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C

c - Variable in class PamView.hidingpanel.TabbedHidingPane.ShowingPanel
 
CAL_TAB - Static variable in class videoRangePanel.panels.VRParametersDialog
 
calc(boolean, int, int, double[], double, double, double, int, double, double[], int, double, int) - Method in class IshmaelLocator.LM
See the long comment for the LM class for details.
calc_simple(boolean, int, int, double, double[]) - Method in class IshmaelLocator.LM
Run the Levenberg-Marquardt method using reasonable guesses for many of the input parameters.
CALC_TAB - Static variable in class videoRangePanel.panels.VRParametersDialog
 
calcAngle(Point3d, Point3f) - Static method in class Localiser.timeDelayLocalisers.MCMCmodels.Vert3D
Work out theta and phi between the origin point and another point,
calcAnimalBearing(double, Point, Point, double) - Static method in class videoRangePanel.vrmethods.VRLandMarkMethod
Calculates the bearing of the target animal based on a landmark point, the animal location and a calibration value;
calcAnimalPitch(double, Point, Point, double) - Static method in class videoRangePanel.vrmethods.VRLandMarkMethod
Calculates the pitch of the target animal based on a landmark point, the animal location and a calibration value;
calcBearingDiffAnimal(double, Point, Point) - Static method in class videoRangePanel.vrmethods.VRLandMarkMethod
Calculates the bearing of the animal in pixels
calcdefaultZoomFactor() - Method in class clickDetector.ConcatenatedSpectrogram
 
calcDetectionMatchTDs(PamDetection, ArrayList<PamDataBlock>, Integer) - Method in class staticLocaliser.algorithms.AbstractSLAlgorithm
Calculate the detection match for a PamDetection.
calcDimensionArray() - Method in class Localiser.timeDelayLocalisers.LikelihoodSurface
 
calcFreq(int) - Static method in class noiseBandMonitor.BandData
 
calcFrequencyRangeDisplay() - Method in class Spectrogram.SpectrogramDisplay
Checks the frequency range range to be displayed.
calcGPSPos3D(LatLong) - Method in class targetMotionModule.panels.MapPanel3D
Converts a LatLong to a position a Point3f rotated using the event rotator.
calcGPSPos3D(LatLong) - Method in class targetMotionOld.dialog.DialogMap3D
Converts a LatLong to a position a Point3f rotated using the event rotator.
calcHydrophoneNumber(int) - Static method in class PamDetection.AbstractDetectionMatch
For N synchronised hydrophones there are N*(N-1)/2 time delays.
calcHydrophoneNumber(int) - Static method in class PamUtils.PamUtils
For N synchronised hydrophones there are N*(N-1)/2 time delays.
calcLocLatLong(VRMeasurement) - Method in class videoRangePanel.vrmethods.AbstractVRMethod
Calculates the lat long of an animal based on heading, range and the image origin.
calcMovingObjectPosition(GpsData, double) - Static method in class Map.TransformUtilities
 
calcNonNullDelays(ArrayList<TDArrayList<Double>>) - Static method in class staticLocaliser.algorithms.AbstractSLAlgorithm
Calculates the number of non null delays within
calcPerpPoint(double, Point, Point, LandMark, LandMark, LatLong) - Method in class videoRangePanel.vrmethods.VRLandMarkMethod
Calculates location of the perpendicular vertex of the triangle defined by landmarks 1 and 2, with the side of the triangle following the tilt of the picture.
calcPerpPoint(double, double, Point) - Static method in class videoRangePanel.vrmethods.VRLandMarkMethod
Calculates the point at which the perpendicular corner of the pitch/bearing triangle resides.
calcPitch(LandMark, LatLong) - Static method in class videoRangePanel.vrmethods.VRLandMarkMethod
Calculate the pitch between a landMark and image location.
calcPitchDiffAnimal(double, Point, Point) - Static method in class videoRangePanel.vrmethods.VRLandMarkMethod
Calculates the pitch of the animal in pixels
calcPoint(Point3d, double, double, double) - Static method in class Localiser.timeDelayLocalisers.MCMCmodels.Vert3D
Work out the location of a point based on theta, phi and the range between the point and the origin
calcSource(ArrayList<Double>, ArrayList<Point3f>, double) - Method in class Localiser.timeDelayLocalisers.Hyperbolic
 
calcSpecData(PamDetection, int) - Method in class clickDetector.ConcatenatedSpectrogram
Calculate an 2D float ArrayList of all the click FFT data;
calcStreamerPath(TMManager.TMInfoWorker) - Method in class targetMotionModule.TargetMotionControl
Calculate the path of all streamers over the loaded GPS data.
calcStreamerPath(TargetMotionInformation, long, long, TMManager.TMInfoWorker) - Static method in class targetMotionModule.TargetMotionControl
Calculate the path of all streamers over the loaded GPS data.
calcTDHyperboloid(double, double, double, float, float, int) - Static method in class Localiser.TDHyperboleUtils
Calculates a series of points for the hyperboloid defined by a time delay and between two hydrophones separated by hDistance;
calcTDHyperboloid(double, double, double, float, float, int) - Static method in class Localiser.timeDelayLocalisers.TDHyperboleUtils
Calculates a series of points for the hyperboloid defined by a time delay and between two hydrophones separated by hDistance;
calcTDNumber(int) - Static method in class PamDetection.AbstractDetectionMatch
For N synchronised hydrophones there are N*(N-1)/2 time delays.
calcTDNumber(int) - Static method in class PamUtils.PamUtils
For N synchronised hydrophones there are N*(N-1)/2 time delays.
calcTilt(Point, Point, LandMark, LandMark, LatLong) - Static method in class videoRangePanel.vrmethods.VRLandMarkMethod
 
calcTilt(Point, Point, double, double) - Static method in class videoRangePanel.vrmethods.VRLandMarkMethod
Calculates the tilt of the image based on two landmarks selected on that image and the known angles between those landmarks.
calcTimeDelays(ArrayList<ClickDetectionMatch.ClickMatchUnit>) - Method in class clickDetector.ClickDetectionMatch
Calculate the time delays between a list of clicks using the indexM1 and indexM2 to specify the channel ordering for calculation.
calcTimeDelays(PamDetection, ArrayList<PamDataBlock>, Integer) - Method in class staticLocaliser.TDManager
Calculate the detection match for a PamDetection and sets all the relevant fields in the class.
calcTMDetectionInfo(ArrayList<PamDetection>, TargetMotionLocaliserProvider) - Method in class targetMotionModule.TargetMotionControl
Calculates the targetMotiojnInfo for a set of detections.
calculate(double[]) - Method in class likelihoodDetectionModule.spectralEti.SpectralBand
Calculates the energy in the given band.
calculateAmplitude(int) - Method in class clickDetector.ClickDetection
Calculate the peak waveform amplitude making the correction of rotating teh wave so it's two ends are at zero.
calculateArch() - Static method in class PamUtils.PlatformInfo
 
calculateBearing() - Method in class whistleDetector.WhistleLocalisation
 
calculateClickStats() - Method in class rocca.RoccaContourDataBlock
Calculate the statistics specific to a click detection
calculateDifarGain() - Method in class difar.DifarDataUnit
Now also work out the DIFAR gain for that angle.
calculateDifarGain(Double, Double) - Method in class difar.DifarDataUnit
Calculate teh DIFAR gain for a given angle and frequency
calculateFilter() - Method in class Filters.FIRArbitraryFilter
 
calculateFilterThings(double) - Method in class dbht.DbHtParameters
 
calculateOmegaValues() - Method in class Filters.IIRFilterMethod
 
calculateOS() - Static method in class PamUtils.PlatformInfo
 
calculatePerformance() - Method in class noiseBandMonitor.BandAnalyser
 
calculateRMSAmplitude() - Method in class whistlesAndMoans.ConnectedRegion
 
calculateSEL(OneBandDataUnit, int) - Method in class noiseOneBand.OneBandProcess
Calculate SEL and add it to a data unit.
calculateStatistics() - Method in class rocca.RoccaContourDataBlock
Once the Datablock is filled, this routine will calculate the statistics of the contour.
calculateTimeParams() - Method in class rocca.RoccaSightingDataUnit
Calculate sighting parameters based on time data.
CalFileReader - Class in d3.calibration
 
calibrate(AcquisitionSettings, LikelihoodFFTParameters) - Method in class likelihoodDetectionModule.GuardBand
Calibrate the guard band with the audio source parameters (acquisition) and the FFT parameters.
calibrate(AcquisitionSettings, LikelihoodFFTParameters) - Method in class likelihoodDetectionModule.SignalBand
Calibrates the SignalBand according to the supplied audio data source (acquisition) and FFT parameters.
calibrate(AcquisitionSettings, int) - Method in class likelihoodDetectionModule.TargetConfiguration
Calibrate the TargetConfiguration against the supplied audio source parameters (the AcquisitionSettings) and the channel map.
CALIBRATE_1 - Static variable in class videoRangePanel.vrmethods.AddCalibrationMethod
 
CALIBRATE_2 - Static variable in class videoRangePanel.vrmethods.AddCalibrationMethod
 
CALIBRATION_USE_MEAN - Static variable in class difar.DifarParameters
 
CALIBRATION_USE_MODE - Static variable in class difar.DifarParameters
Choices for calibration dialog when user right clicks and / or new data arrive.
calibrationChoice - Variable in class difar.DifarParameters
 
CalibrationClip - Static variable in class difar.DifarParameters
 
calibrationData - Variable in class videoRangePanel.VRMeasurement
 
CalibrationDialog - Class in difar.calibration
 
CalibrationHistogram - Class in difar.calibration
Contains data for a Difar calibration histogram.
CalibrationHistogram(DifarControl, int, double) - Constructor for class difar.calibration.CalibrationHistogram
 
CalibrationInfo - Class in d3.calibration
Information for a specific calibration type.
CalibrationInfo(String) - Constructor for class d3.calibration.CalibrationInfo
 
calibrationMarker - Static variable in class videoRangePanel.panels.VRPanel
 
CalibrationProcess - Class in difar.calibration
Handle the calibration process for a single channel
CalibrationProcess(DifarControl, int) - Constructor for class difar.calibration.CalibrationProcess
 
CalibrationSet - Class in d3.calibration
 
CalibrationSet(String, String, String) - Constructor for class d3.calibration.CalibrationSet
 
calibrationSymbol - Static variable in class videoRangePanel.panels.VRPanel
 
callJniGetAsioDrivers(AsioDriverInfos) - Method in class asiojni.AsioJniInterface
 
callSettings() - Method in class alarm.AlarmOfflineTask
 
callSettings() - Method in class clickDetector.offlineFuncs.ClickDelayTask
 
callSettings() - Method in class clickDetector.offlineFuncs.ClickReClassifyTask
 
callSettings() - Method in class clickDetector.offlineFuncs.EchoDetectionTask
 
callSettings() - Method in class dbht.offline.DbHtSummaryTask
 
callSettings() - Method in class noiseOneBand.offline.OneBandSummaryTask
 
callSettings() - Method in class offlineProcessing.OfflineTask
Call any task specific settings
callSettings() - Method in class staticLocaliser.offline.BatchLocaliseOfflineTask
 
callSettings() - Method in class staticLocaliser.offline.FindDetectionNOfflineTask
 
callSettings() - Method in class whistleClassifier.offline.ReclassifyTask
 
callSign - Variable in class AIS.AISStaticData
 
CAMERA_POS - Static variable in class videoRangePanel.panels.VRParametersDialog
 
canAnnotate(Class) - Method in class annotation.calcs.snr.SNRAnnotationType
 
canAnnotate(Class) - Method in class annotation.DataAnnotationType
Find out whether or not a particular type of data can be annotated
canAnnotate(Class) - Method in class annotation.string.StringAnnotationType
 
canAutoAnnotate() - Method in class annotation.calcs.snr.SNRAnnotationType
 
canAutoAnnotate() - Method in class annotation.DataAnnotationType
 
canAutoAnnotate() - Method in class annotation.string.StringAnnotationType
 
canAutoProcess() - Method in class difar.DifarDataUnit
Autoprocess everything except "Default" clips
canAutoSave() - Method in class difar.DifarDataUnit
//this is a bit pointless now as action performed doesn't attempt save if timer is stopped whether the difar unit has been interacted with causing autosave to be inapropriate
cancel - Variable in class PamguardMVC.RequestCancellationObject
 
cancel(boolean) - Method in class PamUtils.DetectionMatchWorker
 
CANCEL_OPTION - Static variable in class PamView.JFontChooser
Return value from showDialog().
cancelAutoSave() - Method in class difar.DifarDataUnit
//this is a bit pointless now as action performed doesn't attempt save if timer is stopped
cancelAutoSaveTimer() - Method in class difar.DifarProcess
 
cancelButtonPressed() - Method in class Acquisition.AcquisitionDialog
 
cancelButtonPressed() - Method in class Acquisition.CheckWavFileHeaders
 
cancelButtonPressed() - Method in class Acquisition.offlineFuncs.FileMapMakingdialog
 
cancelButtonPressed() - Method in class AirgunDisplay.AirgunParametersDialog
 
cancelButtonPressed() - Method in class AIS.AISDisplayDialog
 
cancelButtonPressed() - Method in class AIS.AISSettingsDialog
 
cancelButtonPressed() - Method in class alarm.actions.serial.AlarmSerialDialog
 
cancelButtonPressed() - Method in class alarm.actions.sound.PlaySoundDialog
 
cancelButtonPressed() - Method in class alarm.AlarmDialog
 
cancelButtonPressed() - Method in class amplifier.AmpDialog
 
cancelButtonPressed() - Method in class angleMeasurement.AngleCalibrationDialog
 
cancelButtonPressed() - Method in class angleMeasurement.FluxgateWorldDialog
 
cancelButtonPressed() - Method in class angleVetoes.AngleVetoDialog
 
cancelButtonPressed() - Method in class angleVetoes.AngleVetoesDialog
 
cancelButtonPressed() - Method in class annotationMark.MarkAnnotationDialog
 
cancelButtonPressed() - Method in class Array.ArrayDialog
 
cancelButtonPressed() - Method in class Array.HydrophoneElementDialog
 
cancelButtonPressed() - Method in class Array.importHydrophoneData.StreamerOriginDialog
 
cancelButtonPressed() - Method in class Array.StreamerDialog
 
cancelButtonPressed() - Method in class ArrayAccelerometer.ArrayAccelDialog
 
cancelButtonPressed() - Method in class beakedWhaleProtocol.BeakedDialog
 
cancelButtonPressed() - Method in class beakedWhaleProtocol.BeakedLocationDialog
 
cancelButtonPressed() - Method in class binaryFileStorage.BinaryMapMakingDialog
 
cancelButtonPressed() - Method in class binaryFileStorage.BinaryStorageDialog
 
cancelButtonPressed() - Method in class classifier.WekaOptionsDialog
 
cancelButtonPressed() - Method in class clickDetector.alarm.ClickAlarmDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickClassifiers.basic.ClickTypeDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickClassifiers.ClickClassifyDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickClassifiers.ClickTypesDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickSpectrumDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickSpectrumTemplateDialog
 
cancelButtonPressed() - Method in class clickDetector.ClickSpectrumTemplateEditDialog
 
cancelButtonPressed() - Method in class clickDetector.ConcatenatedSpectrogramdialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.ClickAlarmDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.ClickDisplayDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.ClickMapDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.ClickParamsDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.ClickStorageOptionsDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.ClickTrainIdDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.OverlayOptionsDialog
 
cancelButtonPressed() - Method in class clickDetector.dialogs.WaveDisplayDialog
 
cancelButtonPressed() - Method in class clickDetector.echoDetection.EchoDialog
 
cancelButtonPressed() - Method in class clickDetector.IDI_DisplayDialog
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.DatabaseCheckDialog
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.EditOfflineEventDialog
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.EventListDialog
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.LabelClicksDialog
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.OfflienEventViewer
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.OfflineEventDialog
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.OfflineEventViewer
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.rcImport.BatchRainbowFileConversion
 
cancelButtonPressed() - Method in class clickDetector.offlineFuncs.rcImport.RainbowDatabaseConversion
 
cancelButtonPressed() - Method in class clickDetector.waveCorrector.WaveCorrector
 
cancelButtonPressed() - Method in class clickDetector.WignerPlotdialog
 
cancelButtonPressed() - Method in class clipgenerator.ClipDialog
 
cancelButtonPressed() - Method in class clipgenerator.ClipDisplayDialog
 
cancelButtonPressed() - Method in class clipgenerator.ClipGenSettingDialog
 
cancelButtonPressed() - Method in class cpod.CPODDialog
 
cancelButtonPressed() - Method in class dataGram.DatagramDialog
 
cancelButtonPressed() - Method in class dataGram.DatagramProgressDialog
 
cancelButtonPressed() - Method in class dbht.alarm.DbHtAlarmParamsDialog
 
cancelButtonPressed() - Method in class dbht.DbHtDialog
 
cancelButtonPressed() - Method in class dbht.DbHtDisplayDialog
 
cancelButtonPressed() - Method in class dbht.offline.DbHtSummaryDialog
 
cancelButtonPressed() - Method in class decimator.DecimatorParamsDialog
 
cancelButtonPressed() - Method in class decimus.summarystring.plots.DstrPlotDialog
 
cancelButtonPressed() - Method in class depthReadout.DepthDialog
 
cancelButtonPressed() - Method in class depthReadout.MccDialog
 
cancelButtonPressed() - Method in class difar.calibration.CalibrationDialog
 
cancelButtonPressed() - Method in class difar.dialogs.DifarDisplayParamsDialog
 
cancelButtonPressed() - Method in class difar.dialogs.DifarParamsDialog
 
cancelButtonPressed() - Method in class echoDetector.EchoParametersDialog
 
cancelButtonPressed() - Method in class EdgeDetector.EdgeParamsDialog
 
cancelButtonPressed() - Method in class envelopeTracer.EnvelopeDialog
 
cancelButtonPressed() - Method in class fftFilter.FFTFilterDialog
 
cancelButtonPressed() - Method in class fftManager.FFTParametersDialog
 
cancelButtonPressed() - Method in class fftManager.FFTPluginParamsDialog
 
cancelButtonPressed() - Method in class fileOfflineData.OfflineFileProgressDialog
 
cancelButtonPressed() - Method in class fileOfflineData.OfflineFilesDialog
 
cancelButtonPressed() - Method in class Filters.FilterDataSourceDialog
 
cancelButtonPressed() - Method in class Filters.FilterDialog
 
cancelButtonPressed() - Method in class Filters.FilterDialogPanel
 
cancelButtonPressed() - Method in class generalDatabase.DatabaseSpeedDialog
 
cancelButtonPressed() - Method in class generalDatabase.dataExport.DataExportDialog
 
cancelButtonPressed() - Method in class generalDatabase.dataExport.ValueFilterDialog
 
cancelButtonPressed() - Method in class generalDatabase.DBDialog
 
cancelButtonPressed() - Method in class generalDatabase.DBMapMakingDialog
 
cancelButtonPressed() - Method in class generalDatabase.lookupTables.LookupEditDialog
 
cancelButtonPressed() - Method in class GPS.GPSParametersDialog
 
cancelButtonPressed() - Method in class GPS.ImportGGADialog
 
cancelButtonPressed() - Method in class GPS.ImportGPSDialog
 
cancelButtonPressed() - Method in class IMU.IMUCalibrationDialog
 
cancelButtonPressed() - Method in class IMU.IMUImportDialog
 
cancelButtonPressed() - Method in class IMU.IMUSettingsDialog
 
cancelButtonPressed() - Method in class ipiDemo.IpiParametersDialog
 
cancelButtonPressed() - Method in class IshmaelDetector.IshDetParamsDialog
 
cancelButtonPressed() - Method in class IshmaelLocator.IshLocParamsDialog
 
cancelButtonPressed() - Method in class KernelSmoothing.KernelSmoothingDialog
 
cancelButtonPressed() - Method in class landMarks.LandmarkDialog
 
cancelButtonPressed() - Method in class landMarks.LandmarksDialog
 
cancelButtonPressed() - Method in class levelMeter.LevelMeterDialog
 
cancelButtonPressed() - Method in class likelihoodDetectionModule.LikelihoodDetectionParametersDialog
 
cancelButtonPressed() - Method in class listening.ListeningDialog
 
cancelButtonPressed() - Method in class loc3d_Thode.TowedArray3DParametersDialog
 
cancelButtonPressed() - Method in class Localiser.bearingLocaliser.DelayOptionsDialog
 
cancelButtonPressed() - Method in class Localiser.timeDelayLocalisers.LikelihoodSurfaceDialog
 
cancelButtonPressed() - Method in class Localiser.timeDelayLocalisers.MCMCParamsDialog
 
cancelButtonPressed() - Method in class loggerForms.formdesign.FormEditDialog
 
cancelButtonPressed() - Method in class loggerForms.formdesign.PreviewDialog
 
cancelButtonPressed() - Method in class loggerForms.FormsDataUnitEditDialog
 
cancelButtonPressed() - Method in class loggerForms.FormsPlotOptionsDialog
 
cancelButtonPressed() - Method in class ltsa.LtsaDialog
 
cancelButtonPressed() - Method in class Map.MapCommentDialog
 
cancelButtonPressed() - Method in class Map.MapDetectionsDialog
 
cancelButtonPressed() - Method in class Map.MapParametersDialog
 
cancelButtonPressed() - Method in class networkTransfer.emulator.EmulateDialog
 
cancelButtonPressed() - Method in class networkTransfer.receive.NetworkReceiveDialog
 
cancelButtonPressed() - Method in class networkTransfer.send.NetworkSendDialog
 
cancelButtonPressed() - Method in class NMEA.NMEAParametersDialog
 
cancelButtonPressed() - Method in class NMEA.NMEASimDialog
 
cancelButtonPressed() - Method in class nmeaEmulator.NMEAOutdialog
 
cancelButtonPressed() - Method in class nmeaEmulator.TimesDialog
 
cancelButtonPressed() - Method in class noiseBandMonitor.NoiseBandDialog
 
cancelButtonPressed() - Method in class noiseMonitor.alarm.NoiseAlarmDialog
 
cancelButtonPressed() - Method in class noiseMonitor.NoiseDialog
 
cancelButtonPressed() - Method in class noiseMonitor.NoiseDisplayDialog
 
cancelButtonPressed() - Method in class noiseMonitor.UserBandDialog
 
cancelButtonPressed() - Method in class noiseOneBand.alarm.OneBandAlarmParamsDialog
 
cancelButtonPressed() - Method in class noiseOneBand.offline.OneBandSummaryDialog
 
cancelButtonPressed() - Method in class noiseOneBand.OneBandDialog
 
cancelButtonPressed() - Method in class noiseOneBand.OneBandDisplayDialog
 
cancelButtonPressed() - Method in class offlineProcessing.OLProcessDialog
 
cancelButtonPressed() - Method in class PamController.ModuleOrderDialog
 
cancelButtonPressed() - Method in class PamController.NewModuleDialog
 
cancelButtonPressed() - Method in class PamController.SettingsFileDialog
 
cancelButtonPressed() - Method in class PamController.StorageOptionsDialog
 
cancelButtonPressed() - Method in class PamguardMVC.dataSelector.DataSelectDialog
 
cancelButtonPressed() - Method in class pamMaths.MatrixDialog
 
cancelButtonPressed() - Method in class PamModel.DeprecatedModuleDialog
 
cancelButtonPressed() - Method in class PamModel.ThreadingDialog
 
cancelButtonPressed() - Method in class pamScrollSystem.LoadingDataDialog
 
cancelButtonPressed() - Method in class pamScrollSystem.LoadOptionsDialog
 
cancelButtonPressed() - Method in class PamUtils.LatLongDialog
 
cancelButtonPressed() - Method in class PamView.AnnotationsPopup
 
cancelButtonPressed() - Method in class PamView.hidingpanel.HidingDialog
 
cancelButtonPressed() - Method in class PamView.importData.ImportDataDialog
 
cancelButtonPressed() - Method in class PamView.ImportLoadBar
 
cancelButtonPressed() - Method in class PamView.PamDialog
called when the cancel button is pressed before the dialog closes.
cancelButtonPressed() - Method in class PamView.PamObjectList
 
cancelButtonPressed() - Method in class PamView.PamSymbolDialog
 
cancelButtonPressed() - Method in class PamView.ViewTimesDialog
 
cancelButtonPressed() - Method in class patchPanel.PatchPanelDialog
 
cancelButtonPressed() - Method in class performanceTests.PerformanceDialog
 
cancelButtonPressed() - Method in class radardisplay.RadarParametersDialog
 
cancelButtonPressed() - Method in class RightWhaleEdgeDetector.RWEDialog
 
cancelButtonPressed() - Method in class rocca.RoccaParametersDialog
 
cancelButtonPressed() - Method in class seismicVeto.VetoParametersDialog
 
cancelButtonPressed() - Method in class serialPortLogger.SerialLoggerDialog
 
cancelButtonPressed() - Method in class simulatedAcquisition.movement.GridMovementDialog
 
cancelButtonPressed() - Method in class simulatedAcquisition.SimObjectDialog
 
cancelButtonPressed() - Method in class smlGainControl.SMLGainDialog
 
cancelButtonPressed() - Method in class smlPingerControl.SMLPingerDialog
 
cancelButtonPressed() - Method in class soundPlayback.PlaybackDialog
 
cancelButtonPressed() - Method in class SoundRecorder.RecorderSettingsDialog
 
cancelButtonPressed() - Method in class SoundRecorder.trigger.TriggerOptionsDialog
 
cancelButtonPressed() - Method in class Spectrogram.SpectrogramParamsDialog
 
cancelButtonPressed() - Method in class spectrogramNoiseReduction.SpectrogramNoiseDialog
 
cancelButtonPressed() - Method in class staticLocaliser.alarm.SLAlarmOptions
 
cancelButtonPressed() - Method in class staticLocaliser.algorithms.MimplexDialog
 
cancelButtonPressed() - Method in class staticLocaliser.offline.StaticLocaliserOfflineFunctions.StaticOLProcessDialog
 
cancelButtonPressed() - Method in class staticLocaliser.panels.ExportDelaysDialog
 
cancelButtonPressed() - Method in class staticLocaliser.panels.HyperbolicLocDialog
 
cancelButtonPressed() - Method in class staticLocaliser.panels.OptionsDialog
 
cancelButtonPressed() - Method in class staticLocaliser.panels.UnsyncdataBlocks
 
cancelButtonPressed() - Method in class targetMotionModule.offline.TMOfflineFunctions.TMOLProcessDialog
 
cancelButtonPressed() - Method in class targetMotionOld.dialog.TargetMotionDialog
 
cancelButtonPressed() - Method in class tipOfTheDay.PamTipViewer
 
cancelButtonPressed() - Method in class videoRangePanel.panels.AcceptMeasurementDialog
 
cancelButtonPressed() - Method in class videoRangePanel.panels.HeightDialog
 
cancelButtonPressed() - Method in class videoRangePanel.panels.LandMarkAddDialog
 
cancelButtonPressed() - Method in class videoRangePanel.panels.LandMarkGroupDialog
 
cancelButtonPressed() - Method in class videoRangePanel.panels.ManualLocationDialog
 
cancelButtonPressed() - Method in class videoRangePanel.panels.VRCalibrationDialog
 
cancelButtonPressed() - Method in class videoRangePanel.panels.VRParametersDialog
 
cancelButtonPressed() - Method in class whistleClassifier.ClassifierTrainingDialog
 
cancelButtonPressed() - Method in class whistleClassifier.training.BatchTrainingDialog
 
cancelButtonPressed() - Method in class whistleClassifier.training.ClassifierTrainingDialog
 
cancelButtonPressed() - Method in class whistleClassifier.WhistleClassificationDialog
 
cancelButtonPressed() - Method in class whistleDetector.WhistleParametersDialog
 
cancelButtonPressed() - Method in class whistlesAndMoans.alarm.WMAlarmDialog
 
cancelButtonPressed() - Method in class whistlesAndMoans.WhistleToneDialog
 
cancelButtonPressed() - Method in class whistlesAndMoans.WMDisplayDialog
 
cancelButtonPressed() - Method in class whistlesAndMoans.WMRecordTriggerdialog
 
cancelButtonPressed() - Method in class WILDInterface.WILDParametersDialog
 
cancelButtonPressed() - Method in class WorkshopDemo.WorkshopParametersDialog
 
cancelCellEditing() - Method in class likelihoodDetectionModule.AbstractCellEditor
 
cancelDataOrder() - Method in class PamguardMVC.PamDataBlock
 
cancelLoad() - Method in interface pamScrollSystem.ViewLoadObserver
Ask the load observer if loading should be stopped.
CancelObserver - Interface in PamView
Observer to use with Pamdialog which is called whenever the cancel button is pressed.
cancelPlaybackData() - Method in interface soundPlayback.PlaybackDataServer
Cancel data loading.
cancelPressed() - Method in class difar.calibration.CalibrationDialog
 
cancelPressed() - Method in interface PamView.CancelObserver
Called whenever a PamDialog cancel button is pressed.
cancelThread() - Method in class staticLocaliser.StaticLocalise
 
canClearZoomShape(MouseEvent) - Method in class dataPlots.mouse.TDGraphZoomer
 
canClearZoomShape(MouseEvent) - Method in interface PamView.zoomer.Zoomable
 
canClearZoomShape(MouseEvent) - Method in class Spectrogram.SpectrogramZoomer
 
canClose() - Method in class clickDetector.ClickControl
 
canClose() - Method in class generalDatabase.DBControl
 
canClose() - Method in class loggerForms.FormsControl
 
canClose() - Method in class networkTransfer.receive.NetworkReceiver
 
canClose() - Method in class PamController.PamControlledUnit
Called before Pamguard shuts down.
canClose() - Method in class PamController.PamController
Can PAMGUARD shut down.
canConfigure() - Method in interface depthReadout.DepthSystem
Say whether ot not a particular sensor can be configured.
canConfigure() - Method in class depthReadout.MccDepthSystem
 
canCreate() - Method in class dataPlots.TDDisplayProvider
 
canCreate() - Method in class difar.display.DifarDisplayProvider
 
canCreate() - Method in class difar.display.DifarDisplayProvider2
 
canCreate() - Method in class Map.MapDisplayProvider
 
canCreate() - Method in class PamModel.PamModuleInfo
 
canCreate() - Method in class serialPortLogger.SerialDisplayProvider
 
canCreate() - Method in interface userDisplay.UserDisplayProvider
 
canCreate() - Method in class worldWindMap.WorldMapProvider
 
candAnimalMarker - Static variable in class videoRangePanel.vrmethods.VRLandMarkMethod
 
canDemux() - Method in class difar.DifarControl
Can the system handle demuxing the next data unit ? Currently used to enable menus on the clip display
candidateMarker - Static variable in class videoRangePanel.panels.VRPanel
 
candidateSymbol - Static variable in class videoRangePanel.panels.VRPanel
 
canDo() - Method in class alarm.actions.ActionSendEmail
 
canDo() - Method in class alarm.actions.AlarmAction
Alarm action can complete (i.e.
canDo() - Method in class alarm.actions.serial.AlarmSerialAction
 
canDo() - Method in class alarm.actions.sound.PlaySound
 
canDraw(GeneralProjector) - Method in class AirgunDisplay.AirgunGraphics
 
canDraw(GeneralProjector) - Method in class annotationMark.MarkOverlayDraw
 
canDraw(GeneralProjector) - Method in class Array.StreamerOverlayGraphics
 
canDraw(GeneralProjector) - Method in class autecPhones.AutecGraphics
 
canDraw(GeneralProjector) - Method in class beakedWhaleProtocol.BeakedExperimentGraphics
 
canDraw(GeneralProjector) - Method in class beakedWhaleProtocol.BeakedGraphics
 
canDraw(GeneralProjector) - Method in class beakedWhaleProtocol.ShoreStationGraphics
 
canDraw(GeneralProjector) - Method in class clickDetector.ClickGroupDataBlock
 
canDraw(GeneralProjector) - Method in class clipgenerator.ClipOverlayGraphics
 
canDraw(GeneralProjector) - Method in class ishmaelComms.IshmaelGraphics
 
canDraw(GeneralProjector) - Method in class landMarks.LandmarkGraphics
 
canDraw(GeneralProjector) - Method in class listening.ListeningEffortGraphics
 
canDraw(GeneralProjector) - Method in class listening.ThingHeardGraphics
 
canDraw(GeneralProjector) - Method in class loggerForms.LoggerFormGraphics
 
canDraw(GeneralProjector) - Method in class Map.MapCommentOverlayGraphics
 
canDraw(GeneralProjector) - Method in class networkTransfer.receive.NetworkGPSDrawing
 
canDraw(GeneralProjector) - Method in class PamguardMVC.PamObservable
 
canDraw(GeneralProjector) - Method in class PamView.PamDetectionOverlayGraphics
Used to tell the various displays whether or not the data in the parentDataBlock can be drawn on each of those displays.
canDraw(GeneralProjector) - Method in interface PamView.PanelOverlayDraw
 
canDraw(GeneralProjector) - Method in class simulatedAcquisition.SimGraphics
 
canDraw(GeneralProjector) - Method in class staticLocaliser.StaticLocaliserDataBlock
 
canDraw(GeneralProjector) - Method in class targetMotionModule.TargetMotionDataBlock
 
canDraw(GeneralProjector) - Method in class whistleDetector.PeakGraphics
 
canDraw(GeneralProjector) - Method in class whistleDetector.WhistleEventGraphics
 
canDrawOnMap() - Method in class loggerForms.FormDescription
 
canExecute() - Method in class PamController.command.ExtCommand
 
canHide() - Method in class clickDetector.tdPlots.ClickHidingDialog
 
canHide() - Method in class dataMap.ScalePanel
 
canHide() - Method in class dataMap.SummaryPanel
 
canHide() - Method in class dataPlots.layout.CompoundHidingDialog
 
canHide() - Method in class dataPlots.layout.TDGraphHidingDialog
 
canHide() - Method in class Map.hiddenControls.HiddenSlider
 
canHide() - Method in class PamView.hidingpanel.HidingDialogComponent
Can hide - generally this should return true if at all possible however you may need to stop it hiding if any controls are in an impossible state.
canHide() - Method in class Spectrogram.SpectrogramHidingPanel
 
canLocalise(PamDataUnit) - Method in class clickDetector.ClickDetectionMatch
Check to see whether the pamDetection has the critera required by ClickDetectionMacth to be included in localisation calculations.
canLocalise(PamDataUnit) - Method in interface PamDetection.DetectionMatchModel
Check to see if a detection can be localised as part of this detection match
canLocalise(PamDetection) - Method in class staticLocaliser.panels.ClickEventLocaliserControl
 
canLocalise(PamDetection) - Method in class staticLocaliser.panels.ClickLocaliserControl
 
canLocalise(PamDetection) - Method in interface staticLocaliser.panels.LocaliserControlModel
Checks to see if this pamDetection can be localised.
canLocalise(PamDetection) - Method in class staticLocaliser.panels.WhistleLocaliserControl
 
canLocalise(PamDetection) - Method in class staticLocaliser.StaticLocaliserControl
This is primarily used for batch analysis of data in offline mode or data in real time mode.
canLocalise(PamDetection) - Method in class targetMotionModule.panels.EventControlPanel
 
canLocalise(PamDetection) - Method in interface targetMotionModule.panels.TargetMotionControlPanel
Used primarily for offline processing.
canMark() - Method in class clipgenerator.ClipProcess
 
canMark() - Method in class IshmaelLocator.IshLocProcess
 
canMark() - Method in class rocca.RoccaWhistleSelect
 
canMark() - Method in interface Spectrogram.SpectrogramMarkObserver
 
canOpenDatabase() - Method in class generalDatabase.DBSystem
find out if it's possible to open the current databse with a host application (e.g.
canOpenDatabase() - Method in class generalDatabase.MSAccessSystem
 
canOpenDatabase() - Method in class generalDatabase.UCanAccessSystem
 
canPlayBack(float) - Method in class Acquisition.DaqSystem
 
canPlayBack(float) - Method in class Acquisition.FileInputSystem
 
canPlayBack(float) - Method in class Acquisition.SoundCardSystem
 
canPlayBack(float) - Method in class asiojni.ASIOSoundSystem
 
canPlayBack(float) - Method in class asiojni.NewAsioSoundSystem
 
canPlayBack(float) - Method in class hfDaqCard.SmruDaqSystem
 
canPlayBack(float) - Method in class nidaqdev.NIDAQProcess
 
canPlayBack(float) - Method in class simulatedAcquisition.SimProcess
 
canPlayViewerSound() - Method in class clickDetector.ClickControl
 
canPlayViewerSound() - Method in class PamController.PamControlledUnit
 
canPlayViewerSound() - Method in class userDisplay.UserDisplayControl
 
canPlayViewerSound() - Method in class userDisplay.UserDisplayTabPanelControl
 
canProcess(double, boolean) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
check that the settings can be processed at the current sample rate.
canRecord(RecorderTriggerData, long, int, float, int) - Method in class SoundRecorder.trigger.TriggerDecisionMaker
Work out whether or not a recording can be made.
canRemove() - Method in class PamModel.PamModuleInfo
 
canRun() - Method in class clickDetector.offlineFuncs.EchoDetectionTask
 
canRun() - Method in class offlineProcessing.DataCopyTask
 
canRun() - Method in class offlineProcessing.OfflineTask
can the task be run ? This will generally be true, but may be false if the task is dependent on some other module which may not be present.
canRun() - Method in class staticLocaliser.panels.LocAlgorithmControl
 
canRun() - Method in class targetMotionModule.panels.EventControlPanel
 
canRun() - Method in class targetMotionModule.panels.MapPanel2D
 
canRun() - Method in class targetMotionModule.panels.MapPanel3D
 
canRun() - Method in class targetMotionModule.panels.ModelControlPanel
 
canRun() - Method in class targetMotionModule.panels.ModelResultPanel
 
canRun() - Method in class targetMotionModule.panels.TargetMotionMainPanel
 
canRun() - Method in interface targetMotionModule.panels.TMDialogComponent
 
canRun() - Method in class targetMotionOld.dialog.DialogMap2D
 
canRun() - Method in class targetMotionOld.dialog.DialogMap3D
 
canRun() - Method in class targetMotionOld.dialog.EventControlPanel
 
canRun() - Method in class targetMotionOld.dialog.ModelControlPanel
 
canRun() - Method in class targetMotionOld.dialog.ModelResultPanel
 
canRun() - Method in class targetMotionOld.dialog.TargetMotionDialog
 
canRun() - Method in interface targetMotionOld.dialog.TMDialogComponent
 
canSample(double, int) - Method in class nidaqdev.NIDeviceInfo
 
canStartZoomArea(MouseEvent) - Method in class dataPlots.mouse.TDGraphZoomer
 
canStartZoomArea(MouseEvent) - Method in interface PamView.zoomer.Zoomable
Can a zoom area be started ?
canStartZoomArea(MouseEvent) - Method in class Spectrogram.SpectrogramZoomer
 
cascade() - Method in class PamView.PamPanelTiler
 
CdChar - Class in loggerForms.controlDescriptions
 
CdChar(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdChar
 
CdCheckbox - Class in loggerForms.controlDescriptions
 
CdCheckbox(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdCheckbox
 
CdCounter - Class in loggerForms.controlDescriptions
 
CdCounter(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdCounter
 
CdDouble - Class in loggerForms.controlDescriptions
 
CdDouble(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdDouble
 
CdInteger - Class in loggerForms.controlDescriptions
 
CdInteger(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdInteger
 
CdLatLong - Class in loggerForms.controlDescriptions
 
CdLatLong(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdLatLong
 
CdLatLongTime - Class in loggerForms.controlDescriptions
 
CdLatLongTime(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdLatLongTime
 
CdLookup - Class in loggerForms.controlDescriptions
 
CdLookup(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdLookup
 
CdNMEAChar - Class in loggerForms.controlDescriptions
 
CdNMEAChar(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdNMEAChar
 
CdNMEAFloat - Class in loggerForms.controlDescriptions
 
CdNMEAFloat(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdNMEAFloat
 
CdNMEAInt - Class in loggerForms.controlDescriptions
 
CdNMEAInt(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdNMEAInt
 
CdShort - Class in loggerForms.controlDescriptions
 
CdShort(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdShort
 
CdSingle - Class in loggerForms.controlDescriptions
 
CdSingle(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdSingle
 
CdSubForm - Class in loggerForms.controlDescriptions
Sub form control is a button which sits within the layout of a normal form and creates an additional Popup form when it's pressed, with appropriate cross referencing between the two form types.
CdSubForm(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdSubForm
 
CdTime - Class in loggerForms.controlDescriptions
 
CdTime(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdTime
 
CdTimestamp - Class in loggerForms.controlDescriptions
 
CdTimestamp(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdTimestamp
 
CdxHSpace - Class in loggerForms.controlDescriptions
 
CdxHSpace(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdxHSpace
 
CdxNewline - Class in loggerForms.controlDescriptions
 
CdxNewline(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdxNewline
 
CdxStatic - Class in loggerForms.controlDescriptions
 
CdxStatic(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdxStatic
 
CdxVSpace - Class in loggerForms.controlDescriptions
 
CdxVSpace(FormDescription, ItemInformation) - Constructor for class loggerForms.controlDescriptions.CdxVSpace
 
CENTER - Static variable in class PamView.CornerLayoutContraint
 
CENTER - Static variable in class PamView.VerticalLayout
The horizontal alignment constant that designates centering.
centreDataAt(PamDataBlock, long) - Method in class dataMap.DataMapControl
Centre the data in all data streams at the given time
centreDataAt(PamDataBlock, long) - Method in class pamScrollSystem.AbstractScrollManager
Centre all data in all data blocks at the given time
centreDataAt(PamDataBlock, long) - Method in class pamScrollSystem.RealTimeScrollManager
 
centreDataAt(PamDataBlock, long) - Method in class pamScrollSystem.ViewerScrollerManager
 
chainAnalysis - Variable in class Localiser.timeDelayLocalisers.MCMCParams
 
chainJumps - Variable in class Localiser.timeDelayLocalisers.MCMCTDResults
 
ChainStartDispersion - Variable in class Localiser.timeDelayLocalisers.MCMCParams
 
changeAmplitudeParams(SpectrogramParameters, Long) - Method in class Spectrogram.SpectrogramHidingPanel
 
changeColumnFormat(String, PamTableItem) - Method in class generalDatabase.DBProcess
Change the format of a column.
changeControlPanel() - Method in class staticLocaliser.panels.StaticLocalisationMainPanel
Change to the control panel corresponding to the selected data block.
changeControlPanel() - Method in class targetMotionModule.panels.TargetMotionMainPanel
 
CHANGED_DISPLAY_SETTINGS - Static variable in interface PamController.PamControllerInterface
Sent when display settings are changed (for instance altering of a symbol) so that graphic components can redraw.
CHANGED_MULTI_THREADING - Static variable in interface PamController.PamControllerInterface
Sent when the data model has changed between single and multi threading.
CHANGED_OFFLINE_DATASTORE - Static variable in interface PamController.PamControllerInterface
Sent when either the database or the binary store has updated and finished making a new map of its data.
CHANGED_PROCESS_SETTINGS - Static variable in interface PamController.PamControllerInterface
Should be sent by the developer when a process alters it's configuration in any way so that downstream processes can adjust acordingly
changedThreading() - Method in class PamguardMVC.PamProcess
Function that gets called in every process (or all processes that are listed in PamControlledUnits) and re-sets up the data source using the correct threading model.
changeFrequencyParams(SpectrogramParameters) - Method in class Spectrogram.SpectrogramHidingPanel
Changes the spectrogram params and recalcs spectrogram data if necessary.
changeMethod() - Method in class videoRangePanel.panels.VRPanel
 
changeMethod() - Method in class videoRangePanel.panels.VRSidePanel
 
changeMethod() - Method in class videoRangePanel.panels.VRTabPanelControl
 
changeObservers - Variable in class soundPlayback.PlaybackSystem
 
changeSelectedClick(int) - Method in class staticLocaliser.panels.ClickEventLocaliserControl
Changes the comboBox, clickPlot and current data to the ith of the current datablock
changeSettings() - Method in class Localiser.timeDelayLocalisers.Hyperbolic
 
changeSettings() - Method in class Localiser.timeDelayLocalisers.MCMC
 
changeSettings() - Method in class Localiser.timeDelayLocalisers.Simplex
 
changeSettings() - Method in interface Localiser.timeDelayLocalisers.TimeDelayLocaliserModel
Change any settings in the algorithm.
changeTDLineAppearance(Integer) - Method in class staticLocaliser.panels.LocalisationVisualisation
Sets the appearance of time delay td to red and resets the rest of the lines to blue.
ChannelAISData - Class in NMEA
AIS Data recorded in the English Channel by Richard McLanaghan of IFAW.
ChannelAISData() - Constructor for class NMEA.ChannelAISData
 
channelBitmap - Variable in class clickDetector.ClickParameters
 
channelBitmap - Variable in class Filters.FilterParameters_2
 
channelBitmap - Variable in class likelihoodDetectionModule.normalizer.BlockTimeStamp
 
channelBitmap - Variable in class noiseMonitor.NoiseSettings
 
channelBitmap - Variable in class soundPlayback.PlaybackParameters
channels to play back
channelBitMap - Variable in class SoundRecorder.RecordingInfo
 
channelChoice - Variable in class clickDetector.ClickSpectrumParams
 
channelChoices - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
channelEnabled - Variable in class difar.dataSelector.DifarSelectParameters
 
channelFilterIndex - Variable in class hfDaqCard.SmruDaqParameters
 
channelGainIndex - Variable in class hfDaqCard.SmruDaqParameters
 
channelGroups - Variable in class clickDetector.ClickParameters
 
channelGroups - Variable in class whistleDetector.WhistleParameters
 
channelIndexesToPhones(int) - Method in class PamguardMVC.ChannelListManager
Convert a bitmap of channel indexes to a bitmap of phones
channelIndexesToPhones(int[]) - Method in class PamguardMVC.ChannelListManager
Convert an array of channel indexes into an array of hydrophone numbers
channelIndexToPhone(int) - Method in class Acquisition.DAQChannelListManager
 
channelIndexToPhone(int) - Method in class PamguardMVC.ChannelListManager
 
channelIndexToPhone(int) - Method in class PamguardMVC.DefaultChannelListManager
 
channelIndexToPhone(int) - Method in class patchPanel.PatchPanelChannelList
 
ChannelIterator<E extends PamDataUnit> - Class in PamguardMVC
An iterator that has a bit more functionality than a basic iterator.
ChannelIterator(PamDataBlock<E>, int, int) - Constructor for class PamguardMVC.ChannelIterator
An iterator that has a bit more functionality than a basic iterator.
channelList - Variable in class Acquisition.AcquisitionCParameters
 
channelList - Variable in class IshmaelDetector.IshDetParams
 
channelList - Variable in class IshmaelLocator.IshLocParams
 
channelList - Variable in class KernelSmoothing.KernelSmoothingParameters
 
channelList - Variable in class Spectrogram.SpectrogramParameters
 
channelList - Variable in class spectrogramNoiseReduction.SpectrogramNoiseSettings
 
ChannelListManager - Class in PamguardMVC
Functions to convert between
ChannelListManager() - Constructor for class PamguardMVC.ChannelListManager
 
ChannelListPanel - Interface in Acquisition
Interface allowing individual devices to provide their own channel list panel.
channelMap - Variable in class dbht.DbHtParameters
Channel map for measurements.
channelMap - Variable in class decimator.DecimatorParams
 
channelMap - Variable in class envelopeTracer.EnvelopeParams
 
channelMap - Variable in class fftManager.FFTParameters
 
channelMap - Variable in class ltsa.LtsaParameters
 
channelMap - Variable in class NMEA.NMEAParameters
 
channelMap - Variable in class noiseBandMonitor.NoiseBandSettings
 
channelMap - Variable in class noiseOneBand.OneBandParameters
Channel map for measurements.
channelMap - Variable in class RightWhaleEdgeDetector.RWEParameters
 
channelMask - Variable in class hfDaqCard.SmruDaqParameters
 
channelMask() - Method in class likelihoodDetectionModule.thresholdDetector.DetectionKey
 
channelMask() - Method in class likelihoodDetectionModule.thresholdDetector.TestConsumer.EventInfo
 
channelNumberOption - Variable in class networkTransfer.receive.NetworkReceiveParams
 
ChannelPanel - Class in Array
 
channels - Variable in class staticLocaliser.StaticLocaliserParams
Channels which are used to calculate localisation results.
CHANNELS_MAINTAIN - Static variable in class networkTransfer.receive.NetworkReceiveParams
 
CHANNELS_MEANS - Static variable in class clickDetector.ClickSpectrumParams
 
CHANNELS_RENUMBER - Static variable in class networkTransfer.receive.NetworkReceiveParams
 
CHANNELS_REQUIRE_ALL - Static variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
CHANNELS_REQUIRE_ONE - Static variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
CHANNELS_SINGLE - Static variable in class clickDetector.ClickSpectrumParams
 
CHANNELS_USE_MEANS - Static variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
channelSelection - Variable in class clipgenerator.ClipGenSetting
Channel selection, all, first, one, etc.
channelSelection - Variable in class difar.DifarParameters.DifarTriggerParams
Channel selection, all, first, one, etc.
channelSelectionChanged() - Method in class clickDetector.dialogs.ClickParamsDialog
 
channelSelectionChanged() - Method in interface PamView.SourcePanelMonitor
 
channelSelTypes - Static variable in class clipgenerator.ClipGenSetting
Types of channel selection.
ChannelsToHydrophones(int) - Method in class Acquisition.AcquisitionControl
 
channelUsers(int) - Method in class Spectrogram.SpectrogramParameters
Get a bitmap of plot numbers which use a particular channel.
CharAreaControl - Class in loggerForms.controls
 
CharAreaControl(ControlDescription, LoggerForm) - Constructor for class loggerForms.controls.CharAreaControl
 
CharControl - Class in loggerForms.controls
 
CharControl(ControlDescription, LoggerForm) - Constructor for class loggerForms.controls.CharControl
 
CharPropertySet - Class in loggerForms.formdesign.controlpropsets
 
CharPropertySet(FormDescription, ControlTitle) - Constructor for class loggerForms.formdesign.controlpropsets.CharPropertySet
 
chebyGamma - Variable in class dbht.DbHtParameters
Gamma for Chebychev window.
chebyGamma - Variable in class Filters.FilterParams
 
ChebyshevMethod - Class in Filters
 
ChebyshevMethod(double, FilterParams) - Constructor for class Filters.ChebyshevMethod
 
ChebyWindow - Class in Filters
Calculates a Chebychev window for use in FOR filter design.
ChebyWindow() - Constructor for class Filters.ChebyWindow
 
checkAcousticBuoyStats(BuoyStatusDataUnit) - Method in class networkTransfer.receive.NetworkReceiver
If data units coming out of this buoy are acoustic, then it will need hydrophones.
checkAllDatagrams() - Method in class dataGram.DatagramManager
 
checkAngleFullCircle(JTextField, double, double) - Method in class WILDInterface.WILDSidePanel
Make sure the angle (bearing, is between 0 and 359.99 degrees
checkArrayChannels(Frame) - Method in class Acquisition.AcquisitionControl
Run a check to see that all read out channels are connected to a hydrophone and if not, do something about it.
checkAxis() - Method in class dataPlots.layout.TDGraph
 
checkAxisCheckBox() - Method in class dataPlots.layout.TDGraphHidingDialog
 
CheckboxControl - Class in loggerForms.controls
 
CheckboxControl(ControlDescription, LoggerForm) - Constructor for class loggerForms.controls.CheckboxControl
 
CheckBoxPropertySet - Class in loggerForms.formdesign.controlpropsets
 
CheckBoxPropertySet(FormDescription, ControlTitle) - Constructor for class loggerForms.formdesign.controlpropsets.CheckBoxPropertySet
 
checkColumn(EmptyTableDefinition, PamTableItem) - Method in class generalDatabase.DBProcess
Check a database table column exists.
checkConfig() - Method in class fftManager.newSpectrogram.SpectrogramChannelData
check the configuration of the channel data - array sizes are correct, etc.
checkContents(DStrParameters) - Method in class decimus.summarystring.DStrParameters
Checks that the contents of this matches that of dstrParameters.
checkDataLoadTime(OfflineEventDataUnit) - Method in class targetMotionModule.panels.EventControlPanel
 
checkDataLoadTime(T) - Method in class targetMotionOld.TargetMotionLocaliser
 
checkDate(GpsDataUnit) - Method in class GPS.ImportGPSData
Occasionally a completely spurious date is recorded.
checkDependency(Frame, PamDependent) - Method in class PamModel.DependencyManager
Checks through the data model and tries to find an appropriate PamDataBlock.
checkDependency(Frame, PamDependent, boolean) - Method in class PamModel.DependencyManager
Checks through the data model and tries to find an appropriate PamDataBlock.
checkDistanceFormat(JTextField) - Method in class WILDInterface.WILDSidePanel
Make sure the distance is in an integer format (no decimal places - round off if needed)
checkDualDisplay() - Method in class Layout.PamFramePlots
 
checkEnergyParamsAllocation() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
checkEventDatabase(Frame) - Method in class clickDetector.offlineFuncs.ClicksOffline
 
checkFileEnd(File, String, boolean) - Static method in class PamUtils.PamFileFilter
Checks a file end.
checkFileTime() - Method in class binaryFileStorage.BinaryStoreProcess
 
checkForAmbig(String[]) - Static method in class rocca.RoccaSightingDataUnit
Checks the passed String array for 'Ambig' (RoccaClassifier.AMBIG).
checkforFiles() - Method in class zipUnpacker.ZipUnpacker
 
checkGapPos(AbstractPamScroller, long, long, long, long, int) - Method in class pamScrollSystem.AbstractScrollManager
Check to see whether or not we are scrolling into a data gap.
checkGapPos(AbstractPamScroller, long, long, long, long, int) - Method in class pamScrollSystem.RealTimeScrollManager
 
checkGapPos(AbstractPamScroller, long, long, long, long, int) - Method in class pamScrollSystem.ViewerScrollerManager
 
checkHeader(File, boolean) - Static method in class Acquisition.WavFileFuncs
 
checkHydrophoneIds() - Method in class Array.PamArray
Ensures that hydrophone numbering in in sequential order
checkItem() - Method in class generalDatabase.lookupTables.LookupItem
Check the item has at least something in code and something in text.
checkLoggingTables() - Method in class whistleClassifier.WhistleClassifierLogging
called whenever the classifier configuration has changed so that new table columns can be created in the database.
checkLoggingTables() - Method in class whistleClassifier.WhistleClassifierProcess
Called whenever settings / species list changes to ensure that database table columns match the species list in use.
checkMaximumTime(long) - Method in class pamScrollSystem.AbstractScrollManager
Check the maximum time requested by a scroll bar doesn't go beyond the end of the data
checkMaximumTime(long) - Method in class pamScrollSystem.RealTimeScrollManager
 
checkMaximumTime(long) - Method in class pamScrollSystem.ViewerScrollerManager
 
checkMinimumTime(long) - Method in class pamScrollSystem.AbstractScrollManager
Check the minimum time requested by a scroll bar doesn't go below the start of the data
checkMinimumTime(long) - Method in class pamScrollSystem.RealTimeScrollManager
 
checkMinimumTime(long) - Method in class pamScrollSystem.ViewerScrollerManager
 
checkOutputText(String, int) - Method in interface clickDetector.offlineFuncs.DatabaseCheckObserver
 
checkPamguardTables() - Method in class clickDetector.offlineFuncs.rcImport.RainbowDatabseConverter
 
checkPartList(String, String, int) - Method in class decimus.summarystring.DStrControl
Check the parts are all listed in the controller somewhere so that plot tools can access them.
checkPath(String, boolean) - Method in class PamUtils.CheckStorageFolder
 
checkPeakFreqAllocation() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
checkPort() - Method in class smlPingerControl.PingerSerialPort
 
checkProgress(String, int, int, int) - Method in interface clickDetector.offlineFuncs.DatabaseCheckObserver
 
checkRainbowTables() - Method in class clickDetector.offlineFuncs.rcImport.RainbowDatabseConverter
 
checkRectangular(Complex[][]) - Static method in class PamUtils.MatrixOps
Check the array is rectangular, => all sub arrays are same length.
checkRectangular(double[][]) - Static method in class PamUtils.MatrixOps
 
CheckRenderer - Class in likelihoodDetectionModule
This class provides a custom renderer for a JTree that displays a check box before the standard open/closed subtree icon, and a text string for the node content.
CheckRenderer(TreeModel) - Constructor for class likelihoodDetectionModule.CheckRenderer
Instantiates a new check renderer.
CheckRenderer.TreeLabel - Class in likelihoodDetectionModule
The Class TreeLabel.
CheckRenderer.TreeLabel() - Constructor for class likelihoodDetectionModule.CheckRenderer.TreeLabel
 
checkRepeatCodes() - Method in class generalDatabase.lookupTables.LookupList
Check for repeated codes
checkRepeatslices() - Method in class whistlesAndMoans.ConnectedRegion
Check for slices repeating twice.
checkSerialPort() - Method in class smlPingerControl.SMLPingerProcess
 
checkSizes(long) - Method in class Acquisition.WavHeader
Check the two size informations in the wav file.
checkSource() - Method in class noiseOneBand.OneBandDialog
 
checkStorage() - Method in interface clickDetector.ClickFileStorage
 
checkStorage() - Method in class clickDetector.RainbowFile
 
checkStorage(String) - Static method in class clickDetector.RainbowFile
 
CheckStorageFolder - Class in PamUtils
Class for checking a storage folder exists and optionally creating it
CheckStorageFolder(String) - Constructor for class PamUtils.CheckStorageFolder
 
checkStreamers(ArrayList<PamDetection>) - Static method in class targetMotionModule.AbstractTargetMotionInformation
Check which streamer we have in the group of detections
checkSuspectEventTimes(OfflineEventDataBlock) - Method in class clickDetector.offlineFuncs.OfflineClickLogging
Check suspect offline event times for an event data block.
checkTable(EmptyTableDefinition) - Method in class generalDatabase.DBProcess
Check a database table.
checkTable() - Method in class generalDatabase.lookupTables.LookUpTables
Check the database module is present and that the lookup table exists.
checkTable(String) - Method in class landMarks.DatabaseImport
 
checkTables() - Method in class generalDatabase.DBProcess
 
checkVersion() - Method in class difar.demux.NativeDemux
 
CheckWavFileHeaders - Class in Acquisition
 
checkZCAllocation() - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
chi2 - Variable in class Localiser.timeDelayLocalisers.Simplex
 
chiSquared(ArrayList<ArrayList<Double>>, ArrayList<ArrayList<Double>>, ArrayList<ArrayList<Double>>) - Static method in class Localiser.timeDelayLocalisers.MCMC
Calculates the chi^2 value between observed data and theoretical delays calculated for a certain point in three dimensional space.
choseSampleRate() - Method in class soundPlayback.PlaybackControl
 
choseTrainingFile() - Method in class whistleClassifier.ClassifierInfoArea
select a new training file
CHUNK_DATA - Static variable in class Acquisition.WavChunkData
 
CHUNK_FMT - Static variable in class Acquisition.WavChunkData
 
CHUNK_ICOP - Static variable in class Acquisition.WavChunkData
 
CHUNK_ICRD - Static variable in class Acquisition.WavChunkData
 
CHUNK_INFO - Static variable in class Acquisition.WavChunkData
 
CHUNK_OTHER - Static variable in class Acquisition.WavChunkData
 
CHUNK_RIFF - Static variable in class Acquisition.WavChunkData
 
CHUNK_WAVE - Static variable in class Acquisition.WavChunkData
 
classBPart - Variable in class AIS.AISStaticData
 
classificationDialog(Frame) - Method in class clickDetector.ClickControl
Opens the offline click dialog.
classifier - package classifier
 
Classifier - Class in classifier
Interface for fragment classification.
Classifier() - Constructor for class classifier.Classifier
 
Classifier.ProbabilityType - Enum in classifier
Type of probability that will be returned by this classifier.
CLASSIFIER_LINEAR - Static variable in class classifier.ClassifierTypes
 
CLASSIFIER_LINEAR - Static variable in class whistleClassifier.ClassifierTypes
 
CLASSIFIER_MAHALANOBIS - Static variable in class classifier.ClassifierTypes
 
CLASSIFIER_MAHALANOBIS - Static variable in class whistleClassifier.ClassifierTypes
 
CLASSIFIER_RANDOMFORREST - Static variable in class classifier.ClassifierTypes
 
CLASSIFIER_REGRESSIONTREE - Static variable in class classifier.ClassifierTypes
 
classifierFileEnd - Static variable in class whistleClassifier.WhistleClassifierControl
File end for whistle classifier data (i.e.
ClassifierHistoryTimeAxis - Class in whistleClassifier
 
ClassifierHistoryTimeAxis(int, int, int, int, double, double, boolean, String, String) - Constructor for class whistleClassifier.ClassifierHistoryTimeAxis
 
ClassifierHistoryTimeAxis(int, int, int, int, double, double, int, String, int, String) - Constructor for class whistleClassifier.ClassifierHistoryTimeAxis
 
ClassifierHistoryWindow - Class in whistleClassifier
Provides a history window for classification results.
ClassifierHistoryWindow(WhistleClassifierControl) - Constructor for class whistleClassifier.ClassifierHistoryWindow
 
ClassifierInfoArea - Class in whistleClassifier
dialog panel to show basic information from a fragemtn classifier and to load up new classifier files.
ClassifierInfoArea(WhistleClassifierControl, WhistleClassificationDialog, Frame) - Constructor for class whistleClassifier.ClassifierInfoArea
 
ClassifierOffline - Class in whistleClassifier.offline
Some offline functions / functionality.
ClassifierOffline(WhistleClassifierControl) - Constructor for class whistleClassifier.offline.ClassifierOffline
 
ClassifierParams - Class in classifier
in an attempt to generalise the classifiers and keep them separate from anything whistle specific, use this abstract class to hold classifier specific parameters and cast it into something more concrete when it's used by a particular class;
ClassifierParams(Class) - Constructor for class classifier.ClassifierParams
 
ClassifierTrainer - Class in whistleClassifier.training
 
ClassifierTrainer(WhistleClassifierControl, TrainingDataCollection, TrainingObserver) - Constructor for class whistleClassifier.training.ClassifierTrainer
 
ClassifierTrainingDialog - Class in whistleClassifier
 
ClassifierTrainingDialog(Window, String) - Constructor for class whistleClassifier.ClassifierTrainingDialog
 
ClassifierTrainingDialog - Class in whistleClassifier.training
 
ClassifierTrainingDialog(Window, String, WhistleClassifierControl) - Constructor for class whistleClassifier.training.ClassifierTrainingDialog
 
ClassifierTrainingProgress - Class in whistleClassifier.training
 
ClassifierTrainingProgress(int, int, int) - Constructor for class whistleClassifier.training.ClassifierTrainingProgress
 
ClassifierTrainingProgress(String) - Constructor for class whistleClassifier.training.ClassifierTrainingProgress
 
ClassifierTypes - Class in classifier
Class to serve up classifier types to the Whistle classifier
ClassifierTypes() - Constructor for class classifier.ClassifierTypes
 
ClassifierTypes - Class in whistleClassifier
Class to serve up classifier types to the Whistle classifier
ClassifierTypes() - Constructor for class whistleClassifier.ClassifierTypes
 
CLASSIFY_BASIC - Static variable in class clickDetector.ClickClassifiers.ClickClassifierManager
 
CLASSIFY_BETTER - Static variable in class clickDetector.ClickClassifiers.ClickClassifierManager
 
CLASSIFY_MULTIVARIATE - Static variable in class clickDetector.ClickClassifiers.ClickClassifierManager
 
classifyContour(RoccaContourDataBlock) - Method in class rocca.RoccaClassifier
NO LONGER USED, since the addition of the RoccaRFModel object
classifyContour(RoccaClassifier, RoccaContourDataBlock) - Method in class rocca.RoccaRFModel
 
classifyContour2(RoccaContourDataBlock) - Method in class rocca.RoccaClassifier
Classifies the passed contour
ClassifyDialogPanel - Interface in clickDetector.ClickClassifiers
Click Classifiers all now share a common dialog and need to provide a common component to it.
classifyOnline - Variable in class clickDetector.ClickParameters
Run classification in real time / online ops.
classifySighting(int) - Method in class rocca.RoccaSightingDataUnit
classify the sighting, based on the tree votes.
classifySighting() - Method in class rocca.RoccaSightingDataUnit
classify the sighting, based on the tree votes.
className - Variable in class PamController.UsedModuleInfo
 
cleanFragmentedFragment() - Method in class whistlesAndMoans.ConnectedRegion
similar to condenseInfo, but for refragmetned fragments.
cleanup() - Method in class performanceTests.CPUFFTTest
 
cleanup() - Method in class performanceTests.GraphicsDotTest
 
cleanup() - Method in class performanceTests.PamguardInfo
 
cleanup() - Method in interface performanceTests.PerformanceTest
Called when dialog closes to give the test an opportunity to free andy remaining resources (close graphics windows, etc.);
cleanup() - Method in class performanceTests.SystemInfo
 
cleanUpData() - Method in class difar.DifarDataUnit
Gets called just before unit is added to processed data.
clear() - Method in class clickDetector.WindowsBuffer
totally resets, including deleting of the buffer.
clear() - Method in class dataMap.OfflineDataMap
Clear the data map.
clear() - Method in class difar.calibration.CalibrationHistogram
 
clear() - Method in class loggerForms.controls.CounterControl
 
clear() - Method in class loggerForms.controls.LoggerControl
 
clear() - Method in class loggerForms.controls.SimpleControl
 
clear() - Method in class loggerForms.UDFErrors
Clear the error list.
clear() - Method in class pamMaths.PamHistogram
Clear all histogram contents
clear() - Method in class PamView.KeyPanel
 
clearAll() - Method in class Array.HydrophoneDataBlock
 
clearAll() - Method in class Array.StreamerDataBlock
 
clearAll() - Method in class autecPhones.AutecDataBlock
 
clearAll() - Method in class clickDetector.offlineFuncs.OfflineEventDataBlock
This is generally only called from loadViwerData and since LoadviewerData only ever operates once, it should never get called !
clearAll() - Method in class difar.DifarDataBlock
 
clearAll() - Method in class difar.trackedGroups.TrackedGroupDataBlock
 
clearAll() - Method in class fftManager.FFTDataBlock
 
clearAll() - Method in class networkTransfer.receive.BuoyStatusDataBlock
 
clearAll() - Method in class PamguardMVC.PamDataBlock
Clears all PamDataUnits from memory
clearAll() - Method in class PamguardMVC.SingletonDataBlock
 
clearAll() - Method in class PamView.CtrlKeyManager
Clear all ctrl key listeners from the list.
clearAll() - Method in class rocca.RoccaLoggingDataBlock
Override the PamDataBlock clearAll() method, otherwise the detections will be erased everytime the spectrogram is run
clearAll() - Method in class rocca.RoccaSightingDataBlock
Override the PamDataBlock clearAll() method, otherwise the detections will be erased everytime the spectrogram is run
clearAll() - Method in class simulatedAcquisition.SimObjectsDataBlock
 
clearAllTrains() - Method in class clickDetector.ClickTrainDetector
 
clearAllTriggerParams() - Method in class difar.DifarParameters
Clear all trigger parameters.
clearAnimalLabels() - Method in class videoRangePanel.vrmethods.ImageRotRibbonPanel
 
clearArray() - Method in class Array.PamArray
 
clearchanged() - Method in class PamguardMVC.PamObservable
Set flag to say the data have changed
clearChannelIterators() - Method in class PamguardMVC.PamDataBlock
 
clearClipGenSettings() - Method in class clipgenerator.ClipSettings
Clear all clip generator settings.
clearClipSpecData() - Method in class clipgenerator.ClipDataUnit
Clear existing clip spectrogram data.
clearCounts() - Method in class rocca.RoccaSightingDataUnit
clear the counts for the species list
clearData() - Method in class PamUtils.LatLongDialogStrip
 
clearDataBlocks() - Method in class networkTransfer.send.NetworkSendParams
 
clearDataError() - Method in class loggerForms.controls.LoggerControl
 
clearDataWarning() - Method in class loggerForms.controls.LoggerControl
clear DataWarning field
clearDeletedList() - Method in class PamguardMVC.PamDataBlock
 
clearDraw() - Method in class clickDetector.tdPlots.ClickPlotInfo
 
clearDraw() - Method in class d3.plots.D3PlotInfo
 
clearDraw() - Method in class dataPlots.data.TDDataInfo
Clear any residual drawing objects that get held between calls, e.g.
clearExcludeList() - Method in class PamView.SourcePanel
Clear the list of excluded data blocks.
clearFileData() - Method in class Map.GebcoMapFile
 
clearFileData() - Method in interface Map.MapFileManager
 
clearFitData() - Method in class Localiser.bearingLocaliser.GroupDetection
 
clearFragmentStore(long) - Method in class whistleClassifier.WhistleClassifierProcess
 
clearGraph() - Method in class staticLocaliser.panels.LocalisationVisualisation
 
clearGraphicsGroup() - Method in class PamGraph3D.PamPanel3D
 
clearHorizonInfo() - Method in class videoRangePanel.vrmethods.ImageAnglePanel
 
clearHoverList() - Method in class PamView.GeneralProjector
Any display that is using click hovering should call this at the start of their paintComponent(Graphics g) function.
clearImage() - Method in class Layout.DisplayPanel
Clear the entire image
clearImage(int, int) - Method in class Layout.DisplayPanel
Clear part of the image between x1 and x2
clearImage(int, int, boolean) - Method in class Layout.DisplayPanel
Clear part of the image and draw a line just to the right of the cleared section
clearImageLabels() - Method in class videoRangePanel.vrmethods.ImageRotRibbonPanel
 
clearInstance() - Static method in class Acquisition.AcquisitionDialog
Clear the static instance so that the dialog is totally rebuilt next time it's launched.
clearLatestShape() - Method in class PamView.zoomer.Zoomer
 
clearLocSymbols() - Method in class staticLocaliser.panels.MapPanel3DSL
Remove all children from pickGroup
clearMessages() - Method in interface whistleClassifier.training.MessageArea
 
clearMetadata() - Method in class videoRangePanel.panels.VRMetaDataPanel
 
clearMiscSymbols() - Method in class staticLocaliser.panels.MapPanel3DSL
Remove all children from symbGroup
clearOandAngles() - Method in class PamguardMVC.PamDataUnit
 
clearOldData() - Method in class AIS.ProcessAISData
 
clearOldData() - Method in class difar.DifarProcess
 
clearOldData() - Method in class GPS.ProcessNmeaData
 
clearOldData() - Method in class PamguardMVC.PamProcess
Clears all data from all output data blocks of this process.
clearOldData() - Method in class whistleDetector.WhistleEventDetector
 
clearOldDataBlock() - Method in class rocca.RoccaContour
 
clearOverlay() - Method in class videoRangePanel.vrmethods.AddCalibrationMethod
 
clearOverlay() - Method in class videoRangePanel.vrmethods.IMUMethod
 
clearOverlay() - Method in class videoRangePanel.vrmethods.VRHorizonMethod
 
clearOverlay() - Method in class videoRangePanel.vrmethods.VRLandMarkMethod
 
clearOverlay() - Method in interface videoRangePanel.vrmethods.VRMethod
Clears all user ineractions and resets overlay.
clearOverlay() - Method in class videoRangePanel.vrmethods.VRShoreMethod
 
clearPanel() - Method in class videoRangePanel.vrmethods.ImageAnglePanel
Clears all text on the panel
clearProcessedDataAtStart - Variable in class difar.DifarParameters
 
clearQueueAtStart - Variable in class difar.DifarParameters
 
clearQueuePanel() - Method in class difar.display.DIFARQueuePanel
 
clearResults() - Method in class Localiser.timeDelayLocalisers.MCMC
Clear the results from memory.
clearResults() - Method in class targetMotionModule.TargetMotionLocaliser
 
clearResults() - Method in class targetMotionOld.TargetMotionLocaliser
 
clearRotateGroup() - Method in class PamGraph3D.PamPanel3D
 
clearSelectedDataUnits() - Method in class dataPlots.layout.TDGraph
Clear all selected data units.
clearSettings() - Method in class spectrogramNoiseReduction.SpectrogramNoiseSettings
 
clearSpeciesCount() - Method in class rocca.RoccaSidePanel.SidePanel
 
clearSpeciesList() - Method in class rocca.RoccaClassifier
 
clearStore() - Method in class whistleClassifier.BasicFragmentStore
 
clearStore() - Method in interface whistleClassifier.FragmentStore
Clear the store of existing data.
clearStore() - Method in class whistleClassifier.HistoFragmentStore
 
clearStore() - Method in class whistleClassifier.training.TrainingDataCollection
 
clearStore() - Method in class whistleClassifier.TrainingDataCollection
 
clearTable(EmptyTableDefinition) - Method in class generalDatabase.DBProcess
Completely clear the contents of a table
clearTable(String) - Method in class generalDatabase.DBProcess
 
clearTemplates() - Method in class clickDetector.ClickSpectrum
 
clearUpdateCount() - Method in class PamguardMVC.PamDataUnit
Do a clear of update count after a database save.
CLICK_CLICK - Static variable in class clickDetector.ClickDetection
 
CLICK_DETECTOR_CLICK - Static variable in class clickDetector.ClickBinaryDataSource
Module version changes Version 2: Add int clickFlags after short clickType
CLICK_FLAG_ECHO - Static variable in class clickDetector.ClickDetection
 
CLICK_NOISEWAVE - Static variable in class clickDetector.ClickDetection
 
ClickAlarm - Class in clickDetector
Alarm object for the Click Alarm
ClickAlarm() - Constructor for class clickDetector.ClickAlarm
Constructor with no passed name - just use the default name
ClickAlarm(String) - Constructor for class clickDetector.ClickAlarm
Constructor used to set the name of the new alarm.
ClickAlarmCounter - Class in clickDetector.alarm
 
ClickAlarmCounter(AlarmControl, ClickControl) - Constructor for class clickDetector.alarm.ClickAlarmCounter
 
ClickAlarmDialog - Class in clickDetector.alarm
 
ClickAlarmDialog(Window, ClickControl) - Constructor for class clickDetector.alarm.ClickAlarmDialog
 
ClickAlarmDialog - Class in clickDetector.dialogs
 
ClickAlarmDialog.SoundFilter - Class in clickDetector.dialogs
 
ClickAlarmDialog.SoundFilter() - Constructor for class clickDetector.dialogs.ClickAlarmDialog.SoundFilter
 
clickAlarmList - Variable in class clickDetector.ClickParameters
 
ClickAlarmManager - Class in clickDetector
 
ClickAlarmManager(ClickControl, PamDataBlock<ClickDetection>) - Constructor for class clickDetector.ClickAlarmManager
Main Constructor
ClickAlarmParameters - Class in clickDetector.alarm
 
ClickAlarmParameters() - Constructor for class clickDetector.alarm.ClickAlarmParameters
 
ClickAlarmProvider - Class in clickDetector.alarm
 
ClickAlarmProvider(ClickControl) - Constructor for class clickDetector.alarm.ClickAlarmProvider
 
ClickBearingTask - Class in clickDetector.offlineFuncs
 
ClickBearingTask(ClickControl) - Constructor for class clickDetector.offlineFuncs.ClickBearingTask
 
ClickBinaryDataSource - Class in clickDetector
Class for storing clicks to binary store.
ClickBinaryDataSource(ClickDetector, PamDataBlock, String) - Constructor for class clickDetector.ClickBinaryDataSource
 
ClickBinaryInfo - Class in clickDetector
Class for managing extra binary info for click detector binary files.
ClickBinaryInfo() - Constructor for class clickDetector.ClickBinaryInfo
 
ClickBinaryModuleFooter - Class in clickDetector
 
ClickBinaryModuleFooter(ClickDetector) - Constructor for class clickDetector.ClickBinaryModuleFooter
 
ClickBinaryModuleHeader - Class in clickDetector
 
ClickBinaryModuleHeader(int) - Constructor for class clickDetector.ClickBinaryModuleHeader
 
ClickBTDisplay - Class in clickDetector
This is the main bearing time display for the click detector.
ClickBTDisplay(ClickControl, ClickDisplayManager, ClickDisplayManager.ClickDisplayInfo) - Constructor for class clickDetector.ClickBTDisplay
 
ClickBTDisplay.FollowBoxListener - Class in clickDetector
 
ClickBTDisplay.FollowBoxListener() - Constructor for class clickDetector.ClickBTDisplay.FollowBoxListener
 
ClickBTDisplay.PlotKeyListener - Class in clickDetector
 
ClickBTDisplay.PlotKeyListener() - Constructor for class clickDetector.ClickBTDisplay.PlotKeyListener
 
ClickClassifierManager - Class in clickDetector.ClickClassifiers
 
ClickClassifierManager(ClickControl) - Constructor for class clickDetector.ClickClassifiers.ClickClassifierManager
 
clickClassifierType - Variable in class clickDetector.ClickParameters
 
ClickClassifyDialog - Class in clickDetector.ClickClassifiers
 
ClickColoursPanel - Class in clickDetector.dialogs
Simple panel to offer the three basic colour options for clicks - colour by species, train or both.
ClickColoursPanel(String) - Constructor for class clickDetector.dialogs.ClickColoursPanel
 
ClickControl - Class in clickDetector
Main Controller for click detection.
ClickControl(String) - Constructor for class clickDetector.ClickControl
 
ClickControlParams - Class in staticLocaliser
 
ClickControlParams() - Constructor for class staticLocaliser.ClickControlParams
 
ClickDataBlock - Class in clickDetector
 
ClickDataBlock(ClickControl, PamProcess, int) - Constructor for class clickDetector.ClickDataBlock
 
ClickDatagramProvider - Class in clickDetector
 
ClickDatagramProvider(ClickControl) - Constructor for class clickDetector.ClickDatagramProvider
 
ClickDatagramUnit - Static variable in class difar.DIFARMessage
Called when the datagram is clicked with the mouse.
ClickDataSelectCreator - Class in clickDetector.dataSelector
 
ClickDataSelectCreator(ClickControl, ClickDataBlock) - Constructor for class clickDetector.dataSelector.ClickDataSelectCreator
 
ClickDataSelector - Class in clickDetector.dataSelector
 
ClickDataSelector(ClickControl, ClickDataBlock, String, boolean) - Constructor for class clickDetector.dataSelector.ClickDataSelector
 
ClickDelayTask - Class in clickDetector.offlineFuncs
 
ClickDelayTask(ClickControl) - Constructor for class clickDetector.offlineFuncs.ClickDelayTask
 
ClickDetection - Class in clickDetector
Class for Click Detector clicks.
ClickDetection(int, long, long, ClickDetector, ClickDetector.ChannelGroupDetector, int) - Constructor for class clickDetector.ClickDetection
 
ClickDetection(ClickDetector) - Constructor for class clickDetector.ClickDetection
 
ClickDetectionMatch - Class in clickDetector
Click Detection match is used to match clicks on different channels and calc time delays.
ClickDetectionMatch(ClickDetection) - Constructor for class clickDetector.ClickDetectionMatch
 
ClickDetectionMatch(ClickDetection, Integer) - Constructor for class clickDetector.ClickDetectionMatch
 
clickDetector - package clickDetector
 
ClickDetector - Class in clickDetector
Main click detector process.
ClickDetector(ClickControl) - Constructor for class clickDetector.ClickDetector
 
clickDetector.alarm - package clickDetector.alarm
 
ClickDetector.ChannelGroupDetector - Class in clickDetector
 
ClickDetector.ChannelGroupDetector(int, int) - Constructor for class clickDetector.ClickDetector.ChannelGroupDetector
 
clickDetector.ClickClassifiers - package clickDetector.ClickClassifiers
 
clickDetector.ClickClassifiers.basic - package clickDetector.ClickClassifiers.basic
 
clickDetector.ClickClassifiers.basicSweep - package clickDetector.ClickClassifiers.basicSweep
 
clickDetector.dataSelector - package clickDetector.dataSelector
 
clickDetector.dialogs - package clickDetector.dialogs
 
clickDetector.echoDetection - package clickDetector.echoDetection
 
clickDetector.offlineFuncs - package clickDetector.offlineFuncs
 
clickDetector.offlineFuncs.rcImport - package clickDetector.offlineFuncs.rcImport
 
clickDetector.tdPlots - package clickDetector.tdPlots
 
clickDetector.waveCorrector - package clickDetector.waveCorrector
 
ClickDisplay - Class in clickDetector
Common functionality for all display windows in the click detector panel
ClickDisplay(ClickControl, ClickDisplayManager, ClickDisplayManager.ClickDisplayInfo) - Constructor for class clickDetector.ClickDisplay
 
ClickDisplayDialog - Class in clickDetector.dialogs
Dialog for basic click display parameters
ClickDisplayManager - Class in clickDetector
 
ClickDisplayManager(ClickControl, ClickTabPanelControl) - Constructor for class clickDetector.ClickDisplayManager
 
ClickDisplayManagerParameters - Class in clickDetector
 
ClickDisplayManagerParameters() - Constructor for class clickDetector.ClickDisplayManagerParameters
 
ClickDisplayManagerParameters2 - Class in clickDetector
 
ClickDisplayManagerParameters2() - Constructor for class clickDetector.ClickDisplayManagerParameters2
 
clickedOnClick(ClickDetection) - Method in class clickDetector.ClickBTDisplay
 
clickedOnClick(ClickDetection) - Method in class clickDetector.ClickDisplay
 
clickedOnClick(ClickDetection) - Method in class clickDetector.ClickSpectrum
 
clickedOnClick(ClickDetection) - Method in class clickDetector.ClickWaveform
 
clickedOnClick(ClickDetection) - Method in class clickDetector.ConcatenatedSpectrogram
 
clickedOnClick(ClickDetection) - Method in class clickDetector.WignerPlot
 
ClickEventLocaliserControl - Class in staticLocaliser.panels
Panel for selecting a detection from the the offline click data block.
ClickEventLocaliserControl(StaticLocaliserControl) - Constructor for class staticLocaliser.panels.ClickEventLocaliserControl
 
ClickEventLocaliserControl.ClickPlotPanelEvent - Class in staticLocaliser.panels
Creates a plot of the current click waveform.
ClickEventLocaliserControl.ClickPlotPanelEvent() - Constructor for class staticLocaliser.panels.ClickEventLocaliserControl.ClickPlotPanelEvent
 
ClickFileStorage - Interface in clickDetector
 
ClickGroupDataBlock<t extends GroupDetection> - Class in clickDetector
Click Train data block deletes old data in a slightly different way to PamDataBlock.
ClickGroupDataBlock(Class, String, PamProcess, int) - Constructor for class clickDetector.ClickGroupDataBlock
 
ClickGroupDetection - Class in clickDetector
 
ClickGroupDetection(ClickDetection) - Constructor for class clickDetector.ClickGroupDetection
 
ClickGroupGraphics - Class in clickDetector
Deprecated.
ClickGroupGraphics(ClickControl, PamDataBlock, int, String) - Constructor for class clickDetector.ClickGroupGraphics
Deprecated.
 
ClickGroupLogging - Class in clickDetector
 
ClickGroupLogging(PamDataBlock, int) - Constructor for class clickDetector.ClickGroupLogging
 
ClickHidingDialog - Class in clickDetector.tdPlots
 
ClickHidingDialog(ClickPlotInfo) - Constructor for class clickDetector.tdPlots.ClickHidingDialog
 
ClickIdentifier - Interface in clickDetector.ClickClassifiers
 
ClickIdInformation - Class in clickDetector.ClickClassifiers
 
ClickIdInformation(int, boolean) - Constructor for class clickDetector.ClickClassifiers.ClickIdInformation
 
ClickIdInformation(int) - Constructor for class clickDetector.ClickClassifiers.ClickIdInformation
 
ClickImportLogging - Class in clickDetector.offlineFuncs.rcImport
 
ClickImportLogging(ClickControl) - Constructor for class clickDetector.offlineFuncs.rcImport.ClickImportLogging
 
clickLength(double) - Method in class clickDetector.ClickDetection
Calculates the length of a click in seconds averaged over all channels
clickLength(int, double) - Method in class clickDetector.ClickDetection
Calculates the length of a click in seconds for a particular channel
clickLength - Variable in class clickDetector.ClickTypeParams
 
clickLength(double) - Method in class clickDetector.OldClickClass
Calculates the length of a click in seconds averaged over all channels
clickLength(int, double) - Method in class clickDetector.OldClickClass
Calculates the length of a click in seconds for a particular channel
ClickLocalisation - Class in clickDetector
 
ClickLocalisation(ClickDetection, int, int, int, PamVector[]) - Constructor for class clickDetector.ClickLocalisation
 
ClickLocaliserControl - Class in staticLocaliser.panels
 
ClickLocaliserControl(StaticLocaliserControl) - Constructor for class staticLocaliser.panels.ClickLocaliserControl
 
ClickLogger - Class in clickDetector
Databse logging information for Clicks.
ClickLogger(ClickControl, PamDataBlock) - Constructor for class clickDetector.ClickLogger
 
ClickMapDialog - Class in clickDetector.dialogs
Dialog for controlling which clicks and click trains get displayed on the map.
ClickMapDrawing - Class in clickDetector
 
ClickMapDrawing(ClickDetector) - Constructor for class clickDetector.ClickMapDrawing
 
ClickParameters - Class in clickDetector
 
ClickParameters() - Constructor for class clickDetector.ClickParameters
 
ClickParamsDialog - Class in clickDetector.dialogs
Dialog for click detection parameters.
ClickPlotInfo - Class in clickDetector.tdPlots
 
ClickPlotInfo(TDDataProvider, ClickControl, TDGraph, PamDataBlock) - Constructor for class clickDetector.tdPlots.ClickPlotInfo
 
ClickPlotProvider - Class in clickDetector.tdPlots
 
ClickPlotProvider(ClickControl, PamDataBlock) - Constructor for class clickDetector.tdPlots.ClickPlotProvider
 
clickPower - Variable in class fftManager.FFTParameters
 
ClickReClassifyTask - Class in clickDetector.offlineFuncs
 
ClickReClassifyTask(ClickControl) - Constructor for class clickDetector.offlineFuncs.ClickReClassifyTask
 
ClickRecorderTrigger - Class in clickDetector
 
ClickRecorderTrigger(ClickControl) - Constructor for class clickDetector.ClickRecorderTrigger
 
ClickRecorderTriggerData - Class in clickDetector
 
ClickRecorderTriggerData(ClickControl) - Constructor for class clickDetector.ClickRecorderTriggerData
 
ClickRemoval - Class in fftManager
Function to remove clicks from blocks of data.
ClickRemoval() - Constructor for class fftManager.ClickRemoval
 
clickRemoval - Variable in class fftManager.FFTParameters
 
ClickSelectPanel - Class in clickDetector.dataSelector
 
ClickSelectPanel(ClickDataSelector, boolean) - Constructor for class clickDetector.dataSelector.ClickSelectPanel
 
ClickSidePanel - Class in clickDetector
 
ClickSidePanel(ClickControl) - Constructor for class clickDetector.ClickSidePanel
 
ClickSidePanel.SidePanel - Class in clickDetector
The actual side panel.
ClickSidePanel.SidePanel() - Constructor for class clickDetector.ClickSidePanel.SidePanel
 
ClicksOffline - Class in clickDetector.offlineFuncs
Functions for handling offline data display and processing.
ClicksOffline(ClickControl) - Constructor for class clickDetector.offlineFuncs.ClicksOffline
Constructor, called from ClickControl.
ClickSound - Class in simulatedAcquisition.sounds
Generate short click like sounds.
ClickSound(String, double, double, double, ClickSound.WINDOWTYPE) - Constructor for class simulatedAcquisition.sounds.ClickSound
 
ClickSpectrogramPlugin - Class in clickDetector
The implementation of DisplayPanelProvider should be created as a single instance (or one for each instance of the detector which has this display).
ClickSpectrogramPlugin(ClickControl) - Constructor for class clickDetector.ClickSpectrogramPlugin
The constructor stores a reference to the click detector and registers with the DisplayProviderList.
ClickSpectrum - Class in clickDetector
 
ClickSpectrum(ClickControl, ClickDisplayManager, ClickDisplayManager.ClickDisplayInfo) - Constructor for class clickDetector.ClickSpectrum
 
ClickSpectrumDialog - Class in clickDetector
 
ClickSpectrumParams - Class in clickDetector
 
ClickSpectrumParams() - Constructor for class clickDetector.ClickSpectrumParams
 
ClickSpectrumTemplateDialog - Class in clickDetector
 
ClickSpectrumTemplateDialog(Window, Point) - Constructor for class clickDetector.ClickSpectrumTemplateDialog
 
ClickSpectrumTemplateEditDialog - Class in clickDetector
The edit template dialog allows users to create mean spectrums from marked out events.
ClickSpectrumTemplateEditDialog(Window, Point, ClickControl) - Constructor for class clickDetector.ClickSpectrumTemplateEditDialog
 
ClickSpectrumTemplateParams - Class in clickDetector
 
ClickSpectrumTemplateParams() - Constructor for class clickDetector.ClickSpectrumTemplateParams
 
ClickStorageOptionsDialog - Class in clickDetector.dialogs
 
ClickSymbolChooser - Class in clickDetector.tdPlots
 
ClickSymbolChooser(ClickControl, ClickPlotInfo) - Constructor for class clickDetector.tdPlots.ClickSymbolChooser
 
ClickTabPanel - Class in clickDetector
 
ClickTabPanel(ClickTabPanelControl, ClickControl) - Constructor for class clickDetector.ClickTabPanel
 
ClickTabPanelControl - Class in clickDetector
 
ClickTabPanelControl.ArrangeWindows - Class in clickDetector
 
ClickTabPanelControl.ArrangeWindows(Frame) - Constructor for class clickDetector.ClickTabPanelControl.ArrangeWindows
 
ClickTabPanelControl.MapOptions - Class in clickDetector
 
ClickTabPanelControl.MapOptions(Frame) - Constructor for class clickDetector.ClickTabPanelControl.MapOptions
 
ClickTabPanelControl.OverlayOptions - Class in clickDetector
 
ClickTabPanelControl.OverlayOptions(Frame) - Constructor for class clickDetector.ClickTabPanelControl.OverlayOptions
 
ClickTemplate - Class in clickDetector
Class for storing click templates.
ClickTemplate() - Constructor for class clickDetector.ClickTemplate
 
ClickTemplate(ArrayList<Double>, ArrayList<Double>, ArrayList<Double>, ArrayList<Double>, float, String) - Constructor for class clickDetector.ClickTemplate
 
ClickTemplate(ArrayList<Double>, ArrayList<Double>, ArrayList<Double>, ArrayList<Double>, float, String, Color) - Constructor for class clickDetector.ClickTemplate
 
clickThreshold - Variable in class fftManager.FFTParameters
 
ClickToolBar - Class in clickDetector
 
ClickToolBar(ClickTabPanelControl) - Constructor for class clickDetector.ClickToolBar
 
ClickTrainDataBlock - Class in clickDetector
 
ClickTrainDataBlock(ClickControl, String, PamProcess, int) - Constructor for class clickDetector.ClickTrainDataBlock
 
ClickTrainDetection - Class in clickDetector
 
ClickTrainDetector - Class in clickDetector
 
ClickTrainGraphics - Class in clickDetector
 
ClickTrainIdDialog - Class in clickDetector.dialogs
 
ClickTrainLocalisation - Class in clickDetector
 
ClickTrainLocalisation(ClickTrainDetection, int) - Constructor for class clickDetector.ClickTrainLocalisation
 
ClickTrainLocalisationGraphics - Class in clickDetector
 
ClickTrainLocalisationGraphics(ClickControl, PamDataBlock) - Constructor for class clickDetector.ClickTrainLocalisationGraphics
 
ClickTrainLogger - Class in clickDetector
 
ClickTrainLogger(ClickGroupDataBlock, ClickControl, ClickTrainDetector) - Constructor for class clickDetector.ClickTrainLogger
 
ClickTrigger - Class in clickDetector
 
ClickTrigger(ClickControl, ClickDisplayManager, ClickDisplayManager.ClickDisplayInfo) - Constructor for class clickDetector.ClickTrigger
 
ClickTriggerFunctionDataBlock - Class in clickDetector
 
ClickTriggerFunctionDataBlock(String, ClickDetector, int, float) - Constructor for class clickDetector.ClickTriggerFunctionDataBlock
 
clickType - Variable in class clickDetector.ClickClassifiers.ClickIdInformation
 
ClickTypeCommonParams - Class in clickDetector.ClickClassifiers
Superclass for click parameters, including the ClickTypeParms and SweepClassifierSet classes.
ClickTypeCommonParams() - Constructor for class clickDetector.ClickClassifiers.ClickTypeCommonParams
 
ClickTypeDialog - Class in clickDetector.ClickClassifiers.basic
 
clickTypeParams - Variable in class clickDetector.BasicClickIdParameters
 
ClickTypeParams - Class in clickDetector
 
ClickTypeParams(int) - Constructor for class clickDetector.ClickTypeParams
 
ClickTypeParams(int, int) - Constructor for class clickDetector.ClickTypeParams
 
ClickTypesDialog - Class in clickDetector.ClickClassifiers
 
ClickWaveform - Class in clickDetector
 
ClickWaveform(ClickControl, ClickDisplayManager, ClickDisplayManager.ClickDisplayInfo) - Constructor for class clickDetector.ClickWaveform
 
Client - Class in ishmaelComms
 
Client() - Constructor for class ishmaelComms.Client
 
ClipBinaryDataSource - Class in clipgenerator
 
ClipBinaryDataSource(ClipControl, ClipDisplayDataBlock) - Constructor for class clipgenerator.ClipBinaryDataSource
 
ClipboardCopier - Class in PamView
Class to Copy graphics content to the clipboard and the printer
ClipboardCopier(Component) - Constructor for class PamView.ClipboardCopier
 
ClipboardCopier(Component, String) - Constructor for class PamView.ClipboardCopier
 
ClipboardCopier3D - Class in PamView
 
ClipboardCopier3D(PamPanel3D) - Constructor for class PamView.ClipboardCopier3D
 
ClipControl - Class in clipgenerator
The clip generator is used to generate short sound clips around detections.
ClipControl(String) - Constructor for class clipgenerator.ClipControl
 
ClipDataBlock - Class in clipgenerator
 
ClipDataBlock(String, PamProcess, int) - Constructor for class clipgenerator.ClipDataBlock
 
ClipDataProjector - Class in clipgenerator.clipDisplay
 
ClipDataProjector(ClipDisplayPanel) - Constructor for class clipgenerator.clipDisplay.ClipDataProjector
 
ClipDataUnit - Class in clipgenerator
 
ClipDataUnit(long, long, long, int, int, String, String, double[][], float) - Constructor for class clipgenerator.ClipDataUnit
Constructor to use if storing data into the binary system.
ClipDelays - Class in clipgenerator.localisation
Class for calculating clip delays when clip has multiple channels of data.
ClipDelays(ClipControl) - Constructor for class clipgenerator.localisation.ClipDelays
 
ClipDialog - Class in clipgenerator
 
ClipDialog(Window, ClipControl) - Constructor for class clipgenerator.ClipDialog
 
ClipDisplayDataBlock<TUnit extends ClipDataUnit> - Class in clipgenerator
Really basic class for clip data blocks, which can be used by the Clip display (which is now incorporated into other modules, such as the DIFAR module).
ClipDisplayDataBlock(Class, String, PamProcess, int) - Constructor for class clipgenerator.ClipDisplayDataBlock
 
ClipDisplayDecorations - Class in clipgenerator.clipDisplay
 
ClipDisplayDecorations(ClipDisplayUnit) - Constructor for class clipgenerator.clipDisplay.ClipDisplayDecorations
 
ClipDisplayDialog - Class in clipgenerator
 
ClipDisplayPanel - Class in clipgenerator.clipDisplay
Clip display panel.
ClipDisplayPanel(ClipDisplayParent) - Constructor for class clipgenerator.clipDisplay.ClipDisplayPanel
 
ClipDisplayParameters - Class in clipgenerator.clipDisplay
 
ClipDisplayParameters() - Constructor for class clipgenerator.clipDisplay.ClipDisplayParameters
 
ClipDisplayParent - Interface in clipgenerator.clipDisplay
A set of functions that can be used to add additional items to a clip display unit.
ClipDisplayUnit - Class in clipgenerator.clipDisplay
Graphic component for a single clip display.
ClipDisplayUnit(ClipDisplayPanel, ClipDataUnit, PamDataUnit) - Constructor for class clipgenerator.clipDisplay.ClipDisplayUnit
 
clipgenerator - package clipgenerator
 
clipgenerator.clipDisplay - package clipgenerator.clipDisplay
 
clipgenerator.localisation - package clipgenerator.localisation
 
ClipGenSetting - Class in clipgenerator
Settings for a clip generator - which can be triggered by any AcousticDataUnit.
ClipGenSetting(String) - Constructor for class clipgenerator.ClipGenSetting
 
ClipGenSettingDialog - Class in clipgenerator
 
ClipLayout - Class in clipgenerator.clipDisplay
 
ClipLayout() - Constructor for class clipgenerator.clipDisplay.ClipLayout
 
ClipLayout(int, int, int) - Constructor for class clipgenerator.clipDisplay.ClipLayout
 
ClipLayout(int) - Constructor for class clipgenerator.clipDisplay.ClipLayout
 
ClipLocalisation - Class in clipgenerator.localisation
Use the same localisation information as for whistles.
ClipLocalisation(PamDataUnit, BearingLocaliser, int, double[][]) - Constructor for class clipgenerator.localisation.ClipLocalisation
 
ClipOverlayGraphics - Class in clipgenerator
 
ClipOverlayGraphics(ClipControl, ClipDataBlock) - Constructor for class clipgenerator.ClipOverlayGraphics
 
ClipPlayback - Class in soundPlayback
Some static functions to playback sound clips.
clipPrefix - Variable in class clipgenerator.ClipGenSetting
prefix for the clip (ahead of the date string).
ClipProcess - Class in clipgenerator
Process for making short clips of audio data.
ClipProcess(ClipControl) - Constructor for class clipgenerator.ClipProcess
 
ClipProcess.ClipBlockProcess - Class in clipgenerator
 
ClipProcess.ClipBlockProcess(ClipProcess, PamDataBlock, ClipGenSetting) - Constructor for class clipgenerator.ClipProcess.ClipBlockProcess
 
ClipProcess.ClipRequest - Class in clipgenerator
Data needed for a clip request.
ClipProcess.ClipRequest(ClipProcess.ClipBlockProcess, PamDataUnit) - Constructor for class clipgenerator.ClipProcess.ClipRequest
 
ClipSettings - Class in clipgenerator
General clip gen settings (file location, etc.
ClipSettings() - Constructor for class clipgenerator.ClipSettings
 
ClipSpectrogramMark - Class in clipgenerator
 
ClipSpectrogramMark(long, int, long, long, double[]) - Constructor for class clipgenerator.ClipSpectrogramMark
 
ClipSpectrogramMarkDataBlock - Class in clipgenerator
This is just a dummy datablock to fool the Clips dialog into showing options for the clips from spectrogram marks.
ClipSpectrogramMarkDataBlock(PamProcess, int) - Constructor for class clipgenerator.ClipSpectrogramMarkDataBlock
 
ClipTabPanel - Class in clipgenerator.clipDisplay
 
ClipTabPanel(ClipControl) - Constructor for class clipgenerator.clipDisplay.ClipTabPanel
 
clockError - Variable in class Acquisition.DaqStatusDataUnit
 
clone() - Method in class Acquisition.SoundCardParameters
 
clone() - Method in class AirgunDisplay.AirgunParameters
 
clone() - Method in class amplifier.AmpParameters
 
clone() - Method in class angleMeasurement.AngleLoggingParameters
 
clone() - Method in class angleVetoes.AngleVeto
 
clone() - Method in class angleVetoes.AngleVetoParameters
 
clone() - Method in class Array.EmptyLocatorSettings
 
clone() - Method in class Array.importHydrophoneData.StreamerImportParams
 
clone() - Method in class Array.LocatorSettings
 
clone() - Method in class Array.PamArray
 
clone() - Method in class Array.Preamplifier
 
clone() - Method in class Array.streamerOrigin.OriginSettings
 
clone() - Method in class Array.streamerOrigin.StaticOriginSettings
 
clone() - Method in class beakedWhaleProtocol.BeakedParameters
 
clone() - Method in class classifier.GroupMeans
 
clone() - Method in class clickDetector.alarm.ClickAlarmParameters
 
clone() - Method in class clickDetector.BasicClickIdParameters
 
clone() - Method in class clickDetector.BTDisplayParameters
 
clone() - Method in class clickDetector.ClickAlarm
 
clone() - Method in class clickDetector.ClickDisplayManagerParameters
 
clone() - Method in class clickDetector.ClickDisplayManagerParameters2
 
clone() - Method in class clickDetector.ClickParameters
 
clone() - Method in class clickDetector.ClickRecorderTriggerData
 
clone() - Method in class clickDetector.ClickTypeParams
 
clone() - Method in class clipgenerator.ClipSettings
 
clone() - Method in class dataGram.DatagramSettings
 
clone() - Method in class dataMap.OfflineDataMapPoint
 
clone() - Method in class dbht.DbHtParameters
 
clone() - Method in class decimus.summarystring.DStrModulePartInfo
 
clone() - Method in class decimus.summarystring.DStrParameters
 
clone() - Method in class depthReadout.DepthParameters
 
clone() - Method in class depthReadout.MccDepthParameters
 
clone() - Method in class difar.dataSelector.DifarSelectParameters
 
clone() - Method in class difar.demux.GreenridgeParams
 
clone() - Method in class difar.DifarParameters
 
clone() - Method in class difar.DifarParameters.SpeciesParams
 
clone() - Method in class fftFilter.FFTFilterParams
 
clone() - Method in class fftManager.Complex
 
clone() - Method in class Filters.FilterParameters_2
 
clone() - Method in class Filters.FilterParams
 
clone() - Method in class generalDatabase.DBParameters
 
clone() - Method in class GPS.GpsData
 
clone() - Method in class GPS.GPSParameters
 
clone() - Method in class GPS.ImportGPSParams
 
clone() - Method in class hfDaqCard.SmruDaqParameters
 
clone() - Method in class IMU.IMUParams
 
clone() - Method in class Localiser.DelayMeasurementParams
 
clone() - Method in class Localiser.timeDelayLocalisers.LikelihoodSurfaceParams
 
clone() - Method in class Localiser.timeDelayLocalisers.MCMCParams
 
clone() - Method in class Localiser.timeDelayLocalisers.MCMCParamsHM
 
clone() - Method in class loggerForms.ItemInformation
 
clone() - Method in class Map.MapDetectionData
 
clone() - Method in class Map.MapDetectionsParameters
 
clone() - Method in class nidaqdev.NIDaqParams
 
clone() - Method in class NMEA.NMEAParameters
 
clone() - Method in class noiseMonitor.NoiseSettings
 
clone() - Method in class noiseOneBand.OneBandAlarmParameters
 
clone() - Method in class noiseOneBand.OneBandParameters
array of hearing threshold values.
clone() - Method in class PamController.PamViewParameters
 
clone() - Method in class PamController.StorageParameters
 
clone() - Method in class PamGraph3D.graphDisplay3D.BTAxis3DParams
 
clone() - Method in class pamMaths.PamQuaternion
 
clone() - Method in class pamMaths.PamVector
 
clone() - Method in class PamUtils.LatLong
 
clone() - Method in class PamView.importData.FileImportParams
 
clone() - Method in class PamView.PamSymbol
 
clone() - Method in class patchPanel.PatchPanelParameters
 
clone() - Method in class portcomms.SerialPortParameters
 
clone() - Method in class radardisplay.RadarParameters
 
clone() - Method in class rocca.RoccaParameters
 
clone() - Method in class seismicVeto.VetoParameters
 
clone() - Method in class serialPortLogger.SerialLoggerParams
 
clone() - Method in class simulatedAcquisition.SimParameters
 
clone() - Method in class smlPingerControl.SMLPingerParams
 
clone() - Method in class soundPlayback.PlaybackParameters
 
clone() - Method in class SoundRecorder.RecorderSettings
 
clone() - Method in class SoundRecorder.trigger.RecorderTriggerData
 
clone() - Method in class Spectrogram.SpectrogramParameters
 
clone() - Method in class spectrogramNoiseReduction.averageSubtraction.AverageSubtractionParameters
 
clone() - Method in class spectrogramNoiseReduction.medianFilter.MedianFilterParams
 
clone() - Method in class spectrogramNoiseReduction.SpectrogramNoiseSettings
 
clone() - Method in class spectrogramNoiseReduction.threshold.ThresholdParams
 
clone() - Method in class staticLocaliser.algorithms.MimplexParams
 
clone() - Method in class staticLocaliser.ClickControlParams
 
clone() - Method in class staticLocaliser.panels.HyperbolicLocParams
 
clone() - Method in class staticLocaliser.resultsAnalysis.BasicResultFilterParams
 
clone() - Method in class staticLocaliser.StaticLocaliserParams
 
clone() - Method in class userDisplay.UserDisplayParameters
 
clone() - Method in class videoRangePanel.LandMark
 
clone() - Method in class videoRangePanel.LandMarkGroup
 
clone() - Method in class videoRangePanel.VRCalibrationData
 
clone() - Method in class videoRangePanel.VRHeightData
 
clone() - Method in class videoRangePanel.VRMeasurement
 
clone() - Method in class videoRangePanel.VRParameters
 
clone() - Method in class whistleClassifier.WhistleClassificationParameters
 
clone() - Method in class whistlesAndMoans.alarm.WMAlarmParameters
 
clone() - Method in class whistlesAndMoans.WhistleToneParameters
 
clone() - Method in class whistlesAndMoans.WMRecorderTriggerData
 
clone() - Method in class WILDInterface.WILDParameters
 
cloneStreamer() - Method in class Array.PamArray
Clone a streamer, doing a hard clone of all hydrophones, localiser stuff, etc.
cloneStreamer(Streamer) - Method in class Array.PamArray
Clone a streamer, doing a hard clone of all hydrophones, localiser stuff, etc.
close() - Method in class generalDatabase.pamCursor.NonScrollablePamCursor
 
close() - Method in class generalDatabase.pamCursor.PamCursor
 
close() - Method in class generalDatabase.pamCursor.ScrollablePamCursor
 
close() - Method in class serialComms.SerialPortCom
 
close() - Method in class wavFiles.WavFile
 
closeAction() - Method in class PamView.PopupTextField
 
closeCard(int) - Method in class hfDaqCard.SmruDaqJNI
 
closeClickStorage() - Method in interface clickDetector.ClickFileStorage
 
closeClickStorage() - Method in class clickDetector.RainbowFile
 
closeComponent() - Method in class alarm.AlarmDisplayTable
 
closeComponent() - Method in class clipgenerator.clipDisplay.ClipDisplayPanel
 
closeComponent() - Method in class dataPlots.TDControl
 
closeComponent() - Method in class difar.display.DifarDisplayContainer
 
closeComponent() - Method in class difar.display.DifarDisplayContainer2
 
closeComponent() - Method in class Map.SimpleMap
 
closeComponent() - Method in class serialPortLogger.SerialDisplayTable
 
closeComponent() - Method in interface userDisplay.UserDisplayComponent
Called when the component is removed from the display.
closeComponent() - Method in class worldWindMap.WorldMapComponent
 
closeConnection() - Method in class clickDetector.offlineFuncs.rcImport.RainbowDatabseConverter
 
closeExtraFrame(PamGui) - Method in class PamView.GuiFrameManager
Closes a PamGui FRame (not the main one) All tabs are first moved to the main frame (No.
closeFile() - Method in class binaryFileStorage.BinaryOutputStream
 
closeLater() - Method in class PamView.PamDialog
Reschedule closing of the window to happen on the AWT thread using SwingUtilities.invokeLater(...)
closeLogFile() - Method in class Logging.LogDataObserver
 
closeLogFile() - Method in class Logging.LogToFlatFile
 
closeOutputFile() - Method in class clickDetector.ClickDetector
 
closePort() - Method in class smlPingerControl.PingerSerialPort
 
closeScrollableCursor() - Method in class generalDatabase.pamCursor.NonScrollablePamCursor
 
closeScrollableCursor() - Method in class generalDatabase.pamCursor.PamCursor
Close the scrollable cursor.
closeScrollableCursor() - Method in class generalDatabase.pamCursor.ScrollablePamCursor
 
closeSerialCom() - Method in class WILDInterface.WILDSidePanel
 
closeSerialPort() - Method in class nmeaEmulator.SerialOutput
 
closeSerialPort() - Method in class smlPingerControl.SMLPingerProcess
Close the serial port
closeShape() - Method in class PamView.zoomer.ZoomPolygon
 
closeShape() - Method in class PamView.zoomer.ZoomRectangle
 
closeShape() - Method in class PamView.zoomer.ZoomShape
Shape is complete for whatever reason.
closeStorage() - Method in class SoundRecorder.PamAudioFileStorage
 
closeStorage() - Method in interface SoundRecorder.RecorderStorage
Closes the storage (and stops recording).
closeStore() - Method in class whistleClassifier.FileTrainingStore
 
closeStore() - Method in class whistleClassifier.training.FileTrainingStore
 
closeStore() - Method in interface whistleClassifier.training.TrainingDataStore
Close store for writing
closeStore() - Method in interface whistleClassifier.TrainingDataStore
Close store for writing
closeTrainingStore() - Method in class whistleClassifier.WhistleClassifierProcess
 
closeUDPPort() - Method in class PamController.command.NetworkController
Close the UDP port.
clusterAnalaysis(ArrayList<MCMCTDResults>) - Method in class Localiser.timeDelayLocalisers.MCMC
Perform a cluster analysis of results.
clusterAnalysis - Variable in class Localiser.timeDelayLocalisers.MCMCParams
 
code - Variable in class clickDetector.ClickTypeParams
 
CODE_LENGTH - Static variable in class generalDatabase.lookupTables.LookUpTables
Maximum length of a lookup code
codeDuplicated(SweepClassifierSet, int) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifier
 
CodeHost - Interface in clickDetector.ClickClassifiers.basicSweep
Used in the sweep classifier dialog to get and set the code value from the text field.
CodeSpinnerModel - Class in clickDetector.ClickClassifiers.basicSweep
 
CodeSpinnerModel(SweepClassifier, CodeHost) - Constructor for class clickDetector.ClickClassifiers.basicSweep.CodeSpinnerModel
 
codeToListIndex(int) - Method in class clickDetector.ClickClassifiers.basic.BasicClickIdentifier
 
codeToListIndex(int) - Method in class clickDetector.ClickClassifiers.basicSweep.SweepClassifier
 
codeToListIndex(int) - Method in interface clickDetector.ClickClassifiers.ClickIdentifier
 
codeToListIndex(int) - Method in class clickDetector.ClickClassifiers.NullClassifier
 
coincides(long, long) - Method in class dataMap.OfflineDataMapPoint
Test whether or not this map point overlaps with a pair of times.
COLLECT_TRAINING_DATA - Static variable in class whistleClassifier.WhistleClassificationParameters
Collect training data.
ColorManaged - Interface in PamView
Interface that enables the colour manager (PamColors) to change the colour of any swing component.
ColorSettings - Class in PamView
 
ColorSettings() - Constructor for class PamView.ColorSettings
 
colour - Variable in class PamGraph3D.spectrogram3D.Spectrogram3DPamGraph
 
COLOUR_BY_HYDROPHONE - Static variable in class clickDetector.BTDisplayParameters
 
COLOUR_BY_SPECIES - Static variable in class clickDetector.BTDisplayParameters
 
COLOUR_BY_TRAIN - Static variable in class clickDetector.BTDisplayParameters
 
COLOUR_BY_TRAINANDSPECIES - Static variable in class clickDetector.BTDisplayParameters
 
ColourArray - Class in PamView
A series of functions for creating arrays of colours
ColourArray.ColourArrayType - Enum in PamView
 
colourByChannel - Variable in class dbht.DbHtDisplayParams
 
colourByChannel - Variable in class noiseOneBand.OneBandDisplayParams
 
ColourComboBox - Class in PamView
 
ColourComboBox() - Constructor for class PamView.ColourComboBox
 
ColourComboBox(int, int) - Constructor for class PamView.ColourComboBox
 
ColourComboBox(int, int, ColourArray.ColourArrayType[]) - Constructor for class PamView.ColourComboBox
 
colourHydrophonesByChannel - Variable in class Map.MapParameters
 
colourMap - Variable in class clickDetector.ConcatenatedSpectParams
 
colourMap - Variable in class Localiser.timeDelayLocalisers.LikelihoodSurfaceParams
 
colourNames - Static variable in class clickDetector.BTDisplayParameters
 
ColourPanel - Class in loggerForms.formdesign.propertypanels
 
ColourPanel(FormEditor, PropertyTypes) - Constructor for class loggerForms.formdesign.propertypanels.ColourPanel
 
ColourRangeSlider - Class in Spectrogram
 
ColourRangeSlider() - Constructor for class Spectrogram.ColourRangeSlider
 
ColourRangeSlider(int, int) - Constructor for class Spectrogram.ColourRangeSlider
 
ColourRangeSliderUI - Class in Spectrogram
This UI is designed to allow a user slide to thumbs defining the max and min amplitude for a colour scale.
ColourRangeSliderUI(PamRangeSlider) - Constructor for class Spectrogram.ColourRangeSliderUI
 
colourScheme - Variable in class clickDetector.BTDisplayParameters
 
columnExists(EmptyTableDefinition, PamTableItem) - Method in class generalDatabase.DBProcess
Check that a specific table column exists
columnExists(Connection, String, String, int) - Static method in class generalDatabase.TableUtilities
 
columnMarginChanged(ChangeEvent) - Method in class likelihoodDetectionModule.TreeTable
 
comboBoxList(int) - Method in class staticLocaliser.panels.UnsyncdataBlocks
 
comment - Variable in class beakedWhaleProtocol.BeakedLocationData
 
comment - Variable in class targetMotionModule.panels.TargetMotionMainPanel
 
comment - Variable in class videoRangePanel.VRMeasurement
 
COMMENT_LENGTH - Static variable in class beakedWhaleProtocol.BeakedExperimentLogging
 
COMMENT_LENGTH - Static variable in class beakedWhaleProtocol.BeakedLogging
 
COMMENT_LENGTH - Static variable in class clickDetector.offlineFuncs.OfflineEventLogging
 
COMMENT_LENGTH - Static variable in class listening.ListeningControl
 
CommPortModem - Class in portcomms
Subclasses CommPortOpen and adds send/expect handling for dealing with Hayes-type modems.
CommPortModem(String) - Constructor for class portcomms.CommPortModem
 
commPortNameToID(String) - Static method in class portcomms.PortChooser
 
commsState - Variable in class AIS.AISPositionReport
 
compare(PamDetection, PamDetection) - Method in class staticLocaliser.SLCSVLogging.SortByChannel
 
compareLists(List<TmapPoint>, List<TmapPoint>) - Method in class dataMap.OfflineDataMap
Compare two map point lists and see which of list1 are in list 2 and which of list 2 are in list 1.
compareTo(ClickAlarm) - Method in class clickDetector.ClickAlarm
 
compareTo(OfflineDataMapPoint) - Method in class dataMap.OfflineDataMapPoint
 
compareTo(FormDescription) - Method in class loggerForms.FormDescription
 
compareTo(PamSettingsGroup) - Method in class PamController.PamSettingsGroup
 
compareTo(PamDataUnit) - Method in class PamDetection.AcousticDataUnit
 
compareTo(PamDataUnit) - Method in class PamguardMVC.PamDataUnit
 
compareTo(BatchResultSet) - Method in class whistleClassifier.training.BatchResultSet
 
compareTo(WhistleShape) - Method in class whistleDetector.WhistleShape
Compare this whistle to that of another whistle
Compass - Class in Map
Draws a compass given the rotation of the map in degrees.
Compass() - Constructor for class Map.Compass
 
compassCorrection - Variable in class networkTransfer.receive.NetworkReceiveParams
 
COMPASSID - Static variable in class networkTransfer.receive.NetworkReceiver
 
COMPLETE - Static variable in class beakedWhaleProtocol.BeakedExperimentData
 
COMPLETE_ALL - Static variable in class whistleClassifier.training.ClassifierTrainingProgress
 
COMPLETE_ONE - Static variable in class whistleClassifier.training.ClassifierTrainingProgress
 
completeTask() - Method in class alarm.AlarmOfflineTask
 
completeTask() - Method in class dbht.offline.DbHtSummaryTask
 
completeTask() - Method in class noiseOneBand.offline.OneBandSummaryTask
 
completeTask() - Method in class offlineProcessing.OfflineTask
Called at the end of the thread which executes this task.
Complex - Class in fftManager
Class definition for a Complex number type.
Complex() - Constructor for class fftManager.Complex
 
Complex(double, double) - Constructor for class fftManager.Complex
Constructor
Complex(Complex) - Constructor for class fftManager.Complex
Constructor
ComplexArray - Class in fftManager
Class for handling arrays of Complex data.
ComplexArray() - Constructor for class fftManager.ComplexArray
 
complexMatrixCross(Complex[][], Complex[][]) - Static method in class PamUtils.MatrixOps
 
componentHidden(ComponentEvent) - Method in class clickDetector.ClickTabPanel
 
componentHidden(ComponentEvent) - Method in class Layout.PamInternalFrame
 
componentHidden(ComponentEvent) - Method in class PamView.PamObjectViewer
 
componentMoved(ComponentEvent) - Method in class clickDetector.ClickTabPanel
 
componentMoved(ComponentEvent) - Method in class Layout.PamInternalFrame
 
componentMoved(ComponentEvent) - Method in class PamView.PamObjectViewer
 
componentResized(ComponentEvent) - Method in class clickDetector.ClickTabPanel
 
componentResized(ComponentEvent) - Method in class Layout.PamInternalFrame
 
componentResized(ComponentEvent) - Method in class PamView.PamObjectViewer
 
componentShown(ComponentEvent) - Method in class clickDetector.ClickTabPanel
 
componentShown(ComponentEvent) - Method in class Layout.PamInternalFrame
 
componentShown(ComponentEvent) - Method in class PamView.PamObjectViewer
 
CompoundHidingDialog - Class in dataPlots.layout
A hiding dialog panel for use with multiple display overlays.
CompoundHidingDialog(TDGraph) - Constructor for class dataPlots.layout.CompoundHidingDialog
 
CompoundHidingTabPane - Class in dataPlots.layout
A tabbedhidingpane which includes a settings button on the tab.
CompoundHidingTabPane() - Constructor for class dataPlots.layout.CompoundHidingTabPane
 
compress(Point3d[], Color3b[]) - Method in class PamGraph3D.spectrogram3D.Surface3D
Use this function to reduce the number of polygons by around half for large wire frame 3D spectrograms.
compressMCMCResults(ArrayList<ArrayList<Point3f>>, int) - Static method in class Localiser.timeDelayLocalisers.MCMC
Reduces the number of MCMC jumps in order to reduce memory usage when displaying probability distributions in Java3D or other visualise components.
ConcatenatedSpectParams - Class in clickDetector
 
ConcatenatedSpectParams() - Constructor for class clickDetector.ConcatenatedSpectParams
 
ConcatenatedSpectrogram - Class in clickDetector
 
ConcatenatedSpectrogram(ClickControl, ClickDisplayManager, ClickDisplayManager.ClickDisplayInfo) - Constructor for class clickDetector.ConcatenatedSpectrogram
 
ConcatenatedSpectrogram.MouseDragged - Class in clickDetector
Sets the plot axis every time the mouse is dragged.
ConcatenatedSpectrogram.MouseShowInfo - Class in clickDetector
Show freuency and click Info
ConcatenatedSpectrogram.MouseShowInfo() - Constructor for class clickDetector.ConcatenatedSpectrogram.MouseShowInfo
 
ConcatenatedSpectrogram.MouseWheelMoved - Class in clickDetector
Sets the plot axis every time the mouse wheel is moved.
ConcatenatedSpectrogram.MShowPopUpMenu - Class in clickDetector
Show pop up menu
ConcatenatedSpectrogram.MShowPopUpMenu() - Constructor for class clickDetector.ConcatenatedSpectrogram.MShowPopUpMenu
 
ConcatenatedSpectrogramdialog - Class in clickDetector
 
condenseInfo() - Method in class whistlesAndMoans.ConnectedRegion
Go through the data and remove create triplets of into about each part of each slice in the region.
configDemux(DifarParameters, double) - Method in class difar.demux.AmmcDemux
 
configDemux(DifarParameters, double) - Method in class difar.demux.DifarDemux
 
configDemux(DifarParameters, double) - Method in class difar.demux.NativeDemux
 
ConfigurationDialogSettings - Class in likelihoodDetectionModule
The Class ConfigurationDialogSettings holds parameters about the configuration dialog box that are persistent from one invocation to the next.
ConfigurationDialogSettings() - Constructor for class likelihoodDetectionModule.ConfigurationDialogSettings
 
configurationsWithErrors() - Method in class likelihoodDetectionModule.LikelihoodDetectionParameters
Configurations with errors returns the names of all of the TargetConfigurations that are currenly indicating errors.
configure() - Method in class videoRangePanel.RoundEarthMethod
 
configureGraphMenu(int) - Method in class dataPlots.HidingControlPanel
 
configureSensor(Frame) - Method in interface depthReadout.DepthSystem
Configure one of the sensors.
configureSensor(Frame) - Method in class depthReadout.MccDepthSystem
 
configureSummary(int) - Method in class patchPanel.PatchPanelParameters
 
conj() - Method in class fftManager.Complex
 
conj(Complex) - Static method in class fftManager.Complex
Converts a number to it's own complex conjugate
connect(String, int, int) - Method in class portcomms.SerialPortParameters
 
ConnectedRegion - Class in whistlesAndMoans
 
ConnectedRegion(int, int, int, int) - Constructor for class whistlesAndMoans.ConnectedRegion
Constructor used during initial region detection process.
ConnectedRegion(ConnectedRegion, SliceData, int, int) - Constructor for class whistlesAndMoans.ConnectedRegion
Constructor to create a new connected region during fragmentation.
ConnectedRegionDataBlock - Class in whistlesAndMoans
 
ConnectedRegionDataBlock(String, WhistleMoanControl, WhistleToneConnectProcess, int) - Constructor for class whistlesAndMoans.ConnectedRegionDataBlock
 
ConnectedRegionDataUnit - Class in whistlesAndMoans
 
ConnectedRegionDataUnit(ConnectedRegion, WhistleToneConnectProcess) - Constructor for class whistlesAndMoans.ConnectedRegionDataUnit
 
constrainedAngle(double) - Static method in class PamUtils.PamUtils
Force an angle to sit 0<= angle < 360.
constrainedAngle(double, double) - Static method in class PamUtils.PamUtils
Force an angle to sit within some range.
constrainedAngleR(double, double) - Static method in class PamUtils.PamUtils
Force an angle to sit within some range.
consume(double[]) - Method in class likelihoodDetectionModule.normalizer.SlidingAverager
 
Consumer - Class in ipcomms
 
Consumer() - Constructor for class ipcomms.Consumer
 
ConsumerTester - Class in ipcomms
 
ConsumerTester() - Constructor for class ipcomms.ConsumerTester
 
containerNotification(DisplayPanelContainer, int) - Method in class fftManager.FFTPluginPanelProvider.FFTPluginPanel
 
containerNotification(DisplayPanelContainer, int) - Method in class ipiDemo.IpiPluginPanelProvider.IpiPluginPanel
 
containerNotification(DisplayPanelContainer, int) - Method in class Layout.DisplayPanel
Called by the DisplayPanelContainer whenever the scales change - e.g.
containerNotification(DisplayPanelContainer, int) - Method in class PamguardMVC.RawDataDisplay.RawDisplayPanel
Not used - all timing is controlled by the arrival of new data blocks.
containerNotification(DisplayPanelContainer, int) - Method in class seismicVeto.VetoPluginPanelProvider.VetoPluginPanel
 
containerNotification(DisplayPanelContainer, int) - Method in class WorkshopDemo.WorkshopPluginPanelProvider.WorkshopPluginPanel
 
containsChannel(int[], int) - Static method in class PamDetection.AbstractDetectionMatch
Simple functions which return true if the array channels contains the int channel.
containsChild(BranchGroup, BranchGroup) - Static method in class PamGraph3D.Pam3DUtils
Determines whether a child is within a BranchGroup
containsPoint(Component, Point) - Method in class PamView.zoomer.ZoomPolygon
 
containsPoint(Component, Point) - Method in class PamView.zoomer.ZoomRectangle
 
containsPoint(Component, Point) - Method in class PamView.zoomer.ZoomShape
Shape contains the point pt.
continueEvent(long, PamDataUnit) - Method in interface eventCounter.EventCounterMonitor
 
CONTOUROFF - Static variable in class rocca.RoccaSpecPopUp
constant indicating the contour should be turned off
CONTOURON - Static variable in class rocca.RoccaSpecPopUp
constant indicating the contour should be turned on
CONTROL_PANEL_PAUSED - Static variable in class staticLocaliser.StaticLocaliserControl
The control panel has been paused or un-paused: This is only used in real time operation
ControlDescription - Class in loggerForms.controlDescriptions
 
ControlEditor - Class in loggerForms.formdesign
Main editor for a particular control.
controlEnergyBand - Variable in class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
 
controlPanelDimensions - Static variable in class staticLocaliser.panels.StaticLocalisationMainPanel
 
ControlPropertySheet - Class in loggerForms.formdesign
Sheet of control properties for a particular control title.
ControlPropertySheet(FormEditor, ControlTitle) - Constructor for class loggerForms.formdesign.ControlPropertySheet
 
controls() - Method in class clickDetector.ClickSpectrumTemplateEditDialog
 
ControlTitle - Class in loggerForms.formdesign
Title panel for the control editor.
ControlTitle(FormEditDialog, ItemInformation) - Constructor for class loggerForms.formdesign.ControlTitle
 
ControlTypes - Enum in loggerForms.controlDescriptions
 
conv(double[], double[]) - Static method in class simulatedAcquisition.PistonModel
Convolve the impulse response with the wave.
converse() - Method in class portcomms.PortOwner
 
ConversionProgress - Class in clickDetector.offlineFuncs.rcImport
 
ConversionProgress(int, int, int, int, int, File) - Constructor for class clickDetector.offlineFuncs.rcImport.ConversionProgress
 
convert628(char) - Static method in class NMEA.NMEABitArray
converts a character from an AIS data string into a six bit integer value packed into an 8 bit byte.
convert826(int) - Static method in class NMEA.NMEABitArray
Convert a six bit integer value to AIS / NMEA character data
convertedFiles - Variable in class clickDetector.offlineFuncs.rcImport.ConversionProgress
 
convertTemplate(ClickTemplate, boolean) - Method in class clickDetector.ClickSpectrum
This function converts a ClickTemplate to an fft which corresponds to the correct samplerate used in the current click data.
convertto3d(Point3f) - Static method in class PamGraph3D.Pam3DUtils
Convert a Point3f to a Point3d.
convertto3f(Point3d) - Static method in class PamGraph3D.Pam3DUtils
Convert a Point3d to a Point3f.
convertToArrayList(double[]) - Static method in class clickDetector.ClickSpectrumTemplateEditDialog
 
convertToDoubleArray(ArrayList<Double>) - Static method in class clickDetector.ClickSpectrumTemplateEditDialog
Converts and ArrayList to a double[]
convertToHydrophoneList(ArrayList<ArrayList<Double>>) - Method in class Array.importHydrophoneData.HydrophoneImport
Converts a 2D List of hydrophones into a 1D list of hydrophones.
converttoLocFormat(ArrayList<ArrayList<TDArrayList<Double>>>) - Static method in class staticLocaliser.TDManager
Converts an ArrayList of time delays or time delay errors into the correct format for localisers.
convertToPoint3d(ArrayList<Point3f>) - Static method in class PamGraph3D.Pam3DUtils
Convert a point3d array to a point3f array.
convertToPoint3f(ArrayList<Point3d>) - Static method in class PamGraph3D.Pam3DUtils
Convert a point3d array to a point3f array.
convertToTideDataPOLPRED(ArrayList<String>, LatLong) - Static method in class videoRangePanel.importTideData.TideManager
Convert string data from a POLPRED output file.
converttoxyMeters(Point3d, double, double, double) - Method in class PamGraph3D.MouseGetVirtualLocation
Converts virtual world points to real meters.
converttoxyMeters(Point3d, double, double) - Method in class targetMotionOld.dialog.DialogMap3D
Converts virtual world Co-Ordinates to real meters.
conWorkDone() - Method in class clickDetector.offlineFuncs.rcImport.RainbowDatabaseConversion
 
conWorkWorker(RainbowDatabaseConversion.ConvertWorker) - Method in class clickDetector.offlineFuncs.rcImport.RainbowDatabaseConversion
Called back from swing worker thread.
Coordinate3d - Class in PamUtils
Class definition for a x,y coordinate number type.
Coordinate3d() - Constructor for class PamUtils.Coordinate3d
 
Coordinate3d(double, double) - Constructor for class PamUtils.Coordinate3d
 
Coordinate3d(double, double, double) - Constructor for class PamUtils.Coordinate3d
 
Coordinate3d(Coordinate3d) - Constructor for class PamUtils.Coordinate3d
 
Coordinate3d2XyArrays(int[], int[], Coordinate3d[]) - Static method in class Map.TransformUtilities
 
CoordsXY - Class in Map
Class definition for a x,y coordinate number type.
CoordsXY() - Constructor for class Map.CoordsXY
 
CoordsXY(double, double) - Constructor for class Map.CoordsXY
 
CoordsXY(CoordsXY) - Constructor for class Map.CoordsXY
 
CoordUtils - Class in PamUtils
 
CoordUtils() - Constructor for class PamUtils.CoordUtils
 
copyMouseMapPositionToClipboard(double, double) - Method in class Map.GpsTextDisplay
 
copyToClipBoard() - Method in class PamView.ClipboardCopier
Copy an image of the component to the clip board
CornerLayout - Class in PamView
 
CornerLayout(CornerLayoutContraint) - Constructor for class PamView.CornerLayout
 
CornerLayoutContraint - Class in PamView
 
CornerLayoutContraint() - Constructor for class PamView.CornerLayoutContraint
 
correlate(double[], double[]) - Method in class clickDetector.ClickSpectrum
Take two double arrays, not necessarily the same frequency or same number of bins and correlate;
Correlations - Class in Localiser
 
Correlations() - Constructor for class Localiser.Correlations
 
COUNT_LEVELS - Static variable in class alarm.AlarmParameters
 
COUNT_SCORES - Static variable in class alarm.AlarmParameters
 
COUNT_SIMPLE - Static variable in class alarm.AlarmParameters
 
COUNT_SINGLES - Static variable in class alarm.AlarmParameters
 
countChannelGroups(int, int[]) - Static method in class PamView.GroupedSourcePanel
 
countChannelGroups() - Method in class PamView.GroupedSourceParameters
Get the total number of channel groups
countDisplays(Class) - Method in class clickDetector.ClickDisplayManager
 
CounterControl - Class in loggerForms.controls
 
CounterControl(ControlDescription, LoggerForm) - Constructor for class loggerForms.controls.CounterControl
 
CounterPropertySet - Class in loggerForms.formdesign.controlpropsets
 
CounterPropertySet(FormDescription, ControlTitle) - Constructor for class loggerForms.formdesign.controlpropsets.CounterPropertySet
 
countEverything(ClickDisplayManager) - Method in class clickDetector.ClickDisplayManagerParameters2
 
countingState - Variable in class Acquisition.offlineFuncs.FileMapProgress
 
countIntervalMillis - Variable in class alarm.AlarmParameters
 
countObservers() - Method in class PamguardMVC.PamObservable
 
countType - Variable in class alarm.AlarmParameters
 
countWhistles() - Method in class rocca.RoccaSightingDataUnit
 
coupledScrollerChanged(AbstractPamScroller) - Method in class pamScrollSystem.AbstractPamScroller
Called when a scroller which is coupled to this scroller changes in any way.
coupleScroller(String) - Method in class pamScrollSystem.AbstractPamScroller
Couple this scroller to another scroller so that both have exactly the same behaviour, load the same data period, move their scrolls together, etc.
coupleScroller(AbstractPamScroller, String) - Method in class pamScrollSystem.AbstractScrollManager
Couple a scroller to another scroller so that both have exactly the same behaviour, load the same data period, move their scrolls together, etc.
course - Variable in class simulatedAcquisition.SimObject
Course over ground in degrees (true)
courseInterval - Variable in class GPS.GPSParameters
Minimum course change for a dynamic read
courseOverGround - Variable in class AIS.AISPositionReport
 
cpod - package cpod
 
cpod.tdPlots - package cpod.tdPlots
 
CPODClick - Class in cpod
 
CPODClick(long, long, short, short, short, short, short, short, short[]) - Constructor for class cpod.CPODClick
 
CPODClickDataBlock - Class in cpod
 
CPODClickDataBlock(String, PamProcess, int) - Constructor for class cpod.CPODClickDataBlock
 
CPODControl - Class in cpod
 
CPODControl(String) - Constructor for class cpod.CPODControl
 
CPODDataGram - Class in cpod
 
CPODDataGram(int) - Constructor for class cpod.CPODDataGram
 
CPODDataGramProvider - Class in cpod
 
CPODDataGramProvider(CPODControl) - Constructor for class cpod.CPODDataGramProvider
 
CPODDataMapPoint - Class in cpod
 
CPODDataMapPoint(long, long, int, File, long) - Constructor for class cpod.CPODDataMapPoint
 
CPODDialog - Class in cpod
 
CPODLoader - Class in cpod
Funcions to handle loading of CPOD data.
CPODLoader(CPODControl) - Constructor for class cpod.CPODLoader
 
CPODMap - Class in cpod
 
CPODMap(CPODControl, File, int) - Constructor for class cpod.CPODMap
 
CPODParams - Class in cpod
 
CPODParams(OfflineFileParams) - Constructor for class cpod.CPODParams
 
CPODPlotinfo - Class in cpod.tdPlots
 
CPODPlotinfo(CPODControl, TDDataProvider, TDGraph, PamDataBlock) - Constructor for class cpod.tdPlots.CPODPlotinfo
 
CPODPlotProvider - Class in cpod.tdPlots
 
CPODPlotProvider(CPODControl, CPODClickDataBlock) - Constructor for class cpod.tdPlots.CPODPlotProvider
 
CPODSymbolChooser - Class in cpod.tdPlots
 
CPODSymbolChooser(CPODPlotinfo) - Constructor for class cpod.tdPlots.CPODSymbolChooser
 
CPUFFTTest - Class in performanceTests
 
CPUFFTTest() - Constructor for class performanceTests.CPUFFTTest
 
create(int) - Static method in class PamController.PamController
 
create(String) - Method in class PamModel.PamModuleInfo
 
create3DCross(float, float, float, Appearance) - Static method in class PamGraph3D.PamShapes3D
Creates a 3D cross, with each axis of the cross the size specified by x, y and z.
create3DMap() - Method in class staticLocaliser.panels.StaticLocalisationMainPanel
 
createAISMenu(Frame) - Method in class AIS.AISControl
 
createAlgorithmPanel() - Method in class staticLocaliser.panels.StaticLocalisationMainPanel
 
createAllImages() - Method in class Spectrogram.SpectrogramDisplay
Called whenever the display size changes so that buffered images can be recreated.
createAndCheckTable() - Method in class noiseMonitor.NoiseLogging
Called from the noise monitor process to recreate the table definition based on the noise measurements created by the user and then check the table columns in the database
createAnnotations(boolean) - Method in class PamguardMVC.PamProcess
 
createArray(T, Appearance) - Method in class targetMotionModule.panels.MapPanel3D
 
createArray(T, Appearance) - Method in class targetMotionOld.dialog.DialogMap3D
 
createArrayandSea() - Method in class staticLocaliser.panels.MapPanel3DSL
 
createArrayData() - Method in class Array.HydrophoneProcess
Save all the array data to the database.
createAxis(float, float, float, float, String, String, String, Color3f) - Static method in class PamGraph3D.PamShapes3D
Creates a set of labelled axis showing each 3D dimension.
createAxis(float, float, float, String, String, String, Color3f) - Method in class staticLocaliser.panels.LocalisationResultsGraph
Create axis, there are 4 variables, x,y,z, and time
createAxisVisualisation(String, String, String) - Method in class PamGraph3D.AxisVisualisation
Add a small icon to show the orientatio of the graph
createBasicMenu(PamModelInterface, ActionListener) - Static method in class PamView.PamMenu
 
createBearingLocaliser(int, double) - Static method in class Localiser.bearingLocaliser.BearingLocaliserSelector
 
createBinaryWriteObject() - Method in class binaryFileStorage.ModuleNameObject
 
createBlackToWhiteArray(int) - Static method in class PamView.ColourArray
 
createByteConverter(int, boolean, AudioFormat.Encoding) - Static method in class wavFiles.ByteConverter
Create a byte converter based on the number of bytes per sample and on the endianness of the byte data.
createByteConverter(AudioFormat) - Static method in class wavFiles.ByteConverter
 
createCalibrationList() - Method in class videoRangePanel.vrmethods.AbstractVRMethod
Creates a panel containing the calibration combo box and labels.
createChannelBuffers() - Method in class asiojni.AsioJniInterface
 
createClassCountList() - Method in class rocca.RoccaSightingDataUnit
Create a single string containing the species class counts, using the '-' character separating the values
createClassifier(int) - Static method in class classifier.ClassifierTypes
 
createClassifier(int) - Static method in class whistleClassifier.ClassifierTypes
 
createClickList() - Method in class clickDetector.tdPlots.ClickHidingDialog
 
createComboDataList(boolean) - Method in class staticLocaliser.panels.StaticLocalisationMainPanel
Creates the combo box which contains the data blocks which can be localised.
createCommentPanel() - Method in class targetMotionModule.panels.TargetMotionMainPanel
 
createComplexArray(double[]) - Static method in class fftManager.Complex
Create a complex array from a double array
createContourStatsHeader() - Method in class rocca.RoccaContourDataBlock
Creates the header line for the contour status summary file.
createContourStatsString() - Method in class rocca.RoccaContourDataBlock
Method to create a string containing the current contour statistics.
createContourStatsString(String, int) - Method in class rocca.RoccaContourDataBlock
Method to create a string containing the current contour statistics.
createContourStatsString(String, int, String) - Method in class rocca.RoccaContourDataBlock
Method to create a string containing the current contour statistics.
createControlPropertySet(FormDescription, ControlTitle) - Static method in class loggerForms.formdesign.ControlEditor
 
createCursor(EmptyTableDefinition) - Static method in class generalDatabase.pamCursor.PamCursorManager
Create a cursor using the connection to the main database
createCursor(Connection, EmptyTableDefinition) - Static method in class generalDatabase.pamCursor.PamCursorManager
Create a cursor using any connection to a database.
created() - Method in class clickDetector.ClickBTDisplay
 
created() - Method in class clickDetector.ClickDisplay
 
createDataFromXML(Document) - Method in class loggerForms.FormDescription
 
createDataGraphs() - Method in class dataMap.DataMapPanel
Create a new set of data graphs to go into the panel.
createDataGraphs() - Method in class dataMap.ScrollingDataPanel
Create the data graphs to go into the panel.
createDataInfo(TDGraph) - Method in class clickDetector.tdPlots.ClickPlotProvider
 
createDataInfo(TDGraph) - Method in class cpod.tdPlots.CPODPlotProvider
 
createDataInfo(TDGraph) - Method in class d3.plots.D3DataPlotProvider
 
createDataInfo(TDGraph) - Method in class dataPlots.data.TDDataProvider
 
createDataInfo(TDGraph) - Method in class decimus.summarystring.DStrPlotProvider
 
createDataInfo(TDGraph) - Method in class difar.plots.DifarBearingPlotProvider
 
createDataInfo(TDGraph) - Method in class difar.plots.DifarIntensityPlotProvider
 
createDataInfo(TDGraph) - Method in class fftManager.newSpectrogram.SpectrogramPlotProvider
 
createDataInfo(TDGraph) - Method in class whistlesAndMoans.plots.WhistlePlotProvider
 
createDataList() - Method in class dataPlots.layout.CompoundHidingDialog
 
createDataSelector(String, boolean) - Method in class clickDetector.dataSelector.ClickDataSelectCreator
 
createDataSelector(String, boolean) - Method in class difar.dataSelector.DifarDataSelectCreator
 
createDataSelector(String, boolean) - Method in class PamguardMVC.dataSelector.DataSelectorCreator
Create a data selector with a given name.
createDataSelector(String, boolean) - Method in class whistlesAndMoans.dataSelector.WMDDataSelectCreator
 
createDataUnit(ArrayList<Double>) - Method in class Array.importHydrophoneData.HydrophoneImport
For hydrophone data imported [0]=timeMilliss [1]=x [2]=y [3]=z [4]=xErr [5]=yErr [6]=zErr [7]=streamerId [8]=hydrophoneId [9]=sensitivity [10]=gain
createDataUnit(ArrayList<Double>) - Method in class Array.importHydrophoneData.StreamerImport
 
createDataUnit(ArrayList<Double>) - Method in class IMU.IMUImport
Create a data unit from input Array:
createDataUnit(long) - Method in interface PamguardMVC.DataCreator
 
createDataUnit(T) - Method in class PamView.importData.DataImport
Create a data unit from the data loaded from the imported file.
createDBColumnName(int, int) - Method in class noiseMonitor.NoiseControl
 
createDBColumnName(int, int) - Method in class noiseMonitor.NoiseDataBlock
 
createDefaultHydrophoneUnits(long) - Method in class Array.HydrophoneProcess
 
createDefaultStreamerUnits(long) - Method in class Array.HydrophoneProcess
 
createDetectionMatchString(SLResult) - Static method in class staticLocaliser.SLCSVLogging
Create a string which references which detection were used to create the localisation result.
createDetectionMenu(Frame) - Method in class Acquisition.AcquisitionControl
 
createDetectionMenu(Frame) - Method in class AIS.AISControl
 
createDetectionMenu(Frame) - Method in class alarm.AlarmControl
 
createDetectionMenu(Frame) - Method in class amplifier.AmpControl
 
createDetectionMenu(Frame) - Method in class angleMeasurement.AngleControl
 
createDetectionMenu(Frame) - Method in class ArrayAccelerometer.ArrayAccelControl
 
createDetectionMenu(Frame) - Method in class beakedWhaleProtocol.BeakedControl
 
createDetectionMenu(Frame) - Method in class clickDetector.ClickControl
 
createDetectionMenu(Frame) - Method in class clipgenerator.ClipControl
 
createDetectionMenu(Frame) - Method in class dbht.DbHtControl
 
createDetectionMenu(Frame) - Method in class decimator.DecimatorControl
 
createDetectionMenu(Frame) - Method in class depthReadout.DepthControl
 
createDetectionMenu(Frame) - Method in class difar.DifarControl
 
createDetectionMenu(Frame) - Method in class echoDetector.EchoController
 
createDetectionMenu(Frame) - Method in class EdgeDetector.EdgeControl
 
createDetectionMenu(Frame) - Method in class envelopeTracer.EnvelopeControl
 
createDetectionMenu(Frame) - Method in class fftManager.PamFFTControl
 
createDetectionMenu(Frame) - Method in class fileOfflineData.OfflineFileControl
 
createDetectionMenu(Frame) - Method in class Filters.FilterControl
 
createDetectionMenu(Frame) - Method in class GPS.GPSControl
 
createDetectionMenu(Frame) - Method in class IMU.IMUControl
 
createDetectionMenu(Frame) - Method in class ipiDemo.IpiController
 
createDetectionMenu(Frame) - Method in class IshmaelDetector.EnergySumControl
 
createDetectionMenu(Frame, String) - Method in class IshmaelDetector.IshDetControl
 
createDetectionMenu(Frame) - Method in class IshmaelDetector.MatchFiltControl
 
createDetectionMenu(Frame) - Method in class IshmaelDetector.SgramCorrControl
 
createDetectionMenu(Frame) - Method in class IshmaelLocator.IshLocControl
 
createDetectionMenu(Frame) - Method in class KernelSmoothing.KernelSmoothingControl
 
createDetectionMenu(Frame) - Method in class levelMeter.LevelMeterControl
 
createDetectionMenu(Frame) - Method in class likelihoodDetectionModule.LikelihoodDetectionUnit
 
createDetectionMenu(Frame) - Method in class listening.ListeningControl
 
createDetectionMenu(Frame) - Method in class loc3d_Thode.TowedArray3DController
 
createDetectionMenu(Frame) - Method in class loggerForms.FormsControl
 
createDetectionMenu(Frame) - Method in class ltsa.LtsaControl
 
createDetectionMenu(Frame) - Method in class networkTransfer.receive.NetworkReceiver
 
createDetectionMenu(Frame) - Method in class networkTransfer.send.NetworkSender
 
createDetectionMenu(Frame) - Method in class NMEA.NMEAControl
 
createDetectionMenu(Frame) - Method in class noiseBandMonitor.NoiseBandControl
 
createDetectionMenu(Frame) - Method in class noiseMonitor.NoiseControl
 
createDetectionMenu(Frame) - Method in class noiseOneBand.OneBandControl
 
createDetectionMenu(Frame) - Method in class PamController.PamControlledUnit
Create a JMenu object containing MenuItems associated with PamProcesses
createDetectionMenu(Frame) - Method in class patchPanel.PatchPanelControl
 
createDetectionMenu(Frame) - Method in class RightWhaleEdgeDetector.RWEControl
 
createDetectionMenu(Frame) - Method in class rocca.RoccaControl
 
createDetectionMenu(Frame) - Method in class seismicVeto.VetoController
 
createDetectionMenu(Frame) - Method in class serialPortLogger.SerialLogger
 
createDetectionMenu(Frame) - Method in class smlGainControl.SMLGainControl
 
createDetectionMenu(Frame) - Method in class smlPingerControl.SMLPingerControl
 
createDetectionMenu(Frame) - Method in class soundPlayback.PlaybackControl
 
createDetectionMenu(Frame) - Method in class SoundRecorder.RecorderControl
 
createDetectionMenu(Frame) - Method in class spectrogramNoiseReduction.SpectrogramNoiseControl
 
createDetectionMenu() - Method in class staticLocaliser.StaticLocaliserControl
Creates a static localiser specific JMenu.
createDetectionMenu(Frame) - Method in class whistleClassifier.WhistleClassifierControl
 
createDetectionMenu(Frame) - Method in class whistleDetector.WhistleControl
 
createDetectionMenu(Frame) - Method in class whistlesAndMoans.WhistleMoanControl
 
createDetectionMenu(Frame) - Method in class WILDInterface.WILDControl
Add WILDParameters to the Detection menu
createDetectionMenu(Frame) - Method in class WorkshopDemo.WorkshopController
 
createDetectionStatsHeader() - Method in class rocca.RoccaSidePanel.SidePanel
Creates a string containing the header information for the detection stats file serialVersionUID=15 2014/11/12 add time parameters to header
createDetectionStatsString(RoccaSightingDataUnit) - Method in class rocca.RoccaSidePanel.SidePanel
Creates a string containing the data for the passed detection.
createDisplayMenu(Frame) - Method in class AirgunDisplay.AirgunControl
 
createDisplayMenu(Frame) - Method in class AIS.AISControl
 
createDisplayMenu(Frame) - Method in class clickDetector.ClickControl
 
createDisplayMenu(Frame) - Method in class clipgenerator.ClipControl
 
createDisplayMenu(Frame) - Method in class dbht.DbHtControl
 
createDisplayMenu(Frame) - Method in class dbht.DbHtTabPanel
 
createDisplayMenu(Frame) - Method in class difar.DifarControl
 
createDisplayMenu(Frame) - Method in class landMarks.LandmarkControl
 
createDisplayMenu(Frame) - Method in class loc3d_Thode.TowedArray3DController
This next function sets up a menu which wil be added to the main Display menu
createDisplayMenu(Frame) - Method in class loggerForms.FormsControl
 
createDisplayMenu(Frame) - Method in class Map.SimpleMap
 
createDisplayMenu(Frame) - Method in class noiseMonitor.NoiseControl
 
createDisplayMenu(Frame) - Method in class noiseOneBand.OneBandControl
 
createDisplayMenu(Frame) - Method in class noiseOneBand.OneBandTabPanel
 
createDisplayMenu(Frame) - Method in class PamController.PamControlledUnit
Create a JMenu object containing MenuItems associated with the view
createDisplayMenu(Frame) - Method in class userDisplay.UserDisplayControl
 
createDisplayMenu(Frame) - Method in class whistlesAndMoans.WhistleMoanControl
 
createDisplayMenu(Frame) - Method in class WorkshopDemo.WorkshopController
This next function sets up a menu which wil be added to the main Display menu
createDisplayPanel(DisplayPanelContainer) - Method in class clickDetector.ClickSpectrogramPlugin
 
createDisplayPanel(DisplayPanelContainer) - Method in class clickDetector.TriggerFunctionDisplay
 
createDisplayPanel(DisplayPanelContainer) - Method in class fftManager.FFTPluginPanelProvider
 
createDisplayPanel(DisplayPanelContainer) - Method in class ipiDemo.IpiPluginPanelProvider
 
createDisplayPanel(DisplayPanelContainer) - Method in class IshmaelDetector.IshDetGraphics
 
createDisplayPanel(DisplayPanelContainer) - Method in class IshmaelLocator.IshLocGraphics
 
createDisplayPanel(DisplayPanelContainer) - Method in interface Layout.DisplayPanelProvider
 
createDisplayPanel(DisplayPanelContainer) - Method in class PamguardMVC.RawDataDisplay
Implementation of abstract method to create a new DisplayPanel.
createDisplayPanel(DisplayPanelContainer) - Method in class seismicVeto.VetoPluginPanelProvider
 
createDisplayPanel(DisplayPanelContainer) - Method in class WorkshopDemo.WorkshopPluginPanelProvider
 
createDisplays() - Method in class clickDetector.ClickDisplayManager
 
createEastPanel() - Method in class staticLocaliser.panels.StaticLocalisationMainPanel
Create the east panel which contains the tdVisualisation panel and panels showing unique info from each localisation algorithm.
createEchoDetector(ClickDetector.ChannelGroupDetector, int) - Method in class clickDetector.echoDetection.EchoDetectionSystem
Get an echo detection object for a set of channels.
createEchoDetector(ClickDetector.ChannelGroupDetector, int) - Method in class clickDetector.echoDetection.JamieEchoDetectionSystem
 
createEchoDetector(ClickDetector.ChannelGroupDetector, int) - Method in class clickDetector.echoDetection.SimpleEchoDetectionSystem
 
createFFTProcess(LikelihoodFFTParameters) - Method in class likelihoodDetectionModule.LikelihoodFFTController
Request the controller to crete a new fft process based on the specified parameters.
createFileMenu(JFrame) - Method in class binaryFileStorage.BinaryStore
 
createFileMenu(JFrame) - Method in class generalDatabase.DBControl
 
createFileMenu(JFrame) - Method in class PamController.PamControlledUnit
 
createFileName(long, String, String, String) - Static method in class PamUtils.PamCalendar
Create a file name based on a time and other information
createFileName(String, String, String) - Static method in class PamUtils.PamCalendar
Create a file name that doesn't contain a time
createFileName(long, String, String) - Static method in class PamUtils.PamCalendar
Creates a file name containing the time and a user defined prefix and file end
createFileNameMillis(long, String, String, String) - Static method in class PamUtils.PamCalendar
Create a file name based on a time and other information
createFileNameMillis(long, String, String) - Static method in class PamUtils.PamCalendar
Like createFileName but the time now also includes milliseconds.
createFilter(int) - Method in class Filters.FilterMethod
 
createFilter(int) - Method in class Filters.FIRFilterMethod
 
createFilter(int) - Method in class Filters.IIRFilterMethod
 
createFilter(int) - Method in class Filters.NullMethod
 
createFilterMethod(double, FilterParams) - Static method in class Filters.FilterMethod
Create a filter method based on the type in the parameters.
createFilters() - Method in class clickDetector.ClickDetector
 
createFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class binaryFileStorage.ModuleFooter
Read data from a byte array to recreate a module header being read back from file.
createFooter(BinaryObjectData, BinaryHeader, ModuleHeader) - Method in class clickDetector.ClickBinaryModuleFooter
 
createForm() - Method in class loggerForms.FormDescription
 
createForms() - Method in class loggerForms.FormsTabPanel
 
createFragments() - Method in class whistlesAndMoans.FragmentingFragmenter
Split the mother region up into fragments, breaking at every branch and join
createFrameAndWindows() - Method in class PamView.PamHelp
Adds the right components to the main frame.
createFromByteArray(byte[]) - Static method in class PamController.PamControlledUnitSettings
Create an object from a serialised byte array
createFromNamedByteArray(byte[]) - Static method in class PamController.PamControlledUnitSettings
 
createGPSMenu(Frame) - Method in class GPS.GPSControl
 
createGraphComponents() - Method in class PamGraph3D.spectrogram3D.Spectrogram3DPamGraph
Create the 3D graph axis.
createGui() - Method in class Localiser.timeDelayLocalisers.MCMCmodels.Vert3D
 
createHeader(BinaryObjectData, BinaryHeader) - Method in class binaryFileStorage.ModuleHeader
Read data from a byte array to recreate a module header being read back from file.
createHeader(BinaryObjectData, BinaryHeader) - Method in class clickDetector.ClickBinaryModuleHeader
 
createHeader(BinaryObjectData, BinaryHeader) - Method in class ltsa.LtsaModuleHeader
 
createHeader() - Static method in class staticLocaliser.DetectionNCSVLogging
 
createHeader(BinaryObjectData, BinaryHeader) - Method in class whistlesAndMoans.WhistleBinaryModuleHeader
 
createHelpMenu(Frame) - Method in class PamController.PamControlledUnit
 
createHelpSet() - Method in class PamView.PamHelp
Create the master HelpSet object from the help/PAMGUARD.hs file.
createHidingTab(String, Icon) - Method in class PamView.hidingpanel.TabbedHidingPane
Create the hiding tab for a panel.
createHistograms() - Method in class clickDetector.BTAmplitudeSelector
 
createHotArray(int) - Static method in class PamView.ColourArray
 
createHydrophoneArray(ArrayList<Point3d>) - Static method in class PamGraph3D.PamShapes3D
 
createImage(double[][], ColourArray, boolean, double) - Static method in class PamUtils.MatrixOps
 
createInClause(int[]) - Method in class generalDatabase.SQLLogging
Make an SQL clause in the from IN ( ...
createIndexFile() - Method in class binaryFileStorage.BinaryOutputStream
 
createIndexFile(File) - Method in class binaryFileStorage.BinaryOutputStream
 
createInnerBorder() - Static method in class PamView.PamBorder
Create a standard bevel for all inner plot windows in PAMGuard This is currently a lowered bevel border, but as this goes out of fashion, we may change it to something planer.
createKeyItem(GeneralProjector, int) - Method in class AirgunDisplay.AirgunGraphics
 
createKeyItem(GeneralProjector, int) - Method in class AIS.AISGraphics
 
createKeyItem(GeneralProjector, int) - Method in class annotationMark.MarkOverlayDraw
 
createKeyItem(GeneralProjector, int) - Method in class Array.StreamerOverlayGraphics
 
createKeyItem(GeneralProjector, int) - Method in class autecPhones.AutecGraphics
 
createKeyItem(GeneralProjector, int) - Method in class beakedWhaleProtocol.BeakedExperimentGraphics
 
createKeyItem(GeneralProjector, int) - Method in class beakedWhaleProtocol.BeakedGraphics
 
createKeyItem(GeneralProjector, int) - Method in class beakedWhaleProtocol.ShoreStationGraphics
 
createKeyItem(GeneralProjector, int) - Method in class clickDetector.NewClickOverlayGraphics
 
createKeyItem(GeneralProjector, int) - Method in class clipgenerator.ClipOverlayGraphics
 
createKeyItem(GeneralProjector, int) - Method in class ishmaelComms.IshmaelGraphics
 
createKeyItem(GeneralProjector, int) - Method in class landMarks.LandmarkGraphics
 
createKeyItem(GeneralProjector, int) - Method in class listening.ListeningEffortGraphics
 
createKeyItem(GeneralProjector, int) - Method in class listening.ThingHeardGraphics
 
createKeyItem(GeneralProjector, int) - Method in class loggerForms.LoggerFormGraphics
 
createKeyItem(GeneralProjector, int) - Method in class networkTransfer.receive.NetworkGPSDrawing
 
createKeyItem(GeneralProjector, int) - Method in class PamguardMVC.PamObservable
 
createKeyItem(GeneralProjector, int) - Method in class PamView.PamDetectionOverlayGraphics
Gets information for making up a key on various displays.
createKeyItem(GeneralProjector, int) - Method in interface PamView.PanelOverlayDraw
provide a graphics component (probably a JPanel) that can be incorporated into a key panel for maps, and anything else that uses overlay graphics.
createKeyItem(GeneralProjector, int) - Method in class simulatedAcquisition.SimGraphics
 
createKeyItem(GeneralProjector, int) - Method in class whistleDetector.PeakGraphics
 
createLocationListPanel() - Method in class videoRangePanel.vrmethods.AbstractVRMethod
Create a panel to show GPS location and allow user to change GPS location method.
createLocResultString(SLResult) - Static method in class staticLocaliser.SLCSVLogging
Create a string in .csv format containing data from a localisation result.
createLocVectors(TargetMotionInformation, Appearance, Appearance) - Method in class targetMotionModule.panels.MapPanel3D
Creates the localisation vectors in 3D space.
createLocVectors(T, Appearance, Appearance) - Method in class targetMotionOld.dialog.DialogMap3D
Creates the localisation vectors in 3D space.
createLookupList(PamCursor, String) - Method in class generalDatabase.lookupTables.LookUpTables
 
createLUT6() - Static method in class NMEA.NMEABitArray
Converts the character lookup data to an integer-to-character LUT, where the indexing is the standard ASCII character, converted to an integer.
createMainPanel() - Method in class targetMotionModule.panels.AbstractControlPanel
 
createMapFilePanel() - Method in class videoRangePanel.vrmethods.AbstractVRMethod
Creates a panel allowing the user to select a map and view map file.
CreateMapInfo - Class in generalDatabase
simple class for passing information about data map making from swing worker to dialog.
CreateMapInfo(int, String) - Constructor for class generalDatabase.CreateMapInfo
 
CreateMapInfo(int, PamDataBlock, String) - Constructor for class generalDatabase.CreateMapInfo
 
createMapPoint(File, BinaryHeaderAndFooter, ArrayList<PamDataBlock>) - Method in class binaryFileStorage.BinaryStore
Create a data map point and add it to the map.
createMaps() - Method in class targetMotionModule.panels.TargetMotionMainPanel
Create the maps.
createMatrixARow2D(double, Point3f, double, int) - Static method in class Localiser.timeDelayLocalisers.Hyperbolic
Calculate a row for matrix A of (Am=b) in hyperbolic localisation;
createMatrixARow3D(double, Point3f, double) - Static method in class Localiser.timeDelayLocalisers.Hyperbolic
Calculate a row for matrix A of (Am=b) in hyperbolic localisation;
createMatrixBrow2D(double, Point3f, double, int) - Static method in class Localiser.timeDelayLocalisers.Hyperbolic
Calculate a row for matrix A of (Am=b) in hyperbolic localisation - this is for the 2D case.
createMatrixBrow3D(double, Point3f, double) - Static method in class Localiser.timeDelayLocalisers.Hyperbolic
Calculate a row for matrix A of (Am=b) in hyperbolic localisation -for the 3D problem
createMaxAngleSummary(DifarDataUnit, double[]) - Method in class difar.DifarProcess
Create a summary of angles with maximum DIFAR level for each frequency
createMenu(Frame) - Method in class clickDetector.ClickTabPanelControl
 
createMenu(Frame) - Method in class clipgenerator.clipDisplay.ClipTabPanel
 
createMenu(Frame) - Method in class dataMap.DataMapPanel
 
createMenu(Frame) - Method in class dbht.DbHtTabPanel
 
createMenu(Frame) - Method in class listening.ThingHeardTabPanelControl
 
createMenu(Frame) - Method in class loggerForms.FormsTabPanel
 
createMenu(Frame) - Method in class Map.MapTabPanelControl
 
createMenu(Frame) - Method in class networkTransfer.receive.NetworkRXTabPanel
 
createMenu(Frame) - Method in class noiseMonitor.NoiseTabPanel
 
createMenu(Frame) - Method in class noiseOneBand.OneBandTabPanel
 
createMenu(Frame) - Method in interface PamView.PamTabPanel
 
createMenu(Frame) - Method in class SoundRecorder.RecorderTabPanel
 
createMenu(Frame) - Method in class staticLocaliser.panels.StaticLocalisationMainPanel
 
createMenu(Frame) - Method in class targetMotionModule.panels.TargetMotionMainPanel
 
createMenu(Frame) - Method in class userDisplay.UserDisplayTabPanelControl
 
createMenu(Frame) - Method in class UserInput.UserInputPanel
 
createMenu(Frame) - Method in class videoRangePanel.panels.VRTabPanelControl
 
createMenu(Frame) - Method in class whistleClassifier.WhistleClassifierTabPanelControl
 
createMergedArray(int, Color, Color) - Static method in class PamView.ColourArray
 
createMethod(PamArray, Streamer) - Method in class Array.streamerOrigin.GPSOriginSystem
 
createMethod(PamArray, Streamer) - Method in class Array.streamerOrigin.HydrophoneOriginSystem
 
createMethod(PamArray, Streamer) - Method in class Array.streamerOrigin.StaticOriginSystem
 
createMultiColouredArray(int, Color...) - Static method in class PamView.ColourArray
Create a multicoloured array of colours that merges in turn between each of the colours given in the list.
createNewDatabase(String) - Method in class generalDatabase.MSAccessDialogPanel
 
createNewDatabase(String) - Method in class generalDatabase.OOoDialogPanel
 
createNewGuardBand(String, String) - Method in class likelihoodDetectionModule.TreeTableModel
Creates a new guard band for the target configuration specified.
createNewGuardBand(String, String) - Method in class likelihoodDetectionModule.TreeTableModelAdapter
Creates the new guard band.
createNewSignalBand(String, String) - Method in class likelihoodDetectionModule.TreeTableModel
Creates a new signal band for the target configuration specified.
createNewSignalBand(String, String) - Method in class likelihoodDetectionModule.TreeTableModelAdapter
Creates the new signal band.
createNewSpectrogram(ArrayList<ArrayList<Float>>) - Method in class clickDetector.ConcatenatedSpectrogram
Creates a new spectrogram from current fft data.
createNewTargetConfiguration(String) - Method in class likelihoodDetectionModule.TreeTableModel
Creates a new target configuration using the identifier specified.
createNewTargetConfiguration(String) - Method in class likelihoodDetectionModule.TreeTableModelAdapter
Creates the new target configuration.
createNewZoomable(int) - Method in class dataPlots.mouse.PlotZoomerAdapter
Create a new zoomable.
createNMEAMenu(Frame) - Method in class NMEA.NMEAControl
 
createNorthPanel() - Method in class staticLocaliser.panels.StaticLocalisationMainPanel
Create the north panel.
createOfflineDataMap(Window) - Method in class Acquisition.AcquisitionControl
 
createOfflineDataMap(Window) - Method in class Acquisition.offlineFuncs.OfflineFileServer
 
createOfflineDataMap(Window) - Method in class binaryFileStorage.BinaryStore
 
createOfflineDataMap(Window) - Method in class decimator.DecimatorControl
 
createOfflineDataMap(Window) - Method in class fileOfflineData.OfflineFileControl
 
createOfflineDataMap(Window) - Method in class generalDatabase.DBControlUnit
 
createOfflineDataMap(Window, PamControlledUnit) - Method in class generalDatabase.DBControlUnit
Create offline datamap when modules are added in viewer mode AFTER initialisation.
createOfflineDataMap(Window) - Method in interface PamController.OfflineDataStore
Create a basic map of the data including first and last times and some kind of data/unit time count plus ideally some kind of start and stop time list of where there are gaps in the data.
createPamCursor(EmptyTableDefinition) - Method in class generalDatabase.DBControl
 
createPamCursor(EmptyTableDefinition) - Method in class generalDatabase.DBSystem
 
createPamCursor(EmptyTableDefinition) - Method in class generalDatabase.MSAccessSystem
 
createPamCursor(EmptyTableDefinition) - Method in class generalDatabase.MySQLSystem
 
createPamCursor(EmptyTableDefinition) - Method in class generalDatabase.OOoDBSystem
 
createPamCursor(EmptyTableDefinition) - Method in class generalDatabase.UCanAccessSystem
 
createPanel() - Method in class generalDatabase.MySQLDialogPanel
 
createPanel(String, int) - Method in class PamUtils.SelectFolder
 
createPanel(ArrayList<TabbedHidingPane.TabHidingPanel>) - Method in class PamView.hidingpanel.TabbedHidingPane
 
createPanel(Icon, String) - Method in class PamView.hidingpanel.TabbedHidingPane.ShowingPanel
 
createPanels() - Method in class staticLocaliser.panels.StaticLocalisationMainPanel
We must wait for intialisation to occur before creating some panels and registering datablocks.
createPatrioticArray(int) - Static method in class PamView.ColourArray
 
createPickableObject(Node) - Static method in class PamGraph3D.PamPanel3D
Makes a Java3D object suitable for pick reporting
createPopupMenu() - Method in class clickDetector.ConcatenatedSpectrogram
Pop up menu allowing user to change channel, switch between 2D and 3D plus access plotOptions
createPopupMenu(MouseEvent) - Method in class difar.display.DIFARGram
 
createPopupMenu() - Method in class Localiser.timeDelayLocalisers.MCMCPanel
 
createPopupMenu() - Method in class staticLocaliser.panels.MapPanel3DSL
 
createPopupMenu() - Method in class targetMotionModule.panels.MapPanel3D
 
createPopupMenu() - Method in class targetMotionOld.dialog.DialogMap3D
 
createPosVisualisation(PamDetection) - Method in class staticLocaliser.panels.LocalisationVisualisation
Creates a visualisation of all the possible time delays.
createProcessAnnotations(PamDataBlock, ProcessAnnotator) - Method in class PamguardMVC.PamDataBlock
Copies all annotations over from the source DataBlock, then adds in the new ones from the new datablock.
createProcessAnnotations(PamDataBlock, ProcessAnnotator, boolean) - Method in class PamguardMVC.PamDataBlock
Copies all annotations over from the source DataBlock, then adds in the new ones from the new datablock.
createRainbowArray(int) - Static method in class PamView.ColourArray
 
createRCFile - Variable in class clickDetector.ClickParameters
 
createSavePanel() - Method in class targetMotionModule.panels.TargetMotionMainPanel
Create panel which allows users to save results
createScrollComponenent(boolean) - Method in class pamScrollSystem.AbstractPamScrollerAWT
 
createScroller() - Method in class dataPlots.TDControl
 
createSeaSurface(float, Color3f) - Static method in class PamGraph3D.PamShapes3D
Creates a semi-transparent square surface of specified width and colour.
createSeaSurface(float) - Method in class targetMotionModule.panels.MapPanel3D
Creates BranchGroup which holds a translucent square with vertices of 2*width.
createSeaSurface(float) - Method in class targetMotionOld.dialog.DialogMap3D
Creates BranchGroup which holds a translucent square with vertices of 2*width.
createSections(int, double, int, double, double, int) - Method in class whistleClassifier.training.SequentialTrainingSelector
 
createShowingTab(String, Icon) - Method in class dataPlots.layout.CompoundHidingTabPane
 
createShowingTab(String, Icon) - Method in class PamView.hidingpanel.TabbedHidingPane
Create the showing tab for a panel.
createSidePanel() - Method in class videoRangePanel.vrmethods.IMUMethod
 
createSidePanel() - Method in class videoRangePanel.vrmethods.VRLandMarkMethod
 
createSimpleArray(String, double, double, double, int, double, double, double[]) - Static method in class Array.PamArray
Create a simple linear array.
createSpectrograms(ArrayList<ArrayList<Float>>, ColourArray.ColourArrayType) - Method in class clickDetector.ConcatenatedSpectrogram
 
createSpectrograms(ArrayList<ArrayList<Float>>, ColourArray.ColourArrayType) - Method in class PamGraph3D.spectrogram3D.Spectrogram3DPamGraph
 
createSpectroSceneGraph() - Method in class PamGraph3D.PamPanel3D
Create the 3D components and 3D interaction components
createSpectroSceneGraph() - Method in class PamGraph3D.spectrogram3D.Spectrogram3DPamGraph
Create the 3D components and 3D interaction components
createSpectroSurface(boolean) - Method in class PamGraph3D.spectrogram3D.Surface3D
Convert the FFT data to a 3D surface;
createSphere(Point3f, Appearance, float) - Static method in class PamGraph3D.PamShapes3D
Create a sphere of appearance ap moved to a position specified by point3f.
createSphere(Appearance, float) - Static method in class PamGraph3D.PamShapes3D
Create a sphere with appearance ap and specified size.
createSpList() - Method in class rocca.RoccaSightingDataUnit
Create a single string containing the species, using the '-' character separating the values
createSQLLoggingFields(PamTableDefinition) - Method in class Array.streamerOrigin.HydrophoneOriginSystem
Create any additional fields in the streamer logging table which may be needed.
createSQLLoggingFields(PamTableDefinition) - Method in class Array.streamerOrigin.StaticOriginSystem
 
createStandard(int) - Method in class clickDetector.BasicClickIdParameters
 
createStandardColourArray(int, ColourArray.ColourArrayType) - Static method in class PamView.ColourArray
 
createStandardDisplay() - Method in class clickDetector.ClickDisplayManager
 
createStringChecksum(StringBuffer) - Static method in class NMEA.AcquireNmeaData
Calculate the correct string buffer for an NMEA sentence.
createStripGeomtry(ArrayList<Point3f[]>) - Static method in class PamGraph3D.PamShapes3D
Creates the geometry for a shape defined by a series of circular strips.
createSummaryLine(DifarDataUnit, double[]) - Method in class difar.DifarProcess
Create a single line summary of DIFAR level against angle within a selected frequency range
createSurface(MultivariateRealFunction, double[]) - Method in class Localiser.timeDelayLocalisers.LikelihoodSurface
Calculates and displays a chi2 surface for an area around the location point.
createSymbol(ItemInformation) - Static method in class loggerForms.formdesign.propertypanels.SymbolPanel
Create a PAMSymbol from a Symbol item informatoin.
createTableDefinition() - Method in class likelihoodDetectionModule.thresholdDetector.DetectorSQLLogging
 
createTableDefinition() - Method in class loc3d_Thode.TowedArray3DSQLLogging
 
createTableDefinition() - Method in class whistleClassifier.WhistleClassifierLogging
 
createTableDefinition() - Method in class WorkshopDemo.WorkshopSQLLogging
 
createTDVisPanel3D() - Method in class staticLocaliser.panels.LocalisationVisualisation
Creates the Java3D component to display the time delay visualisation graph.
createTemplate() - Method in class clickDetector.ClickSpectrumTemplateEditDialog
Creates a click template from the saved instance variables.
createTimeBasedFilename(String, String) - Method in class Logging.LogToFlatFile
 
createVoteList() - Method in class rocca.RoccaSightingDataUnit
Create a single string containing the tree votes, using the '-' character separating the values.
createWatchDog() - Method in class PamController.PamController
Create a watchdog which will run independently and keep this thing going !
createWhiteToBlackArray(int) - Static method in class PamView.ColourArray
 
createXMLDataElement(Document, FormsDataUnit, Object) - Method in class loggerForms.controlDescriptions.ControlDescription
Create an XML element containging the control information and data for network communication.
createXMLDataItem(Document, String, Object) - Method in class loggerForms.controlDescriptions.ControlDescription
Create an xml element with a single data value.
Crossbearing(double, double, float[], double, double, TowedArray3DDataUnit) - Method in class loc3d_Thode.TowedArray3DProcess
 
crossBearings - Variable in class difar.dataSelector.DifarSelectParameters
 
crossCorrelation(double[], int, int, double[], int, int) - Method in class fftManager.FFT
Deprecated.
Performs cross correlation in the frequency domain using FFT and IFFT.
crossLink() - Method in class loc3d_Thode.CrossStationMatcher
 
crossLinkSimple() - Method in class loc3d_Thode.CrossStationMatcher
 
crossLinkWithEcho() - Method in class loc3d_Thode.CrossStationMatcher
 
CrossStationMatcher - Class in loc3d_Thode
 
CrossStationMatcher(int, double, double) - Constructor for class loc3d_Thode.CrossStationMatcher
 
CROverlayGraphics - Class in whistlesAndMoans
 
CROverlayGraphics(ConnectedRegionDataBlock, WhistleMoanControl) - Constructor for class whistlesAndMoans.CROverlayGraphics
 
csvFileBrowser(Window, String, int) - Static method in class PamView.PamFileBrowser
Opens a file browser for .csv files.
CTRL_ALL - Static variable in class loggerForms.formdesign.itempanels.NMEACtrlPanel
 
CTRL_EXAMPLE - Static variable in class loggerForms.formdesign.itempanels.NMEACtrlPanel
 
CTRL_FIELD - Static variable in class loggerForms.formdesign.itempanels.NMEACtrlPanel
 
CTRL_MODULE - Static variable in class loggerForms.formdesign.itempanels.NMEACtrlPanel
 
CTRL_STRING - Static variable in class loggerForms.formdesign.itempanels.NMEACtrlPanel
 
CtrlColPanel - Class in loggerForms.formdesign.itempanels
 
CtrlColPanel(ControlTitle, UDColName) - Constructor for class loggerForms.formdesign.itempanels.CtrlColPanel
 
CtrlKeyManager - Class in PamView
Class to add to a window in order to intercept and interpret Ctrl key strokes.
CtrlKeyManager() - Constructor for class PamView.CtrlKeyManager
 
CURRENT_DETECTIONS_CHANGED - Static variable in class targetMotionModule.TargetMotionControl
used whenever the current detections selected by the user have been changed
CURRENT_FORMAT - Static variable in class binaryFileStorage.BinaryStore
 
currentAxisName - Variable in class dataPlots.layout.GraphParameters
 
currentDataLine - Variable in class dataPlots.layout.DataListInfo
 
currentEventIndex - Variable in class targetMotionModule.TargetMotionLocaliser
Database index of current event.
currentEventIndex - Variable in class targetMotionOld.TargetMotionLocaliser
Database index of current event.
currentFile - Variable in class clickDetector.offlineFuncs.rcImport.ConversionProgress
 
currentFileLength - Variable in class clickDetector.offlineFuncs.rcImport.ConversionProgress
 
currentFilePosition - Variable in class clickDetector.offlineFuncs.rcImport.ConversionProgress
 
currentGPS(ActionEvent, GpsData) - Method in class PamUtils.LatLongEditableDialogStrip
 
currentID - Variable in class staticLocaliser.ClickControlParams
 
currentIMUType - Variable in class IMU.IMUParams
 
currentLocalisation - Variable in class targetMotionModule.panels.TargetMotionMainPanel
 
currentPoint - Variable in class dataGram.DatagramProgress
 
currentResultFilter - Variable in class staticLocaliser.StaticLocaliserParams
The currently selected results analysis type in the results filter manager.
currentRunConfig - Variable in class staticLocaliser.StaticLocalise
 
currentXMLFormat - Static variable in class loggerForms.FormsDataUnit
 
currShoreFile - Variable in class videoRangePanel.VRParameters
file name for the current image.
currTideFile - Variable in class videoRangePanel.VRParameters
file name for tide data (POLPRED format)
currTime - Variable in class nmeaEmulator.EmulationProgress
 
cursor - Variable in class difar.display.DIFARGram
 
CursorFinder - Class in generalDatabase.pamCursor
Class for managing PamCurosrs - returns the previous one if at all possible, but creates a new one if the connection has changed.
CursorFinder() - Constructor for class generalDatabase.pamCursor.CursorFinder
 
cursorLabel - Variable in class clickDetector.ClickBTDisplay
 
CurvePeakTracker - Class in likelihoodDetectionModule.thresholdDetector
This class is used to track the time (both sample and milliseconds since 01-01-1970), and the value of a curve.
CurvePeakTracker(long, long, double) - Constructor for class likelihoodDetectionModule.thresholdDetector.CurvePeakTracker
Constructor.
CustomSymbol - Class in PamView
 
CustomSymbol() - Constructor for class PamView.CustomSymbol
 
cyclePeriod - Variable in class smlPingerControl.SMLPingerParams
seconds between cycles.
cylindricalCoOrdinates - Variable in class Localiser.timeDelayLocalisers.MCMCParams
 
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