unit changes.
addSensorData(float[], int) - Method in class d3.D3DataUnit
 
addSeries(String, double[], double[]) - Method in class qa.chart.fx.QAChart
Add a data series to the chart
addSeries(String, double[], double[]) - Method in class reportWriter.ReportChart
Add a data series to the chart
addSeries(PamChartSeries) - Method in class PamView.chart.PamChart
 
addSet(int, SweepClassifierSet) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierParameters
 
addSet(SweepClassifierSet) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierParameters
 
addSettings(Serializable) - Method in class spectrogramNoiseReduction.SpectrogramNoiseSettings
 
addSettings(PamControlledUnitSettings) - Method in class PamController.PamSettingsGroup
Add settings to the list of different unit settings
addSettingsGroup(PamSettingsGroup) - Method in class generalDatabase.DBSettingsStore
 
addSettingsListener(SettingsListener) - Method in interface pamViewFX.fxSettingsPanes.DynamicSettings
Add a settings listener to the pane.
addSettingsListener(SettingsListener) - Method in class pamViewFX.fxSettingsPanes.DynamicSettingsPane
Add a settings listener to the pane.
addSettingsListener(SettingsListener) - Method in class pamViewFX.symbol.StandardSymbolOptionsPane
 
addSettingsListener(SettingsListener) - Method in class pamViewFX.symbol.SymbolModifierPane
Add a settings listener to the pane.
addSettingsListener(SettingsListener) - Method in class rawDeepLearningClassifier.layoutFX.dlTransfroms.DLTransformPane
Add a settings listener to the pane.
addSettingsPane(TDSettingsPane) - Method in class dataPlotsFX.layout.TDHidingTabPane
Add a settings pane to the hiding tab.
addSimObject(SimObject) - Method in class simulatedAcquisition.SimParameters
 
addSimpleClick(SimpleClick) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtMAT.MHTAlgorithmMAT
Add a simple click to the click train.
addSimpleClick(SimpleClick) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.test.MHTTestAlgorithm
Add a simple click to the click train.
addSingleData(PamObservable, PamDataUnit) - Method in class gpl.GPLProcess
 
addSingleData(PamObservable, PamDataUnit) - Method in class PamguardMVC.blockprocess.PamBlockProcess
Called in sequence for data in a block so it can run detectors
addSonobuoyAnnotation(StreamerDataUnit, TimestampAnnotationType, long) - Method in class difar.SonobuoyManager
 
addSource(PamDataBlock) - Method in class pamViewFX.fxNodes.utilityPanes.SourcePaneFX
Add an additional source to the list of available datas.
addSourcePanelMonitor(SourcePanelMonitor) - Method in class PamView.dialog.SourcePanel
 
addSourcePanelMonitor(SourcePanelMonitor) - Method in class pamViewFX.fxNodes.utilityPanes.SourcePaneFX
 
addSourceType(Class) - Method in class PamView.dialog.SourcePanel
 
addSourceType(Class, boolean) - Method in class pamViewFX.fxNodes.utilityPanes.SourcePaneFX
Set the source type for this SourcePanel
addSpecialTimeRange(double) - Method in class pamScrollSystem.RangeSpinner
Add a single special time range, e.g.
addSpecialTimeRange(double[]) - Method in class pamScrollSystem.RangeSpinner
Add some special time ranges, e.g.
addSpeciesParams(DifarParameters.SpeciesParams, boolean) - Method in class difar.DifarParameters
Create a new set of audio clip parameters for a given species
addSpeciesTreeVotes(double[]) - Method in class rocca.RoccaSightingDataUnit
Adds the passed array of tree votes to the current array.
addSpeciesTreeVotes(String, double[]) - Method in class rocca.RoccaSidePanel
Finds the RoccaSightingDataUnit with the passed sighting number, and adds the tree votes to the running total.
addSpectrogramMarkObserver(SpectrogramMarkObserver) - Static method in class Spectrogram.SpectrogramMarkObservers
Deprecated.
addSQLLogging(MarkDataBlock) - Method in class annotation.handler.AnnotationChoiceHandler
 
addStateObserver(TethysStateObserver) - Method in class tethys.TethysControl
Add a new state observer.
addStreamer(Streamer) - Method in class Array.PamArray
Add a streamer and return the streamer id which will be one less than the number of streamers.
addStreamerListener(ArrayChangeListener) - Method in class Array.layoutFX.HydrophonesPane
Add a listener which is called whenever a hydrophone is added, removed or changed.
addStreamerListener(ArrayChangeListener) - Method in class Array.layoutFX.StreamersPane
Add a listener which is called whenever a streamer is added, removed or changed.
addSubDetection(ClickDetection) - Method in class clickDetector.ClickTrainDetection
 
addSubDetection(PamDataUnit) - Method in class clickTrainDetector.CTDataUnit
 
addSubDetection(QASequenceDataUnit) - Method in class qa.QATestDataUnit
 
addSubDetection(T) - Method in class Localiser.detectionGroupLocaliser.GroupDetection
 
addSubDetection(T) - Method in class PamguardMVC.superdet.SuperDetection
Add a sub detection to the sub detection list.
addSubDetectionInfo(SubdetectionInfo<T>) - Method in class PamguardMVC.superdet.SuperDetection
 
addSubDetections(List<PamDataUnit>) - Method in class clickTrainDetector.CTDataUnit
 
addSubDetections(List<PamDataUnit>) - Method in class clickTrainDetector.CTDetectionGroupDataUnit
 
addSubDetections(List<T>) - Method in class PamguardMVC.superdet.SuperDetection
Add multiple sub detections from a list.
addSubSettings(PamControlledUnitSettings) - Method in class PamController.settings.SettingsImportGroup
add sub settings which seem somehow related to the main setting.
addSubtableItemToList(PamSubtableData) - Method in class generalDatabase.PamSubtableData
 
addSuperDetection(SuperDetection) - Method in class PamguardMVC.PamDataUnit
 
addSymbol(PamSymbolFX, double, double) - Method in class detectionPlotFX.plots.simple2d.Simple2DPlot
 
addSymbol(PamSymbolFX, Point2D) - Method in class detectionPlotFX.plots.simple2d.Simple2DPlot
 
addSymbolChnageListener(SymbolChangeListener) - Method in class PamView.symbol.StandardSymbolManager
Add a symbol chnage listener
addSymbolModifier(SymbolModifier) - Method in class PamView.symbol.PamSymbolChooser
Add a symbol modifier.
addSymbolModifier(SymbolModifier, int) - Method in class PamView.symbol.PamSymbolChooser
Add a symbol modifier at a specific position in the list.
addSymbolModifier(SymbolModifier, Class) - Method in class PamView.symbol.PamSymbolChooser
Add a symbol modifier directly after a different symbol modifier of a given class.
addSymbolModifiers(PamSymbolChooser) - Method in class clickDetector.tdPlots.ClickDetSymbolManager
 
addSymbolModifiers(PamSymbolChooser) - Method in class clickTrainDetector.layout.ClickTrainSymbolManager
 
addSymbolModifiers(PamSymbolChooser) - Method in class clickTrainDetector.layout.UnconfirmedCTSymbolManager
 
addSymbolModifiers(PamSymbolChooser) - Method in class cpod.CPODSymbolManager
 
addSymbolModifiers(PamSymbolChooser) - Method in class gpl.graphfx.GPLSymbolManager
 
addSymbolModifiers(PamSymbolChooser) - Method in class loggerForms.symbol.LoggerSymbolManager
 
addSymbolModifiers(PamSymbolChooser) - Method in class PamguardMVC.superdet.swing.SuperDetectionSymbolManager
 
addSymbolModifiers(PamSymbolChooser) - Method in class PamView.symbol.PamSymbolManager
Add a list of available (AVAILABLE, not used) symbol modifiers to the chooser when it is created.
addSymbolModifiers(PamSymbolChooser) - Method in class PamView.symbol.SymbolOnlyManager
 
addSymbolModifiers(PamSymbolChooser) - Method in class RightWhaleEdgeDetector.graphics.RWESymbolManager
 
addSymbolModifiers(PamSymbolChooser) - Method in class whistlesAndMoans.plots.WhistleSymbolManager
 
addSymbolOption(int) - Method in class PamView.symbol.StandardSymbolManager
Add an option to the symbol manager
addTab(String, Icon, Component, boolean) - Method in class PamView.hidingpanel.TabbedHidingPane
 
addTab(String, Icon, Component, boolean, int) - Method in class PamView.hidingpanel.TabbedHidingPane
 
addTab(PamGuiTabFX) - Method in class pamViewFX.PamGuiFX
Add a tab to the tab pane.
addTabChangeListener(ChangeListener) - Method in class PamView.hidingpanel.TabbedHidingPane
 
addTabEndRegion(Region) - Method in class pamViewFX.fxNodes.PamTabPaneSkin
 
addTableItem(PamTableItem) - Method in class generalDatabase.EmptyTableDefinition
Adds a new table item
addTableItem(PamTableItem) - Method in class generalDatabase.external.CopyTableSourceDefinition
 
addTableItems(EmptyTableDefinition) - Method in class annotation.calcs.snr.SnrSqlAddon
 
addTableItems(EmptyTableDefinition) - Method in class annotation.calcs.spl.SPLSqlAddon
 
addTableItems(EmptyTableDefinition) - Method in class annotation.calcs.wav.WavSqlAddon
 
addTableItems(EmptyTableDefinition) - Method in class annotation.string.StringSQLLogging
 
addTableItems(EmptyTableDefinition) - Method in class annotation.timestamp.TimestampSQLLogging
 
addTableItems(EmptyTableDefinition) - Method in class annotation.userforms.UserFormSQLAddon
 
addTableItems(EmptyTableDefinition) - Method in class beamformer.annotation.BFAnnotationLogging
 
addTableItems(EmptyTableDefinition) - Method in class bearinglocaliser.annotation.BearingAnnotationSQL
 
addTableItems(EmptyTableDefinition) - Method in class clickDetector.ClickClassifiers.annotation.ClickAnnotationSQL
 
addTableItems(EmptyTableDefinition) - Method in interface generalDatabase.SQLLoggingAddon
Add a load of columns to an existing table definition
addTableItems(EmptyTableDefinition) - Method in class matchedTemplateClassifer.annotation.MatchedClickAnnotationSQL
 
addTableItems(EmptyTableDefinition) - Method in class nidaqdev.networkdaq.NIDaqLogging
 
addTableItems(EmptyTableDefinition) - Method in class PamUtils.LatLongDatabaseSet
Add the table items to a PAM Table Definition
addTableItems(EmptyTableDefinition) - Method in class rawDeepLearningClassifier.logging.DLAnnotationSQL
 
addTableItems(EmptyTableDefinition) - Method in class targetMotionOld.TargetMotionSQLLogging
 
addTableObserver(StreamTableObserver) - Method in class tethys.swing.DatablockSynchPanel
 
addTabStartRegion(Region) - Method in class pamViewFX.fxNodes.PamTabPaneSkin
 
addTargetConfiguration(TargetConfiguration) - Method in class likelihoodDetectionModule.TreeTableModel
Adds the target configuration.
addTargetConfiguration(TargetConfiguration) - Method in class likelihoodDetectionModule.TreeTableModelAdapter
Adds the target configuration.
addTargetMotionResult(GroupLocResult) - Method in class targetMotionOld.TargetMotionLocalisation
Deprecated.
Add a target motion result and return the number of results now in the localisation
addTask(OfflineTask) - Method in class offlineProcessing.OfflineTaskGroup
 
addTasks(List<OfflineTask>) - Method in class offlineProcessing.OfflineTaskGroup
Add a list of offline tasks.
addTDGraph() - Method in class dataPlotsFX.layout.TDDisplayFX
Add a new graph to the time base display
addTempSocket(ConnectorNode) - Method in class pamViewFX.fxNodes.connectionPane.ConnectionLine
Add a temporary socket to the line.
addTestSet(String, QACluster, QALocationGenerator) - Method in class qa.generator.QAGeneratorProcess
 
addTestSet(QATestDataUnit) - Method in class qa.generator.QAGeneratorProcess
 
AddThenMultiplyThenAdd - Class in analoginput.calibration
Add Then Multiply then Add is a calibration method in it that has some unnecessary, but useful redundancy.
AddThenMultiplyThenAdd() - Constructor for class analoginput.calibration.AddThenMultiplyThenAdd
 
addTimingError(ArrayList<ArrayList<Double>>, double, float) - Static method in class Localiser.algorithms.genericLocaliser.Chi2TimeDelays
Adds the a constant timing error to the time delays error array e.g.
addTip(PamTip) - Method in class tipOfTheDay.TipOfTheDayManager
 
addTipRandom(PamTip) - Method in class tipOfTheDay.TipOfTheDayManager
 
addToAverageWaveform(PamDataUnit) - Method in class clickTrainDetector.CTDataUnit
Adds to the average waveform is the data unit contains raw info.
addToEvent(DetectionGroupSummary, PamDataUnit, boolean) - Method in class detectiongrouplocaliser.DetectionGroupProcess
Add some detections to an existing event
addToolbarNode(Node) - Method in class pamViewFX.PamGuiFX.ToolBarPane
Add a node to the content area of the toolbar.
addToParent(JComponent, GridBagConstraints) - Method in class PamView.dialog.smart.ImmediateTextField
Add the components to the parent component.
addToSpecialDatablock(PamDataBlock) - Method in class pamScrollSystem.AbstractScrollManager
Add a data block to the special data block list.
addToSpecialDatablock(PamDataBlock, long, long) - Method in class pamScrollSystem.AbstractScrollManager
Add a data block to the special data block list.
addToSpectrum() - Method in class clickDetector.ClickSpectrumTemplateEditDialog
Save the average event data to a ClickTemplate class and add to list of click templates.
addToTable(PamCursor, UIDTrackerData) - Method in class PamguardMVC.uid.DatabaseUIDFunctions
Add the name/uid pair to the tracker table.
addTrackedGroup(String) - Method in class difar.DifarParameters
 
addTreeModelListener(TreeModelListener) - Method in class likelihoodDetectionModule.TreeTableModel
Adds a listener for TreeModel events.
addTreeModelListener(TreeModelListener) - Method in class PamView.symbol.modifier.swing.SymbolTreeModel
 
addTriggerParams(DifarParameters.DifarTriggerParams) - Method in class difar.DifarParameters
Add a new trigger Parameters to the list.
addUnitInfo(PamControlledUnit) - Method in class PamView.GuiFrameSettings
 
addUpdatableComponent(LookupComponent) - Method in class generalDatabase.lookupTables.LookUpTables
Add a lookup component which can be updated automatically should there be any changes to the components topic.
addUpdateUnit(PamDataUnit) - Method in class PamguardMVC.SaveRequirements
Add an update unit
addURL(URL) - Method in class PamModel.PamModel.PluginClassloader
 
addUserDefined(Detection.Parameters, String, String) - Method in class tethys.pamdata.AutoTethysProvider
 
addUserDefined(LocalizationType.Parameters, String, String) - Method in class tethys.localization.LocalizationBuilder
 
addUserDisplay(UserDisplayProvider, DisplayProviderParameters) - Method in class userDisplay.UserDisplayTabPanelControl
Ad a display generated by a different module
addUserDisplayProvider(UserDisplayProvider) - Static method in class userDisplay.UserDisplayControl
Add a reference to the list of providers of user displays.
addValueChangeListener(Object) - Method in class pamViewFX.fxNodes.utilityPanes.SimpleFilterPaneFX
 
addValueListener(ChangeListener) - Method in class pamViewFX.fxNodes.pamScrollers.acousticScroller.ScrollBarPane
Convenience function which adds a change listener to the current value and visible amount prooperty.
addVeto(AngleVeto) - Method in class angleVetoes.AngleVetoParameters
Add a veto to the list.
addView(PamViewInterface) - Method in class PamController.PamController
 
addView(PamViewInterface) - Method in interface PamController.PAMControllerGUI
Add a PAMView Interface.
addView(PamViewInterface) - Method in interface PamController.PamControllerInterface
Adds a new view to the system
addView(PamViewInterface) - Method in class PamView.GuiFrameManager
 
addView(PamViewInterface) - Method in class PamView.NullGuiController
 
addView(PamViewInterface) - Method in class pamViewFX.PamGuiManagerFX
 
addWarning(PamWarning) - Method in class clickTrainDetector.layout.warnings.CTWarningManager
Add a warning to the click train detector.
addWarning(PamWarning) - Method in class warnings.WarningSystem
Add a warning, will remove first if the same one is already in there.
addWaveform(double[], float) - Method in class PamUtils.avrgwaveform.AverageWaveform
Add a waveform to the average waveform and spectra.
addWaveform(double[], float, boolean) - Method in class PamUtils.avrgwaveform.AverageWaveform
Add a waveform to the average waveform and spectra.
addWaveform(double[], float, int, boolean) - Method in class PamUtils.avrgwaveform.AverageWaveform
Add a waveform to the average waveform and spectra.
addWaveform(double, double, double, float, int) - Method in class PamUtils.avrgwaveform.AverageWaveform
Add to an average spectra when no raw data is present e.g.
addWhistle(ShapeDataUnit) - Method in class whistleDetector.EventDataUnit
 
addZoomables() - Method in class dataPlots.mouse.PlotZoomerAdapter
Clear any existing zoomables and add new zoomables to each plot panel.
adjustmentValueChanged(AdjustmentEvent) - Method in class JSSHTerminal.MainPanel
 
AdminTools - Class in PamController
 
AdminTools() - Constructor for class PamController.AdminTools
 
ADSTATUSHUNG - Static variable in class mcc.mccjna.MCCConstants
 
ADV_POP_UP - Static variable in class dataPlotsFX.TDGraphParametersFX
Adv pop up menu;
AdvElectricalNoisePane - Class in clickTrainDetector.layout.mht
Pane with controls to change advanced settings of the electrical noise pane.
AdvElectricalNoisePane() - Constructor for class clickTrainDetector.layout.mht.AdvElectricalNoisePane
 
AdvMHTVarPane - Class in clickTrainDetector.layout.mht
Pane with a few more advanced settings for the MHT variables.
AdvMHTVarPane(SimpleChi2VarParams) - Constructor for class clickTrainDetector.layout.mht.AdvMHTVarPane
 
AdvMHTVarPane(SimpleChi2VarParams, ResultConverter) - Constructor for class clickTrainDetector.layout.mht.AdvMHTVarPane
 
AFTER_LAST - Static variable in class dataMap.OfflineDataMap
 
afterLast() - Method in class generalDatabase.pamCursor.NonScrollablePamCursor
 
afterLast() - Method in class generalDatabase.pamCursor.PamCursor
 
afterLast() - Method in class generalDatabase.pamCursor.ScrollablePamCursor
 
AHEGATE - Static variable in class mcc.mccjna.MCCConstants
 
AHLGATE - Static variable in class mcc.mccjna.MCCConstants
 
AHLNEXTGATE - Static variable in class mcc.mccjna.MCCConstants
 
AHLPREVGATE - Static variable in class mcc.mccjna.MCCConstants
 
AHLTCPREVCTR - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_CURRENT - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_FULL_BRIDGE_62PT5mVV - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_FULL_BRIDGE_7PT8mVV - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_HALF_BRIDGE - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_QUART_BRIDGE_120OHM - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_QUART_BRIDGE_350OHM - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_RESISTANCE_10K2W - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_RESISTANCE_10K4W - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_RESISTANCE_1K2W - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_RESISTANCE_1K4W - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_RTD_1000OHM_3W - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_RTD_1000OHM_4W - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_RTD_100OHM_3W - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_RTD_100OHM_4W - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_TC - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHAN_TYPE_VOLTAGE - Static variable in class mcc.mccjna.MCCConstants
 
AI_CHANNEL_ENABLE - Static variable in class modbustcp.brainbox.BBED549
 
AI_ERROR_FLAGS - Static variable in class modbustcp.brainbox.BBED549
 
AI_FLOAT_HOLDING_REGISTERS - Static variable in class modbustcp.brainbox.BBED549
 
AI_FLOAT_INPUT_REGISTERS - Static variable in class modbustcp.brainbox.BBED549
 
AI_INPUT_RANGE - Static variable in class modbustcp.brainbox.BBED549
 
AI_INT_HOLDING_REGISTERS - Static variable in class modbustcp.brainbox.BBED549
 
AI_INT_INPUT_REGISTERS - Static variable in class modbustcp.brainbox.BBED549
 
AI_INTEGER_FORMAT - Static variable in class modbustcp.brainbox.BBED549
 
AIFUNCTION - Static variable in class mcc.mccjna.MCCConstants
 
AIINPUTMODENOTCONFIGURABLE - Static variable in class mcc.mccjna.MCCConstants
 
Air - Enum constant in enum class PamController.soundMedium.GlobalMedium.SoundMedium
 
AirgunControl - Class in AirgunDisplay
 
AirgunControl(String) - Constructor for class AirgunDisplay.AirgunControl
 
AirgunDataUnit - Class in AirgunDisplay
 
AirgunDataUnit(long, GpsData) - Constructor for class AirgunDisplay.AirgunDataUnit
 
AirgunDimensionsDrawing - Class in AirgunDisplay
 
AirgunDimensionsDrawing() - Constructor for class AirgunDisplay.AirgunDimensionsDrawing
 
AirgunDisplay - package AirgunDisplay
 
AirgunGraphics - Class in AirgunDisplay
 
AirgunGraphics(AirgunControl) - Constructor for class AirgunDisplay.AirgunGraphics
 
AirgunParameters - Class in AirgunDisplay
 
AirgunParameters() - Constructor for class AirgunDisplay.AirgunParameters
 
AirgunParametersDialog - Class in AirgunDisplay
 
AirgunParametersDialog(Frame) - Constructor for class AirgunDisplay.AirgunParametersDialog
 
AirgunProcess - Class in AirgunDisplay
 
AirgunProcess(AirgunControl) - Constructor for class AirgunDisplay.AirgunProcess
 
AIS - package AIS
 
AISBinaryDataSource - Class in AIS
 
AISBinaryDataSource(AISControl, AISDataBlock) - Constructor for class AIS.AISBinaryDataSource
 
AISBugSearch - Class in AIS
Read in some AIS data which caused AIS to crash on certain strings.
AISBugSearch() - Constructor for class AIS.AISBugSearch
 
AISControl - Class in AIS
 
AISControl(String) - Constructor for class AIS.AISControl
 
AISDataBlock - Class in AIS
 
AISDataBlock(AISControl, PamProcess) - Constructor for class AIS.AISDataBlock
 
AISDataSet - Interface in NMEA
A set of AIS data strings which can combined with simulated NMEA data for testing purposes.
AISDataUnit - Class in AIS
 
AISDataUnit(long) - Constructor for class AIS.AISDataUnit
Constructor used in data collection - doesn't do much
AISDataUnit(long, String, int) - Constructor for class AIS.AISDataUnit
Constructor used when reading back from binary files.
AISDisplayDialog - Class in AIS
 
AISGraphics - Class in AIS
 
AISGraphics(AISControl, AISDataBlock) - Constructor for class AIS.AISGraphics
 
AISLocalisation - Class in AIS
 
AISLocalisation(AISDataUnit) - Constructor for class AIS.AISLocalisation
 
AISLogger - Class in AIS
 
AISLogger(AISDataBlock, ProcessAISData) - Constructor for class AIS.AISLogger
 
AISParameters - Class in AIS
 
AISParameters() - Constructor for class AIS.AISParameters
 
AISPositionReport - Class in AIS
AIS Position report data
AISPositionReport(long, int, double, double, double, double, double, double) - Constructor for class AIS.AISPositionReport
Constructor to use when reading back from database.
AISReport - Class in AIS
 
AISReport() - Constructor for class AIS.AISReport
 
AISSettingsDialog - Class in AIS
 
AISStaticData - Class in AIS
 
AISStaticData(String, String, int, long, double, String) - Constructor for class AIS.AISStaticData
Constructor for use when reading back from database.
AISStringsTable - Class in AIS
 
alarm - package alarm
 
ALARM_CAN_DO - Static variable in class alarm.actions.AlarmAction
 
ALARM_CANT_DO - Static variable in class alarm.actions.AlarmAction
 
ALARM_DONT_KNOW - Static variable in class alarm.actions.AlarmAction
 
alarm.actions - package alarm.actions
 
alarm.actions.email - package alarm.actions.email
 
alarm.actions.serial - package alarm.actions.serial
 
alarm.actions.sound - package alarm.actions.sound
 
alarm.actions.tast - package alarm.actions.tast
 
alarm.actions.udp - package alarm.actions.udp
 
ALARM1CHIP1 - Static variable in class mcc.mccjna.MCCConstants
 
ALARM1CHIP2 - Static variable in class mcc.mccjna.MCCConstants
 
ALARM1CHIP3 - Static variable in class mcc.mccjna.MCCConstants
 
ALARM1CHIP4 - Static variable in class mcc.mccjna.MCCConstants
 
ALARM2CHIP1 - Static variable in class mcc.mccjna.MCCConstants
 
ALARM2CHIP2 - Static variable in class mcc.mccjna.MCCConstants
 
ALARM2CHIP3 - Static variable in class mcc.mccjna.MCCConstants
 
ALARM2CHIP4 - Static variable in class mcc.mccjna.MCCConstants
 
AlarmAction - Class in alarm.actions
 
AlarmAction(AlarmControl) - Constructor for class alarm.actions.AlarmAction
 
AlarmBackupFilter - Class in backupmanager.filter.alarm
 
AlarmBackupFilter(BackupAction, String) - Constructor for class backupmanager.filter.alarm.AlarmBackupFilter
 
alarmColours - Static variable in class alarm.AlarmParameters
 
AlarmControl - Class in alarm
 
AlarmControl(String) - Constructor for class alarm.AlarmControl
 
AlarmCounter - Class in alarm
 
AlarmCounter(AlarmControl) - Constructor for class alarm.AlarmCounter
 
AlarmCounterProvider - Class in alarm
 
AlarmCounterProvider() - Constructor for class alarm.AlarmCounterProvider
 
AlarmDataBlock - Class in alarm
 
AlarmDataBlock(AlarmProcess, String) - Constructor for class alarm.AlarmDataBlock
 
AlarmDataPoint - Class in alarm
 
AlarmDataPoint(long, double) - Constructor for class alarm.AlarmDataPoint
 
AlarmDataSource - Interface in alarm
 
AlarmDataUnit - Class in alarm
 
AlarmDataUnit(long) - Constructor for class alarm.AlarmDataUnit
Constructor for normal operation.
AlarmDataUnit(long, long[], long[], int, double) - Constructor for class alarm.AlarmDataUnit
constructor to use when reading back from databse
AlarmDecibelCounter - Class in alarm
BAse class for any alarm data source which is returning some kind of data measured in dB, which needs to be added in a different way to normal.
AlarmDecibelCounter(AlarmControl) - Constructor for class alarm.AlarmDecibelCounter
 
AlarmDialog - Class in alarm
 
AlarmDisplayTable - Class in alarm
 
AlarmDisplayTable(AlarmControl) - Constructor for class alarm.AlarmDisplayTable
 
AlarmFilterDialogPanel - Class in backupmanager.filter.alarm
 
AlarmFilterDialogPanel(AlarmBackupFilter) - Constructor for class backupmanager.filter.alarm.AlarmFilterDialogPanel
 
AlarmFilterParams - Class in backupmanager.filter.alarm
 
AlarmFilterParams() - Constructor for class backupmanager.filter.alarm.AlarmFilterParams
 
AlarmLogging - Class in alarm
 
AlarmLogging(AlarmDataBlock) - Constructor for class alarm.AlarmLogging
 
AlarmOfflineTask - Class in alarm
 
AlarmOfflineTask(AlarmControl) - Constructor for class alarm.AlarmOfflineTask
 
AlarmParameters - Class in alarm
 
AlarmParameters() - Constructor for class alarm.AlarmParameters
 
AlarmParamSet - Class in backupmanager.filter.alarm
Set of params for an individual alarm output.
AlarmParamSet() - Constructor for class backupmanager.filter.alarm.AlarmParamSet
 
AlarmProcess - Class in alarm
 
AlarmProcess(AlarmControl) - Constructor for class alarm.AlarmProcess
 
AlarmSerialAction - Class in alarm.actions.serial
Alarm action for serial port output.
AlarmSerialAction(AlarmControl) - Constructor for class alarm.actions.serial.AlarmSerialAction
 
AlarmSerialDialog - Class in alarm.actions.serial
 
AlarmSerialInterface - Class in alarm.actions.serial
Singleton class for all alarm actions to share a single serial port, it's settings etc.
AlarmSerialSettings - Class in alarm.actions.serial
 
AlarmSerialSettings() - Constructor for class alarm.actions.serial.AlarmSerialSettings
 
AlarmSidePanel - Class in alarm
 
AlarmSidePanel(AlarmControl) - Constructor for class alarm.AlarmSidePanel
 
alarmTxtAlert(ClickAlarm) - Method in class clickDetector.ClickSidePanel.SidePanel
Changes the label below the 'test alarm' button to indicate which, if any, alarm is currently sounding.
AlarmUDPAction - Class in alarm.actions.udp
 
AlarmUDPAction(AlarmControl) - Constructor for class alarm.actions.udp.AlarmUDPAction
 
AlarmUDPDialog - Class in alarm.actions.udp
 
AlarmUDPParams - Class in alarm.actions.udp
 
AlarmUDPParams() - Constructor for class alarm.actions.udp.AlarmUDPParams
 
ALEGATE - Static variable in class mcc.mccjna.MCCConstants
 
algoName - Static variable in class group3dlocaliser.algorithm.gridsearch.MFPGridSearch
 
ALGORITHM_FINISHED - Static variable in interface Localiser.algorithms.genericLocaliser.MinimisationAlgorithm
The algorithm has finished and a result is present
ALGORITHM_FINISHED_ERR - Static variable in interface Localiser.algorithms.genericLocaliser.MinimisationAlgorithm
The algorithm has finished but no result is present
ALGORITHM_RUNNING - Static variable in interface Localiser.algorithms.genericLocaliser.MinimisationAlgorithm
The algorithm is running
ALGORITHM_SELECTION_CHANGED - Static variable in class targetMotionModule.TargetMotionControl
a selected algorithm has been changed.
AlgorithmCard - Class in tethys.swing.export
 
AlgorithmCard(DetectionsExportWizard, TethysControl, PamDataBlock) - Constructor for class tethys.swing.export.AlgorithmCard
 
AlgorithmComboBoxEditor(String[]) - Constructor for class likelihoodDetectionModule.TreeTable.AlgorithmComboBoxEditor
Instantiates a new algorithm combo box editor.
ALGORITHMFIELD - Static variable in class clickTrainDetector.clickTrainAlgorithms.CTAlgorithmInfoLogging
 
algorithmProvider - Variable in class bearinglocaliser.BearingAlgorithmGroup
 
ALIGN_AT_CENTRE - Static variable in class pamScrollSystem.jumping.ScrollJumpParams
Align next found data unit in centre of screen
ALIGN_AT_EDGE - Static variable in class pamScrollSystem.jumping.ScrollJumpParams
Align next found data unit at edge of screen
alignment - Variable in class pamScrollSystem.jumping.ScrollJumpParams
When the next sound is found, align it at the edge of the display or in the centre
ALL_CANVAS - Static variable in class dataPlotsFX.layout.TDGraphFX.TDPlotPane
Repaint all canvas
ALL_CHANNELS - Static variable in class clipgenerator.ClipGenSetting
 
ALL_CHANNELS - Static variable in class difar.DifarParameters.DifarTriggerParams
include all channels in the clip
ALL_EVENT_TYPES - Static variable in class mcc.mccjna.MCCConstants
 
allAvailable - Variable in class Map.MapDetectionData
Plot all available data, regardless of time.
ALLDONE - Enum constant in enum class backupmanager.BackupProgress.STATE
 
allFilesTask(FileListData<WavFileType>) - Method in class PamUtils.worker.filelist.WavListWorker
 
allFilesTask(FileListData<T>) - Method in class PamUtils.worker.filelist.FileListWorker
Called once the main list of files has been made so that additional operations can be applied to every file, such as checking sample rates, etc.
ALLGATE - Static variable in class mcc.mccjna.MCCConstants
 
ALLMODES - Static variable in interface PamModel.PamPluginInterface
Used in conjunction with allowedModes() method to specify the plugin can be used in any PAMGUARD mode (Normal, Mixed and Viewer)
allocateComplexArray(int) - Static method in class fftManager.Complex
Allocate a new complex array in which each element has been created and it's contents set to 0 +i0;
allocateComplexArray(int, int) - Static method in class fftManager.Complex
 
allow3D - Variable in class Map.MapParameters
Allow 3D rotation using the shift key and mouse movement.
allowAnyClassification - Variable in class clickTrainDetector.dataselector.CTSelectParams
True of the click train detector needs a classifcation No !!!! This 'needsClassification' variable was been used the wrong way around throughout and is screwing the classiifer.
allowedModes() - Method in class angleMeasurement.angleMeasurementPlugin
 
allowedModes() - Method in class ArrayAccelerometer.ArrayAccelPlugin
 
allowedModes() - Method in class Azigram.AzigramPlugin
 
allowedModes() - Method in class IMU.IMUPlugin
 
allowedModes() - Method in class offlineProcessing.legacyremotestuff.offlineProcessingPlugin
 
allowedModes() - Method in interface PamModel.PamPluginInterface
Specifies the type of PAMGuard mode that the plugin is allowed to run in.
allowedModes() - Method in class quickAnnotation.quickAnnotationPlugin
 
allowedModes() - Method in class rawDeepLearningClassifier.RawDeepLearningPlugin
 
allowMultipleChoices - Variable in class clickTrainDetector.dataselector.CTSelectParams
In the data selector, if this is false it will only look at the best classifier, i.e.
allowMultipleParent - Variable in class dataModelFX.connectionNodes.DisplayConnectionNode
 
allowOuterScroll - Variable in class pamScrollSystem.jumping.ScrollJumpParams
If no more sounds are found, look in the datamap for the datablocks and move the outer scroller to the next time with data.
allowSubClasses - Variable in class pamViewFX.fxNodes.utilityPanes.SourcePaneFX.SourceSelection
 
allowViewerChanges - Variable in class loggerForms.FormsParameters
 
allowWildcard - Variable in class GPS.GPSParameters
 
ALLRANGES - Static variable in class modbustcp.brainbox.BBED549
 
AllSpHiModRatio - Variable in class cpod.FPODReader.FPODHeader
 
allTypes - Static variable in class PamDetection.LocContents
 
alpha - Variable in class rawDeepLearningClassifier.layoutFX.DLDetectionGraphics
 
alpha - Variable in class rawDeepLearningClassifier.layoutFX.DLGraphics
 
ALREADYACTIVE - Static variable in class mcc.mccjna.MCCConstants
 
ALREADYENABLED - Static variable in class mcc.mccjna.MCCConstants
 
alwaysClassify - Variable in class whistleClassifier.WhistleClassificationParameters
classify anyway, even if not enough fragments when quitting due to low whistle numbers.
ALWAYSLOW - Static variable in class mcc.mccjna.MCCConstants
 
AMBIG - Static variable in class rocca.RoccaClassifier
 
AMBIG - Static variable in class rocca.RoccaRFModel
 
AMBIGPCMSLOTREF - Static variable in class mcc.mccjna.MCCConstants
 
AMBIGSENSORONGP - Static variable in class mcc.mccjna.MCCConstants
 
amlitudeMinVal - Variable in class clipgenerator.clipDisplay.ClipDisplayParameters
 
AMMC_EXPERIMENTAL - Enum constant in enum class difar.DifarParameters.DifarDemuxTypes
 
AmmcDemux - Class in difar.demux
Experimental java based demultiplexer.
AmmcDemux() - Constructor for class difar.demux.AmmcDemux
 
AmpControl - Class in amplifier
 
AmpControl(String) - Constructor for class amplifier.AmpControl
 
AmpDialog - Class in amplifier
 
ampJumpEnable - Variable in class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.AmplitudeChi2Params
Whether the bearing jump is used.
AmplifiedDataBlock - Class in amplifier
 
AmplifiedDataBlock(String, PamProcess, int, float) - Constructor for class amplifier.AmplifiedDataBlock
 
AmplifiedDataBlock(String, PamProcess, int, float, boolean) - Constructor for class amplifier.AmplifiedDataBlock
 
amplifier - package amplifier
 
amplifyMeasuredAmplitudeByDB(double) - Method in class PamguardMVC.PamDataUnit
Amplifies the measured amplitude stored in the base unit by the gain (in dB).
amplifyMeasuredAmplitudeByLinear(double) - Method in class PamguardMVC.PamDataUnit
Amplifies the measured amplitude stored in the base unit by the linear gain.
amplitude - Variable in class clickTrainDetector.clickTrainAlgorithms.mht.mhtMAT.SimpleClick
The amplitude of the click in dB
amplitude - Variable in class simulatedAcquisition.SimObject
 
AMPLITUDE - Enum constant in enum class PamView.GeneralProjector.ParameterType
 
AMPLITUDE - Static variable in class cpod.dataSelector.StandardCPODFilterParams
The peak frequency value
AMPLITUDE_LIN - Enum constant in enum class PamView.GeneralProjector.ParameterType
 
AMPLITUDE_SCALE_DBREMPA - Static variable in class PamguardMVC.DataUnitBaseData
Amplitude value is in dB relative to 1 micropascal
AMPLITUDE_SCALE_LINREFSD - Static variable in class PamguardMVC.DataUnitBaseData
Amplitude scale is linear relative to full scale
AMPLITUDE_STEM - Enum constant in enum class PamView.GeneralProjector.ParameterType
 
AmplitudeChi2 - Class in clickTrainDetector.clickTrainAlgorithms.mht.mhtvar
Chi^2 value for dB amplitude of tracks.
AmplitudeChi2() - Constructor for class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.AmplitudeChi2
 
AmplitudeChi2AdvPane - Class in clickTrainDetector.layout.mht
 
AmplitudeChi2AdvPane(SimpleChi2VarParams, ResultConverter) - Constructor for class clickTrainDetector.layout.mht.AmplitudeChi2AdvPane
 
AmplitudeChi2Params - Class in clickTrainDetector.clickTrainAlgorithms.mht.mhtvar
 
AmplitudeChi2Params(SimpleChi2VarParams) - Constructor for class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.AmplitudeChi2Params
 
AmplitudeChi2Params(String) - Constructor for class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.AmplitudeChi2Params
 
AmplitudeChi2Params(String, String) - Constructor for class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.AmplitudeChi2Params
 
AmplitudeChi2Params(String, String, double, double) - Constructor for class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.AmplitudeChi2Params
 
AmplitudeChi2Params(String, String, double, double, double) - Constructor for class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.AmplitudeChi2Params
 
amplitudeLimits - Variable in class dataPlotsFX.scroller.TDAcousticScrollerParams
The amplitude limits of the color scale.
amplitudeLimits - Variable in class Spectrogram.SpectrogramParameters
Limits of amplitude range
amplitudeLimitsSerial - Variable in class dataPlotsFX.scrollingPlot2D.PlotParams2D
Amplitude limits- only used when serializing;
AmplitudeMHTVarPane - Class in clickTrainDetector.layout.mht
 
AmplitudeMHTVarPane(SimpleChi2VarParams, ResultConverter) - Constructor for class clickTrainDetector.layout.mht.AmplitudeMHTVarPane
 
amplitudeMinMax - Variable in class dataPlotsFX.scroller.TDAcousticScrollerParams
The min and max allowed amplitude for the colour scale
amplitudeRange - Variable in class clickDetector.BTDisplayParameters
 
amplitudeRange - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
amplitudeRange - Variable in class dataPlotsFX.clickPlotFX.ClickDisplayParams
The amplitude range
amplitudeRangeVal - Variable in class clipgenerator.clipDisplay.ClipDisplayParameters
 
amplitudeScaledLineLength - Variable in class difar.DifarParameters
Auto scale line length depending on range
amplitudeScaledOpacity - Variable in class difar.DifarParameters
 
amplitudeSelect - Variable in class clickDetector.BTDisplayParameters
 
amplitudeSelectChanged() - Method in class clickDetector.ClickBTDisplay
 
AmpParameters - Class in amplifier
 
AmpParameters() - Constructor for class amplifier.AmpParameters
 
AmpProcess - Class in amplifier
 
AmpProcess(AmpControl) - Constructor for class amplifier.AmpProcess
 
AmpReversals - Variable in class cpod.FPODReader.FPODdata
 
AMPS - Enum constant in enum class analoginput.AnalogRangeData.AnalogType
 
analEndTime - Variable in class PamController.PamViewParameters
Analysis offline may have gone through the data multiple times.
ANALOG - Static variable in class mcc.mccjna.MCCConstants
 
Analog_Add - Enum constant in enum class loggerForms.UDColName
 
ANALOG_DIFF - Static variable in class mcc.mccjna.MCCConstants
 
Analog_Multiply - Enum constant in enum class loggerForms.UDColName
 
ANALOG_SE - Static variable in class mcc.mccjna.MCCConstants
 
analogarraysensor - package analogarraysensor
 
analogarraysensor.swing - package analogarraysensor.swing
 
AnalogArraySensorDataBlock - Class in analogarraysensor
 
AnalogArraySensorDataBlock(String, ArraySensorControl, ArraySensorProcess) - Constructor for class analogarraysensor.AnalogArraySensorDataBlock
 
AnalogArraySensorDataUnit - Class in analogarraysensor
 
AnalogArraySensorDataUnit(long, int, AnalogSensorData[]) - Constructor for class analogarraysensor.AnalogArraySensorDataUnit
 
AnalogChannelPanel - Class in analoginput.swing
Construct a dialog panel with range information for a list of named channels
AnalogChannelPanel(SensorChannelInfo[], int, List<AnalogRangeData>, boolean) - Constructor for class analoginput.swing.AnalogChannelPanel
 
AnalogDeviceParams - Class in analoginput
 
AnalogDeviceParams() - Constructor for class analoginput.AnalogDeviceParams
 
AnalogDevicesManager - Class in analoginput
 
AnalogDevicesManager(SettingsNameProvider, AnalogSensorUser) - Constructor for class analoginput.AnalogDevicesManager
 
AnalogDeviceType - Interface in analoginput
 
AnalogDiagnosticsDisplay - Class in analoginput.swing
 
AnalogDiagnosticsDisplay(AnalogDevicesManager, UserDisplayControl, String) - Constructor for class analoginput.swing.AnalogDiagnosticsDisplay
 
AnalogDiagnosticsDisplayProvider - Class in analoginput.swing
 
AnalogDiagnosticsDisplayProvider(AnalogDevicesManager) - Constructor for class analoginput.swing.AnalogDiagnosticsDisplayProvider
 
AnalogDialogPanel - Class in analoginput.swing
 
AnalogDialogPanel(AnalogDevicesManager, PamDialog) - Constructor for class analoginput.swing.AnalogDialogPanel
 
analoginput - package analoginput
 
analoginput.brainboxes - package analoginput.brainboxes
 
analoginput.brainboxes.swing - package analoginput.brainboxes.swing
 
analoginput.calibration - package analoginput.calibration
 
analoginput.measurementcomputing - package analoginput.measurementcomputing
 
analoginput.measurementcomputing.swing - package analoginput.measurementcomputing.swing
 
analoginput.swing - package analoginput.swing
 
AnalogInputObserver - Interface in analoginput
 
AnalogInputParams - Class in analoginput
 
AnalogInputParams() - Constructor for class analoginput.AnalogInputParams
 
AnalogRangeData - Class in analoginput
 
AnalogRangeData(double[], AnalogRangeData.AnalogType) - Constructor for class analoginput.AnalogRangeData
 
AnalogRangeData.AnalogType - Enum Class in analoginput
 
AnalogRangeDataComparatator - Class in analoginput
 
AnalogRangeDataComparatator() - Constructor for class analoginput.AnalogRangeDataComparatator
 
AnalogReadException - Exception Class in analoginput
 
AnalogReadException(String) - Constructor for exception class analoginput.AnalogReadException
 
AnalogSensorData - Class in analoginput
 
AnalogSensorData(double, double) - Constructor for class analoginput.AnalogSensorData
 
AnalogSensorDialog - Class in analogarraysensor.swing
 
AnalogSensorUser - Interface in analoginput
Descriptions of a module that will use analog data.
analSelection - Variable in class clickDetector.offlineFuncs.OfflineParameters
 
analStartTime - Variable in class PamController.PamViewParameters
Analysis offline may have gone through the data multiple times.
ANALYSE_ALLDATA - Static variable in class clickDetector.offlineFuncs.OfflineParameters
 
ANALYSE_DATA - Static variable in class whistleClassifier.WhistleClassificationParameters
Analyse new data using existing settings.
ANALYSE_LOADEDDATA - Static variable in class clickDetector.offlineFuncs.OfflineParameters
 
analyseChain(MCMC.ChainResult) - Method in class Localiser.algorithms.genericLocaliser.MCMC.MCMC
Take an ArrayList of the Markov chain jumps and chi-squared values of each jump and calculate average values and the standard deviation for all dimensions.
AnalyseMCMCResults(ArrayList<Point3f>, ArrayList<Double>, int) - Method in class Localiser.algorithms.genericLocaliser.MCMC.old.MCMCLocaliser
Deprecated.
Take an ArrayList of the Markov chain jumps and chi-squared values of each jump and calculate source position.
analyseTest(QATestDataUnit) - Method in class qa.analyser.QAAnalyser
This is probably going to get called with a data unit from the generator datablock.
analyseTests(List<QATestDataUnit>) - Method in class qa.analyser.QAAnalyser
Call to process a whole load of tests, and if necessary, make a combined report with results of many different tests.
analyseTests(QATestDataUnit[]) - Method in class qa.analyser.QAAnalyser
Call to process a whole load of tests, and if necessary, make a combined report with results of many different tests.
analysisMethod - Variable in class Localiser.algorithms.genericLocaliser.MCMC.MCMC.ChainResult
The analysis method which was used to analyse the chain.
analysisTime - Variable in class rawDeepLearningClassifier.dlClassification.genericModel.StandardPrediction
Analysis time in seconds.
analyzeOfflineClicks(OfflineEventDataUnit) - Method in class rocca.RoccaControl
 
anchor - Variable in class PamView.panel.CornerLayoutContraint
 
Anchor - Enum Class in tethys.localization
Anchors for localization effort coordinate system.
ang() - Method in class fftManager.Complex
Gets the angle of a complex number
ang() - Method in class PamUtils.complex.ComplexArray
Gets the angle of all complex numbers in the array.
ang(int) - Method in class PamUtils.complex.ComplexArray
Gets the angle of a single complex number in the array
angle(PamVector) - Method in class pamMaths.PamVector
Calculate the angle between two vectors
ANGLE_TAB - Static variable in class videoRangePanel.layoutAWT.VRParametersDialog
 
angleAverageDegrees(Double, Double) - Static method in class PamUtils.PamUtils
Get the average of two angles in degrees.
angleAverageDegrees(Double, Double, double, double) - Static method in class PamUtils.PamUtils
Get the weighted average of two angles in degrees.
AngleCalibration - Class in angleMeasurement
Class to sort out angle calibration data.
AngleCalibration(double[], double[]) - Constructor for class angleMeasurement.AngleCalibration
 
AngleCalibrationDialog - Class in angleMeasurement
 
AngleControl - Class in angleMeasurement
 
AngleControl(String) - Constructor for class angleMeasurement.AngleControl
 
angleCorrection - Variable in class videoRangePanel.VRMeasurement
difference between image bearing and bearing to animal.
angleDataBlock - Variable in class videoRangePanel.VRParameters
The angle data block.
AngleDataBlock - Class in angleMeasurement
 
AngleDataBlock(AngleControl, String, PamProcess) - Constructor for class angleMeasurement.AngleDataBlock
 
AngleDataUnit - Class in angleMeasurement
Data unit for storing angular information, often used to store data from imu intruments (inertial measurement unit) and heading data from compass sensors.
AngleDataUnit(long, double, double, double) - Constructor for class angleMeasurement.AngleDataUnit
Constructor for heading data: Primarily used in AngleMeasurment module
AngleDataUnit(long, Double[]) - Constructor for class angleMeasurement.AngleDataUnit
Constructor for IMU angle data.
AngleDataUnit(long, Double[], Double[]) - Constructor for class angleMeasurement.AngleDataUnit
Constructor for IMU angle data.
AngleListener - Class in videoRangePanel.externalSensors
 
AngleListener(VRControl) - Constructor for class videoRangePanel.externalSensors.AngleListener
 
AngleLogging - Class in angleMeasurement
 
AngleLogging(AngleControl, PamDataBlock) - Constructor for class angleMeasurement.AngleLogging
 
AngleLoggingDialogPanel - Class in angleMeasurement
 
AngleLoggingDialogPanel() - Constructor for class angleMeasurement.AngleLoggingDialogPanel
 
AngleLoggingParameters - Class in angleMeasurement
 
AngleLoggingParameters() - Constructor for class angleMeasurement.AngleLoggingParameters
 
angleMeasurement - package angleMeasurement
 
AngleMeasurement - Class in angleMeasurement
 
AngleMeasurement(String) - Constructor for class angleMeasurement.AngleMeasurement
 
AngleMeasurementListener - Interface in angleMeasurement
 
angleMeasurementPlugin - Class in angleMeasurement
 
angleMeasurementPlugin() - Constructor for class angleMeasurement.angleMeasurementPlugin
 
angleOffset - Variable in class angleMeasurement.AngleParameters
 
AngleParameters - Class in angleMeasurement
 
AngleParameters() - Constructor for class angleMeasurement.AngleParameters
 
AngleProcess - Class in angleMeasurement
 
AngleProcess(AngleControl) - Constructor for class angleMeasurement.AngleProcess
 
angleRotation - Variable in class clickDetector.BTDisplayParameters
 
AngleSidePanel - Class in angleMeasurement
 
AngleSidePanel(AngleControl) - Constructor for class angleMeasurement.AngleSidePanel
 
angleStep - Variable in class simulatedAcquisition.movement.CircularMovementParams
 
angleTypeNames - Static variable in class clickDetector.BTDisplayParameters
 
AngleVeto - Class in angleVetoes
Data for a single angle veto.
AngleVeto() - Constructor for class angleVetoes.AngleVeto
 
AngleVeto(int, double, double) - Constructor for class angleVetoes.AngleVeto
 
AngleVetoDialog - Class in angleVetoes
Dialog to get data for a single angle veto.
AngleVetoDisplay - Class in angleVetoes
Dispaly for angle veto.
AngleVetoDisplay(AngleVetoes) - Constructor for class angleVetoes.AngleVetoDisplay
 
angleVetoes - package angleVetoes
 
AngleVetoes - Class in angleVetoes
Class to support functions to handle vetoes on angles to clicks
AngleVetoes(PamControlledUnit) - Constructor for class angleVetoes.AngleVetoes
 
AngleVetoesDialog - Class in angleVetoes
Dialog to manage multiple angle vetoes.
AngleVetoParameters - Class in angleVetoes
PArameters controlling angle vetoes for a particular detector.
AngleVetoParameters() - Constructor for class angleVetoes.AngleVetoParameters
 
animalCol - Static variable in class videoRangePanel.vrmethods.landMarkMethod.LandMarkGUIAWT
 
animalCol - Static variable in class videoRangePanel.vrmethods.landMarkMethod.LandMarkGUIFX
 
animalMark - Static variable in class videoRangePanel.vrmethods.landMarkMethod.LandMarkGUIAWT
 
animalMarker - Static variable in class videoRangePanel.layoutAWT.VRPanel
 
animalMarker - Static variable in class videoRangePanel.vrmethods.landMarkMethod.LandMarkGUIAWT
 
animalMarker - Static variable in class videoRangePanel.vrmethods.landMarkMethod.LandMarkGUIFX
 
animalPoint - Variable in class videoRangePanel.VRMeasurement
Animal point on the image
animalSymbol - Static variable in class videoRangePanel.layoutAWT.VRPanel
 
annotateDataBlock(Window, PamDataBlock) - Method in class annotation.tasks.AnnotationManager
 
annotateDataUnit(Window, PamDataUnit) - Method in class annotation.handler.AnnotationHandler
 
annotation - package annotation
 
annotation.binary - package annotation.binary
 
annotation.calcs.snr - package annotation.calcs.snr
 
annotation.calcs.spl - package annotation.calcs.spl
 
annotation.calcs.wav - package annotation.calcs.wav
 
annotation.classifier - package annotation.classifier
 
annotation.dataselect - package annotation.dataselect
 
annotation.dummy - package annotation.dummy
 
annotation.handler - package annotation.handler
 
annotation.localise.targetmotion - package annotation.localise.targetmotion
 
annotation.string - package annotation.string
 
annotation.tasks - package annotation.tasks
 
annotation.timestamp - package annotation.timestamp
 
annotation.userforms - package annotation.userforms
 
annotation.userforms.datasel - package annotation.userforms.datasel
 
AnnotationBinaryData - Class in annotation.binary
 
AnnotationBinaryData(int, short, DataAnnotationType<?>, String, byte[]) - Constructor for class annotation.binary.AnnotationBinaryData
Deprecated.
AnnotationBinaryData(short, DataAnnotationType<?>, String, byte[]) - Constructor for class annotation.binary.AnnotationBinaryData
 
AnnotationBinaryHandler<T extends DataAnnotation<?>> - Class in annotation.binary
Functions used by a specific DataAnnotationType to read and write binary data settings and retrieving that information in PamDataUnits.
AnnotationBinaryHandler(DataAnnotationType<T>) - Constructor for class annotation.binary.AnnotationBinaryHandler
 
AnnotationChoiceHandler - Class in annotation.handler
Annotation handler that provides functionality for the programmer to set things up so that the user can chose which types of annotation to use.
AnnotationChoiceHandler(PamDataBlock<PamDataUnit>) - Constructor for class annotation.handler.AnnotationChoiceHandler
 
AnnotationChoices - Class in annotation.handler
Class to handle choice of annotator and any other associated options.
AnnotationChoices() - Constructor for class annotation.handler.AnnotationChoices
 
AnnotationDataSelCreator<TDataAnnotation extends DataAnnotation> - Class in annotation.dataselect
 
AnnotationDataSelCreator(DataAnnotationType) - Constructor for class annotation.dataselect.AnnotationDataSelCreator
 
AnnotationDataSelector<TDataAnnotation extends DataAnnotation> - Class in annotation.dataselect
 
AnnotationDataSelector(DataAnnotationType<TDataAnnotation>, PamDataBlock, String, boolean) - Constructor for class annotation.dataselect.AnnotationDataSelector
 
AnnotationDialog - Class in annotation
General dialog that can be used with any annotation type.
AnnotationDialogPanel - Interface in annotation
General interface for dialog panels which get incorporated into other dialog panels for editing one or more annotations of a data unit.
AnnotationHandler - Class in annotation.handler
Manage annotation options for a datablock
AnnotationHandler(PamDataBlock<PamDataUnit>) - Constructor for class annotation.handler.AnnotationHandler
 
AnnotationList - Class in annotation
 
AnnotationList() - Constructor for class annotation.AnnotationList
 
AnnotationManager - Class in annotation.tasks
 
AnnotationManager() - Constructor for class annotation.tasks.AnnotationManager
 
annotationMark - package annotationMark
 
annotationMark.fx - package annotationMark.fx
 
annotationMark.spectrogram - package annotationMark.spectrogram
 
ANNOTATIONNAME - Static variable in class beamformer.annotation.BFAnnotationType
 
AnnotationOfflineTask - Class in annotation.tasks
 
AnnotationOfflineTask(PamDataBlock, DataAnnotationType) - Constructor for class annotation.tasks.AnnotationOfflineTask
 
AnnotationOptions - Class in annotation.handler
Annotation options.
AnnotationOptions(AnnotationOptions) - Constructor for class annotation.handler.AnnotationOptions
 
AnnotationOptions(String) - Constructor for class annotation.handler.AnnotationOptions
 
AnnotationSettingsDialog - Class in annotation
 
AnnotationSettingsPanel - Interface in annotation
Settings panel for configuring annotation types
AnnotationsPopup - Class in PamView
 
AnnotationsPopup(Window, Point, PamDataBlock) - Constructor for class PamView.AnnotationsPopup
 
AnnotationsSelectionPanel - Class in annotation.handler
 
AnnotationsSelectionPanel(AnnotationChoiceHandler) - Constructor for class annotation.handler.AnnotationsSelectionPanel
 
AnnotationSummaryPanel - Class in annotation
Display summary information about a data unit and it's annotations.
AnnotationSummaryPanel() - Constructor for class annotation.AnnotationSummaryPanel
 
AnnotationSymbolChooser - Interface in PamView.symbol
 
AnnotationSymbolOptions - Class in PamView.symbol
Symbol options for annotations.
AnnotationSymbolOptions() - Constructor for class PamView.symbol.AnnotationSymbolOptions
 
AnnotationSymboloptsPanel - Class in PamView.symbol
 
AnnotationSymboloptsPanel(AnnotationSymbolOptions) - Constructor for class PamView.symbol.AnnotationSymboloptsPanel
 
annotationVersion - Variable in class annotation.binary.AnnotationBinaryData
 
anotherScrollerMovedInner(long) - Method in class pamScrollSystem.AbstractPamScroller
Another managed scroller moved it's position
anotherScrollerMovedInner(long) - Method in class pamScrollSystem.PamScroller
 
anotherScrollerMovedInner(long) - Method in class pamScrollSystem.PamScrollerFX
 
anotherScrollerMovedInner(long) - Method in class pamScrollSystem.PamScrollSlider
 
anotherScrollerMovedInner(long) - Method in class pamScrollSystem.ScrollPaneAddon
 
anotherScrollerMovedInner(long) - Method in class pamViewFX.fxNodes.pamScrollers.acousticScroller.AcousticScrollerFX
 
anotherScrollerMovedOuter(long, long) - Method in class pamScrollSystem.AbstractPamScroller
Another managed scroller moved its outer position - will cause new data to be loaded.
ANSIStandard - Class in Filters
 
ANSIStandard() - Constructor for class Filters.ANSIStandard
 
ANTHROPOGENIC - Static variable in class tethys.species.ITISTypes
 
ANY_IFC - Static variable in class mcc.mccjna.DaqDeviceDescriptor
 
anySubTableItems(PAMSelectClause, PAMSelectClause) - Method in class generalDatabase.SuperDetLogging
find if any sub table items that satisfy a particular clause.
AOFUNCTION - Static variable in class mcc.mccjna.MCCConstants
 
append(double[][]) - Method in class wavFiles.WavFileWriter
Append data to a file which may or may not be closed already.
appendStringToOutputField(long, String) - Method in class UserInput.UserInputPanel
 
appendStringToOutputField(String) - Method in class UserInput.UserInputPanel
 
appendZoomMenuItems(Container) - Method in class PamView.zoomer.Zoomer
Add menu items associated with zooming into a pre-existing menu.
apply_cal(float[]) - Method in class d3.calibration.CalibrationInfo
Apply this calibration to an aarry of data.
apply_cal(float[], Double, Double) - Method in class d3.calibration.CalibrationInfo
Apply this calibration to an array of data.
applyHanningWindow(double[]) - Static method in class clickDetector.ClickDetection
apply a Hanning window to the passed dataset.
applyMask(double[], double[]) - Static method in class PamUtils.MatrixOps
 
applyMask(Complex[], double[]) - Static method in class PamUtils.MatrixOps
 
applyPropertyChange(PropertyChangeEvent, JLayer) - Method in class PamView.PamWaitAnimation
 
approx - Static variable in class gpl.dialog.GPLDialog
 
AquisitionGUIFX - Class in Acquisition.layoutFX
FX GUI for the SoundAquisition module.
AquisitionGUIFX(AcquisitionControl) - Constructor for class Acquisition.layoutFX.AquisitionGUIFX
 
AquisitionLoadPoint - Class in Acquisition.offlineFuncs
 
AquisitionLoadPoint(long, int) - Constructor for class Acquisition.offlineFuncs.AquisitionLoadPoint
 
arbFreqs - Variable in class Filters.FilterParams
 
arbGains - Variable in class Filters.FilterParams
 
arbPanel - Variable in class Filters.FilterDialogPanel
 
arbTableModel - Variable in class Filters.FilterDialogPanel
 
ArchiveModelClassifier - Class in rawDeepLearningClassifier.dlClassification.archiveModel
A Tensorflow or PyTorch model zipped with a PAMGuard settings file.
ArchiveModelClassifier(DLControl) - Constructor for class rawDeepLearningClassifier.dlClassification.archiveModel.ArchiveModelClassifier
 
ArchiveModelPane - Class in rawDeepLearningClassifier.dlClassification.archiveModel
 
ArchiveModelPane(ArchiveModelClassifier) - Constructor for class rawDeepLearningClassifier.dlClassification.archiveModel.ArchiveModelPane
 
ArchiveModelUI - Class in rawDeepLearningClassifier.dlClassification.archiveModel
 
ArchiveModelUI(ArchiveModelClassifier) - Constructor for class rawDeepLearningClassifier.dlClassification.archiveModel.ArchiveModelUI
SondSpot classifier.
ArchiveModelWorker - Class in rawDeepLearningClassifier.dlClassification.archiveModel
Runs a Ketos deep learning model and performs feature extraction.
ArchiveModelWorker() - Constructor for class rawDeepLearningClassifier.dlClassification.archiveModel.ArchiveModelWorker
SoundSpotWorker constructor.
area(double[][]) - Static method in class PamUtils.PamUtils
Calculate the area of a polygon
areConfigurationsWithErrors() - Method in class likelihoodDetectionModule.LikelihoodDetectionParameters
Are configurations with errors scans the TargetConfigurations that are currently configured and returns a boolean value indicating whether any of them have erroneous values or are inconsistent with current acquisition (audio data source) settings.
areFieldsSet() - Method in class rocca.RoccaClassifier
 
areSampleSettingsOk(int, float) - Method in class Acquisition.DaqSystem
 
areSampleSettingsOk(int, float) - Method in class asiojni.ASIOSoundSystem
 
areWeRunningAncCalcsOnClicks() - Method in class rocca.RoccaParameters
 
areWeRunningAncCalcsOnWhistles() - Method in class rocca.RoccaParameters
 
arrangeWindows() - Method in class clickDetector.ClickTabPanel
 
ArrangeWindows(Frame) - Constructor for class clickDetector.ClickTabPanelControl.ArrangeWindows
 
Array - package Array
 
ARRAY - Enum constant in enum class dataModelFX.connectionNodes.ModuleIconFactory.ModuleIcon
 
ARRAY_MANAGER - Static variable in class videoRangePanel.LocationManager
Goes through the array manager and determines a location of the 'boat'.
ARRAY_TYPE_LINE - Static variable in class Array.ArrayManager
Line array of two or more elements
ARRAY_TYPE_NONE - Static variable in class Array.ArrayManager
No array specified
ARRAY_TYPE_PLANE - Static variable in class Array.ArrayManager
Three or more Hydrophones all in the same plane
ARRAY_TYPE_POINT - Static variable in class Array.ArrayManager
Point array (single phone or multiple phones at same point)
ARRAY_TYPE_VOLUME - Static variable in class Array.ArrayManager
Four or more hydrophones not in the same plane.
Array.importHydrophoneData - package Array.importHydrophoneData
 
Array.layoutFX - package Array.layoutFX
 
Array.plot - package Array.plot
 
Array.sensors - package Array.sensors
 
Array.sensors.swing - package Array.sensors.swing
 
Array.streamerOrigin - package Array.streamerOrigin
 
Array.swing.sidepanel - package Array.swing.sidepanel
 
array2BitSet(boolean[]) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtMAT.MHTAlgorithmMAT
Convert a boolean array to a BitSet.
array2String(double[], int) - Static method in class PamUtils.PamArrayUtils
Convert an array to a comma delimited string.
array2String(double[], int, String) - Static method in class PamUtils.PamArrayUtils
Convert an array to a delimited string.
array2String(float[], int, String) - Static method in class PamUtils.PamArrayUtils
Convert an array to a delimited string.
array2String(Number[], int, String) - Static method in class PamUtils.PamArrayUtils
Convert an array to a delimited string.
Array3DPane - Class in Array.layoutFX
Create a 3D visualisation of the array.
Array3DPane() - Constructor for class Array.layoutFX.Array3DPane
 
ArrayAccelControl - Class in ArrayAccelerometer
 
ArrayAccelControl(String) - Constructor for class ArrayAccelerometer.ArrayAccelControl
 
ArrayAccelDataBlock - Class in ArrayAccelerometer
 
ArrayAccelDataBlock(String, ArrayAccelControl, ArrayAccelProcess) - Constructor for class ArrayAccelerometer.ArrayAccelDataBlock
 
ArrayAccelDataUnit - Class in ArrayAccelerometer
 
ArrayAccelDataUnit(long, ArrayAccelControl, Double[], Double[]) - Constructor for class ArrayAccelerometer.ArrayAccelDataUnit
 
ArrayAccelDialog - Class in ArrayAccelerometer
 
ArrayAccelerometer - package ArrayAccelerometer
 
ArrayAccelLogging - Class in ArrayAccelerometer
 
ArrayAccelLogging(ArrayAccelControl, PamDataBlock) - Constructor for class ArrayAccelerometer.ArrayAccelLogging
 
ArrayAccelPanel - Class in ArrayAccelerometer
 
ArrayAccelPanel(ArrayAccelControl) - Constructor for class ArrayAccelerometer.ArrayAccelPanel
 
ArrayAccelParams - Class in ArrayAccelerometer
 
ArrayAccelParams() - Constructor for class ArrayAccelerometer.ArrayAccelParams
 
ArrayAccelPlugin - Class in ArrayAccelerometer
 
ArrayAccelPlugin() - Constructor for class ArrayAccelerometer.ArrayAccelPlugin
 
ArrayAccelProcess - Class in ArrayAccelerometer
 
ArrayAccelProcess(ArrayAccelControl) - Constructor for class ArrayAccelerometer.ArrayAccelProcess
 
ArrayAccelSidePanel - Class in ArrayAccelerometer
 
ArrayAccelSidePanel(ArrayAccelControl) - Constructor for class ArrayAccelerometer.ArrayAccelSidePanel
 
arrayChanged(int, Object) - Method in interface Array.layoutFX.ArrayChangeListener
Called whenever a hydrophone or streamer changes.
ArrayChangeListener - Interface in Array.layoutFX
 
arrayDeserialized() - Method in class Array.PamArray
called just after the array settings have been loaded so that data can be loaded back into the Hydrophone localisers.
ArrayDialog - Class in Array
Main dialog for hydrophone array configuration
ArrayDimComponent - Class in Array.sensors.swing
 
ArrayDimComponent(int) - Constructor for class Array.sensors.swing.ArrayDimComponent
 
ArrayDimComponent(int, Integer, Integer) - Constructor for class Array.sensors.swing.ArrayDimComponent
 
ArrayDisplay - Class in Array.swing.sidepanel
Array display panel showing tilt, roll, etc.
ArrayDisplay() - Constructor for class Array.swing.sidepanel.ArrayDisplay
 
ArrayDisplayPanel - Class in Array.swing.sidepanel
 
ArrayDisplayPanel(ArrayDisplayParamsProvider) - Constructor for class Array.swing.sidepanel.ArrayDisplayPanel
 
ArrayDisplayParameters - Class in Array.sensors
Parameters for all of the three display - pitchroll, heading and depth
ArrayDisplayParameters() - Constructor for class Array.sensors.ArrayDisplayParameters
 
ArrayDisplayParamsDialog - Class in Array.sensors.swing
 
ArrayDisplayParamsProvider - Interface in Array.sensors
 
ArrayDump - Class in PamUtils
 
ArrayDump() - Constructor for class PamUtils.ArrayDump
 
ArrayGraphicDisplay - Class in Array.swing.sidepanel
 
ArrayGraphicDisplay(ArrayDisplayParamsProvider) - Constructor for class Array.swing.sidepanel.ArrayGraphicDisplay
 
ArrayGUIFX - Class in Array.layoutFX
JavaFX UI bits of the Array Manager.
ArrayGUIFX(ArrayManager) - Constructor for class Array.layoutFX.ArrayGUIFX
 
ArrayLineGraphs - Class in Array.swing.sidepanel
 
ArrayLineGraphs() - Constructor for class Array.swing.sidepanel.ArrayLineGraphs
 
ArrayManager - Class in Array
Manager for different array configurations.
arrayManagerType - Static variable in class Array.ArrayManager
The array manager.
ArrayNumberDisplay - Class in Array.swing.sidepanel
 
ArrayNumberDisplay(ArrayDisplayParamsProvider) - Constructor for class Array.swing.sidepanel.ArrayNumberDisplay
 
ArrayParameters - Class in Array
Parameters wrapper for array data.
ArrayParameters(ArrayList<PamArray>) - Constructor for class Array.ArrayParameters
 
ArrayParameterType - Enum Class in Array.sensors
Types of value which might occur in streamer data for height, head, pitch and roll where values can be fixed, default or from a sensor default not applicable to depth, 0 for pitch and roll, GPS head for heading
ArrayPlotProviderFX - Class in Array.plot
 
ArrayPlotProviderFX(StreamerDataBlock) - Constructor for class Array.plot.ArrayPlotProviderFX
 
ArrayReferenceSystem - Class in PamController.masterReference
 
ArrayReferenceSystem() - Constructor for class PamController.masterReference.ArrayReferenceSystem
 
ArraySensorComponent - Class in Array.sensors.swing
HPR on a user display.
ArraySensorComponent(ArraySensorPanelProvider, UserDisplayControl, String) - Constructor for class Array.sensors.swing.ArraySensorComponent
 
ArraySensorControl - Class in analogarraysensor
 
ArraySensorControl(String) - Constructor for class analogarraysensor.ArraySensorControl
 
ArraySensorDataBlock - Interface in Array.sensors
Label for a datablock that has sensor data.
ArraySensorDataUnit - Interface in Array.sensors
this is nominally an add on to data units, but we do also add it to GpsData so that GpsData and StremerDataUnits can both be passed to array graphics.
ArraySensorFieldType - Enum Class in Array.sensors
 
ArraySensorLogging - Class in analogarraysensor
 
ArraySensorLogging(ArraySensorControl, AnalogArraySensorDataBlock) - Constructor for class analogarraysensor.ArraySensorLogging
 
ArraySensorPanelProvider - Class in Array.sensors.swing
 
ArraySensorPanelProvider() - Constructor for class Array.sensors.swing.ArraySensorPanelProvider
 
ArraySensorParams - Class in analogarraysensor
 
ArraySensorParams() - Constructor for class analogarraysensor.ArraySensorParams
 
ArraySensorProcess - Class in analogarraysensor
 
ArraySensorProcess(ArraySensorControl) - Constructor for class analogarraysensor.ArraySensorProcess
 
ArraySettingsPane - Class in Array.layoutFX
The main settings pane for settings up a hydrophone array.
ArraySettingsPane() - Constructor for class Array.layoutFX.ArraySettingsPane
 
ArraySidePanel - Class in Array.swing.sidepanel
 
ArraySidePanel(ArrayDisplayParamsProvider) - Constructor for class Array.swing.sidepanel.ArraySidePanel
 
ArraySidePanelControl - Class in Array
 
ArraySidePanelControl(String) - Constructor for class Array.ArraySidePanelControl
 
ArrayTDDataInfo - Class in Array.plot
 
ArrayTDDataInfo(TDDataProviderFX, TDGraphFX, StreamerDataBlock) - Constructor for class Array.plot.ArrayTDDataInfo
 
arrayToMatrix(PamVector[]) - Static method in class pamMaths.PamVector
convert a series of vectors into a Matrix
arrEquals(double[], double[]) - Static method in class PamUtils.PamArrayUtils
Check if two double arrays contain the same elements
arrEquals(int[], int[]) - Static method in class PamUtils.PamArrayUtils
Check if two int arrays contain the same elements
arrEquals(long[], long[]) - Static method in class PamUtils.PamArrayUtils
Check if two long arrays contain the same elements
arrEquals(Long[], Long[]) - Static method in class PamUtils.PamArrayUtils
Check if two Long arrays contain the same elements
arrowLeft - Variable in class detectionPlotFX.DetectionGroupDisplay
Arrow to move data units
arrowRight - Variable in class detectionPlotFX.DetectionGroupDisplay
Arrow to move data units to the left.
arrowSize - Static variable in class PamView.PamObjectViewer
 
ASCII6 - Static variable in class NMEA.NMEABitArray
Lookup table to convert from integer to 6 bit ASCII data for AIS vessel names, destinations, etc.
Ascii6Bit - Class in PamUtils
Utilities for converting data to and from an Ascii 6 bit format.
Ascii6Bit(byte[]) - Constructor for class PamUtils.Ascii6Bit
 
Ascii6Bit(String, int) - Constructor for class PamUtils.Ascii6Bit
 
asioController - Variable in class asiojni.AsioJniInterface
 
AsioController() - Constructor for class asiojni.AsioJniInterface.AsioController
 
AsioDriverInfo - Class in asiojni
 
asioDriverInfos - Variable in class asiojni.AsioJniInterface
 
AsioDriverInfos - Class in asiojni
 
asioDriverSettings - Variable in class asiojni.AsioJniInterface
 
ASIOFilePlaybackSystem - Class in asiojni
 
ASIOFilePlaybackSystem(FilePlayback) - Constructor for class asiojni.ASIOFilePlaybackSystem
 
ASIOInterface - Class in asiojni
 
ASIOInterface() - Constructor for class asiojni.ASIOInterface
 
asiojni - package asiojni
 
asioJniInterface - Variable in class asiojni.AsioDriverInfos
 
AsioJniInterface - Class in asiojni
 
AsioJniInterface(ASIOSoundSystem) - Constructor for class asiojni.AsioJniInterface
 
AsioJniInterface.AsioController - Class in asiojni
 
AsioJniInterface.AsioDriverSettings - Class in asiojni
 
ASIOPlaybackDialogComponent - Class in soundPlayback.swing
This currently doens't seem to need to do anything.
ASIOPlaybackDialogComponent(ASIOSoundSystem, ASIOPlaybackSystem) - Constructor for class soundPlayback.swing.ASIOPlaybackDialogComponent
 
ASIOPlaybackSystem - Class in asiojni
 
ASIOPlaybackSystem(ASIOSoundSystem) - Constructor for class asiojni.ASIOPlaybackSystem
 
ASIOSoundSystem - Class in asiojni
Everything and everything to do with controlling and reading ASIO sound cards.
ASIOSoundSystem(AcquisitionControl) - Constructor for class asiojni.ASIOSoundSystem
 
asioStart() - Method in class asiojni.AsioJniInterface.AsioController
 
asioStop() - Method in class asiojni.AsioJniInterface.AsioController
 
assessDutyCycle() - Method in class tethys.deployment.RecordingList
Work out whether or not the data are evenly duty cycled by testing the distributions of on and off times.
assign(double, double) - Method in class fftManager.Complex
Assign new real and imaginary values to an existing Complex number
assign(Complex) - Method in class fftManager.Complex
Assign new real and imaginary values to an existing Complex number
assign(FilterParams) - Method in class Filters.FilterParams
 
assign(Coordinate3d) - Method in class PamUtils.Coordinate3d
 
assign(MapContourValues) - Method in class PamUtils.MapContourValues
 
assignClassification - Variable in class difar.DifarParameters
Spectrogram marks will be assigned the selected classification in sidebar
assignLabels - Variable in class quickAnnotation.QuickAnnotationParameters
 
AssociatedSignalBandEditor(Vector<String>) - Constructor for class likelihoodDetectionModule.TreeTable.AssociatedSignalBandEditor
Instantiates a new associated signal band editor.
associatedSignalBandIdentifier - Variable in class likelihoodDetectionModule.GuardBand
The identifier of the signal band that this guard band should be associated with.
asStringList() - Method in class fileOfflineData.OfflineFileList
Get a list of files in the catalog as a simple string list.
atmosphericPressure - Variable in class videoRangePanel.RefractionParameters
Atmospheric pressure in millibars.
attemptModuleDisconnect(ModuleConnectionNode, ModuleConnectionNode) - Method in class dataModelFX.DataModelPaneFX
Disconnect two modules.
attenuateWaveform(double[], double, double) - Method in interface propagation.AttenuationModel
Attenuate a waveform using a frequency dependent attenuation model for seawater.
attenuateWaveform(double[], double, double) - Method in class propagation.FrequencyAttenutationModel
 
attenuateWaveform(double[], double, double) - Method in class propagation.NullAttenuationModel
 
AttenuationModel - Interface in propagation
Attenuation model.
AttTest - Class in rocca
Generates a little ARFF file with different attribute types.
AttTest() - Constructor for class rocca.AttTest
 
audio_file - Variable in class rawDeepLearningClassifier.dlClassification.orcaSpot.OrcaSpotParams
Non user changeable
audio_file - Variable in class rawDeepLearningClassifier.dlClassification.orcaSpot.OrcaSpotParams2
Non user changeable
AudioDataQueue - Class in Acquisition
Better management of new data list.
AudioDataQueue() - Constructor for class Acquisition.AudioDataQueue
 
AudioFileFuncs - Class in Acquisition
 
AudioFileFuncs() - Constructor for class Acquisition.AudioFileFuncs
 
audioMoth - package audioMoth
 
AudioMothControl - Class in audioMoth
 
AudioMothControl(String, String) - Constructor for class audioMoth.AudioMothControl
 
AutecDataBlock - Class in autecPhones
 
AutecDataBlock(PamProcess) - Constructor for class autecPhones.AutecDataBlock
 
AutecDataUnit - Class in autecPhones
 
AutecDataUnit(double, double) - Constructor for class autecPhones.AutecDataUnit
 
AutecDataUnit(int, double, double, double, boolean) - Constructor for class autecPhones.AutecDataUnit
 
AutecGraphics - Class in autecPhones
 
AutecGraphics() - Constructor for class autecPhones.AutecGraphics
 
autecPhones - package autecPhones
 
AutecPhonesControl - Class in autecPhones
 
AutecPhonesControl(String) - Constructor for class autecPhones.AutecPhonesControl
 
AUTO_UPDATE_CANT - Static variable in class loggerForms.controls.LoggerControl
 
AUTO_UPDATE_FAIL - Static variable in class loggerForms.controls.LoggerControl
 
AUTO_UPDATE_SUCCESS - Static variable in class loggerForms.controls.LoggerControl
 
AUTOALERT - Enum constant in enum class loggerForms.PropertyTypes
 
AutoAlertPanel - Class in loggerForms.formdesign.propertypanels
 
AutoAlertPanel(FormEditor, PropertyTypes) - Constructor for class loggerForms.formdesign.propertypanels.AutoAlertPanel
 
autoAnnotate(PamDataUnit) - Method in class annotation.calcs.snr.SNRAnnotationType
 
autoAnnotate(PamDataUnit) - Method in class annotation.calcs.spl.SPLAnnotationType
 
autoAnnotate(PamDataUnit) - Method in class annotation.calcs.wav.WavAnnotationType
 
autoAnnotate(PamDataUnit) - Method in class annotation.DataAnnotationType
Automatically annotate the data unit with this annotation.
autoAnnotate(PamDataUnit) - Method in class annotation.localise.targetmotion.TMAnnotationType
 
Autoclear - Enum constant in enum class loggerForms.UDColName
 
autoDuration - Variable in class SoundRecorder.RecorderSettings
Duration of automatic recordings in seconds
autoEffortProvider() - Method in class Acquisition.DaqStatusDataBlock
 
autoEffortProvider() - Method in class PamguardMVC.PamDataBlock
Auto generate an effort provider.
autoEffortProvider() - Method in class PamguardMVC.PamRawDataBlock
 
AUTOEXIT - Static variable in class PamController.PamController
 
autoFixTable(DBControl, TableInformation, TableInformationMonitor) - Method in class generalDatabase.external.CopyManager
Attempt to create / automatically fix an output table
autoGenerate(Object) - Static method in class PamModel.parametermanager.PamParameterSet
Deprecated.
autoGenerate(Object, int) - Static method in class PamModel.parametermanager.PamParameterSet
Automatically generate a parameter set for a class.
autoGenerate(Object, PamParameterSet.ParameterSetType) - Static method in class PamModel.parametermanager.PamParameterSet
Automatically generate a parameter set for a class.
autoHide() - Method in class dataMap.DataStreamPanel
 
autoInterval - Variable in class SoundRecorder.RecorderSettings
Number of seconds between automatic recordings
AUTOMATIC - Enum constant in enum class PamguardMVC.DataAutomation
 
AUTOMATIC - Static variable in class Localiser.detectionGroupLocaliser.DetectionGroupLocaliser2
Flag to use whatever the abstract localiser has.
autoNewFiles - Variable in class binaryFileStorage.BinaryStoreSettings
 
autoNudgeScrollBar() - Method in class dataMap.ScrollingDataPanel
 
autoProcess - Variable in class difar.DifarParameters
whether to autoprocess vessel clips(now the only ones that can be)
AUTORECORD - Enum constant in enum class loggerForms.PropertyTypes
 
autoSaveAngleOnly - Variable in class difar.DifarParameters
when auto saving the difar result either the angle can be saved or the angle and range can be saved if it has range
autoSaveDResult - Variable in class difar.DifarParameters
 
autoSaveTime - Variable in class difar.DifarParameters
time afterwhich item has been sitting in difargram to autosave if no user interaction
autoScale - Variable in class dataPlots.layout.GraphParameters
 
autoScale - Variable in class dataPlotsFX.TDGraphParametersFX
Auto scale the axis.
autoScale - Variable in class dbht.DbHtDisplayParams
 
autoScale - Variable in class IshmaelDetector.IshDisplayParams
Indicates whether the Ishmael spectrogram plugin autoscales.
autoScale - Variable in class noiseMonitor.NoiseDisplaySettings
 
autoScale - Variable in class noiseOneBand.OneBandDisplayParams
 
autoScaleWaveform - Variable in class Spectrogram.SpectrogramParameters
 
autoSelect(int) - Method in class JSSHTerminal.TerminalEmulator
 
autoSetDataBlockMixMode() - Method in class PamguardMVC.PamDataBlock
 
autoSortPanes(int) - Method in class pamViewFX.PamGuiTabFX
Sort panes.
AUTOSTART - Static variable in class PamController.PamController
 
AutoTethysProvider - Class in tethys.pamdata
Automatically provides Tethys data for a PAMGuard datablock.
AutoTethysProvider(TethysControl, PamDataBlock) - Constructor for class tethys.pamdata.AutoTethysProvider
 
autoUpdate() - Method in class loggerForms.controls.LatLongControl
 
autoUpdate() - Method in class loggerForms.controls.LatLongTimeControl
 
autoUpdate() - Method in class loggerForms.controls.LoggerControl
Automatically update a control.
autoUpdate() - Method in class loggerForms.controls.NMEAControl
 
autoUpdate() - Method in class loggerForms.controls.TimeControl
 
autoUpdate() - Method in class loggerForms.controls.TimestampControl
 
AutoUpdate - Enum constant in enum class loggerForms.UDColName
 
AUXIN0 - Static variable in class mcc.mccjna.MCCConstants
 
AUXIN1 - Static variable in class mcc.mccjna.MCCConstants
 
AUXIN2 - Static variable in class mcc.mccjna.MCCConstants
 
AUXIN3 - Static variable in class mcc.mccjna.MCCConstants
 
AUXIN4 - Static variable in class mcc.mccjna.MCCConstants
 
AUXIN5 - Static variable in class mcc.mccjna.MCCConstants
 
AUXOUT0 - Static variable in class mcc.mccjna.MCCConstants
 
AUXOUT1 - Static variable in class mcc.mccjna.MCCConstants
 
AUXOUT2 - Static variable in class mcc.mccjna.MCCConstants
 
AUXPORT - Static variable in class mcc.mccjna.MCCConstants
 
AUXPORT0 - Static variable in class mcc.mccjna.MCCConstants
 
AUXPORT1 - Static variable in class mcc.mccjna.MCCConstants
 
AUXPORT2 - Static variable in class mcc.mccjna.MCCConstants
 
available() - Method in class binaryFileStorage.CountingInputStream
 
average() - Method in class likelihoodDetectionModule.linearAverageSpectra.RealBlockAverage
Returns the processed average data.
averageAngleAngleData(List<BeamOGramDataUnit>) - Static method in class beamformer.continuous.BeamOGramDataUnit
Average a list of beamogram data units over time , collapsing Frequency and also transposing so that angle1 is on x and angle2 on y.
averageChains(ArrayList<MCMC.ChainResult>) - Method in class Localiser.algorithms.genericLocaliser.MCMC.MCMC
Take different MCMC chains and average the results.
averageChains(ArrayList<MCMCTDResults>) - Method in class Localiser.algorithms.genericLocaliser.MCMC.old.MCMCLocaliser
Deprecated.
 
AveragedSpectraDataUnit - Class in likelihoodDetectionModule.linearAverageSpectra
This is the data type produced by the linearAverageSpectra
AveragedSpectraDataUnit(long, int, long, long) - Constructor for class likelihoodDetectionModule.linearAverageSpectra.AveragedSpectraDataUnit
 
averageFrequencyAngle1Data(List<BeamOGramDataUnit>) - Static method in class beamformer.continuous.BeamOGramDataUnit
Average a list of beamogram data units over time , collapsing Angle2 and also transposing so that angle1 is on x and frequency on y.
averageReady() - Method in class likelihoodDetectionModule.linearAverageSpectra.RealBlockAverage
 
averageStartSample() - Method in class likelihoodDetectionModule.linearAverageSpectra.RealBlockAverage
 
AverageSubtraction - Class in spectrogramNoiseReduction.averageSubtraction
 
AverageSubtraction() - Constructor for class spectrogramNoiseReduction.averageSubtraction.AverageSubtraction
 
AverageSubtractionDialogBits - Class in spectrogramNoiseReduction.averageSubtraction
 
AverageSubtractionDialogBits(AverageSubtraction) - Constructor for class spectrogramNoiseReduction.averageSubtraction.AverageSubtractionDialogBits
 
AverageSubtractionNodeFX - Class in spectrogramNoiseReduction.averageSubtraction
 
AverageSubtractionNodeFX(AverageSubtraction) - Constructor for class spectrogramNoiseReduction.averageSubtraction.AverageSubtractionNodeFX
 
AverageSubtractionParameters - Class in spectrogramNoiseReduction.averageSubtraction
 
AverageSubtractionParameters() - Constructor for class spectrogramNoiseReduction.averageSubtraction.AverageSubtractionParameters
 
averageTimestamp() - Method in class likelihoodDetectionModule.linearAverageSpectra.RealBlockAverage
 
averageWaveform - Variable in class clickTrainDetector.CTDataUnit
The average waveform.
averageWaveform() - Method in class clickTrainDetector.CTDataUnit
 
AverageWaveform - Class in PamUtils.avrgwaveform
Create average waveform and FFT spectrum.
AverageWaveform() - Constructor for class PamUtils.avrgwaveform.AverageWaveform
 
awtColorToFx(Color) - Static method in class pamViewFX.fxNodes.PamColorsFX
 
awtMenuItemToFX(MenuItem) - Static method in class pamViewFX.fxNodes.utilsFX.PamUtilsFX
Convert an AWT menu item into an FX menu Item.
AWTScheduler - Class in PamController
Class to schedule SwingWorker tasks so that they execute one at a time.
awtToFXColor(Color) - Static method in class pamViewFX.fxNodes.utilsFX.PamUtilsFX
 
AXIS - Enum constant in enum class PamView.PamColors.PamColor
 
AXIS - Enum constant in enum class pamViewFX.fxNodes.PamColorsFX.PamColor
 
AXIS_SIZE - Static variable in class rocca.RoccaSpecPopUp
 
AxisPane - Class in dataPlotsFX.layout
Deprecated.
AxisPane(PamAxisFX) - Constructor for class dataPlotsFX.layout.AxisPane
Deprecated.
 
Azigram - package Azigram
 
AzigramControl - Class in Azigram
Module that implements the Azigram algorithm from Thode et al 2019 J.
AzigramControl(String) - Constructor for class Azigram.AzigramControl
 
AzigramDataUnit - Class in Azigram
Just a dirty hack for testing.
AzigramDataUnit(long, int, long, long, ComplexArray, int) - Constructor for class Azigram.AzigramDataUnit
 
AzigramDisplayDialog - Class in Azigram
 
AzigramDisplayDialog(Window, AzigramControl) - Constructor for class Azigram.AzigramDisplayDialog
 
AzigramParameters - Class in Azigram
 
AzigramParameters() - Constructor for class Azigram.AzigramParameters
 
AzigramPlugin - Class in Azigram
Module that implements the Azigram algorithm from Thode et al 2019 J.
AzigramPlugin() - Constructor for class Azigram.AzigramPlugin
 
AzigramProcess - Class in Azigram
Azigram process will take FFT data from a DIFAR sonobuoy source, demux, and then compute Azigram (Thode et al 2019 JASA).
AzigramProcess(PamControlledUnit, FFTDataBlock) - Constructor for class Azigram.AzigramProcess
 

B

B - Enum constant in enum class AIS.StationType
 
BACK - Enum constant in enum class targetMotionModule.TargetMotionLocaliser.Interractive
 
BACK - Enum constant in enum class targetMotionOld.TargetMotionLocaliser.Interractive
 
backButtonProperty() - Method in class pamViewFX.fxNodes.flipPane.PamFlipPane
The back button property.
backCol - Static variable in class videoRangePanel.layoutAWT.VRMetaDataPanel
 
BACKGROUND - Enum constant in enum class PamguardMVC.blockprocess.BlockState
 
BACKGROUND - Static variable in class mcc.mccjna.MCCConstants
 
BACKGROUND_ALPHA - Enum constant in enum class PamView.PamColors.PamColor
 
BACKGROUND_ALPHA - Enum constant in enum class pamViewFX.fxNodes.PamColorsFX.PamColor
 
BACKGROUND_DATA - Static variable in class binaryFileStorage.BinaryTypes
 
backgroundAlpha - Variable in class likelihoodDetectionModule.normalizer.DecayingAverageNormAlphas
 
BackgroundBinaryWriter<Tunit extends BackgroundDataUnit> - Class in PamguardMVC.background
 
BackgroundBinaryWriter(BackgroundManager<Tunit>) - Constructor for class PamguardMVC.background.BackgroundBinaryWriter
 
backgroundConst - Variable in class RightWhaleEdgeDetector.RWEParameters
 
BackgroundDataBlock<Tunit extends BackgroundDataUnit> - Class in PamguardMVC.background
 
BackgroundDataBlock(Class, BackgroundManager<Tunit>) - Constructor for class PamguardMVC.background.BackgroundDataBlock
 
BackgroundDataUnit - Class in PamguardMVC.background
 
BackgroundDataUnit(long) - Constructor for class PamguardMVC.background.BackgroundDataUnit
 
BackgroundDataUnit(long, int, double) - Constructor for class PamguardMVC.background.BackgroundDataUnit
 
BackgroundDataUnit(DataUnitBaseData) - Constructor for class PamguardMVC.background.BackgroundDataUnit
 
backgroundIntervalMillis - Variable in class clickDetector.ClickParameters
Interval for storing background measurements.
BackgroundManager<Tunit extends BackgroundDataUnit> - Class in PamguardMVC.background
Trying to standardise measures of background noise for detectors.
BackgroundManager(PamProcess, PamDataBlock) - Constructor for class PamguardMVC.background.BackgroundManager
 
backgroundNoise - Variable in class simulatedAcquisition.SimParameters
 
backgroundSeconds - Variable in class likelihoodDetectionModule.GuardBand
The background seconds.
backgroundSeconds - Variable in class likelihoodDetectionModule.SignalBand
The background seconds.
backgroundTimeConstant - Variable in class likelihoodDetectionModule.normalizer.NormalizerProcessTimeConstants
 
backgroundTimeSecs - Variable in class gpl.GPLParameters
Time constant for background whitener and also for blocking of data.
backgroundWidth - Variable in class likelihoodDetectionModule.normalizer.SplitWindowNormWidths
 
BackgroundWorker() - Constructor for class PamUtils.worker.PamWorker.BackgroundWorker
 
BackupAction - Class in backupmanager.action
 
BackupAction(ActionMaker, BackupStream) - Constructor for class backupmanager.action.BackupAction
 
BackupActionPanel - Class in backupmanager.swing
 
BackupActionPanel(BackupControlPanel, BackupStream, BackupAction, JPanel, GridBagConstraints) - Constructor for class backupmanager.swing.BackupActionPanel
 
BackupCatalog - Class in backupmanager.database
Catalogue data that are already backed up.
BackupCatalog(BackupStream, String) - Constructor for class backupmanager.database.BackupCatalog
 
backupComplete() - Method in class backupmanager.database.BackupCatalog
Called when backup of a stream is complete so that catalogue can be closed.
backupComplete() - Method in class backupmanager.database.DatabaseCatalog
 
backupComplete() - Method in class backupmanager.stream.BackupStream
Called when backup of a stream is complete so that catalogue can be closed, etc.
backupComplete() - Method in class backupmanager.stream.FileBackupStream
 
BackupControlPanel - Class in backupmanager.swing
Main panel for handling, configuring and displaying backup progress.
BackupControlPanel(Window, BackupManager) - Constructor for class backupmanager.swing.BackupControlPanel
 
BackupDisplayComponent - Class in backupmanager.swing
 
BackupDisplayComponent(BackupManager) - Constructor for class backupmanager.swing.BackupDisplayComponent
 
BackupDisplayProvider - Class in backupmanager.swing
 
BackupDisplayProvider(BackupManager) - Constructor for class backupmanager.swing.BackupDisplayProvider
 
BackupException - Exception Class in backupmanager.action
Exception thrown when a backup operation fails.
BackupException(String) - Constructor for exception class backupmanager.action.BackupException
 
BackupFilter - Class in backupmanager.filter
 
BackupFilter(BackupAction, String) - Constructor for class backupmanager.filter.BackupFilter
 
BackupFilterParams - Interface in backupmanager.filter
 
BackupFunction - Interface in backupmanager
Base interface for all BackupStream, BackupAction and BackupDecision items to facilitate dialog creation and display.
BackupInformation - Class in backupmanager
Class that can be returned by a PAMControlled unit which gives backup information which is mostly a list of BackupStream objects (or just one of, but some modules may have multiple streams which do not necessarily relate directly to the datablocks.
BackupInformation() - Constructor for class backupmanager.BackupInformation
 
BackupInformation(BackupStream) - Constructor for class backupmanager.BackupInformation
 
backupmanager - package backupmanager
 
BackupManager - Class in backupmanager
PAMGuard module to automatically back up files.
BackupManager(String) - Constructor for class backupmanager.BackupManager
 
backupmanager.action - package backupmanager.action
 
backupmanager.bespoke - package backupmanager.bespoke
 
backupmanager.database - package backupmanager.database
 
backupmanager.filter - package backupmanager.filter
 
backupmanager.filter.alarm - package backupmanager.filter.alarm
 
backupmanager.schedule - package backupmanager.schedule
 
backupmanager.settings - package backupmanager.settings
 
backupmanager.stream - package backupmanager.stream
 
backupmanager.swing - package backupmanager.swing
 
BackupModulePanel - Class in backupmanager.swing
 
BackupModulePanel() - Constructor for class backupmanager.swing.BackupModulePanel
 
BackupObserver - Interface in backupmanager
Observers of backup progress.
BackupParams - Class in backupmanager
 
BackupParams() - Constructor for class backupmanager.BackupParams
 
BackupProcess - Class in backupmanager
 
BackupProcess(BackupManager) - Constructor for class backupmanager.BackupProcess
 
BackupProgress - Class in backupmanager
Class to send progress data to backup observers.
BackupProgress(BackupStream, BackupAction, BackupProgress.STATE) - Constructor for class backupmanager.BackupProgress
Bckup progress.
BackupProgress(BackupStream, BackupAction, BackupProgress.STATE, int, int, String) - Constructor for class backupmanager.BackupProgress
Bckup progress.
BackupProgress.STATE - Enum Class in backupmanager
 
BackupResult - Class in backupmanager.schedule
 
BackupResult(Integer, String, Long, Long, BackupResult.RESULT, String) - Constructor for class backupmanager.schedule.BackupResult
 
BackupResult(String, Long) - Constructor for class backupmanager.schedule.BackupResult
 
BackupResult.RESULT - Enum Class in backupmanager.schedule
 
BackupSchedule - Class in backupmanager.schedule
 
BackupSchedule(BackupManager) - Constructor for class backupmanager.schedule.BackupSchedule
 
BackupSettings - Class in backupmanager.settings
 
BackupSettings() - Constructor for class backupmanager.settings.BackupSettings
 
BackupStream - Class in backupmanager.stream
This is the central management class for each datastream that's going to get automatically backed up.
BackupStream(SettingsNameProvider, String) - Constructor for class backupmanager.stream.BackupStream
 
BackupStreamPanel - Class in backupmanager.swing
 
BackupStreamPanel(Window, BackupControlPanel, BackupStream) - Constructor for class backupmanager.swing.BackupStreamPanel
 
BAD_CTRL_REG - Static variable in class mcc.mccjna.MCCConstants
 
BAD_MEM_HANDLE - Static variable in class mcc.mccjna.MCCConstants
 
BAD_OUTP_REG - Static variable in class mcc.mccjna.MCCConstants
 
BAD_PCI_INDEX - Static variable in class mcc.mccjna.MCCConstants
 
BAD_RDBK_REG - Static variable in class mcc.mccjna.MCCConstants
 
BAD_RTD_CONVERSION - Static variable in class mcc.mccjna.MCCConstants
 
BADADCHAN - Static variable in class mcc.mccjna.MCCConstants
 
BADAIMODE - Static variable in class mcc.mccjna.MCCConstants
 
BADBCDFLAG - Static variable in class mcc.mccjna.MCCConstants
 
BADBITNUMBER - Static variable in class mcc.mccjna.MCCConstants
 
BADBOARD - Static variable in class mcc.mccjna.MCCConstants
 
BADBOARDTYPE - Static variable in class mcc.mccjna.MCCConstants
 
BADBRIDGETYPE - Static variable in class mcc.mccjna.MCCConstants
 
BADBUFFERSIZE - Static variable in class mcc.mccjna.MCCConstants
 
BADBURSTIOCOUNT - Static variable in class mcc.mccjna.MCCConstants
 
BADCALFACTORS - Static variable in class mcc.mccjna.MCCConstants
 
BADCALLBACKFUNC - Static variable in class mcc.mccjna.MCCConstants
 
BADCHANTYPE - Static variable in class mcc.mccjna.MCCConstants
 
BADCHIPNUM - Static variable in class mcc.mccjna.MCCConstants
 
BADCNTRCONFIG - Static variable in class mcc.mccjna.MCCConstants
 
BADCOMPARE - Static variable in class mcc.mccjna.MCCConstants
 
BADCONFIGITEM - Static variable in class mcc.mccjna.MCCConstants
 
BADCONFIGTYPE - Static variable in class mcc.mccjna.MCCConstants
 
BADCONNECTION - Static variable in class mcc.mccjna.MCCConstants
 
BADCOUNT - Static variable in class mcc.mccjna.MCCConstants
 
BADCOUNTERDEVNUM - Static variable in class mcc.mccjna.MCCConstants
 
BADCOUNTEREDGE - Static variable in class mcc.mccjna.MCCConstants
 
BADCOUNTERMODE - Static variable in class mcc.mccjna.MCCConstants
 
BADCOUNTMODE - Static variable in class mcc.mccjna.MCCConstants
 
BADCTRCONTROL - Static variable in class mcc.mccjna.MCCConstants
 
BADCTRREG - Static variable in class mcc.mccjna.MCCConstants
 
BADDACHAN - Static variable in class mcc.mccjna.MCCConstants
 
BADDADEVNUM - Static variable in class mcc.mccjna.MCCConstants
 
BADDAVAL - Static variable in class mcc.mccjna.MCCConstants
 
BADDEBOUNCETIME - Static variable in class mcc.mccjna.MCCConstants
 
BADDEBOUNCETRIGMODE - Static variable in class mcc.mccjna.MCCConstants
 
BADDIRECTION - Static variable in class mcc.mccjna.MCCConstants
 
BADDIVIDER - Static variable in class mcc.mccjna.MCCConstants
 
BADDUTYCYCLE - Static variable in class mcc.mccjna.MCCConstants
 
BADENCODING - Static variable in class mcc.mccjna.MCCConstants
 
BADERRCODE - Static variable in class mcc.mccjna.MCCConstants
 
BADEUADD - Static variable in class mcc.mccjna.MCCConstants
 
BADEVENTPARAM - Static variable in class mcc.mccjna.MCCConstants
 
BADEVENTSIZE - Static variable in class mcc.mccjna.MCCConstants
 
BADEVENTTYPE - Static variable in class mcc.mccjna.MCCConstants
 
BADEXCITATION - Static variable in class mcc.mccjna.MCCConstants
 
BADEXPCHAN - Static variable in class mcc.mccjna.MCCConstants
 
BADFILENAME - Static variable in class mcc.mccjna.MCCConstants
 
BADFILENUMBER - Static variable in class mcc.mccjna.MCCConstants
 
BADFIRSTPOINT - Static variable in class mcc.mccjna.MCCConstants
 
BADFLAGPINS - Static variable in class mcc.mccjna.MCCConstants
 
BADFREQUENCY - Static variable in class mcc.mccjna.MCCConstants
 
BADGATECNTRL - Static variable in class mcc.mccjna.MCCConstants
 
BADGATEINTERVAL - Static variable in class mcc.mccjna.MCCConstants
 
BADINDEX - Static variable in class mcc.mccjna.MCCConstants
 
BADINDEXMODE - Static variable in class mcc.mccjna.MCCConstants
 
BADINITIALDELAY - Static variable in class mcc.mccjna.MCCConstants
 
BADINT - Static variable in class mcc.mccjna.MCCConstants
 
BADINVERTINDEX - Static variable in class mcc.mccjna.MCCConstants
 
BADLOADVAL - Static variable in class mcc.mccjna.MCCConstants
 
BADMAPPEDCOUNTER - Static variable in class mcc.mccjna.MCCConstants
 
BADMEMMODE - Static variable in class mcc.mccjna.MCCConstants
 
BADOPTION - Static variable in class mcc.mccjna.MCCConstants
 
BADOUTCONTROL - Static variable in class mcc.mccjna.MCCConstants
 
BADPCMSLOTREF - Static variable in class mcc.mccjna.MCCConstants
 
BADPOINTER - Static variable in class mcc.mccjna.MCCConstants
 
BADPORTCONFIG - Static variable in class mcc.mccjna.MCCConstants
 
BADPORTNUM - Static variable in class mcc.mccjna.MCCConstants
 
BADPRETRIGCOUNT - Static variable in class mcc.mccjna.MCCConstants
 
BADQUADRATURE - Static variable in class mcc.mccjna.MCCConstants
 
BADRANGE - Static variable in class mcc.mccjna.MCCConstants
 
BADRATE - Static variable in class mcc.mccjna.MCCConstants
 
BADRECYCLEFLAG - Static variable in class mcc.mccjna.MCCConstants
 
BADRELOAD - Static variable in class mcc.mccjna.MCCConstants
 
BADSAMPLEMODE - Static variable in class mcc.mccjna.MCCConstants
 
BADSENSORTYPE - Static variable in class mcc.mccjna.MCCConstants
 
BADSIGNAL - Static variable in class mcc.mccjna.MCCConstants
 
BADSOURCE - Static variable in class mcc.mccjna.MCCConstants
 
BADSPCLGATE - Static variable in class mcc.mccjna.MCCConstants
 
BADTCCHANMODE - Static variable in class mcc.mccjna.MCCConstants
 
BADTEMPSCALE - Static variable in class mcc.mccjna.MCCConstants
 
BADTICKSIZE - Static variable in class mcc.mccjna.MCCConstants
 
BADTIMEOFDAY - Static variable in class mcc.mccjna.MCCConstants
 
BADTRIGCHAN - Static variable in class mcc.mccjna.MCCConstants
 
BADTRIGEVENT - Static variable in class mcc.mccjna.MCCConstants
 
BADTRIGLEVEL - Static variable in class mcc.mccjna.MCCConstants
 
BADTRIGSENSE - Static variable in class mcc.mccjna.MCCConstants
 
BADTRIGTHRESHOLD - Static variable in class mcc.mccjna.MCCConstants
 
BADTRIGTYPE - Static variable in class mcc.mccjna.MCCConstants
 
BADTRIGVALUE - Static variable in class mcc.mccjna.MCCConstants
 
BAND_ENERGY - Static variable in class noiseMonitor.NoiseDisplaySettings
 
band1Energy - Variable in class clickDetector.ClickTypeParams
 
band1Freq - Variable in class clickDetector.ClickTypeParams
 
band2Energy - Variable in class clickDetector.ClickTypeParams
 
band2Freq - Variable in class clickDetector.ClickTypeParams
 
BandAnalyser - Class in noiseBandMonitor
Class to assess the performance of a bank of filters and decimators.
BandAnalyser(NoiseBandControl, double, NoiseBandSettings) - Constructor for class noiseBandMonitor.BandAnalyser
 
bandChanged() - Method in class noiseMonitor.NoiseTabPanel
 
BandData - Class in noiseBandMonitor
Class to create a set of octave or third octave bands using base-two exact steps according to the standard ANSI S1.11-2004.
bandEnergyDifference - Variable in class clickDetector.ClickTypeParams
 
bandIndex() - Method in class likelihoodDetectionModule.thresholdDetector.DetectionKey
 
bandIndex() - Method in class likelihoodDetectionModule.thresholdDetector.TestConsumer.EventInfo
 
bandOption - Variable in class noiseMonitor.NoiseDisplaySettings
Band option - 0 = band energy, 1 = convert to spectrum level.
BANDPASS - Enum constant in enum class Filters.FilterBand
 
BandPerformance - Class in noiseBandMonitor
Contains data on the performance of a single filter band.
BandPerformance(int, double[], FilterMethod) - Constructor for class noiseBandMonitor.BandPerformance
 
BANDSTOP - Enum constant in enum class Filters.FilterBand
 
bandType - Variable in class noiseBandMonitor.NoiseBandSettings
 
BandType - Enum Class in noiseBandMonitor
 
BANDWIDTH - Enum constant in enum class PamView.GeneralProjector.ParameterType
 
bartlett(int) - Static method in class Spectrogram.WindowFunction
 
BARTLETT - Enum constant in enum class difar.DifarParameters.DifarOutputTypes
 
BARTLETT - Static variable in class Spectrogram.WindowFunction
 
BASE_CANVAS - Static variable in class dataPlotsFX.layout.TDGraphFX.TDPlotPane
Repaint the back canvas.
BASE_PRIORITY - Static variable in class dataPlotsFX.data.TDScaleInfo
Override other nPlots and display number of panels
Base3xWhitener - Class in gpl.whiten
Whitens data in time using the methods provided by Gerald d'Spain and used in Tyler Helbles paper.
Base3xWhitener(int, double, int, int) - Constructor for class gpl.whiten.Base3xWhitener
 
BaseAccessSystem - Class in generalDatabase
 
BaseAccessSystem() - Constructor for class generalDatabase.BaseAccessSystem
 
BaseClassificationAnnotation - Class in annotation.classifier
 
BaseClassificationAnnotation(BaseClassificationAnnotationType, double, String, String) - Constructor for class annotation.classifier.BaseClassificationAnnotation
 
BaseClassificationAnnotationType - Class in annotation.classifier
 
BaseClassificationAnnotationType(String) - Constructor for class annotation.classifier.BaseClassificationAnnotationType
 
BaseClassificationBinary - Class in annotation.classifier
 
BaseClassificationBinary(BaseClassificationAnnotationType) - Constructor for class annotation.classifier.BaseClassificationBinary
 
BaseClassSymbolModifier - Class in annotation.classifier
 
BaseClassSymbolModifier(DataAnnotationType, String, PamSymbolChooser) - Constructor for class annotation.classifier.BaseClassSymbolModifier
 
BaseFFTBearingAlgorithm - Class in bearinglocaliser.algorithms
 
BaseFFTBearingAlgorithm(BearingProcess, BearingAlgorithmParams, int) - Constructor for class bearinglocaliser.algorithms.BaseFFTBearingAlgorithm
 
BaseProcessCheck - Class in PamController.status
Basic checks of one or more processes in a module.
BaseProcessCheck(PamProcess, Class, double, double) - Constructor for class PamController.status.BaseProcessCheck
Class to check a PAMProcess is doing it's stuff
BaseProcessCheck.IOCounter - Class in PamController.status
 
BasePropertySet - Class in loggerForms.formdesign.controlpropsets
Property set for all
BasePropertySet(FormDescription, ControlTitle) - Constructor for class loggerForms.formdesign.controlpropsets.BasePropertySet
 
BASESTATION - Enum constant in enum class AIS.StationType
 
BasicClickIdentifier - Class in clickDetector.ClickClassifiers.basic
 
BasicClickIdentifier(ClickControl) - Constructor for class clickDetector.ClickClassifiers.basic.BasicClickIdentifier
 
BasicClickIdParameters - Class in clickDetector
 
BasicClickIdParameters() - Constructor for class clickDetector.BasicClickIdParameters
 
BasicFragmentStore - Class in whistleClassifier
 
BasicFragmentStore(float) - Constructor for class whistleClassifier.BasicFragmentStore
 
BasicFreqDomBeam - Class in beamformer.algorithms.basicFreqDomain
 
BasicFreqDomBeam(BasicFreqDomBeamFormer, int, int, PamVector, PamVector[], int[], double[], double[], double) - Constructor for class beamformer.algorithms.basicFreqDomain.BasicFreqDomBeam
Main Constructor.
BasicFreqDomBeamFormer - Class in beamformer.algorithms.basicFreqDomain
A basic frequency-domain beamformer
BasicFreqDomBeamFormer(BasicFreqDomBeamProvider, BeamFormerBaseProcess, BasicFreqDomParams, int, int) - Constructor for class beamformer.algorithms.basicFreqDomain.BasicFreqDomBeamFormer
 
BasicFreqDomBeamogramPane - Class in beamformer.algorithms.basicFreqDomain
 
BasicFreqDomBeamogramPane(Object) - Constructor for class beamformer.algorithms.basicFreqDomain.BasicFreqDomBeamogramPane
 
BasicFreqDomBeamProvider - Class in beamformer.algorithms.basicFreqDomain
 
BasicFreqDomBeamProvider(BeamFormerBaseControl) - Constructor for class beamformer.algorithms.basicFreqDomain.BasicFreqDomBeamProvider
Main Constructor
BasicFreqDomParams - Class in beamformer.algorithms.basicFreqDomain
 
BasicFreqDomParams(String, int, int) - Constructor for class beamformer.algorithms.basicFreqDomain.BasicFreqDomParams
Main constructor
BasicFreqDomParamsPane2 - Class in beamformer.algorithms.basicFreqDomain
Dialog for the basic frequency domain beam former parameters
BasicFreqDomParamsPane2(Object, BeamFormerBaseControl) - Constructor for class beamformer.algorithms.basicFreqDomain.BasicFreqDomParamsPane2
 
BasicIdentifierPaneFX - Class in clickDetector.layoutFX.clickClassifiers
Pane for the basic click classifier.
BasicIdentifierPaneFX(ClickIdentifier, ClickControl) - Constructor for class clickDetector.layoutFX.clickClassifiers.BasicIdentifierPaneFX
Create a BasicClickIdParameters pane which allows users to add multiple basic click identifiers to the PAMGuard click classifier.
BasicIdentifierPanel - Class in clickDetector.ClickClassifiers.basic
 
BasicIdentifierPanel(BasicClickIdentifier, Frame, ClickControl) - Constructor for class clickDetector.ClickClassifiers.basic.BasicIdentifierPanel
 
BasicKeyItem - Class in PamView
 
BasicKeyItem() - Constructor for class PamView.BasicKeyItem
 
BasicKeyItem(Component, String) - Constructor for class PamView.BasicKeyItem
 
BasicKeyItem(Icon, String) - Constructor for class PamView.BasicKeyItem
 
BasicMarkDataSelector - Class in PamView.paneloverlay.overlaymark
 
BasicMarkDataSelector(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Constructor for class PamView.paneloverlay.overlaymark.BasicMarkDataSelector
 
BasicPDProvider - Class in whistleDetector
 
BasicPDProvider() - Constructor for class whistleDetector.BasicPDProvider
 
BasicPeakDetector - Class in whistleDetector
 
BasicPeakDetector(WhistleControl, WhistleDetector, FFTDataBlock, int) - Constructor for class whistleDetector.BasicPeakDetector
 
BasicSidebarLayout - Class in soundPlayback.swing
Simple layout for side bar components.
BasicStreamItem - Class in backupmanager.stream
 
BasicStreamItem(long, String, Long, Long, Long) - Constructor for class backupmanager.stream.BasicStreamItem
 
BAT - Enum constant in enum class rawDeepLearningClassifier.layoutFX.exampleSounds.ExampleSoundFactory.ExampleSoundCategory
 
BAT_CALL - Enum constant in enum class rawDeepLearningClassifier.layoutFX.exampleSounds.ExampleSoundFactory.ExampleSoundType
 
BatchCommand - Class in PamController.command
 
BatchCommand(CommandManager) - Constructor for class PamController.command.BatchCommand
 
batchConvertClickDatabase(Frame) - Method in class clickDetector.ClickControl
 
BATCHFLAG - Static variable in class pamguard.GlobalArguments
Put some common flags here for convenience.
batchProcessingComplete() - Method in class PamController.PamController
 
BatchRainbowFileConversion - Class in clickDetector.offlineFuncs.rcImport
 
BatchResultSet - Class in whistleClassifier.training
Container for batch processing results
BatchResultSet(int, int, double, Matrix, Matrix) - Constructor for class whistleClassifier.training.BatchResultSet
 
BatchStatusCommand - Class in PamController.command
Command to get PAMGuard to send back the batch processing status.
BatchStatusCommand() - Constructor for class PamController.command.BatchStatusCommand
 
BatchTMLocalisation - Class in targetMotionModule.offline
 
BatchTMLocalisation(TargetMotionControl) - Constructor for class targetMotionModule.offline.BatchTMLocalisation
 
BatchTrainingDialog - Class in whistleClassifier.training
 
BatchTrainingDialog(Window, ClassifierTrainingDialog, FragmentClassifierParams) - Constructor for class whistleClassifier.training.BatchTrainingDialog
 
BatchTrainingMonitor - Interface in whistleClassifier.training
 
BatchTrainingParams - Class in whistleClassifier.training
 
BatchTrainingParams() - Constructor for class whistleClassifier.training.BatchTrainingParams
 
BatchTrainingProgress - Class in whistleClassifier.training
 
BatchTrainingProgress(int, boolean) - Constructor for class whistleClassifier.training.BatchTrainingProgress
 
BatchTrainingProgress(long) - Constructor for class whistleClassifier.training.BatchTrainingProgress
 
BatchTrainingProgress(String) - Constructor for class whistleClassifier.training.BatchTrainingProgress
 
BatchTrainingWorker - Class in whistleClassifier.training
 
BatchTrainingWorker(ClassifierTrainingDialog, BatchTrainingParams, BatchTrainingMonitor) - Constructor for class whistleClassifier.training.BatchTrainingWorker
 
BatchViewSettingsImport - Class in PamController.settings
A set of functions to handle importing and overriding settings imported from a psfx during batch mode processing in viewer mode.
BatchViewSettingsImport(PamController, PamSettingsGroup) - Constructor for class PamController.settings.BatchViewSettingsImport
 
batPyTorchTest() - Static method in class rawDeepLearningClassifier.dlClassification.genericModel.GenericModelTest
The bat Pytorch test.
BatterySwitchLevel - Variable in class cpod.FPODReader.FPODHeader
 
BBDialogPanel - Class in analoginput.brainboxes.swing
 
BBDialogPanel(BrainBoxDevices, AnalogSensorUser) - Constructor for class analoginput.brainboxes.swing.BBDialogPanel
 
BBED549 - Class in modbustcp.brainbox
 
BBED549(String) - Constructor for class modbustcp.brainbox.BBED549
Create a Modbus TCP connnection to the BainBoxes ED-549
BCD_ENCODING - Static variable in class mcc.mccjna.MCCConstants
 
BCLDetectionChunk - Class in soundtrap.sud
 
BCLDetectionChunk(long, long, boolean, String, Chunk) - Constructor for class soundtrap.sud.BCLDetectionChunk
 
bclFileEnd - Static variable in class soundtrap.STToolsControl
 
BCLLine - Class in soundtrap
Unpacked contents of a line of BCL data.
BCLReader - Class in soundtrap
Reader for BCL files.
BCLReader(File) - Constructor for class soundtrap.BCLReader
 
BEAKED_WHALE - Enum constant in enum class clickTrainDetector.classification.templateClassifier.DefualtSpectrumTemplates.SpectrumTemplateType
 
BEAKED_WHALE - Enum constant in enum class rawDeepLearningClassifier.layoutFX.exampleSounds.ExampleSoundFactory.ExampleSoundType
 
beakedWhale1 - Static variable in class matchedTemplateClassifer.DefaultTemplates
Beaked whale click template, sR is 192000;
beakedWhale1 - Static variable in class rawDeepLearningClassifier.layoutFX.exampleSounds.ExampleSoundFactory
Beaked whale click template, sR is 192000;
BeakedWhaleCluster - Class in qa.generator.clusters
 
BeakedWhaleCluster() - Constructor for class qa.generator.clusters.BeakedWhaleCluster
 
beakedWhaleDefaults() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
beam - Enum constant in enum class tethys.localization.TimeReference
 
Beam2DPlot - Class in bearinglocaliser.beamformer.display
 
Beam2DPlot(WrappedBeamFormAlgorithm, String, int, BeamAlgorithmParams) - Constructor for class bearinglocaliser.beamformer.display.Beam2DPlot
 
BeamAlgoParamsPane - Class in beamformer.algorithms
 
BeamAlgoParamsPane(Object, BeamFormerBaseControl) - Constructor for class beamformer.algorithms.BeamAlgoParamsPane
 
BeamAlgoParamsPane.BeamgramStatus - Enum Class in beamformer.algorithms
 
BeamAlgoParamsPane.BeamInfo - Class in beamformer.algorithms
Inner class, containing beam information for each beam in the spreadsheet
BeamAlgorithmParams - Class in beamformer
 
BeamAlgorithmParams(String, int, int) - Constructor for class beamformer.BeamAlgorithmParams
Main constructor
BeamAlgorithmProvider - Interface in beamformer.algorithms
Provider of beam former algorithms - may need > 1 algorithm object if channels are grouped into separate array sections, e.g.
BeamDataDisplay - Class in beamformer.localiser.plot
 
BeamDataDisplay(BeamFormLocaliserControl, int, String, String, String) - Constructor for class beamformer.localiser.plot.BeamDataDisplay
 
BeamDataDisplayF - Class in beamformer.localiser.plot
 
BeamDataDisplayF(BeamFormLocaliserControl, int, String, String) - Constructor for class beamformer.localiser.plot.BeamDataDisplayF
 
BeamFormBearingWrapper - Class in bearinglocaliser.beamformer
Class to wrap the beam former control system and extract from it the algorithms that can create beamograms and then wrap each of those up so that they become available to the more generic bearing localiser.
BeamFormBearingWrapper(BearingLocaliserControl) - Constructor for class bearinglocaliser.beamformer.BeamFormBearingWrapper
 
BeamformControl - Class in difar.beamforming
This module requires audio from a DIFAR sonobuoy and will output directional audio by using simple beamforming algorithms.
BeamformControl(String) - Constructor for class difar.beamforming.BeamformControl
 
beamFormDataUnit(PamDataUnit) - Method in class beamformer.localiser.BeamFormLocaliserControl
Run the beam former within the given time-frequency box.
beamFormDataUnit(PamDataUnit) - Method in class beamformer.localiser.BeamFormLocProcess
Run the beam former within the given time-frequency box.
beamformer - package beamformer
 
beamformer.algorithms - package beamformer.algorithms
 
beamformer.algorithms.basicFreqDomain - package beamformer.algorithms.basicFreqDomain
 
beamformer.algorithms.mvdr - package beamformer.algorithms.mvdr
 
beamformer.algorithms.nullalgo - package beamformer.algorithms.nullalgo
 
beamformer.annotation - package beamformer.annotation
 
beamformer.continuous - package beamformer.continuous
 
beamformer.loc - package beamformer.loc
 
beamformer.localiser - package beamformer.localiser
 
beamformer.localiser.dialog - package beamformer.localiser.dialog
 
beamformer.localiser.plot - package beamformer.localiser.plot
 
beamformer.plot - package beamformer.plot
 
BeamFormerAlgorithm - Interface in beamformer.algorithms
 
BeamFormerAnnotation - Class in beamformer.annotation
Beam former annotation that can be added to any data unit as an annotation.
BeamFormerAnnotation(DataAnnotationType, BeamFormerLocalisation) - Constructor for class beamformer.annotation.BeamFormerAnnotation
 
BeamFormerBaseControl - Class in beamformer
 
BeamFormerBaseControl(String, String) - Constructor for class beamformer.BeamFormerBaseControl
 
BeamFormerBaseProcess - Class in beamformer
Base process for both continuous and detect-then-localise beam forming.
BeamFormerBaseProcess(BeamFormerBaseControl, boolean) - Constructor for class beamformer.BeamFormerBaseProcess
 
BeamFormerControl - Class in beamformer.continuous
 
BeamFormerControl(String) - Constructor for class beamformer.continuous.BeamFormerControl
Main constructor
BeamFormerDataBlock - Class in beamformer.continuous
 
BeamFormerDataBlock(String, PamProcess, int, int, int) - Constructor for class beamformer.continuous.BeamFormerDataBlock
 
BeamFormerDataUnit - Class in beamformer.continuous
 
BeamFormerDataUnit(long, int, int, long, long, ComplexArray, int) - Constructor for class beamformer.continuous.BeamFormerDataUnit
 
BeamFormerLocalisation - Class in beamformer.loc
 
BeamFormerLocalisation(PamDataUnit, int, int, double[], double) - Constructor for class beamformer.loc.BeamFormerLocalisation
 
BeamFormerParams - Class in beamformer
 
BeamFormerParams() - Constructor for class beamformer.BeamFormerParams
Main constructor
BeamFormerProcess - Class in beamformer.continuous
Main beam forming process.
BeamFormerProcess(BeamFormerControl) - Constructor for class beamformer.continuous.BeamFormerProcess
 
BeamformerSettingsPane - Class in beamformer
 
BeamformerSettingsPane(Object, BeamFormerBaseControl) - Constructor for class beamformer.BeamformerSettingsPane
 
beamFormGroup(PamDataUnit, BeamFormLocProcess.BeamOGroup) - Method in class beamformer.localiser.BeamFormLocProcess
Beam for a data unit within a particular beam group.
BeamFormLocaliserControl - Class in beamformer.localiser
 
BeamFormLocaliserControl(String) - Constructor for class beamformer.localiser.BeamFormLocaliserControl
Deprecated.
BeamFormLocProcess - Class in beamformer.localiser
This process doesn't calculate continuous beams, but when data do arrive, it calculates a beam'O'Gram for data in that time-frequency box and estimates a best location based on that time interval.
BeamFormLocProcess(BeamFormLocaliserControl) - Constructor for class beamformer.localiser.BeamFormLocProcess
 
BeamformParameters - Class in difar.beamforming
 
BeamformParameters() - Constructor for class difar.beamforming.BeamformParameters
 
BeamformParamsDialog - Class in difar.beamforming
 
BeamformProcess - Class in difar.beamforming
 
BeamformProcess(PamControlledUnit) - Constructor for class difar.beamforming.BeamformProcess
 
BeamformSidePanel - Class in difar.beamforming
The DIFAR SidePanel contains the list of DIFAR classifications, to allow the user to choose which classification is assigned by default.
BeamformSidePanel(BeamformControl) - Constructor for class difar.beamforming.BeamformSidePanel
 
BeamGroupProcess - Class in beamformer
Handle channel groupings so that the actual algorithm gets called with a complete array of all channels in it's group in one call.
BeamGroupProcess(BeamFormerBaseProcess, BeamAlgorithmProvider, BeamAlgorithmParams, int, int, int) - Constructor for class beamformer.BeamGroupProcess
 
BeamInfo(int, int, int, int, double[]) - Constructor for class beamformer.algorithms.BeamAlgoParamsPane.BeamInfo
 
BeamInformation - Class in beamformer.algorithms
Information about a specific beam
BeamInformation() - Constructor for class beamformer.algorithms.BeamInformation
 
BeamLocaliserData - Class in beamformer.localiser
Temporary data used during beam forming, e.g.
BeamLocaliserData(long) - Constructor for class beamformer.localiser.BeamLocaliserData
 
BeamLocaliserData(long, FFTDataBlock, BeamOGramDataBlock, List<FFTDataUnit>, List<BeamOGramDataUnit>, double[], double[]) - Constructor for class beamformer.localiser.BeamLocaliserData
 
BeamLocaliserObservable - Class in beamformer.localiser
Observe things like updated graphics on beam former.
BeamLocaliserObservable() - Constructor for class beamformer.localiser.BeamLocaliserObservable
 
BeamLocDisplayComponent - Class in beamformer.localiser.plot
 
BeamLocDisplayComponent(BeamLocDisplayProvider, BeamFormLocaliserControl, UserDisplayControl, String) - Constructor for class beamformer.localiser.plot.BeamLocDisplayComponent
 
BeamLocDisplayProvider - Class in beamformer.localiser.plot
 
BeamLocDisplayProvider(BeamFormLocaliserControl) - Constructor for class beamformer.localiser.plot.BeamLocDisplayProvider
 
BEAMOGRAMBAD - Enum constant in enum class beamformer.algorithms.BeamAlgoParamsPane.BeamgramStatus
 
BeamOGramControlPane - Class in beamformer.plot
 
BeamOGramControlPane(TDGraphFX, BeamOGramPlotInfo) - Constructor for class beamformer.plot.BeamOGramControlPane
 
BeamOGramDataBlock - Class in beamformer.continuous
 
BeamOGramDataBlock(String, PamProcess, int) - Constructor for class beamformer.continuous.BeamOGramDataBlock
 
BeamOGramDataUnit - Class in beamformer.continuous
Data output for the BaemOGram.
BeamOGramDataUnit(long, int, int, long, long, double[][][], int) - Constructor for class beamformer.continuous.BeamOGramDataUnit
 
BEAMOGRAMGOOD - Enum constant in enum class beamformer.algorithms.BeamAlgoParamsPane.BeamgramStatus
 
BeamOGramLocalisation - Class in beamformer.plot
 
BeamOGramLocalisation(BeamOGramDataUnit, int, double) - Constructor for class beamformer.plot.BeamOGramLocalisation
 
BEAMOGRAMNOTUSED - Enum constant in enum class beamformer.algorithms.BeamAlgoParamsPane.BeamgramStatus
 
BeamOGramPlotData - Class in beamformer.plot
 
BeamOGramPlotData(Scrolling2DPlotInfo, int) - Constructor for class beamformer.plot.BeamOGramPlotData
 
BeamOGramPlotInfo - Class in beamformer.plot
 
BeamOGramPlotInfo(TDDataProviderFX, TDGraphFX, BeamFormerBaseControl, DataBlock2D) - Constructor for class beamformer.plot.BeamOGramPlotInfo
 
BeamOGramPlotParams - Class in beamformer.plot
 
BeamOGramPlotParams() - Constructor for class beamformer.plot.BeamOGramPlotParams
 
BeamOGramPlotProvider - Class in beamformer.plot
 
BeamOGramPlotProvider(BeamFormerBaseControl, BeamOGramDataBlock) - Constructor for class beamformer.plot.BeamOGramPlotProvider
 
Bearing - Enum constant in enum class tethys.localization.LocalizationTypes
 
BEARING - Enum constant in enum class loggerForms.PropertyTypes
 
BEARING - Enum constant in enum class PamView.GeneralProjector.ParameterType
 
Bearing2DPlot - Class in bearinglocaliser.display
Can plot lines or scaled images or both.
Bearing2DPlot(String) - Constructor for class bearinglocaliser.display.Bearing2DPlot
 
BearingAdvMHTPane - Class in clickTrainDetector.layout.mht
An advanced pane for bearing measurements.
BearingAdvMHTPane(SimpleChi2VarParams, ResultConverter) - Constructor for class clickTrainDetector.layout.mht.BearingAdvMHTPane
 
bearingAlgorithm - Variable in class bearinglocaliser.BearingAlgorithmGroup
 
BearingAlgorithm - Interface in bearinglocaliser.algorithms
 
BearingAlgorithmGroup - Class in bearinglocaliser
 
BearingAlgorithmGroup(int, int, BearingAlgorithmProvider, BearingAlgorithm) - Constructor for class bearinglocaliser.BearingAlgorithmGroup
 
BearingAlgorithmParams - Class in bearinglocaliser.algorithms
 
BearingAlgorithmParams() - Constructor for class bearinglocaliser.algorithms.BearingAlgorithmParams
Constructor used mainly by the beamogram wrapper class (WrappedBeamFormParams), where the bearing params aren't set but the beamogram params are
BearingAlgorithmParams(int, int) - Constructor for class bearinglocaliser.algorithms.BearingAlgorithmParams
Standard constructor
BearingAlgorithmProvider - Class in bearinglocaliser.algorithms
 
BearingAlgorithmProvider() - Constructor for class bearinglocaliser.algorithms.BearingAlgorithmProvider
 
bearingAmbiguity() - Method in class clickDetector.ClickLocalisation
 
bearingAmbiguity() - Method in class difar.DifarLocalisation
 
bearingAmbiguity() - Method in class difar.trackedGroups.TrackedGroupLocalisation
 
bearingAmbiguity() - Method in class loc3d_Thode.TowedArray3DLocalization
 
bearingAmbiguity() - Method in class Localiser.detectionGroupLocaliser.GroupLocalisation
 
bearingAmbiguity() - Method in class PamDetection.AbstractLocalisation
Deprecated.
bearingAmbiguity() - Method in class targetMotionOld.TargetMotionLocalisation
Deprecated.
 
bearingAmbiguity() - Method in class whistleDetector.WhistleLocalisation
 
bearingAmbiguity() - Method in class whistlesAndMoans.WhistleBearingInfo
 
BearingAnnotation - Class in bearinglocaliser.annotation
 
BearingAnnotation(BearingAnnotationType, BearingLocalisation) - Constructor for class bearinglocaliser.annotation.BearingAnnotation
 
BearingAnnotationBinary - Class in bearinglocaliser.annotation
 
BearingAnnotationBinary(BearingAnnotationType) - Constructor for class bearinglocaliser.annotation.BearingAnnotationBinary
 
BearingAnnotationSQL - Class in bearinglocaliser.annotation
 
BearingAnnotationSQL(BearingAnnotationType) - Constructor for class bearinglocaliser.annotation.BearingAnnotationSQL
 
BearingAnnotationType - Class in bearinglocaliser.annotation
 
BearingAnnotationType() - Constructor for class bearinglocaliser.annotation.BearingAnnotationType
 
BearingChi2 - Class in clickTrainDetector.clickTrainAlgorithms.mht.mhtvar
Chi2 value for changing bearing.
BearingChi2() - Constructor for class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.BearingChi2
 
BearingChi2Delta - Class in clickTrainDetector.clickTrainAlgorithms.mht.mhtvar
Measures the difference in change between three bearing measurements.
BearingChi2Delta() - Constructor for class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.BearingChi2Delta
 
BearingChi2VarParams - Class in clickTrainDetector.clickTrainAlgorithms.mht.mhtvar
Subclass of parameters for bearing.
BearingChi2VarParams(SimpleChi2VarParams) - Constructor for class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.BearingChi2VarParams
 
BearingChi2VarParams(String) - Constructor for class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.BearingChi2VarParams
 
BearingChi2VarParams(String, String) - Constructor for class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.BearingChi2VarParams
 
BearingChi2VarParams(String, String, double, double) - Constructor for class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.BearingChi2VarParams
 
BearingChi2VarParams(String, String, double, double, double) - Constructor for class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.BearingChi2VarParams
 
BearingChi2VarParams.BearingJumpDrctn - Enum Class in clickTrainDetector.clickTrainAlgorithms.mht.mhtvar
Simple Enum indicating the direction the jump can be.
BearingClassification - Class in clickTrainDetector.classification.bearingClassifier
Classification result from the bearing classifier.
BearingClassification(int, double, double, double) - Constructor for class clickTrainDetector.classification.bearingClassifier.BearingClassification
Constructor for the bearing classifier.
BearingClassification(String) - Constructor for class clickTrainDetector.classification.bearingClassifier.BearingClassification
Bearing classification from a JSON string.
BearingClassifier - Class in clickTrainDetector.classification.bearingClassifier
A bearing based classifier for click train.
BearingClassifier(int) - Constructor for class clickTrainDetector.classification.bearingClassifier.BearingClassifier
Constructor for the bearing classifier
BearingClassifier(ClickTrainControl, int) - Constructor for class clickTrainDetector.classification.bearingClassifier.BearingClassifier
Constructor for the bearing classifier
BEARINGCLASSIFIER - Enum constant in enum class clickTrainDetector.classification.CTClassifierType
 
BearingClassifierGraphics - Class in clickTrainDetector.layout.classification.bearingClassifier
Manager for UI stuff for the bearing classifier.
BearingClassifierGraphics(ClickTrainControl, BearingClassifier) - Constructor for class clickTrainDetector.layout.classification.bearingClassifier.BearingClassifierGraphics
The bearing classifier graphics.
BearingClassifierJSON - Class in clickTrainDetector.classification.bearingClassifier
JSON string logging for the bearing classifier.
BearingClassifierJSON() - Constructor for class clickTrainDetector.classification.bearingClassifier.BearingClassifierJSON
 
BearingClassifierPane - Class in clickTrainDetector.layout.classification.bearingClassifier
The Bearing classifier settings pane.
BearingClassifierPane(Object) - Constructor for class clickTrainDetector.layout.classification.bearingClassifier.BearingClassifierPane
 
BearingClassifierParams - Class in clickTrainDetector.classification.bearingClassifier
The bearing classifier parameters.
BearingClassifierParams() - Constructor for class clickTrainDetector.classification.bearingClassifier.BearingClassifierParams
 
bearingCorrection - Variable in class Azigram.AzigramParameters
Bearing bias/correction (degrees?) (parameter from Thode Azigram)
BearingDataBlock - Class in bearinglocaliser
 
BearingDataBlock(BearingLocaliserControl, BearingProcess, String) - Constructor for class bearinglocaliser.BearingDataBlock
 
BearingDataDisplay - Interface in bearinglocaliser.display
Display component interface for one bearing channel group.
BearingDisplayComponent - Class in bearinglocaliser.display
 
BearingDisplayComponent(BearingDisplayProvider, BearingLocaliserControl, UserDisplayControl, String) - Constructor for class bearinglocaliser.display.BearingDisplayComponent
 
BearingDisplayProvider - Class in bearinglocaliser.display
 
BearingDisplayProvider(BearingLocaliserControl) - Constructor for class bearinglocaliser.display.BearingDisplayProvider
 
BEARINGinfo - Class in loggerForms.propertyInfos
 
BEARINGinfo(ControlDescription, int, BearingTypes, boolean) - Constructor for class loggerForms.propertyInfos.BEARINGinfo
 
bearingJumpDrctn - Variable in class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.BearingChi2VarParams
Whether the bearing jump can be in both directions, positive or negative.
bearingJumpEnable - Variable in class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.BearingChi2VarParams
Whether the bearing jump is used.
bearingLimMax - Variable in class clickTrainDetector.classification.bearingClassifier.BearingClassifierParams
The maximum limit in which the classifier works.
bearingLimMin - Variable in class clickTrainDetector.classification.bearingClassifier.BearingClassifierParams
The minimum bearing limits in which the classifier works
bearingLims - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
bearingLineWidth - Variable in class difar.DifarParameters
 
BearingLocalisation - Class in bearinglocaliser
 
BearingLocalisation(PamDataUnit, String, int, int, double[], double[], double[]) - Constructor for class bearinglocaliser.BearingLocalisation
 
bearinglocaliser - package bearinglocaliser
 
BearingLocaliser - Interface in Localiser.algorithms.timeDelayLocalisers.bearingLoc
Class to estimate bearings, with errors from a closely spaced hydrophone array
bearinglocaliser.algorithms - package bearinglocaliser.algorithms
 
bearinglocaliser.annotation - package bearinglocaliser.annotation
 
bearinglocaliser.beamformer - package bearinglocaliser.beamformer
 
bearinglocaliser.beamformer.display - package bearinglocaliser.beamformer.display
 
bearinglocaliser.dialog - package bearinglocaliser.dialog
 
bearinglocaliser.display - package bearinglocaliser.display
 
bearinglocaliser.offline - package bearinglocaliser.offline
 
bearinglocaliser.toad - package bearinglocaliser.toad
 
bearinglocaliser.toad.display - package bearinglocaliser.toad.display
 
BearingLocaliserControl - Class in bearinglocaliser
 
BearingLocaliserControl(String) - Constructor for class bearinglocaliser.BearingLocaliserControl
 
BearingLocaliserParams - Class in bearinglocaliser
 
BearingLocaliserParams() - Constructor for class bearinglocaliser.BearingLocaliserParams
 
BearingLocaliserSelector - Class in Localiser.algorithms.timeDelayLocalisers.bearingLoc
Class to automatically select / create the most appropriate type of bearing localiser.
BearingLocaliserSelector() - Constructor for class Localiser.algorithms.timeDelayLocalisers.bearingLoc.BearingLocaliserSelector
 
BearingLocAnnotation - Class in Localiser.algorithms.timeDelayLocalisers.bearingLoc.annotation
 
BearingLocAnnotation(BearingLocAnnotationType, double[][]) - Constructor for class Localiser.algorithms.timeDelayLocalisers.bearingLoc.annotation.BearingLocAnnotation
 
BearingLocAnnotationBinary - Class in Localiser.algorithms.timeDelayLocalisers.bearingLoc.annotation
 
BearingLocAnnotationBinary(DataAnnotationType<BearingLocAnnotation>) - Constructor for class Localiser.algorithms.timeDelayLocalisers.bearingLoc.annotation.BearingLocAnnotationBinary
 
BearingLocAnnotationType - Class in Localiser.algorithms.timeDelayLocalisers.bearingLoc.annotation
 
BearingLocAnnotationType() - Constructor for class Localiser.algorithms.timeDelayLocalisers.bearingLoc.annotation.BearingLocAnnotationType
 
BearingLocSettingsPane - Class in bearinglocaliser.dialog
 
BearingLocSettingsPane(Object, BearingLocaliserControl) - Constructor for class bearinglocaliser.dialog.BearingLocSettingsPane
 
BearingMean - Class in PamUtils
Calculate the mean of a load of angles in degrees.
BearingMean(double[]) - Constructor for class PamUtils.BearingMean
 
BearingMHTVarPane - Class in clickTrainDetector.layout.mht
 
BearingMHTVarPane(SimpleChi2VarParams, ResultConverter) - Constructor for class clickTrainDetector.layout.mht.BearingMHTVarPane
 
bearingOverlap(HoverData) - Method in class PamView.paneloverlay.overlaymark.MarkDataMatcher
Does a bearing line to the point from the detection origin overlap the mark.
BearingPanel - Class in loggerForms.formdesign.propertypanels
 
BearingPanel(FormEditor, PropertyTypes) - Constructor for class loggerForms.formdesign.propertypanels.BearingPanel
 
BearingProcess - Class in bearinglocaliser
 
BearingProcess(BearingLocaliserControl) - Constructor for class bearinglocaliser.BearingProcess
 
bearingRange - Variable in class dataPlotsFX.clickPlotFX.ClickDisplayParams
The bearing range.
BEARINGS_GROUP - Static variable in class Localiser.detectionGroupLocaliser.DetectionGroupLocaliser2
Flag to use the bearings to localise.
bearingTo(LatLong) - Method in class PamUtils.LatLong
Get the bearing in degree to this latlong to another latlong.
bearingToReference() - Method in class landMarks.LandmarkData
 
BearingTypes - Enum Class in loggerForms
 
BearLocAlgorithmPane - Class in bearinglocaliser.dialog
 
BearLocAlgorithmPane(Object, BearingLocaliserControl, BearingLocSettingsPane) - Constructor for class bearinglocaliser.dialog.BearLocAlgorithmPane
 
BearLocGroupPane - Class in bearinglocaliser.dialog
 
BearLocGroupPane(Object, BearingLocaliserControl, BearingLocSettingsPane) - Constructor for class bearinglocaliser.dialog.BearLocGroupPane
 
BearLocSourcePane - Class in bearinglocaliser.dialog
 
BearLocSourcePane(Object, BearingLocaliserControl, BearingLocSettingsPane) - Constructor for class bearinglocaliser.dialog.BearLocSourcePane
 
BEFORE_FIRST - Static variable in class dataMap.OfflineDataMap
 
beforeFirst() - Method in class generalDatabase.pamCursor.NonScrollablePamCursor
 
beforeFirst() - Method in class generalDatabase.pamCursor.PamCursor
 
beforeFirst() - Method in class generalDatabase.pamCursor.ScrollablePamCursor
 
BELOW_LEVEL - Static variable in class mcc.mccjna.MCCConstants
 
BELOW_RIGHT - Static variable in class Layout.PamAxis
 
BELOW_RIGHT - Static variable in class pamViewFX.fxNodes.pamAxis.PamAxisFX
 
BeskopeClassifierManager - Class in matchedTemplateClassifer.bespokeClassification
Manages classification flags and/or any bespoke alteration to specific types of data units after an MT Classification has been processed.
BeskopeClassifierManager(MTProcess) - Constructor for class matchedTemplateClassifer.bespokeClassification.BeskopeClassifierManager
 
BespokeBackups - Class in backupmanager.bespoke
Can back up anything, PAMGuard or not.
BespokeBackups(BackupManager) - Constructor for class backupmanager.bespoke.BespokeBackups
 
BespokeDataMapGraphic - Interface in dataMap
Bespoke drawing on datamap.
bespokeDataUnitFlags(PamDataUnit, boolean) - Method in class matchedTemplateClassifer.bespokeClassification.BeskopeClassifierManager
Classifies specific data units if they have bespoke data unit specific species flags.
BespokeFileStream - Class in backupmanager.bespoke
 
BespokeFileStream(SettingsNameProvider, String) - Constructor for class backupmanager.bespoke.BespokeFileStream
 
BespokeIdentity - Class in backupmanager.bespoke
 
BespokeIdentity(String) - Constructor for class backupmanager.bespoke.BespokeIdentity
 
BespokeNameDialog - Class in backupmanager.bespoke
 
BespokeSettings - Class in backupmanager.bespoke
 
BespokeSettings() - Constructor for class backupmanager.bespoke.BespokeSettings
 
BestBeamSelector<T extends PamDataUnit> - Class in beamformer.continuous
This class can be used within a detector that may or may not be attached to a beam former (alternative is probably raw fft data).
BestBeamSelector(PamDataBlock, PamDataBlock<T>) - Constructor for class beamformer.continuous.BestBeamSelector
Needs the source data (to see if it's beam data or not) and the output data block.
BETA - Enum constant in enum class PamController.PamguardVersionInfo.ReleaseType
 
BetterPDProvider - Class in whistleDetector
 
BetterPDProvider() - Constructor for class whistleDetector.BetterPDProvider
 
BetterPeakDetector - Class in whistleDetector
 
BetterPeakDetector(WhistleControl, WhistleDetector, FFTDataBlock, int) - Constructor for class whistleDetector.BetterPeakDetector
 
BFAnnotationBinary - Class in beamformer.annotation
 
BFAnnotationBinary(DataAnnotationType<BeamFormerAnnotation>) - Constructor for class beamformer.annotation.BFAnnotationBinary
 
BFAnnotationLogging - Class in beamformer.annotation
 
BFAnnotationLogging(BFAnnotationType) - Constructor for class beamformer.annotation.BFAnnotationLogging
 
BFAnnotationType - Class in beamformer.annotation
 
BFAnnotationType(BeamFormLocaliserControl) - Constructor for class beamformer.annotation.BFAnnotationType
 
BFDetectionMonitor - Class in beamformer.localiser
 
BFDetectionMonitor(BeamFormLocaliserControl) - Constructor for class beamformer.localiser.BFDetectionMonitor
 
BFLDataOutput - Class in beamformer.localiser
 
BFLDataOutput(BeamFormLocaliserControl, BeamFormLocProcess, String) - Constructor for class beamformer.localiser.BFLDataOutput
 
BFLocAlgorithmPane - Class in beamformer.localiser.dialog
 
BFLocAlgorithmPane(Object, BeamFormLocaliserControl, BFLocSettingsPane2) - Constructor for class beamformer.localiser.dialog.BFLocAlgorithmPane
 
BFLocaliserParams - Class in beamformer.localiser
Parameters for beam former localiser
BFLocaliserParams() - Constructor for class beamformer.localiser.BFLocaliserParams
 
BFLocGroupPane - Class in beamformer.localiser.dialog
 
BFLocGroupPane(Object, BeamFormLocaliserControl, BFLocSettingsPane2) - Constructor for class beamformer.localiser.dialog.BFLocGroupPane
 
BFLocSettingsPane2 - Class in beamformer.localiser.dialog
 
BFLocSettingsPane2(Object, BeamFormLocaliserControl) - Constructor for class beamformer.localiser.dialog.BFLocSettingsPane2
 
BFLocSourcePane - Class in beamformer.localiser.dialog
 
BFLocSourcePane(Object, BeamFormLocaliserControl, BFLocSettingsPane2) - Constructor for class beamformer.localiser.dialog.BFLocSourcePane
 
BI330OPMODE - Static variable in class mcc.mccjna.MCCConstants
 
BI9513CHIPNSRC - Static variable in class mcc.mccjna.MCCConstants
 
BIADAIMODE - Static variable in class mcc.mccjna.MCCConstants
 
BIADCFG - Static variable in class mcc.mccjna.MCCConstants
 
BIADCHANAIMODE - Static variable in class mcc.mccjna.MCCConstants
 
BIADCHANTYPE - Static variable in class mcc.mccjna.MCCConstants
 
BIADCSETTLETIME - Static variable in class mcc.mccjna.MCCConstants
 
BIADDATARATE - Static variable in class mcc.mccjna.MCCConstants
 
BIADFIFOSIZE - Static variable in class mcc.mccjna.MCCConstants
 
BIADINPUTMODE - Static variable in class mcc.mccjna.MCCConstants
 
BIADPOLARITY - Static variable in class mcc.mccjna.MCCConstants
 
BIADRES - Static variable in class mcc.mccjna.MCCConstants
 
BIADSOURCE - Static variable in class mcc.mccjna.MCCConstants
 
BIADTIMINGMODE - Static variable in class mcc.mccjna.MCCConstants
 
BIADTRIGCOUNT - Static variable in class mcc.mccjna.MCCConstants
 
BIADTRIGSRC - Static variable in class mcc.mccjna.MCCConstants
 
BIADXFERMODE - Static variable in class mcc.mccjna.MCCConstants
 
BIAIWAVETYPE - Static variable in class mcc.mccjna.MCCConstants
 
BIBASEADR - Static variable in class mcc.mccjna.MCCConstants
 
BIBNCSRC - Static variable in class mcc.mccjna.MCCConstants
 
BIBNCTHRESHOLD - Static variable in class mcc.mccjna.MCCConstants
 
BIBOARDTYPE - Static variable in class mcc.mccjna.MCCConstants
 
BIBURSTMODE - Static variable in class mcc.mccjna.MCCConstants
 
BICALFACTOR1 - Static variable in class mcc.mccjna.MCCConstants
 
BICALFACTOR2 - Static variable in class mcc.mccjna.MCCConstants
 
BICALOUTPUT - Static variable in class mcc.mccjna.MCCConstants
 
BICALTABLETYPE - Static variable in class mcc.mccjna.MCCConstants
 
BICHANBRIDGETYPE - Static variable in class mcc.mccjna.MCCConstants
 
BICHANCFG - Static variable in class mcc.mccjna.MCCConstants
 
BICHANRTDTYPE - Static variable in class mcc.mccjna.MCCConstants
 
BICHANTCTYPE - Static variable in class mcc.mccjna.MCCConstants
 
BICIDEVNUM - Static variable in class mcc.mccjna.MCCConstants
 
BICINUMDEVS - Static variable in class mcc.mccjna.MCCConstants
 
BICLOCK - Static variable in class mcc.mccjna.MCCConstants
 
BICOMADDR2 - Static variable in class mcc.mccjna.MCCConstants
 
BICTLRNUM - Static variable in class mcc.mccjna.MCCConstants
 
BICTR0SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR10SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR11SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR12SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR13SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR14SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR1SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR2SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR3SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR4SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR5SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR6SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR7SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR8SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTR9SRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTRINTSRC - Static variable in class mcc.mccjna.MCCConstants
 
BICTRLINKING - Static variable in class mcc.mccjna.MCCConstants
 
BICTRLLINES - Static variable in class mcc.mccjna.MCCConstants
 
BICTRTRIGCOUNT - Static variable in class mcc.mccjna.MCCConstants
 
BICTSRTS1 - Static variable in class mcc.mccjna.MCCConstants
 
BICTSRTS2 - Static variable in class mcc.mccjna.MCCConstants
 
BIDAC0VREF - Static variable in class mcc.mccjna.MCCConstants
 
BIDAC1VREF - Static variable in class mcc.mccjna.MCCConstants
 
BIDACFORCESENSE - Static variable in class mcc.mccjna.MCCConstants
 
BIDACINSTALLED - Static variable in class mcc.mccjna.MCCConstants
 
BIDACPOLARITY - Static variable in class mcc.mccjna.MCCConstants
 
BIDACRANGE - Static variable in class mcc.mccjna.MCCConstants
 
BIDACRES - Static variable in class mcc.mccjna.MCCConstants
 
BIDACSAMPLEHOLD - Static variable in class mcc.mccjna.MCCConstants
 
BIDACSTARTUP - Static variable in class mcc.mccjna.MCCConstants
 
BIDACTRIG - Static variable in class mcc.mccjna.MCCConstants
 
BIDACTRIGCOUNT - Static variable in class mcc.mccjna.MCCConstants
 
BIDACUPDATE - Static variable in class mcc.mccjna.MCCConstants
 
BIDACUPDATECMD - Static variable in class mcc.mccjna.MCCConstants
 
BIDACUPDATEMODE - Static variable in class mcc.mccjna.MCCConstants
 
BIDAQITRIGCOUNT - Static variable in class mcc.mccjna.MCCConstants
 
BIDETECTOPENTC - Static variable in class mcc.mccjna.MCCConstants
 
BIDEVMACADDR - Static variable in class mcc.mccjna.MCCConstants
 
BIDEVNOTES - Static variable in class mcc.mccjna.MCCConstants
 
BIDEVSERIALNUM - Static variable in class mcc.mccjna.MCCConstants
 
BIDEVUNIQUEID - Static variable in class mcc.mccjna.MCCConstants
 
BIDEVVERSION - Static variable in class mcc.mccjna.MCCConstants
 
BIDIALARMMASK - Static variable in class mcc.mccjna.MCCConstants
 
BIDIDEBOUNCESTATE - Static variable in class mcc.mccjna.MCCConstants
 
BIDIDEBOUNCETIME - Static variable in class mcc.mccjna.MCCConstants
 
BIDIDEVNUM - Static variable in class mcc.mccjna.MCCConstants
 
BIDINUMDEVS - Static variable in class mcc.mccjna.MCCConstants
 
BIDIOENABLE - Static variable in class mcc.mccjna.MCCConstants
 
BIDISOFILTER - Static variable in class mcc.mccjna.MCCConstants
 
BIDITHERON - Static variable in class mcc.mccjna.MCCConstants
 
BIDITRIGCOUNT - Static variable in class mcc.mccjna.MCCConstants
 
BIDMACHAN - Static variable in class mcc.mccjna.MCCConstants
 
BIDOTRIGCOUNT - Static variable in class mcc.mccjna.MCCConstants
 
BIDTBOARD - Static variable in class mcc.mccjna.MCCConstants
 
BIEXCITATION - Static variable in class mcc.mccjna.MCCConstants
 
BIEXTCLKTYPE - Static variable in class mcc.mccjna.MCCConstants
 
BIEXTINPACEREDGE - Static variable in class mcc.mccjna.MCCConstants
 
BIEXTOUTPACEREDGE - Static variable in class mcc.mccjna.MCCConstants
 
BIFACTORYID - Static variable in class mcc.mccjna.MCCConstants
 
BIFWVERSION - Static variable in class mcc.mccjna.MCCConstants
 
BIGGEST - Enum constant in enum class gpl.contour.ContourMerge
 
BIHIDELOGINDLG - Static variable in class mcc.mccjna.MCCConstants
 
BIHTTPPORT - Static variable in class mcc.mccjna.MCCConstants
 
BIINDEXCFG - Static variable in class mcc.mccjna.MCCConstants
 
BIINITIALIZED - Static variable in class mcc.mccjna.MCCConstants
 
BIINPUTPACEROUT - Static variable in class mcc.mccjna.MCCConstants
 
BIINT32PRIORITY - Static variable in class mcc.mccjna.MCCConstants
 
BIINT32SRC - Static variable in class mcc.mccjna.MCCConstants
 
BIINTEDGE - Static variable in class mcc.mccjna.MCCConstants
 
BIINTLEVEL - Static variable in class mcc.mccjna.MCCConstants
 
BIINTP1LEVEL - Static variable in class mcc.mccjna.MCCConstants
 
BIINTP2LEVEL - Static variable in class mcc.mccjna.MCCConstants
 
BIIRQCONNECT - Static variable in class mcc.mccjna.MCCConstants
 
BIMEMCOUNT - Static variable in class mcc.mccjna.MCCConstants
 
BIMEMSIZE - Static variable in class mcc.mccjna.MCCConstants
 
BIMFGSERIALNUM - Static variable in class mcc.mccjna.MCCConstants
 
binArray(int, int, double) - Method in class matchedTemplateClassifer.MTClassifier
 
BINARY - Enum constant in enum class dataModelFX.connectionNodes.ModuleIconFactory.ModuleIcon
 
BINARY_ENCODING - Static variable in class mcc.mccjna.MCCConstants
 
BINARY_FILE_NAME_LENGTH - Static variable in class generalDatabase.PamSubtableDefinition
 
BinaryBackupParams - Class in binaryFileStorage.backup
 
BinaryBackupParams() - Constructor for class binaryFileStorage.backup.BinaryBackupParams
 
BinaryBackupStream - Class in binaryFileStorage.backup
 
BinaryBackupStream(BinaryStore) - Constructor for class binaryFileStorage.backup.BinaryBackupStream
 
binaryClassification - Variable in class rawDeepLearningClassifier.dlClassification.animalSpot.StandardModelParams
Which classes to apply binary classification to.
binaryClassification - Variable in class rawDeepLearningClassifier.dlClassification.orcaSpot.OrcaSpotModelResult
Do we call this a yes/no classification
BinaryClickProcess - Class in clickDetector
 
BinaryClickProcess(ClickControl) - Constructor for class clickDetector.BinaryClickProcess
 
BinaryConnectionNode - Class in dataModelFX.connectionNodes
Connection node for the binary storage module.
BinaryConnectionNode(DataModelConnectPane) - Constructor for class dataModelFX.connectionNodes.BinaryConnectionNode
 
BinaryDataSink - Interface in binaryFileStorage
Interface for users of binary data as it's being read from a file.
BinaryDataSource - Class in binaryFileStorage
Not just a source, but also a sink for binary data from the binary store.
BinaryDataSource(PamDataBlock) - Constructor for class binaryFileStorage.BinaryDataSource
Create a binary data source.
BinaryDataSource(PamDataBlock, boolean) - Constructor for class binaryFileStorage.BinaryDataSource
Create a binary data source.
BINARYFILE - Static variable in class generalDatabase.PamSubtableDefinition
 
BinaryFileMatcher - Class in PamguardMVC
Match data based on binary file information.
BinaryFileMatcher() - Constructor for class PamguardMVC.BinaryFileMatcher
 
binaryFileStorage - package binaryFileStorage
 
binaryFileStorage.backup - package binaryFileStorage.backup
 
binaryFileStorage.checker - package binaryFileStorage.checker
 
binaryFileStorage.layoutFX - package binaryFileStorage.layoutFX
 
binaryFooter - Variable in class binaryFileStorage.BinaryHeaderAndFooter
 
BinaryFooter - Class in binaryFileStorage
 
BinaryFooter() - Constructor for class binaryFileStorage.BinaryFooter
 
BinaryFooter(long, long, int, long) - Constructor for class binaryFileStorage.BinaryFooter
 
binaryHeader - Variable in class binaryFileStorage.BinaryHeaderAndFooter
 
BinaryHeader - Class in binaryFileStorage
 
BinaryHeader() - Constructor for class binaryFileStorage.BinaryHeader
 
BinaryHeader(String, String, String, int) - Constructor for class binaryFileStorage.BinaryHeader
 
BinaryHeaderAndFooter - Class in binaryFileStorage
 
BinaryHeaderAndFooter() - Constructor for class binaryFileStorage.BinaryHeaderAndFooter
 
BinaryInputStream - Class in binaryFileStorage
Used to read data back from a binary data file and either send it off to the associated PamDataBlock or hand it back to the BinaryStore controller, e.g.
BinaryInputStream(BinaryStore, PamDataBlock) - Constructor for class binaryFileStorage.BinaryInputStream
 
BinaryIntegrityChecker - Class in binaryFileStorage.checker
 
BinaryIntegrityChecker(BinaryStore) - Constructor for class binaryFileStorage.checker.BinaryIntegrityChecker
 
BinaryMapMakeProgress - Class in binaryFileStorage
 
BinaryMapMakeProgress(int, String, int, int) - Constructor for class binaryFileStorage.BinaryMapMakeProgress
 
BinaryMapMakingDialog - Class in binaryFileStorage
Not really a dialog, but displayed by BinaryStore while its making maps of stored data during Viewer operation.
BinaryObjectData - Class in binaryFileStorage
Class to temporarily hold an objected data that has just been read from a binary file.
BinaryObjectData(int, byte[]) - Constructor for class binaryFileStorage.BinaryObjectData
Version of constructor to replace previous calls to PackedbinaryObject which is now deprecated and removed.
BinaryObjectData(int, int, byte[], int) - Constructor for class binaryFileStorage.BinaryObjectData
Constructor used when header / footer or other non-data objects are read from a stream.
BinaryObjectData(int, int, DataUnitBaseData, int, byte[], int) - Constructor for class binaryFileStorage.BinaryObjectData
Constructor used when data units are being read from a data stream.
BinaryOfflineDataMap - Class in binaryFileStorage
A binary offline data map is a datamap for a single data stream (i.e.
BinaryOfflineDataMap(BinaryStore, PamDataBlock) - Constructor for class binaryFileStorage.BinaryOfflineDataMap
 
BinaryOfflineDataMapPoint - Class in binaryFileStorage
 
BinaryOfflineDataMapPoint() - Constructor for class binaryFileStorage.BinaryOfflineDataMapPoint
 
BinaryOfflineDataMapPoint(BinaryStore, File, BinaryHeader, BinaryFooter, ModuleHeader, ModuleFooter, Datagram) - Constructor for class binaryFileStorage.BinaryOfflineDataMapPoint
 
BinaryOutputStream - Class in binaryFileStorage
Handles writing of an actual binary data file.
BinaryOutputStream(BinaryStore, PamDataBlock) - Constructor for class binaryFileStorage.BinaryOutputStream
 
BinarySettingsStorage - Class in binaryFileStorage
Manage storage and retrieval of PAMGUARD serialised settings storage in binary files.
BinarySettingsStorage(BinaryStore) - Constructor for class binaryFileStorage.BinarySettingsStorage
 
binarySpace - Variable in class PamguardMVC.DataUnitBaseData
Used to calculate the number of bytes in the base data.
BinaryStorageDialog - Class in binaryFileStorage
 
BinaryStorageDialogPanel - Class in binaryFileStorage
 
BinaryStorageDialogPanel(Window, boolean) - Constructor for class binaryFileStorage.BinaryStorageDialogPanel
 
BinaryStore - Class in binaryFileStorage
The binary store will work very much like the database in that it monitors the output of data streams and when data is added to them it writes it to the binary store.
BinaryStore(String) - Constructor for class binaryFileStorage.BinaryStore
 
BinaryStoreDeleter - Class in binaryFileStorage
 
BinaryStoreDeleter(BinaryStore) - Constructor for class binaryFileStorage.BinaryStoreDeleter
 
BinaryStoreGUIFX - Class in binaryFileStorage.layoutFX
The JavaFX GUI for the binary store module.
BinaryStoreGUIFX(BinaryStore) - Constructor for class binaryFileStorage.layoutFX.BinaryStoreGUIFX
The Binary store control.
BinaryStoreProcess - Class in binaryFileStorage
 
BinaryStoreProcess(BinaryStore) - Constructor for class binaryFileStorage.BinaryStoreProcess
 
BinaryStoreSettings - Class in binaryFileStorage
 
BinaryStoreSettings() - Constructor for class binaryFileStorage.BinaryStoreSettings
 
BinaryStoreSettingsPaneFX - Class in binaryFileStorage.layoutFX
 
BinaryStoreSettingsPaneFX(BinaryStore) - Constructor for class binaryFileStorage.layoutFX.BinaryStoreSettingsPaneFX
 
BinaryStoreStatus - Class in binaryFileStorage
 
BinaryStoreStatus(BinaryStore) - Constructor for class binaryFileStorage.BinaryStoreStatus
 
BinaryStoreStatus(BinaryStore, BinaryHeader, BinaryFooter, BinaryFooter) - Constructor for class binaryFileStorage.BinaryStoreStatus
 
BinaryStoreStatusFuncs - Class in binaryFileStorage
Set of functions used at restarts to determine the status of the binary store.
BinaryStoreStatusFuncs(BinaryStore) - Constructor for class binaryFileStorage.BinaryStoreStatusFuncs
 
BinaryTypes - Class in binaryFileStorage
 
BinaryTypes() - Constructor for class binaryFileStorage.BinaryTypes
 
binaryUIDFunctions - Class in PamguardMVC.uid
Class to handle basic UID functions related to the binary store
binaryUIDFunctions(PamController) - Constructor for class PamguardMVC.uid.binaryUIDFunctions
Main constructor
bindConnectionNode(StandardConnectionNode) - Method in class pamViewFX.fxNodes.connectionPane.structures.ConnectionGroupStructure
Bind a connection node to the group structure i.e.
bindConnectionNode(StandardConnectionNode, boolean) - Method in class pamViewFX.fxNodes.connectionPane.structures.ConnectionGroupStructure
Bind a connection node to the group structure i.e.
bindPlotParams() - Method in class beamformer.plot.BeamOGramPlotInfo
 
bindPlotParams() - Method in class dataPlotsFX.scrollingPlot2D.Scrolling2DPlotInfo
Set up binding between display and control panels.
bindPlotParams() - Method in class dataPlotsFX.spectrogramPlotFX.FFTPlotInfo
 
bindTest() - Method in class videoRangePanel.layoutFX.VRDisplayFX
 
binDurationS - Variable in class tethys.output.StreamExportParams
Bin duration, seconds.
BINETCONNECTCODE - Static variable in class mcc.mccjna.MCCConstants
 
BINETIOTIMEOUT - Static variable in class mcc.mccjna.MCCConstants
 
binFileIndex - Variable in class PamguardMVC.uid.repair.UIDRepairMessage
 
binHi - Variable in class gpl.GPLProcess
 
binLo - Variable in class gpl.GPLProcess
 
BinnedGranularityHandler - Class in tethys.detection
Binned granularity Will have to collect different counts for each type of call for each datablock (if there are such things) so a little more complicated than might be expected.
BinnedGranularityHandler(TethysControl, PamDataBlock, TethysExportParams, StreamExportParams) - Constructor for class tethys.detection.BinnedGranularityHandler
 
BINODEID - Static variable in class mcc.mccjna.MCCConstants
 
BINOITEM - Static variable in class mcc.mccjna.MCCConstants
 
binStatusReport - Variable in class PamguardMVC.uid.repair.UIDRepairRequest
 
binsToHz(double) - Method in class whistlesAndMoans.AbstractWhistleDataBlock
 
binsToHz(int) - Method in class whistleDetector.WhistleDetector
Convert a number of frequency bins in the spectrgram matrix to a frequency in Hz.
binsToSeconds(double) - Method in class whistlesAndMoans.AbstractWhistleDataBlock
 
binsToSeconds(int) - Method in class whistleDetector.WhistleDetector
Convert a number of time bins in the spectrgram matris to a a time in seconds
BINUMADCHANS - Static variable in class mcc.mccjna.MCCConstants
 
BINUMDACHANS - Static variable in class mcc.mccjna.MCCConstants
 
BINUMEXPS - Static variable in class mcc.mccjna.MCCConstants
 
BINUMIOPORTS - Static variable in class mcc.mccjna.MCCConstants
 
BINUMTEMPCHANS - Static variable in class mcc.mccjna.MCCConstants
 
BIOUTPUTPACEROUT - Static variable in class mcc.mccjna.MCCConstants
 
BIP10VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIP15VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIP1PT25VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIP1PT67VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIP1VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIP20VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIP2PT5VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIP2VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIP30VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIP4VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIP5VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIP60VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIPACERCTR0SRC - Static variable in class mcc.mccjna.MCCConstants
 
BIPANID - Static variable in class mcc.mccjna.MCCConstants
 
BIPARENTBOARD - Static variable in class mcc.mccjna.MCCConstants
 
BIPATTERNTRIGPORT - Static variable in class mcc.mccjna.MCCConstants
 
BIPCIREVID - Static variable in class mcc.mccjna.MCCConstants
 
BIPHACFG - Static variable in class mcc.mccjna.MCCConstants
 
BIPHBCFG - Static variable in class mcc.mccjna.MCCConstants
 
BIPOLAR - Static variable in class mcc.mccjna.MCCConstants
 
bipolarRanges - Static variable in class mcc.mccjna.MCCConstants
List of all bipolar ranges
BIPPIODIO - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT005VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT01VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT025AMPS - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT025VOLTSPERVOLT - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT05VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT078VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT125VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT156VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT1VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT25VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT2VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT312VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT5VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIPPT625VOLTS - Static variable in class mcc.mccjna.MCCConstants
 
BIPRNDELAY - Static variable in class mcc.mccjna.MCCConstants
 
BIPRNPORT - Static variable in class mcc.mccjna.MCCConstants
 
BIPROTOCOL - Static variable in class mcc.mccjna.MCCConstants
 
BIPWRJMPR - Static variable in class mcc.mccjna.MCCConstants
 
BIPWRUPSTATE - Static variable in class mcc.mccjna.MCCConstants
 
BIRANGE - Static variable in class mcc.mccjna.MCCConstants
 
BIRFCHANNEL - Static variable in class mcc.mccjna.MCCConstants
 
BIRSS - Static variable in class mcc.mccjna.MCCConstants
 
BIRTDCHANTYPE - Static variable in class mcc.mccjna.MCCConstants
 
BISBX0ADDRESS - Static variable in class mcc.mccjna.MCCConstants
 
BISBX0BOARDNUM - Static variable in class mcc.mccjna.MCCConstants
 
BISBX0DMACHAN - Static variable in class mcc.mccjna.MCCConstants
 
BISBX0INTLEVEL0 - Static variable in class mcc.mccjna.MCCConstants
 
BISBX0INTLEVEL1 - Static variable in class mcc.mccjna.MCCConstants
 
BISBX1ADDRESS - Static variable in class mcc.mccjna.MCCConstants
 
BISBX1BOARDNUM - Static variable in class mcc.mccjna.MCCConstants
 
BISBX1DMACHAN - Static variable in class mcc.mccjna.MCCConstants
 
BISBX1INTLEVEL0 - Static variable in class mcc.mccjna.MCCConstants
 
BISBX1INTLEVEL1 - Static variable in class mcc.mccjna.MCCConstants
 
BISBXBUSWIDTH - Static variable in class mcc.mccjna.MCCConstants
 
BISERIALNUM - Static variable in class mcc.mccjna.MCCConstants
 
BISLOTNUM - Static variable in class mcc.mccjna.MCCConstants
 
BISRCADPACER - Static variable in class mcc.mccjna.MCCConstants
 
BISYNCMODE - Static variable in class mcc.mccjna.MCCConstants
 
BIT_16 - Static variable in class mcc.mccjna.MCCConstants
 
BIT_32 - Static variable in class mcc.mccjna.MCCConstants
 
BIT_48 - Static variable in class mcc.mccjna.MCCConstants
 
BIT_NOT_ONE - Static variable in class mcc.mccjna.MCCConstants
 
BIT_NOT_ZERO - Static variable in class mcc.mccjna.MCCConstants
 
BITCCHANRANGE - Static variable in class mcc.mccjna.MCCConstants
 
BITCCHANTYPE - Static variable in class mcc.mccjna.MCCConstants
 
BITCCJCSTATE - Static variable in class mcc.mccjna.MCCConstants
 
BITCFWVERSION - Static variable in class mcc.mccjna.MCCConstants
 
BITCGLOBALAVG - Static variable in class mcc.mccjna.MCCConstants
 
bitDepth - Variable in class Acquisition.FileInputParameters
 
BITDEPTHS - Static variable in class SoundRecorder.RecorderSettings
Allowable bit depths.
BITEMPAVG - Static variable in class mcc.mccjna.MCCConstants
 
BITEMPMODE - Static variable in class mcc.mccjna.MCCConstants
 
BITEMPREJFREQ - Static variable in class mcc.mccjna.MCCConstants
 
BITEMPSCALE - Static variable in class mcc.mccjna.MCCConstants
 
BITERMCOUNTSTATBIT - Static variable in class mcc.mccjna.MCCConstants
 
BITRIGEDGE - Static variable in class mcc.mccjna.MCCConstants
 
BITRIGPOLARITY - Static variable in class mcc.mccjna.MCCConstants
 
bitSet2Array(BitSet, int) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtMAT.MHTAlgorithmMAT
Convert a BitSet to a boolean array.
bitSetString(BitSet, int) - Static method in class clickTrainDetector.clickTrainAlgorithms.mht.MHTKernel
Print bit set.
bitsPerSecond - Variable in class alarm.actions.serial.AlarmSerialSettings
 
bitsPerSecondList - Variable in class NMEA.NMEAParametersDialog
 
BITUSEDFORALARM - Static variable in class mcc.mccjna.MCCConstants
 
BITUSEDFORTERMINALCOUNTSTATUS - Static variable in class mcc.mccjna.MCCConstants
 
BIUSERDEVID - Static variable in class mcc.mccjna.MCCConstants
 
BIUSERDEVIDNUM - Static variable in class mcc.mccjna.MCCConstants
 
BIUSESEXPS - Static variable in class mcc.mccjna.MCCConstants
 
BIWAITSTATE - Static variable in class mcc.mccjna.MCCConstants
 
BIWAITSTATEP1 - Static variable in class mcc.mccjna.MCCConstants
 
BIWAITSTATEP2 - Static variable in class mcc.mccjna.MCCConstants
 
BlackFishCluster - Class in qa.generator.clusters
 
BlackFishCluster() - Constructor for class qa.generator.clusters.BlackFishCluster
 
blackman(int) - Static method in class Spectrogram.WindowFunction
 
BLACKMAN - Static variable in class Spectrogram.WindowFunction
 
blackmanharris(int) - Static method in class Spectrogram.WindowFunction
 
BLACKMANHARRIS - Static variable in class Spectrogram.WindowFunction
 
blend(Color, Color) - Static method in class dataPlotsFX.data.RawWavePlotManager
 
BLOCK_COUNT - Static variable in class generalDatabase.CreateMapInfo
 
BLOCKBYFILE - Enum constant in enum class PamguardMVC.blockprocess.BlockMode
 
BLOCKED - Enum constant in enum class PamguardMVC.blockprocess.BlockMode
 
BLOCKEND - Enum constant in enum class PamguardMVC.blockprocess.BlockState
 
BLOCKFIRST - Enum constant in enum class PamguardMVC.blockprocess.BlockMode
 
BLOCKIO - Static variable in class mcc.mccjna.MCCConstants
 
blockLengthMillis - Variable in class PamguardMVC.blockprocess.PamBlockParams
 
blockMode - Variable in class PamguardMVC.blockprocess.PamBlockParams
 
BlockMode - Enum Class in PamguardMVC.blockprocess
Possible blocking modes, none, always blocked, each processed independently, block the first block to get the background then continue as normal, or reverse the first block, then continue as normal.
blockModes - Static variable in class gpl.GPLProcess
 
blockNum - Variable in class PamUtils.MapContourValues
 
blockParams - Variable in class gpl.GPLParameters
Params controlling blocking of data
BLOCKSTART - Enum constant in enum class PamguardMVC.blockprocess.BlockState
 
BlockState - Enum Class in PamguardMVC.blockprocess
 
BlockTimeStamp - Class in likelihoodDetectionModule.normalizer
This is a convenience class which stores the critical non-static information about the data blocks being processed.
BlockTimeStamp(long, int, long, long, int) - Constructor for class likelihoodDetectionModule.normalizer.BlockTimeStamp
 
BLOfflineTask - Class in bearinglocaliser.offline
 
BLOfflineTask(BearingLocaliserControl) - Constructor for class bearinglocaliser.offline.BLOfflineTask
 
BLUE - Enum constant in enum class PamView.ColourArray.ColourArrayType
 
BLUE - Enum constant in enum class pamViewFX.fxNodes.utilsFX.ColourArray.ColourArrayType
 
BLUE_WHALE - Enum constant in enum class rawDeepLearningClassifier.layoutFX.exampleSounds.ExampleSoundFactory.ExampleSoundType
 
BLUETOOTH_IFC - Static variable in class mcc.mccjna.DaqDeviceDescriptor
 
BlueWhaleD - Class in simulatedAcquisition.sounds
 
BlueWhaleD() - Constructor for class simulatedAcquisition.sounds.BlueWhaleD
 
BMCONTINUOUSCOUNT - Static variable in class mcc.mccjna.MCCConstants
 
boardIndex - Variable in class mcc.mccacquisition.MCCDaqParams
 
boardIndexToNumber(int) - Static method in class mcc.mccjna.MCCUtils
Turn a board index (0 to ...) to a board number.
BOARDINFO - Static variable in class mcc.mccjna.MCCConstants
 
BOARDNAMELEN - Static variable in class mcc.mccjna.MCCConstants
 
BOARDNOTEXIST - Static variable in class mcc.mccjna.MCCConstants
 
boardNumber - Variable in class ArrayAccelerometer.ArrayAccelParams
Really the board index - need to handle this in the code.
BOARDNUMINUSE - Static variable in class mcc.mccjna.MCCConstants
 
boardRange - Variable in class ArrayAccelerometer.ArrayAccelParams
 
BOAT - Enum constant in enum class clickTrainDetector.classification.templateClassifier.DefualtSpectrumTemplates.SpectrumTemplateType
 
bodcURL - Static variable in class Map.gridbaselayer.GridbaseControl
 
bodePlot - Variable in class dbht.DbHtDialog
 
BooleanCtrlColPanel - Class in loggerForms.formdesign.itempanels
 
BooleanCtrlColPanel(ControlTitle, UDColName) - Constructor for class loggerForms.formdesign.itempanels.BooleanCtrlColPanel
 
BooleanPanel - Class in loggerForms.formdesign.propertypanels
 
BooleanPanel(FormEditor, PropertyTypes, String) - Constructor for class loggerForms.formdesign.propertypanels.BooleanPanel
 
bootStrapN - Variable in class group3dlocaliser.algorithm.hyperbolic.HyperbolicParams
Number of iterations to calculate error.
bootStrapN - Variable in class Localiser.algorithms.timeDelayLocalisers.hyperbolic.HyperbolicParams
Number of iterations to calculate error.
BORDER - Enum constant in enum class PamView.PamColors.PamColor
 
BORDER - Enum constant in enum class pamViewFX.fxNodes.PamColorsFX.PamColor
 
BorderPaneFX2AWT - Class in pamViewFX.fxNodes.utilityPanes
 
BorderPaneFX2AWT(JDialog) - Constructor for class pamViewFX.fxNodes.utilityPanes.BorderPaneFX2AWT
 
BOSymbolChooser - Class in beamformer.plot
 
BOSymbolChooser() - Constructor for class beamformer.plot.BOSymbolChooser
 
BOTH - Enum constant in enum class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.BearingChi2VarParams.BearingJumpDrctn
 
BOTH - Static variable in class PamView.panel.VerticalLayout
The horizontal alignment constant that designates stretching the component horizontally.
BOTH_SIDES - Static variable in class Layout.PamAxis
 
BOTH_SIDES - Static variable in class pamViewFX.fxNodes.pamAxis.PamAxisFX
 
BOTTOM - Static variable in class PamView.panel.VerticalLayout
The anchoring constant that designates anchoring to the bottom of the display area
BOTTOMBAR - Enum constant in enum class PamView.chart.SeriesType
 
boundingRectangle - Variable in class userDisplay.UserFrameParameters
 
BrainBoxDevices - Class in analoginput.brainboxes
 
BrainBoxDevices(AnalogDevicesManager, SettingsNameProvider, AnalogSensorUser) - Constructor for class analoginput.brainboxes.BrainBoxDevices
 
BrainBoxParams - Class in analoginput.brainboxes
 
BrainBoxParams() - Constructor for class analoginput.brainboxes.BrainBoxParams
 
BranchedChirp - Class in simulatedAcquisition.sounds
 
BranchedChirp(double, double, double, double, double) - Constructor for class simulatedAcquisition.sounds.BranchedChirp
 
BRIDGE_FULL - Static variable in class mcc.mccjna.MCCConstants
 
BRIDGE_HALF - Static variable in class mcc.mccjna.MCCConstants
 
BRIDGE_QUARTER - Static variable in class mcc.mccjna.MCCConstants
 
brighten(Color, int) - Static method in class Spectrogram.SpectrogramHidingPanel
 
browseDatabases(Component) - Method in class generalDatabase.DBControl
 
browseDatabases(Component) - Method in class generalDatabase.DBSystem
 
browseDatabases(Component) - Method in class generalDatabase.MSAccessSystem
 
browseDatabases(Component) - Method in class generalDatabase.ServerBasedSystem
 
browseDatabases(Component) - Method in class generalDatabase.sqlite.SqliteSystem
 
browseDatabases(Component) - Method in class generalDatabase.sqlServerExpress.SQLServerSystem
 
browseDatabases(Component) - Method in class generalDatabase.ucanAccess.UCanAccessSystem
 
browseDatabasesFX(int) - Method in class generalDatabase.DBSystem
Browse for databases using an FX dialog.
browseDatabasesFX(int) - Method in class generalDatabase.MSAccessSystem
 
browseDatabasesFX(int) - Method in class generalDatabase.ServerBasedSystem
 
browseDatabasesFX(int) - Method in class generalDatabase.sqlite.SqliteSystem
FX methods to browse for an sqlite file.
browseDatabasesFX(int) - Method in class generalDatabase.sqlServerExpress.SQLServerSystem
 
browseDatabasesFX(int) - Method in class generalDatabase.ucanAccess.UCanAccessSystem
 
browseDirectories() - Method in class clickDetector.dialogs.ClickStorageOptionsDialog
 
browseFiles() - Method in class clickDetector.dialogs.ClickAlarmDialog
Allow the user to select a wav file
BScan - Class in difar
DIFAR Calculations, based on the Matlab bScanNew functions
BScan(DifarControl, double[][], int, int, float, double[], int, DifarParameters.DifarOutputTypes, DifarProcess.DifarDemuxWorker) - Constructor for class difar.BScan
 
BTAmplitudeSelector - Class in clickDetector
 
BTAmplitudeSelector(ClickControl, ClickBTDisplay) - Constructor for class clickDetector.BTAmplitudeSelector
 
BTDisplayParameters - Class in clickDetector
 
BTDisplayParameters() - Constructor for class clickDetector.BTDisplayParameters
 
BTHCONNECTIONFAILED - Static variable in class mcc.mccjna.MCCConstants
 
BTOverlayMarker - Class in clickDetector
 
BTOverlayMarker(ClickBTDisplay, Object, int) - Constructor for class clickDetector.BTOverlayMarker
 
BTProjector - Class in clickDetector
 
BTProjector(ClickBTDisplay) - Constructor for class clickDetector.BTProjector
 
BubbleSort - Class in PamUtils
Class to sort indexes, leaving original data intact.
BubbleSort() - Constructor for class PamUtils.BubbleSort
 
budgetPeriodHours - Variable in class clipgenerator.ClipGenSetting
Budget period in hours.
bufferCheck(double, double) - Method in class dataPlotsFX.clickPlotFX.ScrollingImageSegmenter
Check the writable images and remove fringe images if necessary.
bufferCheck(double, double) - Method in class dataPlotsFX.clickPlotFX.ScrollingPlotSegmenter
Check the writable images and remove fringe images if necessary.
BufferedSQLLogging - Class in generalDatabase
Version of SQLLogging which buffers up the data units for a few seconds before writing them so that other parts of PAMguard get a chance to modify them before they go into the database.
BufferedSQLLogging(PamDataBlock, int) - Constructor for class generalDatabase.BufferedSQLLogging
 
bufferLength - Variable in class SoundRecorder.RecorderSettings
Length of the buffered data to store
bufferMillis - Variable in class annotation.calcs.snr.SNRAnnotationParameters
Buffer between both the start and end of the sound being measured and the noise measurement period
BufferPanel() - Constructor for class rawDeepLearningClassifier.dlClassification.orcaSpot.OrcaSpotSidePanel.BufferPanel
 
BufferPanel(int) - Constructor for class clickTrainDetector.layout.mht.MHTSidePaneSwing.BufferPanel
 
buildAxes(double) - Method in class Array.layoutFX.Array3DPane
Create a 3D axis with default colours set.
buildAxes(double, Color, String, String, String, Color) - Static method in class pamViewFX.threeD.Utils3D
 
buildAxes(double, Color, Color, Color, Color, Color, Color, Color) - Method in class Array.layoutFX.Array3DPane
Create a 3D axis.
buildAxes(double, Color, Color, Color, Color, Color, Color, Color) - Static method in class pamViewFX.threeD.Utils3D
 
buildAxes(double, Color, Color, Color, Color, Color, Color, Color, String, String, String) - Static method in class pamViewFX.threeD.Utils3D
Create a 3D axis.
buildCamera() - Method in class map3D.fx.CameraControl
 
buildDatabaseUrl(String, int, String) - Method in class generalDatabase.MySQLSystem
 
buildDatabaseUrl(String, int, String) - Method in class generalDatabase.postgresql.PostgreSQLSystem
 
buildDatabaseUrl(String, int, String) - Method in class generalDatabase.ServerBasedSystem
 
BuildSineArray() - Static method in class cpod.FPODReader
 
BuoyCalibration - Class in difar
used to store and process information about each buoy.
BuoyCalibration(DifarControl, int) - Constructor for class difar.BuoyCalibration
 
BuoyCalibration(DifarControl, long, LatLong, int) - Constructor for class difar.BuoyCalibration
 
buoyDataBlock - Variable in class difar.SonobuoyManager
 
BuoyDataSerialiser - Class in networkTransfer.receive
Clas for saving buoystatus data into the serialised settings.
BuoyDataSerialiser(NetworkReceiver) - Constructor for class networkTransfer.receive.BuoyDataSerialiser
 
buoyEndButton() - Method in class difar.display.DifarActionsVesselPanel
 
BuoyStatusData - Class in networkTransfer.receive
Separate out from BuoyStatusDataunit so that it can be serialized
BuoyStatusData(int, int, int) - Constructor for class networkTransfer.receive.BuoyStatusData
 
BuoyStatusDataBlock - Class in networkTransfer.receive
 
BuoyStatusDataBlock(PamProcess) - Constructor for class networkTransfer.receive.BuoyStatusDataBlock
 
BuoyStatusDataUnit - Class in networkTransfer.receive
Class for collecting data to do with individual buoys receiving data over the network.
BuoyStatusDataUnit(NetworkReceiver, int, int, int) - Constructor for class networkTransfer.receive.BuoyStatusDataUnit
 
BuoyStatusDataUnit(NetworkReceiver, BuoyStatusData) - Constructor for class networkTransfer.receive.BuoyStatusDataUnit
 
BuoyStatusLogging - Class in networkTransfer.receive
 
BuoyStatusLogging(NetworkReceiver, PamDataBlock) - Constructor for class networkTransfer.receive.BuoyStatusLogging
 
BuoyStatusValue - Class in networkTransfer.receive
 
BuoyStatusValue(long, Serializable) - Constructor for class networkTransfer.receive.BuoyStatusValue
 
BuoyStatusValue(Serializable) - Constructor for class networkTransfer.receive.BuoyStatusValue
 
BURSTIO - Static variable in class mcc.mccjna.MCCConstants
 
BURSTMODE - Static variable in class mcc.mccjna.MCCConstants
 
BusyLayeredPane - Class in PamView
 
BusyLayeredPane(JLayeredPane) - Constructor for class PamView.BusyLayeredPane
 
BUTTERWORTH - Enum constant in enum class Filters.FilterType
 
ButterworthMethod - Class in Filters
 
ButterworthMethod(double, FilterParams) - Constructor for class Filters.ButterworthMethod
 
BUTTON_AUTO - Static variable in interface SoundRecorder.RecorderView
 
BUTTON_OFF - Static variable in interface SoundRecorder.RecorderView
 
BUTTON_SIZE - Static variable in class pamViewFX.PamLauncherPane
 
BUTTON_START - Static variable in class PamController.PamController
 
BUTTON_START - Static variable in interface SoundRecorder.RecorderView
 
BUTTON_START_BUFFERED - Static variable in interface SoundRecorder.RecorderView
 
BUTTON_STOP - Static variable in class PamController.PamController
 
BUTTONFACE - Enum constant in enum class PamView.PamColors.PamColor
 
BUTTONFACE - Enum constant in enum class pamViewFX.fxNodes.PamColorsFX.PamColor
 
buttonWidthStandard - Static variable in interface dataPlotsFX.overlaymark.menuOptions.OverlayMenuItem
 
BW - Static variable in class cpod.dataSelector.StandardCPODFilterParams
The bandwidth value
BW - Variable in class cpod.FPODReader.FPODdata
 
BW10DB - Enum constant in enum class rocca.RoccaContourStats.ParamIndx
 
BW10DBHIGH - Enum constant in enum class rocca.RoccaContourStats.ParamIndx
 
BW10DBLOW - Enum constant in enum class rocca.RoccaContourStats.ParamIndx
 
BW3DB - Enum constant in enum class rocca.RoccaContourStats.ParamIndx
 
BW3DBHIGH - Enum constant in enum class rocca.RoccaContourStats.ParamIndx
 
BW3DBLOW - Enum constant in enum class rocca.RoccaContourStats.ParamIndx
 
BWaddon - Variable in class cpod.FPODReader.FPODHeader
 
ByteConverter - Class in wavFiles
Classes to convert between various wav and aif stream formats and double data scaled from -1 to +1 for PAMGUARD.
ByteConverter() - Constructor for class wavFiles.ByteConverter
 
ByteConverterAifInt16 - Class in wavFiles
 
ByteConverterAifInt16() - Constructor for class wavFiles.ByteConverterAifInt16
 
ByteConverterAifInt24 - Class in wavFiles
 
ByteConverterAifInt24() - Constructor for class wavFiles.ByteConverterAifInt24
 
ByteConverterAifInt32 - Class in wavFiles
 
ByteConverterAifInt32() - Constructor for class wavFiles.ByteConverterAifInt32
 
ByteConverterAifInt8 - Class in wavFiles
 
ByteConverterAifInt8() - Constructor for class wavFiles.ByteConverterAifInt8
 
ByteConverterFloat32 - Class in wavFiles
 
ByteConverterFloat32() - Constructor for class wavFiles.ByteConverterFloat32
 
ByteConverterWavInt16 - Class in wavFiles
 
ByteConverterWavInt16() - Constructor for class wavFiles.ByteConverterWavInt16
 
ByteConverterWavInt24 - Class in wavFiles
 
ByteConverterWavInt24() - Constructor for class wavFiles.ByteConverterWavInt24
 
ByteConverterWavInt32 - Class in wavFiles
 
ByteConverterWavInt32() - Constructor for class wavFiles.ByteConverterWavInt32
 
ByteConverterWavInt8 - Class in wavFiles
 
ByteConverterWavInt8() - Constructor for class wavFiles.ByteConverterWavInt8
 
bytesToDouble(byte[], double[][], int) - Method in class wavFiles.ByteConverter
Converts a byte array into a double array.
bytesToDouble(byte[], double[][], int) - Method in class wavFiles.ByteConverterAifInt16
 
bytesToDouble(byte[], double[][], int) - Method in class wavFiles.ByteConverterAifInt24
 
bytesToDouble(byte[], double[][], int) - Method in class wavFiles.ByteConverterAifInt32
 
bytesToDouble(byte[], double[][], int) - Method in class wavFiles.ByteConverterAifInt8
 
bytesToDouble(byte[], double[][], int) - Method in class wavFiles.ByteConverterFloat32
 
bytesToDouble(byte[], double[][], int) - Method in class wavFiles.ByteConverterWavInt16
 
bytesToDouble(byte[], double[][], int) - Method in class wavFiles.ByteConverterWavInt24
 
bytesToDouble(byte[], double[][], int) - Method in class wavFiles.ByteConverterWavInt32
 
bytesToDouble(byte[], double[][], int) - Method in class wavFiles.ByteConverterWavInt8
 
bytesToSamples(byte[], long, int, AudioFormat) - Static method in class Acquisition.FileInputSystem
Format one channel of the data in a byte array into a sample array.
BYTEXFER - Static variable in class mcc.mccjna.MCCConstants
 
ByValue() - Constructor for class mcc.mccjna.DaqDeviceDescriptor.ByValue
 

C

c - Variable in class PamView.hidingpanel.TabbedHidingPane.ShowingPanel
 
C_COMPARE - Static variable in class mcc.mccjna.MCCConstants
 
C_ERROR - Enum constant in enum class nidaqdev.networkdaq.CRioErrorStrings
 
C_ERROR - Static variable in class mcc.mccjna.MCCConstants
 
C_INDEX - Static variable in class mcc.mccjna.MCCConstants
 
C_OVERFLOW - Static variable in class mcc.mccjna.MCCConstants
 
C_SIGN - Static variable in class mcc.mccjna.MCCConstants
 
C_UNDERFLOW - Static variable in class mcc.mccjna.MCCConstants
 
C_UP_DOWN - Static variable in class mcc.mccjna.MCCConstants
 
C0 - Static variable in class JSSHTerminal.TextTerminal
 
CAL_TAB - Static variable in class videoRangePanel.layoutAWT.VRParametersDialog
 
CAL_TABLE_FACTORY - Static variable in class mcc.mccjna.MCCConstants
 
CAL_TABLE_FIELD - Static variable in class mcc.mccjna.MCCConstants
 
calc(boolean, int, int, double[], double, double, double, int, double, double[], int, double, int) - Method in class IshmaelLocator.LM
See the long comment for the LM class for details.
calc_simple(boolean, int, int, double, double[]) - Method in class IshmaelLocator.LM
Run the Levenberg-Marquardt method using reasonable guesses for many of the input parameters.
CALC_TAB - Static variable in class videoRangePanel.layoutAWT.VRParametersDialog
 
calcAborption(double[], double, double) - Method in class propagation.Absorption
Absorption coefficient in seawater in dB/m
After Kinsler and Frey pp.
calcAborption(double, double, double) - Method in class propagation.Absorption
Absorption coefficient in seawater in dB/m
After Kinsler and Frey pp.
calcAnimalBearing(double, Point, Point, double) - Static method in class videoRangePanel.vrmethods.landMarkMethod.VRLandMarkMethod
Calculates the bearing of the target animal based on a landmark point, the animal location and a calibration value;
calcAnimalPitch(double, Point, Point, double) - Static method in class videoRangePanel.vrmethods.landMarkMethod.VRLandMarkMethod
Calculates the pitch of the target animal based on a landmark point, the animal location and a calibration value;
calcBearingDiffAnimal(double, Point, Point) - Static method in class videoRangePanel.vrmethods.landMarkMethod.VRLandMarkMethod
Calculates the bearing of the animal in pixels
calcChi2(SnapshotGeometry, TOADInformation, double[]) - Method in class group3dlocaliser.algorithm.toadbase.TOADBaseAlgorithm
Calculate a chi2 value for the given geometry and set of delays.
calcChi2(ArrayList<PamDataUnit>, IDIManager) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.IDIChi2
 
calcChi2(ArrayList<PamDataUnit>, IDIManager) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.SimpleChi2Var
 
calcChi2(ArrayList<T>, IDIManager) - Method in interface clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.MHTChi2Var
Calculate the chi2 value for a particular variable from a list of data units in a track.
calcCorrelationMatch(ComplexArray, float) - Method in class matchedTemplateClassifer.MTClassifier
Calculate a value for the click reject and match template ration correlation
calcCorrelationMatchTest(ComplexArray, float) - Method in class matchedTemplateClassifer.MTClassifier
Tests the correlation function by outputting data to .mat file.
calcCSDM() - Method in class PamUtils.complex.ComplexArray
Calculate the Cross-Spectral Density Matrix (CSDM) from this complex array.
calcDeltaChi2(double[], double[], double) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.TimeDelayChi2Delta
Calculate the chi2 for two different delta values.
calcDeltaChi2(double, double, double) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.AmplitudeChi2
 
calcDeltaChi2(double, double, double) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.BearingChi2Delta
 
calcDeltaChi2(double, double, double) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.SimpleChi2VarDelta
Calculate the chi2 for two different delta values.
calcDivisor() - Method in class dataPlotsFX.data.TDScaleInfo
Automatically calculate the unit divisor.
calcErrorEllipse(double[][]) - Method in class Localiser.algorithms.locErrors.ErrorEllipse
Calculate the error for a set of points.
calcErrors - Variable in class group3dlocaliser.algorithm.hyperbolic.HyperbolicParams
Calculates errors from a random distribution of time delay errors
calcErrors - Variable in class Localiser.algorithms.timeDelayLocalisers.hyperbolic.HyperbolicParams
Calculates errors from a random distribution of time delay errors
calcErrors(ArrayList<Double>, ArrayList<Double>, ArrayList<Point3f>, double, int) - Method in class Localiser.algorithms.timeDelayLocalisers.hyperbolic.Hyperbolic
Calculate the errors in source position.
calcErrors(GroupLocResult, PamDataUnit, SnapshotGeometry, TOADInformation, HyperbolicParams) - Method in class group3dlocaliser.algorithm.hyperbolic.HyperbolicLocaliser
Calculate and add the errors in source position.
calcErrors(PamDataUnit, SnapshotGeometry, TOADInformation, HyperbolicParams) - Method in class group3dlocaliser.algorithm.hyperbolic.HyperbolicLocaliser
Calculate the errors in source position.
calcFilter(double[], double) - Method in class clickDetector.layoutFX.ClickTriggerGraph
 
calcFreq(int) - Static method in class noiseBandMonitor.BandData
 
calcFrequencyRangeDisplay() - Method in class dataPlotsFX.spectrogramPlotFX.FFTPlotInfo
Checks the frequency range range to be displayed.
calcFrequencyRangeDisplay() - Method in class Spectrogram.SpectrogramDisplay
Checks the frequency range range to be displayed.
calcHydrophoneNumber(int) - Static method in class PamUtils.PamUtils
For N synchronised hydrophones there are N*(N-1)/2 time delays.
calcLocLatLong(VRMeasurement) - Method in class videoRangePanel.vrmethods.AbstractVRMethod
Calculates the lat long of an animal based on heading, range and the image origin.
calcLogLikelihood(SnapshotGeometry, TOADInformation, double[]) - Method in class group3dlocaliser.algorithm.toadbase.TOADBaseAlgorithm
Calculate a Log Likelihood value for the given geometry and set of delays.
calcMinMaxAng() - Method in class clickTrainDetector.CTDetectionGroupDataUnit
Calculate the minimum and maximum angle of the whole click train.
calcPeakContourWidths(ConnectedRegionDataUnit) - Static method in class export.MLExport.MLWhistleMoanExport
Calculate summary contour information to allow people to conveniently plot whisltle data
calcPerpPoint(double, double, Point) - Static method in class videoRangePanel.vrmethods.landMarkMethod.VRLandMarkMethod
Calculates the point at which the perpendicular corner of the pitch/bearing triangle resides.
calcPerpPoint(double, Point, Point, LandMark, LandMark, LatLong) - Method in class videoRangePanel.vrmethods.landMarkMethod.VRLandMarkMethod
Calculates location of the perpendicular vertex of the triangle defined by landmarks 1 and 2, with the side of the triangle following the tilt of the picture.
calcPitch(LandMark, LatLong) - Static method in class videoRangePanel.vrmethods.landMarkMethod.VRLandMarkMethod
Calculate the pitch between a landMark and image location.
calcPitchDiffAnimal(double, Point, Point) - Static method in class videoRangePanel.vrmethods.landMarkMethod.VRLandMarkMethod
Calculates the pitch of the animal in pixels
calcProcessModel() - Method in class dataModelFX.connectionNodes.ModuleProcessDiagram
Figure out the process chains.
calcSnapshotGeometry() - Method in class clickDetector.ClickDetection
 
calcSnapshotGeometry() - Method in class PamguardMVC.PamDataUnit
 
calcSource(ArrayList<Double>, ArrayList<Point3f>, double) - Method in class Localiser.algorithms.timeDelayLocalisers.hyperbolic.Hyperbolic
Calculate the position of a source from time delays.
calcSpectrogram(double[][], int, int, int) - Method in class clipgenerator.ClipSpectrogram
Calculate the click spectrum for all channels.
calcStartSample() - Method in class clickTrainDetector.CTDetectionGroupDataUnit
Calculate a valid start sample.
calcStreamerPath(TargetMotionInformation, long, long, TMManager.TMInfoWorker) - Static method in class targetMotionModule.TargetMotionControl
Calculate the path of all streamers over the loaded GPS data.
calcStreamerPath(TMManager.TMInfoWorker) - Method in class targetMotionModule.TargetMotionControl
Calculate the path of all streamers over the loaded GPS data.
calcSummaryUnits(CTSelectParams) - Method in class clickTrainDetector.CTDetectionGroupDataUnit
Update the data unit list.
calcTDHyperboloid(double, double, double, float, float, int) - Static method in class Localiser.algorithms.TDHyperboleUtils
Calculates a series of points for the hyperboloid defined by a time delay and between two hydrophones separated by hDistance;
calcTDHyperboloid(double, double, double, float, float, int) - Static method in class Localiser.algorithms.timeDelayLocalisers.hyperbolic.TDHyperboleUtils
Calculates a series of points for the hyperboloid defined by a time delay and between two hydrophones separated by hDistance;
calcTDNumber(int) - Static method in class PamUtils.PamUtils
For N synchronised hydrophones there are N*(N-1)/2 time delays.
calcTilt(Point, Point, double, double) - Static method in class videoRangePanel.vrmethods.landMarkMethod.VRLandMarkMethod
Calculates the tilt of the image based on two landmarks selected on that image and the known angles between those landmarks.
calcTilt(Point, Point, LandMark, LandMark, LatLong) - Static method in class videoRangePanel.vrmethods.landMarkMethod.VRLandMarkMethod
 
calcTime(PamDataUnit, PamDataUnit) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.IDIManager
Calculate the time between two data units
calcTimeDelays(double[], ArrayList<ArrayList<double[]>>, double) - Static method in class Localiser.algorithms.genericLocaliser.Chi2TimeDelays
Calculate the theoretical time delays if a source was located at position in space.
calcTimeSeriesData(List<PamDataUnit<?, ?>>) - Method in class clickTrainDetector.IDIInfo
 
calcTimeSR(PamDataUnit, PamDataUnit) - Method in class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.IDIManager
Calculate the time between two data units
calcTMDetectionInfo(ArrayList<PamDataUnit>, TargetMotionLocaliserProvider) - Method in class targetMotionModule.TargetMotionControl
Calculates the targetMotiojnInfo for a set of detections.
calculate(double[]) - Method in class likelihoodDetectionModule.spectralEti.SpectralBand
Calculates the energy in the given band.
calculateAmplitude(int) - Method in class clickDetector.ClickDetection
Calculate the peak waveform amplitude making the correction of rotating the wave so it's two ends are at zero.
calculateArch() - Static method in class PamUtils.PlatformInfo
 
calculateBeamPattern() - Method in class beamformer.algorithms.BeamAlgoParamsPane.BeamInfo
Based on concepts from Matlab code delay-and-sum.zip
calculateBearing() - Method in class whistleDetector.WhistleLocalisation
 
calculateClickStats() - Method in class rocca.RoccaContourDataBlock
Calculate the statistics specific to a click detection
calculateClickTimeParams() - Method in class rocca.RoccaSightingDataUnit
serialVersionUID=22 2015/06/23 added function to calculate time params on clicks Calculate sighting parameters based on time data.
calculateDifarGain() - Method in class difar.DifarDataUnit
Now also work out the DIFAR gain for that angle.
calculateDifarGain(Double, Double) - Method in class difar.DifarDataUnit
Calculate teh DIFAR gain for a given angle and frequency
calculateFilter() - Method in class Filters.FIRArbitraryFilter
 
calculateFilterThings(double) - Method in class dbht.DbHtParameters
 
calculateGroupDelays(double) - Method in class group3dlocaliser.grouper.DetectionGrouper
 
calculateHorizonTilt() - Method in class videoRangePanel.vrmethods.AbstractVRMethod
Gets called when a second horizon point is added and then calculates the horizon tilt, based on the two points.
calculateInsets(Graphics) - Method in class PamView.chart.swing.SwingChartRenderer
 
calculateInsets(Graphics) - Method in class qa.chart.swing.QASwingChartRenderer
 
calculateOmegaValues() - Method in class Filters.IIRFilterMethod
 
calculateOpacity(long, long, long) - Method in class Map.MapDrawingOptions
work out how opaque the lines should be.
calculateOS() - Static method in class PamUtils.PlatformInfo
 
calculatePerformance() - Method in class noiseBandMonitor.BandAnalyser
 
calculateRMSAmplitude() - Method in class whistlesAndMoans.ConnectedRegion
 
calculateSEL(OneBandDataUnit, int) - Method in class noiseOneBand.OneBandProcess
Calculate SEL and add it to a data unit.
calculateStatistics() - Method in class rocca.RoccaContourDataBlock
Once the Datablock is filled, this routine will calculate the statistics of the contour.
calculateTrueSampleRate(DaqStatusDataUnit) - Method in class Acquisition.DaqStatusDataUnit
 
calculateWeights() - Method in class beamformer.algorithms.BeamAlgoParamsPane.BeamInfo
 
calculateWhistleTimeParams() - Method in class rocca.RoccaSightingDataUnit
Calculate sighting parameters based on time data.
calcVals() - Method in class videoRangePanel.vrmethods.landMarkMethod.VRLandMarkMethod
Calculate the mean pixels per degree and the tilt of the mean tilt of the image based on the set landmarks.
calDocumentExists(String) - Method in class tethys.calibration.CalibrationHandler
See if a document already exists.
CalendarControl - Class in PamUtils.time
 
CalFileReader - Class in d3.calibration
 
calibrate(AcquisitionSettings, int) - Method in class likelihoodDetectionModule.TargetConfiguration
Calibrate the TargetConfiguration against the supplied audio source parameters (the AcquisitionSettings) and the channel map.
calibrate(AcquisitionSettings, LikelihoodFFTParameters) - Method in class likelihoodDetectionModule.GuardBand
Calibrate the guard band with the audio source parameters (acquisition) and the FFT parameters.
calibrate(AcquisitionSettings, LikelihoodFFTParameters) - Method in class likelihoodDetectionModule.SignalBand
Calibrates the SignalBand according to the supplied audio data source (acquisition) and FFT parameters.
CALIBRATE_1 - Static variable in class videoRangePanel.vrmethods.calibration.AddCalibrationMethod
 
CALIBRATE_2 - Static variable in class videoRangePanel.vrmethods.calibration.AddCalibrationMethod
 
CALIBRATEDATA - Static variable in class mcc.mccjna.MCCConstants
 
Calibration_FrequencyResponse - Static variable in class tethys.tooltips.TethysTips
 
Calibration_Id - Static variable in class tethys.tooltips.TethysTips
 
Calibration_IntensityReference_uPa - Static variable in class tethys.tooltips.TethysTips
 
Calibration_MetadataInfo - Static variable in class tethys.tooltips.TethysTips
 
Calibration_MetadataInfo_Contact - Static variable in class tethys.tooltips.TethysTips
 
Calibration_MetadataInfo_Contact_contactInfo_onlineResource - Static variable in class tethys.tooltips.TethysTips
 
Calibration_MetadataInfo_Date - Static variable in class tethys.tooltips.TethysTips
 
Calibration_MetadataInfo_UpdateFrequency - Static variable in class tethys.tooltips.TethysTips
 
Calibration_Process - Static variable in class tethys.tooltips.TethysTips
 
Calibration_Process_Method - Static variable in class tethys.tooltips.TethysTips
 
Calibration_Process_Parameters - Static variable in class tethys.tooltips.TethysTips
 
Calibration_Process_Software - Static variable in class tethys.tooltips.TethysTips
 
Calibration_Process_SupportSoftware - Static variable in class tethys.tooltips.TethysTips
 
Calibration_Process_SupportSoftware_Parameters - Static variable in class tethys.tooltips.TethysTips
 
Calibration_Process_SupportSoftware_Version - Static variable in class tethys.tooltips.TethysTips
 
Calibration_Process_Version - Static variable in class tethys.tooltips.TethysTips
 
Calibration_QualityAssurance_AlternateCalibration - Static variable in class tethys.tooltips.TethysTips
 
Calibration_QualityAssurance_Quality - Static variable in class tethys.tooltips.TethysTips
 
Calibration_ResponsibleParty - Static variable in class tethys.tooltips.TethysTips
 
Calibration_ResponsibleParty_contactInfo_onlineResource - Static variable in class tethys.tooltips.TethysTips
 
Calibration_Sensitivity_dBFS - Static variable in class tethys.tooltips.TethysTips
 
Calibration_Sensitivity_dBV - Static variable in class tethys.tooltips.TethysTips
 
Calibration_Sensitivity_V - Static variable in class tethys.tooltips.TethysTips
 
Calibration_TimeStamp - Static variable in class tethys.tooltips.TethysTips
 
Calibration_Type - Static variable in class tethys.tooltips.TethysTips
 
CALIBRATION_USE_MEAN - Static variable in class difar.DifarParameters
 
CALIBRATION_USE_MODE - Static variable in class difar.DifarParameters
Choices for calibration dialog when user right clicks and / or new data arrive.
calibrationChoice - Variable in class difar.DifarParameters
 
CalibrationClip - Static variable in class difar.DifarParameters
 
calibrationData - Variable in class videoRangePanel.VRMeasurement
Camera calibration data.
CalibrationData - Class in analoginput.calibration
Really simple calibration data class - may change at later date to be a lot more sophisticated.
CalibrationData(double[]) - Constructor for class analoginput.calibration.CalibrationData
 
CalibrationDataBlock - Class in difar.calibration
 
CalibrationDataBlock(DifarProcess) - Constructor for class difar.calibration.CalibrationDataBlock
 
CalibrationDataUnit - Class in difar.calibration
 
CalibrationDataUnit(long, long, double, double, int) - Constructor for class difar.calibration.CalibrationDataUnit
 
CalibrationDialog - Class in difar.calibration
 
CalibrationException - Exception Class in analoginput.calibration
 
CalibrationException(String) - Constructor for exception class analoginput.calibration.CalibrationException
 
CALIBRATIONFAILED - Static variable in class mcc.mccjna.MCCConstants
 
calibrationGpsSource - Variable in class difar.DifarParameters
 
CalibrationGUIAWT - Class in videoRangePanel.vrmethods.calibration
 
CalibrationGUIAWT(AddCalibrationMethod) - Constructor for class videoRangePanel.vrmethods.calibration.CalibrationGUIAWT
 
CalibrationHandler - Class in tethys.calibration
 
CalibrationHandler(TethysControl) - Constructor for class tethys.calibration.CalibrationHandler
 
CalibrationHistogram - Class in difar.calibration
Contains data for a Difar calibration histogram.
CalibrationHistogram(DifarControl, int, double) - Constructor for class difar.calibration.CalibrationHistogram
 
CalibrationInfo - Class in d3.calibration
Information for a specific calibration type.
CalibrationInfo(String) - Constructor for class d3.calibration.CalibrationInfo
 
CalibrationLogging - Class in difar.calibration
 
CalibrationLogging(DifarProcess, PamDataBlock) - Constructor for class difar.calibration.CalibrationLogging
 
calibrationMarker - Static variable in class videoRangePanel.layoutAWT.VRPanel
 
calibrationMethods - Static variable in class tethys.calibration.CalibrationHandler
 
CalibrationProcess - Class in difar.calibration
Handle the calibration process for a single channel
CalibrationProcess(DifarControl, int) - Constructor for class difar.calibration.CalibrationProcess
 
CalibrationProcessCard - Class in tethys.calibration.swing
Calibrations Process card attempts to fill in the calibration data for the Quality Assurance and Process fields.
CalibrationProcessCard(PamWizard) - Constructor for class tethys.calibration.swing.CalibrationProcessCard
 
Calibrations - Enum constant in enum class tethys.Collection
 
CalibrationsCard - Class in tethys.calibration.swing
 
CalibrationsCard(PamWizard, String) - Constructor for class tethys.calibration.swing.CalibrationsCard
 
CalibrationsContactCard - Class in tethys.calibration.swing
 
CalibrationsContactCard(PamWizard) - Constructor for class tethys.calibration.swing.CalibrationsContactCard
 
CalibrationSet - Class in d3.calibration
 
CalibrationSet(String, String, String) - Constructor for class d3.calibration.CalibrationSet
 
CalibrationsExportWizard - Class in tethys.calibration.swing
 
CalibrationsMainPanel - Class in tethys.calibration.swing
 
CalibrationsMainPanel(TethysControl, CalibrationHandler) - Constructor for class tethys.calibration.swing.CalibrationsMainPanel
 
CalibrationsTable - Class in tethys.calibration.swing
 
CalibrationsTable(TethysControl, CalibrationHandler) - Constructor for class tethys.calibration.swing.CalibrationsTable
 
calibrationSymbol - Static variable in class videoRangePanel.layoutAWT.VRPanel
 
CALIBRATIONTAB - Static variable in class videoRangePanel.layoutFX.VRSettingsPane
Flag for opening the image calibration tab.
CalibrationTableView - Class in difar.display
 
CalibrationTableView(DifarProcess) - Constructor for class difar.display.CalibrationTableView
 
callback(int, int, int, Pointer) - Method in interface mcc.mccjna.MCCJNA.MCCLibrary.EVENTCALLBACK
 
CallGranularityHandler - Class in tethys.detection
 
CallGranularityHandler(TethysControl, PamDataBlock, TethysExportParams, StreamExportParams) - Constructor for class tethys.detection.CallGranularityHandler
 
callJniGetAsioDrivers(AsioDriverInfos) - Method in class asiojni.AsioJniInterface
 
callSettings() - Method in class alarm.AlarmOfflineTask
 
callSettings() - Method in class bearinglocaliser.offline.BLOfflineTask
 
callSettings() - Method in class clickDetector.offlineFuncs.ClickDelayTask
 
callSettings() - Method in class clickDetector.offlineFuncs.ClickReClassifyTask
 
callSettings() - Method in class clickDetector.offlineFuncs.ClickTrainClass
 
callSettings() - Method in class clickDetector.offlineFuncs.EchoDetectionTask
 
callSettings() - Method in class clickTrainDetector.offline.ClickTrainOfflineTask
 
callSettings() - Method in class clickTrainDetector.offline.CTClassifierOfflineTask
 
callSettings() - Method in class crossedbearinglocaliser.offline.CBOfflineTask
 
callSettings() - Method in class dbht.offline.DbHtSummaryTask
 
callSettings() - Method in class export.swing.ExportTask
Call any task specific settings
callSettings() - Method in class group3dlocaliser.offline.Group3DOfflineTask
 
callSettings() - Method in class matchedTemplateClassifer.offline.MTClassifierOfflineTask
 
callSettings() - Method in class noiseOneBand.offline.OneBandSummaryTask
 
callSettings() - Method in class offlineProcessing.OfflineTask
Call any task specific settings
callSettings() - Method in class rawDeepLearningClassifier.offline.DLOfflineTask
 
callSettings() - Method in class whistleClassifier.offline.ReclassifyTask
 
callSign - Variable in class AIS.AISStaticData
 
calltypeConfidence - Variable in class rawDeepLearningClassifier.dlClassification.orcaSpot.OrcaSpotModelResult
The call type confidence
calMeanAnnotation - Variable in class difar.SonobuoyManager
 
calStdDevAnnotation - Variable in class difar.SonobuoyManager
 
CAMERA_POS - Static variable in class videoRangePanel.layoutAWT.VRParametersDialog
 
CameraControl - Class in map3D.fx
Class for controlling everything to do with the FX Camera observing the scene.
CameraControl(Test3DDisplayFX) - Constructor for class map3D.fx.CameraControl
 
canAnnotate(Class) - Method in class annotation.calcs.snr.SNRAnnotationType
 
canAnnotate(Class) - Method in class annotation.calcs.spl.SPLAnnotationType
 
canAnnotate(Class) - Method in class annotation.calcs.wav.WavAnnotationType
 
canAnnotate(Class) - Method in class annotation.classifier.BaseClassificationAnnotationType
 
canAnnotate(Class) - Method in class annotation.DataAnnotationType
Find out whether or not a particular type of data can be annotated
canAnnotate(Class) - Method in class annotation.dummy.DummyAnnotationType
 
canAnnotate(Class) - Method in class annotation.localise.targetmotion.TMAnnotationType
 
canAnnotate(Class) - Method in class annotation.string.StringAnnotationType
 
canAnnotate(Class) - Method in class annotation.timestamp.TimestampAnnotationType
 
canAnnotate(Class) - Method in class annotation.userforms.UserFormAnnotationType
 
canAnnotate(Class) - Method in class beamformer.annotation.BFAnnotationType
 
canAnnotate(Class) - Method in class bearinglocaliser.annotation.BearingAnnotationType
 
canAnnotate(Class) - Method in class clickDetector.ClickClassifiers.annotation.ClickClassificationType
 
canAnnotate(Class) - Method in class Localiser.algorithms.timeDelayLocalisers.bearingLoc.annotation.BearingLocAnnotationType
 
canAnnotate(Class) - Method in class matchedTemplateClassifer.annotation.MatchedClickAnnotationType
 
canAnnotate(Class) - Method in class rawDeepLearningClassifier.logging.DLAnnotationType
 
canArrayShape(int) - Method in class group3dlocaliser.algorithm.gridsearch.TOADGridSearch
 
canArrayShape(int) - Method in class group3dlocaliser.algorithm.LocaliserAlgorithm3D
Ask if the algorithm can process this type of array data.
canArrayShape(int) - Method in class group3dlocaliser.algorithm.toadsimplex.ToadSimplexLocaliser
 
canAutoAnnotate() - Method in class annotation.calcs.snr.SNRAnnotationType
 
canAutoAnnotate() - Method in class annotation.calcs.spl.SPLAnnotationType
 
canAutoAnnotate() - Method in class annotation.calcs.wav.WavAnnotationType
 
canAutoAnnotate() - Method in class annotation.DataAnnotationType
 
canAutoAnnotate() - Method in class annotation.localise.targetmotion.TMAnnotationType
 
canAutoAnnotate() - Method in class annotation.string.StringAnnotationType
 
canAutoAnnotate() - Method in class annotation.timestamp.TimestampAnnotationType
 
canAutoAnnotate() - Method in class annotation.userforms.UserFormAnnotationType
 
canAutoProcess() - Method in class difar.DifarDataUnit
Autoprocess everything except "Default" clips
canAutoSave() - Method in class difar.DifarDataUnit
//this is a bit pointless now as action performed doesn't attempt save if timer is stopped whether the difar unit has been interacted with causing autosave to be inapropriate
canBeUsed(DetectionGroupSummary, int, OverlayMark) - Method in class dataPlotsFX.clickPlotFX.ClickReclassifyMenuItem
 
canBeUsed(DetectionGroupSummary, int, OverlayMark) - Method in class dataPlotsFX.overlaymark.menuOptions.copyImage.CopyDetectionPlot
 
canBeUsed(DetectionGroupSummary, int, OverlayMark) - Method in class dataPlotsFX.overlaymark.menuOptions.copyImage.CopyTDDataPlot
 
canBeUsed(DetectionGroupSummary, int, OverlayMark) - Method in class dataPlotsFX.overlaymark.menuOptions.CSVExportOverlayMenu
 
canBeUsed(DetectionGroupSummary, int, OverlayMark) - Method in class dataPlotsFX.overlaymark.menuOptions.MLExportOverlayMenu
 
canBeUsed(DetectionGroupSummary, int, OverlayMark) - Method in interface dataPlotsFX.overlaymark.menuOptions.OverlayMenuItem
Check whether the menu item can be used within a group of data units.
canBeUsed(DetectionGroupSummary, int, OverlayMark) - Method in class dataPlotsFX.overlaymark.menuOptions.RExportOverlayMenu
 
canBeUsed(DetectionGroupSummary, int, OverlayMark) - Method in class dataPlotsFX.overlaymark.menuOptions.StandardOverlayMenuItem
 
canBeUsed(DetectionGroupSummary, int, OverlayMark) - Method in class dataPlotsFX.overlaymark.menuOptions.WavExportOverlayMenu
 
cancel - Variable in class PamguardMVC.dataOffline.OfflineDataLoadInfo
Changed by threads to cancel an order.
cancel - Variable in class PamguardMVC.RequestCancellationObject
 
cancel(boolean) - Method in class PamUtils.DetectionMatchWorker
 
CANCEL - Enum constant in enum class targetMotionModule.TargetMotionLocaliser.Interractive
 
CANCEL - Enum constant in enum class targetMotionOld.TargetMotionLocaliser.Interractive
 
CANCEL - Static variable in interface pamViewFX.fxNodes.pamDialogFX.PamInternalDialogFX.InternalDialogAction
 
CANCEL_BACK_BUTTON - Static variable in class pamViewFX.fxNodes.flipPane.PamFlipPane
The back button is cancelled
CANCEL_OPTION - Static variable in class PamView.dialog.warn.WarnOnce
 
CANCEL_OPTION - Static variable in class PamView.JFontChooser
Return value from showDialog().
cancelAutoSave() - Method in class difar.DifarDataUnit
//this is a bit pointless now as action performed doesn't attempt save if timer is stopped
cancelAutoSaveTimer() - Method in class difar.DifarProcess
 
cancelButtonPressed() - Method in class Acquisition.AcquisitionDialog
 
cancelButtonPressed() - Method in class Acquisition.CheckWavFileHeaders
 
cancelButtonPressed() - Method in class Acquisition.filedate.FileDateDialog
 
cancelButtonPressed() - Method in class AirgunDisplay.AirgunParametersDialog
 
cancelButtonPressed() - Method in class AIS.AISDisplayDialog
 
cancelButtonPressed() - Method in class AIS.AISSettingsDialog
 
cancelButtonPressed() - Method in class alarm.actions.email.SendEmailSettingsDialog
 
cancelButtonPressed() - Method in class alarm.actions.serial.AlarmSerialDialog
 
cancelButtonPressed() - Method in class alarm.actions.sound.PlaySoundDialog
 
cancelButtonPressed() - Method in class alarm.actions.udp.AlarmUDPDialog
 
cancelButtonPressed() - Method in class alarm.AlarmDialog
 
cancelButtonPressed() - Method in class amplifier.AmpDialog
 
cancelButtonPressed() - Method in class analogarraysensor.swing.AnalogSensorDialog
 
cancelButtonPressed() - Method in class angleMeasurement.AngleCalibrationDialog
 
cancelButtonPressed() - Method in class angleMeasurement.FluxgateWorldDialog
 
cancelButtonPressed() - Method in class angleVetoes.AngleVetoDialog
 
cancelButtonPressed() - Method in class angleVetoes.AngleVetoesDialog
 
cancelButtonPressed() - Method in class annotation.AnnotationDialog
 
cancelButtonPressed() - Method in class annotation.AnnotationSettingsDialog
 
cancelButtonPressed() - Method in class annotationMark.MarkAnnotationDialog
 
cancelButtonPressed() - Method in class annotationMark.spectrogram.SpectrogramMarkDialog
 
cancelButtonPressed() - Method in class Array.ArrayDialog
 
cancelButtonPressed() - Method in class Array.HydrophoneElementDialog
 
cancelButtonPressed() - Method in class Array.importHydrophoneData.StreamerOriginDialog
 
cancelButtonPressed() - Method in class Array.sensors.swing.ArrayDisplayParamsDialog
 
cancelButtonPressed() - Method in class Array.StreamerDialog
 
cancelButtonPressed() - Method in class ArrayAccelerometer.ArrayAccelDialog
 
cancelButtonPressed() - Method in class Azigram.AzigramDisplayDialog
 
cancelButtonPressed() - Method in class backupmanager.bespoke.BespokeNameDialog
 
cancelButtonPressed() - Method in class backupmanager.swing.ActionDialog
 
cancelButtonPressed() - Method in class backupmanager.swing.FileBackupDialog
 
cancelButtonPressed() - Method in class backupmanager.swing.GenericBackupDialog
 
cancelButtonPressed() - Method in class binaryFileStorage.BinaryMapMakingDialog
 
cancelButtonPressed() - Method in class binaryFileStorage.BinaryStorageDialog
 
cancelButtonPressed() - Method in class cepstrum.CepstrumDialog
 
cancelButtonPressed() - Method in class classifier.WekaOptionsDialog
 
cancelButtonPressed() - Method in class clickDetector.alarm.ClickAlarmDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickClassifiers.basic.ClickTypeDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickClassifiers.ClickClassifyDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickClassifiers.ClickTypesDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickSpectrumDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickSpectrumTemplateDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickSpectrumTemplateEditDialog
 
cancelButtonPressed() - Method in class clickDetector.ConcatenatedSpectrogramdialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.ClickAlarmDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.ClickDelayDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.ClickDisplayDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.ClickMapDialog
Deprecated.
 
cancelButtonPressed() - Method in class clickDetector.dialogs.ClickParamsDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.ClickStorageOptionsDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.ClickTrainIdDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.OverlayOptionsDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.WaveDisplayDialog
 
cancelButtonPressed() - Method in class clickDetector.echoDetection.EchoDialog
 
cancelButtonPressed() - Method in class clickDetector.IDI_DisplayDialog
 
cancelButtonPressed() - Method in class clickDetector.localisation.ClickLocalisationDialog
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.DatabaseCheckDialog
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.EditOfflineEventDialog
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.EventListDialog
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.LabelClicksDialog
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.OfflienEventViewer
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.OfflineEventDialog
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.OfflineEventViewer
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.rcImport.BatchRainbowFileConversion
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.rcImport.RainbowDatabaseConversion
 
cancelButtonPressed() - Method in class clickDetector.waveCorrector.WaveCorrector
 
cancelButtonPressed() - Method in class clickDetector.WignerPlotdialog
 
cancelButtonPressed() - Method in class clipgenerator.ClipDialog
 
cancelButtonPressed() - Method in class clipgenerator.ClipDisplayDialog
 
cancelButtonPressed() - Method in class clipgenerator.ClipGenSettingDialog
 
cancelButtonPressed() - Method in class cpod.CPODDialog
Deprecated.
 
cancelButtonPressed() - Method in class dataGram.DatagramDialog
 
cancelButtonPressed() - Method in class dataGram.DatagramProgressDialog
 
cancelButtonPressed() - Method in class dataMap.filemaps.FileMapMakingdialog
 
cancelButtonPressed() - Method in class dbht.alarm.DbHtAlarmParamsDialog
 
cancelButtonPressed() - Method in class dbht.DbHtDialog
 
cancelButtonPressed() - Method in class dbht.DbHtDisplayDialog
 
cancelButtonPressed() - Method in class dbht.offline.DbHtSummaryDialog
 
cancelButtonPressed() - Method in class decimator.DecimatorParamsDialog
 
cancelButtonPressed() - Method in class depthReadout.DepthDialog
 
cancelButtonPressed() - Method in class depthReadout.MccDialog
 
cancelButtonPressed() - Method in class detectiongrouplocaliser.dialogs.DetectionGroupDialog
 
cancelButtonPressed() - Method in class difar.beamforming.BeamformParamsDialog
 
cancelButtonPressed() - Method in class difar.calibration.CalibrationDialog
 
cancelButtonPressed() - Method in class difar.dialogs.DifarDisplayParamsDialog
 
cancelButtonPressed() - Method in class difar.dialogs.DifarParamsDialog
 
cancelButtonPressed() - Method in class difar.dialogs.SonobuoyDialog
 
cancelButtonPressed() - Method in class effortmonitor.swing.EffortDialog
 
cancelButtonPressed() - Method in class envelopeTracer.EnvelopeDialog
 
cancelButtonPressed() - Method in class fftFilter.FFTFilterDialog
 
cancelButtonPressed() - Method in class fftManager.FFTParametersDialog
 
cancelButtonPressed() - Method in class fftManager.FFTPluginParamsDialog
 
cancelButtonPressed() - Method in class fileOfflineData.OfflineFileProgressDialog
 
cancelButtonPressed() - Method in class fileOfflineData.OfflineFilesDialog
 
cancelButtonPressed() - Method in class Filters.FilterDataSourceDialog
 
cancelButtonPressed() - Method in class Filters.FilterDialog
 
cancelButtonPressed() - Method in class Filters.FilterDialogPanel
 
cancelButtonPressed() - Method in class generalDatabase.DatabaseSpeedDialog
 
cancelButtonPressed() - Method in class generalDatabase.dataExport.DataExportDialog
 
cancelButtonPressed() - Method in class generalDatabase.dataExport.ValueFilterDialog
 
cancelButtonPressed() - Method in class generalDatabase.DBDialog
 
cancelButtonPressed() - Method in class generalDatabase.DBMapMakingDialog
 
cancelButtonPressed() - Method in class generalDatabase.external.CopyDialog
 
cancelButtonPressed() - Method in class generalDatabase.lookupTables.LookupEditDialog
 
cancelButtonPressed() - Method in class gpl.dialog.GPLDialog
 
cancelButtonPressed() - Method in class GPS.GPSParametersDialog
 
cancelButtonPressed() - Method in class GPS.ImportGGADialog
 
cancelButtonPressed() - Method in class GPS.ImportGPSDialog
 
cancelButtonPressed() - Method in class IMU.IMUCalibrationDialog
 
cancelButtonPressed() - Method in class IMU.IMUImportDialog
 
cancelButtonPressed() - Method in class IMU.IMUSettingsDialog
 
cancelButtonPressed() - Method in class IshmaelDetector.IshDetParamsDialog
 
cancelButtonPressed() - Method in class IshmaelDetector.IshDisplayDialog
 
cancelButtonPressed() - Method in class IshmaelLocator.IshLocParamsDialog
 
cancelButtonPressed() - Method in class KernelSmoothing.KernelSmoothingDialog
 
cancelButtonPressed() - Method in class landMarks.LandmarkDialog
 
cancelButtonPressed() - Method in class landMarks.LandmarksDialog
 
cancelButtonPressed() - Method in class levelMeter.LevelMeterDialog
 
cancelButtonPressed() - Method in class likelihoodDetectionModule.LikelihoodDetectionParametersDialog
 
cancelButtonPressed() - Method in class listening.ListeningDialog
 
cancelButtonPressed() - Method in class loc3d_Thode.TowedArray3DParametersDialog
 
cancelButtonPressed() - Method in class Localiser.algorithms.genericLocaliser.MCMC.old.MCMCParamsDialog
 
cancelButtonPressed() - Method in class Localiser.algorithms.timeDelayLocalisers.bearingLoc.DelayOptionsDialog
 
cancelButtonPressed() - Method in class loggerForms.formdesign.FormEditDialog
 
cancelButtonPressed() - Method in class loggerForms.formdesign.PreviewDialog
 
cancelButtonPressed() - Method in class loggerForms.FormsDataUnitEditDialog
 
cancelButtonPressed() - Method in class loggerForms.FormsPlotOptionsDialog
 
cancelButtonPressed() - Method in class ltsa.LtsaDialog
 
cancelButtonPressed() - Method in class Map.gridbaselayer.GridbaseDialog
 
cancelButtonPressed() - Method in class Map.MapCommentDialog
 
cancelButtonPressed() - Method in class Map.MapDetectionsDialog
 
cancelButtonPressed() - Method in class Map.MapParametersDialog
 
cancelButtonPressed() - Method in class mapgrouplocaliser.MapGrouperDialog
 
cancelButtonPressed() - Method in class metadata.swing.MetaDataDialog
 
cancelButtonPressed() - Method in class networkTransfer.emulator.EmulateDialog
 
cancelButtonPressed() - Method in class networkTransfer.receive.swing.NetworkReceiveDialog
 
cancelButtonPressed() - Method in class networkTransfer.send.NetworkSendDialog
 
cancelButtonPressed() - Method in class NMEA.NMEAParametersDialog
 
cancelButtonPressed() - Method in class NMEA.NMEASimDialog
 
cancelButtonPressed() - Method in class NMEA.NMEAStringsTable
 
cancelButtonPressed() - Method in class nmeaEmulator.NMEAOutdialog
 
cancelButtonPressed() - Method in class nmeaEmulator.TimesDialog
 
cancelButtonPressed() - Method in class noiseBandMonitor.NoiseBandDialog
 
cancelButtonPressed() - Method in class noiseMonitor.alarm.NoiseAlarmDialog
 
cancelButtonPressed() - Method in class noiseMonitor.NoiseDialog
 
cancelButtonPressed() - Method in class noiseMonitor.NoiseDisplayDialog
 
cancelButtonPressed() - Method in class noiseMonitor.UserBandDialog
 
cancelButtonPressed() - Method in class noiseOneBand.alarm.OneBandAlarmParamsDialog
 
cancelButtonPressed() - Method in class noiseOneBand.offline.OneBandSummaryDialog
 
cancelButtonPressed() - Method in class noiseOneBand.OneBandDialog
 
cancelButtonPressed() - Method in class noiseOneBand.OneBandDisplayDialog
 
cancelButtonPressed() - Method in class offlineProcessing.OLProcessDialog
 
cancelButtonPressed() - Method in class PamController.DisplayScalingDialog
 
cancelButtonPressed() - Method in class PamController.fileprocessing.ReprocessChoiceDialog
 
cancelButtonPressed() - Method in class PamController.ModuleOrderDialog
 
cancelButtonPressed() - Method in class PamController.NewModuleDialog
 
cancelButtonPressed() - Method in class PamController.settings.output.xml.NodeSelectDialog
 
cancelButtonPressed() - Method in class PamController.settings.output.xml.PAMGuardXMLPreview
 
cancelButtonPressed() - Method in class PamController.settings.output.xml.XMLWriterDialog
 
cancelButtonPressed() - Method in class PamController.settings.SettingsImportDialog
 
cancelButtonPressed() - Method in class PamController.SettingsFileDialog
 
cancelButtonPressed() - Method in class PamController.StorageOptionsDialog
 
cancelButtonPressed() - Method in class PamguardMVC.datakeeper.DataKeepDialog
 
cancelButtonPressed() - Method in class PamguardMVC.dataSelector.DataSelectDialog
 
cancelButtonPressed() - Method in class PamguardMVC.uid.repair.UIDRepairDialog
 
cancelButtonPressed() - Method in class pamMaths.MatrixDialog
 
cancelButtonPressed() - Method in class PamModel.AboutPluginDisplay
 
cancelButtonPressed() - Method in class PamModel.DeprecatedModuleDialog
 
cancelButtonPressed() - Method in class PamModel.parametermanager.swing.ManagedParameterDialog
 
cancelButtonPressed() - Method in class PamModel.ThreadingDialog
 
cancelButtonPressed() - Method in class pamScrollSystem.coupling.CouplerDialog
 
cancelButtonPressed() - Method in class pamScrollSystem.jumping.ScrollJumpDialog
 
cancelButtonPressed() - Method in class pamScrollSystem.LoadingDataDialog
 
cancelButtonPressed() - Method in class pamScrollSystem.LoadOptionsDialog
 
cancelButtonPressed() - Method in class PamUtils.LatLongDialog
 
cancelButtonPressed() - Method in class PamUtils.time.GlobalTimeDialog
 
cancelButtonPressed() - Method in class PamUtils.time.nmea.NMEATimeDialog
 
cancelButtonPressed() - Method in class PamUtils.time.ntp.NTPDialog
 
cancelButtonPressed() - Method in class PamUtils.time.TimeZoneDisplayDialog
 
cancelButtonPressed() - Method in class PamUtils.worker.PamWorkDialog
 
cancelButtonPressed() - Method in class PamView.AnnotationsPopup
 
cancelButtonPressed() - Method in class PamView.dialog.GenericSwingDialog
 
cancelButtonPressed() - Method in class PamView.dialog.PamDialog
called when the cancel button is pressed before the dialog closes.
cancelButtonPressed() - Method in class PamView.dialog.warn.WarnOnceDialog
 
cancelButtonPressed() - Method in class PamView.dialog.warn.WarnOnceDialogFX
If the cancel button is pressed, check if this is a warning message.
cancelButtonPressed() - Method in class PamView.hidingpanel.HidingDialog
 
cancelButtonPressed() - Method in class PamView.importData.ImportDataDialog
 
cancelButtonPressed() - Method in class PamView.ImportLoadBar
 
cancelButtonPressed() - Method in class PamView.PamObjectList
 
cancelButtonPressed() - Method in class PamView.PamSymbolDialog
 
cancelButtonPressed() - Method in class PamView.paneloverlay.overlaymark.GeneralMarkDialog
 
cancelButtonPressed() - Method in class PamView.paneloverlay.overlaymark.SwingRelationshipsDialog
 
cancelButtonPressed() - Method in class PamView.ViewTimesDialog
 
cancelButtonPressed() - Method in class pamViewFX.fxNodes.pamDialogFX.PamDialogFX2AWT
 
cancelButtonPressed() - Method in class patchPanel.PatchPanelDialog
 
cancelButtonPressed() - Method in class performanceTests.PerformanceDialog
 
cancelButtonPressed() - Method in class printscreen.swing.PrintScreenDialog
 
cancelButtonPressed() - Method in class qa.swing.OpsEditDialog
 
cancelButtonPressed() - Method in class qa.swing.QAReportDialog
 
cancelButtonPressed() - Method in class quickAnnotation.importAnnotation.QuickAnnotationDialog
 
cancelButtonPressed() - Method in class quickAnnotation.QuickAnnotationParamsDialog
 
cancelButtonPressed() - Method in class radardisplay.RadarParametersDialog
 
cancelButtonPressed() - Method in class ravendata.swing.RavenImportDialog
 
cancelButtonPressed() - Method in class RightWhaleEdgeDetector.RWEDialog
 
cancelButtonPressed() - Method in class rocca.RoccaParametersDialog
 
cancelButtonPressed() - Method in class rockBlock.RockBlockParamsDialog
 
cancelButtonPressed() - Method in class seismicVeto.VetoParametersDialog
 
cancelButtonPressed() - Method in class simulatedAcquisition.movement.CircularMovementDialog
 
cancelButtonPressed() - Method in class simulatedAcquisition.movement.GridMovementDialog
 
cancelButtonPressed() - Method in class simulatedAcquisition.SimObjectDialog
 
cancelButtonPressed() - Method in class soundPlayback.swing.PlaybackDialog
 
cancelButtonPressed() - Method in class SoundRecorder.RecorderSettingsDialog
 
cancelButtonPressed() - Method in class SoundRecorder.trigger.TriggerOptionsDialog
 
cancelButtonPressed() - Method in class soundtrap.ImportBCLDialog
 
cancelButtonPressed() - Method in class soundtrap.sud.SUDParamsDialog
 
cancelButtonPressed() - Method in class Spectrogram.SpectrogramParamsDialog
 
cancelButtonPressed() - Method in class spectrogramNoiseReduction.SpectrogramNoiseDialog
 
cancelButtonPressed() - Method in class targetMotionModule.offline.TMOfflineFunctions.TMOLProcessDialog
 
cancelButtonPressed() - Method in class targetMotionOld.dialog.TargetMotionDialog
 
cancelButtonPressed() - Method in class tethys.calibration.swing.CalibrationsExportWizard
 
cancelButtonPressed() - Method in class tethys.deployment.swing.DeploymentWizard
 
cancelButtonPressed() - Method in class tethys.deployment.swing.EffortProblemDialog
 
cancelButtonPressed() - Method in class tethys.deployment.swing.RecordingGapDialog
 
cancelButtonPressed() - Method in class tethys.species.swing.DataBlockSpeciesDialog
 
cancelButtonPressed() - Method in class tethys.species.swing.SpeciesMapIODialog
 
cancelButtonPressed() - Method in class tethys.species.swing.SpeciesSearchDialog
 
cancelButtonPressed() - Method in class tethys.swing.documents.TethysDocumentsFrame
 
cancelButtonPressed() - Method in class tethys.swing.export.DetectionsExportWizard
 
cancelButtonPressed() - Method in class tethys.swing.NewProjectDialog
 
cancelButtonPressed() - Method in class tethys.swing.ProjectDeploymentsDialog
 
cancelButtonPressed() - Method in class tethys.swing.SelectProjectDialog
 
cancelButtonPressed() - Method in class tethys.swing.SelectServerdDialog
 
cancelButtonPressed() - Method in class tethys.swing.XMLStringView
 
cancelButtonPressed() - Method in class tipOfTheDay.PamTipViewer
 
cancelButtonPressed() - Method in class videoRangePanel.layoutAWT.AcceptMeasurementDialog
 
cancelButtonPressed() - Method in class videoRangePanel.layoutAWT.HeightDialog
 
cancelButtonPressed() - Method in class videoRangePanel.layoutAWT.LandMarkAddDialog
 
cancelButtonPressed() - Method in class videoRangePanel.layoutAWT.LandMarkGroupDialog
 
cancelButtonPressed() - Method in class videoRangePanel.layoutAWT.ManualLocationDialog
 
cancelButtonPressed() - Method in class videoRangePanel.layoutAWT.VRCalibrationDialog
 
cancelButtonPressed() - Method in class videoRangePanel.layoutAWT.VRParametersDialog
 
cancelButtonPressed() - Method in class whistleClassifier.ClassifierTrainingDialog
 
cancelButtonPressed() - Method in class whistleClassifier.training.BatchTrainingDialog
 
cancelButtonPressed() - Method in class whistleClassifier.training.ClassifierTrainingDialog
 
cancelButtonPressed() - Method in class whistleClassifier.WhistleClassificationDialog
 
cancelButtonPressed() - Method in class whistleDetector.WhistleParametersDialog
 
cancelButtonPressed() - Method in class whistlesAndMoans.alarm.WMAlarmDialog
 
cancelButtonPressed() - Method in class whistlesAndMoans.WhistleToneDialog
 
cancelButtonPressed() - Method in class whistlesAndMoans.WMDisplayDialog
 
cancelButtonPressed() - Method in class whistlesAndMoans.WMRecordTriggerdialog
 
cancelCellEditing() - Method in class likelihoodDetectionModule.AbstractCellEditor
 
cancelDataOrder() - Method in class PamguardMVC.dataOffline.OfflineDataLoading
Cancels the current order.
cancelDataOrder() - Method in class PamguardMVC.PamDataBlock
Cancel the current offline data order
cancelDataOrder(boolean) - Method in class PamguardMVC.dataOffline.OfflineDataLoading
 
cancelDataOrder(boolean) - Method in class PamguardMVC.PamDataBlock
Cancel the current offline data order
cancelEdit() - Method in class pamViewFX.fxNodes.table.AcceptOnExitTableCell
cancelExport() - Method in class tethys.detection.DetectionsHandler
send a cancel command to export thread if it's running
cancelLoad() - Method in class offlineProcessing.OfflineTaskGroup.TaskGroupWorker
 
cancelLoad() - Method in interface pamScrollSystem.ViewLoadObserver
Ask the load observer if loading should be stopped.
CancelObserver - Interface in PamView
Observer to use with Pamdialog which is called whenever the cancel button is pressed.
cancelPlaybackData() - Method in interface soundPlayback.PlaybackDataServer
Cancel data loading.
cancelPressed() - Method in class difar.calibration.CalibrationDialog
 
cancelPressed() - Method in class generalDatabase.external.CopyDialog
 
cancelPressed() - Method in interface PamView.CancelObserver
Called whenever a PamDialog cancel button is pressed.
cancelTest() - Method in class qa.generator.testset.QATestSet
 
cancelTest(QATestDataUnit) - Method in class qa.generator.QAGeneratorProcess
Called to cancel a test.
canClearZoomShape(MouseEvent) - Method in class dataPlots.mouse.TDGraphZoomer
 
canClearZoomShape(MouseEvent) - Method in interface PamView.zoomer.Zoomable
 
canClearZoomShape(MouseEvent) - Method in class Spectrogram.SpectrogramZoomer
 
canClose() - Method in class clickDetector.ClickControl
 
canClose() - Method in class generalDatabase.DBControl
 
canClose() - Method in class loggerForms.FormsControl
 
canClose() - Method in class networkTransfer.receive.NetworkReceiver
 
canClose() - Method in class PamController.PamConfiguration
Can PAMGUARD shut down.
canClose() - Method in class PamController.PamControlledUnit
Called before Pamguard shuts down.
canClose() - Method in class PamController.PamController
Can PAMGUARD shut down.
canConfigure() - Method in interface depthReadout.DepthSystem
Say whether ot not a particular sensor can be configured.
canConfigure() - Method in class depthReadout.MccDepthSystem
 
canCreate() - Method in class analoginput.swing.AnalogDiagnosticsDisplayProvider
 
canCreate() - Method in class Array.sensors.swing.ArraySensorPanelProvider
 
canCreate() - Method in class backupmanager.swing.BackupDisplayProvider
 
canCreate() - Method in class beamformer.localiser.plot.BeamLocDisplayProvider
 
canCreate() - Method in class bearinglocaliser.display.BearingDisplayProvider
 
canCreate() - Method in class dataPlots.TDDisplayProvider
 
canCreate() - Method in class dataPlotsFX.TDDisplayProviderFX
 
canCreate() - Method in class detectiongrouplocaliser.dialogs.DetectionGroupTableProvider
 
canCreate() - Method in class difar.display.DifarDisplayProvider
 
canCreate() - Method in class difar.display.DifarDisplayProvider2
 
canCreate() - Method in class difar.display.SonobuoyManagerProvider
 
canCreate() - Method in class effortmonitor.swing.EffortDisplayProvider
 
canCreate() - Method in class generalDatabase.DBSystem
 
canCreate() - Method in class generalDatabase.MSAccessSystem
 
canCreate() - Method in class generalDatabase.ServerBasedSystem
 
canCreate() - Method in class generalDatabase.sqlite.SqliteSystem
 
canCreate() - Method in class generalDatabase.sqlServerExpress.SQLServerSystem
 
canCreate() - Method in class generalDatabase.ucanAccess.UCanAccessSystem
 
canCreate() - Method in class localiserDisplay.LocaliserDisplayProvider
 
canCreate() - Method in class Map.MapDisplayProvider
 
canCreate() - Method in class map3D.Map3DDisplayProvider
 
canCreate() - Method in class PamModel.PamModuleInfo
 
canCreate() - Method in class qa.swing.QADisplayProvider
 
canCreate() - Method in class radardisplay.RadarDisplayProvider
 
canCreate() - Method in class Spectrogram.SpectrogramDiplayProvider
 
canCreate() - Method in interface userDisplay.UserDisplayProvider
 
candAnimalMarker - Static variable in class videoRangePanel.vrmethods.landMarkMethod.LandMarkGUIAWT
 
candAnimalMarker - Static variable in class videoRangePanel.vrmethods.landMarkMethod.LandMarkGUIFX
 
canDemux() - Method in class difar.DifarControl
Can the system handle demuxing the next data unit ? Currently used to enable menus on the clip display
canDestroyMark(MouseEvent) - Method in class PamView.paneloverlay.overlaymark.OverlayMarker
Check whether a current mark can be destroyed.
canDetectCluster(QACluster, PamDataBlock) - Method in class qa.analyser.QAAnalyser
 
candidateMarker - Static variable in class videoRangePanel.layoutAWT.VRPanel
 
candidateSymbol - Static variable in class videoRangePanel.layoutAWT.VRPanel
 
canDo() - Method in class alarm.actions.AlarmAction
Alarm action can complete (i.e.
canDo() - Method in class alarm.actions.email.SendEmailAction
 
canDo() - Method in class alarm.actions.serial.AlarmSerialAction
 
canDo() - Method in class alarm.actions.sound.PlaySound
 
canDo() - Method in class alarm.actions.udp.AlarmUDPAction
 
canDraw(GeneralProjector) - Method in class clipgenerator.ClipOverlayGraphics
 
canDraw(GeneralProjector) - Method in class PamguardMVC.PamObservable
 
canDraw(GeneralProjector) - Method in class PamView.PamDetectionOverlayGraphics
Used to tell the various displays whether or not the data in the parentDataBlock can be drawn on each of those displays.
canDraw(GeneralProjector) - Method in class PamView.PanelOverlayDraw
 
canDraw(GeneralProjector) - Method in class targetMotionModule.TargetMotionDataBlock
 
canDraw(GeneralProjector) - Method in class whistleDetector.WhistleEventGraphics
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class AirgunDisplay.AirgunGraphics
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class annotationMark.MarkOverlayDraw
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class Array.StreamerOverlayGraphics
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class autecPhones.AutecGraphics
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class GPS.GPSOverlayGraphics
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class ishmaelComms.IshmaelGraphics
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class landMarks.LandmarkGraphics
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class listening.ListeningEffortGraphics
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class listening.ThingHeardGraphics
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class loggerForms.LoggerFormGraphics
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class Map.gridbaselayer.GridOverlayDraw
Deprecated.
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class Map.MapCommentOverlayGraphics
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class meygenturbine.MeygenGraphics
 
canDraw(GeneralProjector.ParameterType[], GeneralProjector.ParameterUnits[]) - Method in class networkTransfer