OfflineDAQDialogPanel offlineDAQDialogPanel
DaqSystem currentDaqSystem
javax.swing.JComboBox<E> deviceType
javax.swing.JPanel mainPanel
javax.swing.JComponent deviceSpecificPanel
javax.swing.JTextField sampleRate
javax.swing.JTextField nChannels
javax.swing.JTextField vPeak2Peak
javax.swing.JTextField preampGain
javax.swing.JTextField bandwidth0
javax.swing.JTextField bandwidth1
ChannelListPanel standardChannelListPanel
ChannelListPanel currentChannelListPanel
javax.swing.JPanel channelListPanelArea
java.lang.String daqSystemType
float sampleRate
int nChannels
double voltsPeak2Peak
int[] channelList
Preamplifier preamplifier
int[] hydrophoneList
FolderInputSystem folderInputSystem
javax.swing.JTextArea textArea
javax.swing.JProgressBar progressBar
int nFiles
int nErrors
int doneFiles
boolean subFolders
java.io.File folder
javax.swing.JLabel folderName
boolean running
boolean ran
Acquisition.CheckWavFileHeaders.CheckFiles checkFilesWorker
java.util.ArrayList<E> allFiles
javax.swing.JProgressBar progress
javax.swing.JLabel fileName
OfflineFileServer offlineFileServer
double dimE
PamSymbol airgunSymbol
boolean gunsThisVessel
int gunsReferencePosition
boolean hasGunsReferencePosition
int gunsMMSIVessel
double dimE
double dimF
boolean showExclusionZone
int exclusionRadius
java.awt.Color exclusionColor
boolean predictAhead
int secondsAhead
LatLong fixedPosition
AirgunParameters airgunParameters
ShipDimensionsPanel shipDrawing
ShipDimensionsFields shipDimensionsFields
AirgunDisplay.AirgunParametersDialog.ShipIDPanel shipIDPanel
AirgunDisplay.AirgunParametersDialog.ExclusionPanel exclusionPanel
AISLocalisation aisLocalisation
boolean isInRange
the flag can be set false again if new position data come within range.
boolean newUnit
java.lang.String dataType
StationType stationType
int messageId
int totalSentences
int sentenceNumber
int sequentialIdentifier
java.lang.String aisChannel
java.lang.String charData
The maximum string length of encapsulation is limited such that the total number of sentence characters does not exceed 82. This field supports a maximum of 62 valid characters for messages transferred using multiple sentences, and 63 valid characters for messages using a single sentence.
int fillBits
Each character in the preceding six-bit coded character string represents six binary bits. This parameter indicates the number of bits that were added to the end of the binary packet as a result of creating the last character of the string. When the coding of the last six-bit character of the message packet does not create additional "fill-bits," this value shall be set to zero. The value "0" indicates that no "fill-bits" were added. This field may not be null.
int mmsiNumber
java.util.ArrayList<E> positionReports
AISStaticData staticData
AISParameters aisParameters
javax.swing.JCheckBox showTail
javax.swing.JTextField tailLength
javax.swing.JCheckBox predictionArrow
javax.swing.JTextField predictionTime
java.lang.String nmeaSource
boolean limitRange
double maxRange_km
boolean showTail
int tailLength
boolean showPredictionArrow
int predictionLength
int messageId
int dataTerminalReady
int dataIndicator
int navigationStatus
double rateOfTurn
double speedOverGround
int positionAccuracy
LatLong latLong
double courseOverGround
double trueHeading
int utcSeconds
int utcMinutes
int utcHours
int repeatIndicator
int commsState
long timeMilliseconds
boolean reportOk
AISParameters aisParameters
SourcePanel sourcePanel
javax.swing.JCheckBox limitRange
javax.swing.JTextField maxRange
int imoNumber
java.lang.String callSign
java.lang.String shipName
int shipType
int etaMonth
int etaDay
int etaHour
int etaMinute
double staticDraught
java.lang.String destination
java.lang.String dataClass
double dimA
double dimB
double dimC
double dimD
long etaMilliseconds
boolean offPosition
boolean virtualAidFlag
int classBPart
AlarmParameters alarmParameters
SourcePanel sourcePanel
javax.swing.JComboBox<E> countType
javax.swing.JTextField alarmTime
javax.swing.JTextField alarmInterval
javax.swing.JTextField[] alarmCount
javax.swing.JButton settingsButton
AlarmControl alarmControl
javax.swing.JCheckBox[] alarmActionBoxes
javax.swing.JButton[] alarmActionButtons
javax.swing.JTextField holdTime
java.lang.String dataSourceName
int countType
long countIntervalMillis
long minAlarmIntervalMillis
double[] triggerCounts
boolean[] enabledActions
int holdSeconds
boolean hadHold
AlarmSerialSettings serialSettings
SerialPortPanel serialPanel
PlaySoundParams playSoundParams
PlaySound playSound
alarm.actions.sound.PlaySoundDialog.LevelPanel[] levelPanels
AmpParameters ampParameters
AmpControl ampControl
SourcePanel sourcePanel
javax.swing.JTextField[] ampGain
javax.swing.JCheckBox[] invert
javax.swing.JLabel[] labels
AngleParameters angleParameters
AngleControl angleControl
angleMeasurement.AngleCalibrationDialog.CalibrationPanel calibrationPanel
angleMeasurement.AngleCalibrationDialog.PlotPanel plotPanel
java.lang.Double latestRawAngle
angleMeasurement.AngleCalibrationDialog.TrueToMeasured trueToMeasured
angleMeasurement.AngleCalibrationDialog.MeasuredCorrection measuredCorrection
AngleCalibration angleCalibration
boolean paramErrors
double angleOffset
double geoReferenceAngle
double[] calibrationData
int calibrationInterval
AngleLoggingParameters angleLoggingParameters
SerialPortPanel serialPortPanel
FluxgateWorldParameters fluxgateWorldParameters
FluxgateWorldAngles fluxgateWorldAngles
AngleLoggingDialogPanel angleLoggingDialogPanel
javax.swing.JLabel currentRawAngle
javax.swing.JLabel currentCorrectedAngle
javax.swing.JButton setZero
javax.swing.JButton cancelZero
javax.swing.JTextField geoReferenceAngle
javax.swing.JCheckBox invertAngles
javax.swing.JComboBox<E> readRateList
javax.swing.Timer timer
boolean dontGet
java.lang.Double latestRawAngle
AngleVeto angleVeto
javax.swing.JTextField startAngle
javax.swing.JTextField endAngle
AngleVetoes angleVetoes
AngleVetoParameters angleVetoParameters
javax.swing.table.AbstractTableModel tableData
PamTable list
javax.swing.JButton addButton
javax.swing.JButton editbutton
javax.swing.JButton deleteButton
MarkDataUnit annotationDataUnit
PamTextDisplay startTime
PamTextDisplay duration
PamTextDisplay fRange
java.util.ArrayList<E> dialogPanels
MarkModule annotationModule
HydrophoneDialogPanel hydrophoneDialogPanel
ChannelPanel channelPanel
EnvironmentPanel environmentPanel
HydrophoneDiagram hydrophoneDiagram
javax.swing.JButton okButton
javax.swing.JButton cancelButton
javax.swing.JButton newArrayButton
javax.swing.JButton copyArrayButton
javax.swing.JButton importArrayButton
javax.swing.JButton exportArrayButton
javax.swing.JButton deleteArrayButton
javax.swing.JButton renameArrayButton
javax.swing.JButton helpButton
PamArray selectedArray
int iD
long timeMillis
int streamerId
java.lang.String type
double[] coordinate
double[] coordinateError
double tilt
double heading
double sensitivity
double preampGain
double[] bandwidth
boolean dontInvertDepth
Hydrophone hydrophone
Array.HydrophoneElementDialog.GeneralPanel generalPanel
Array.HydrophoneElementDialog.CoordinatePanel coordinatePanel
Array.HydrophoneElementDialog.SensitivityPanel sensitivityPanel
PamArray currentArray
InterpolationDialogPanel interpolationDialogPanel
PamArray pamArray
int[] phoneToStreamerLUT
java.util.ArrayList<E> streamers
java.util.ArrayList<E> hydrophoneArray
double speedOfSound
double speedOfSoundError
java.lang.String arrayName
java.lang.String arrayFile
int originInterpolation
int hydrophoneInterpolation
int arrayShape
java.lang.Class<T> arrayLocatorClass
MasterLocator masterLocator
PamDataBlock<Tunit extends PamDataUnit> hydrophoneDataBlock
GpsDataUnit lastGpsUnit
EmptyLocatorSettings locatorSettings
GpsDataUnit lastFoundUnit
long lastSearchTime
java.util.ArrayList<E> allLocatorSettings
java.util.ArrayList<E> allOriginSettings
java.lang.Class<T> locatorClass
java.lang.Class<T> originClass
double[] coordinate
double[] coordinateError
java.lang.String streamerName
boolean enableOrientation
java.lang.Double heading
java.lang.Double pitch
java.lang.Double roll
PamArray pamArray
int streamerIndex
javax.swing.JTextField x
javax.swing.JTextField y
javax.swing.JTextField z
javax.swing.JTextField dx
javax.swing.JTextField dy
javax.swing.JTextField dz
javax.swing.JTextField heading
javax.swing.JTextField pitch
javax.swing.JTextField roll
javax.swing.JCheckBox enableOrientation
Streamer defaultStreamer
javax.swing.JTextField streamerName
javax.swing.JPanel originPanel
javax.swing.JComponent currentOriginComponent
javax.swing.JComboBox<E> originMethod
javax.swing.JComboBox<E> localiserMethod
HydrophoneOriginMethod currentOriginMethod
InterpolationDialogPanel interpolationPanel
PamArray currentArray
boolean constructed
int streamerIndex
HydrophoneOriginSystem hydropheonOrigin
HydrophoneLocatorSystem hydropheonLocator
javax.swing.JComboBox<E> streamerOriginMethods
javax.swing.JComboBox<E> hydrophoneLocatorMethods
javax.swing.JComboBox<E> streamerID
StreamerImportParams params
GpsData staticGpsData
ArrayAccelParams accelParams
ArrayAccelControl accelControl
MccPanel mccPanel
javax.swing.JTextField[] zeroVolts
javax.swing.JTextField[] voltsPerG
javax.swing.JTextField[] dimChannel
javax.swing.JTextField readInterval
javax.swing.JTextField rollOffset
javax.swing.JTextField pitchOffset
javax.swing.JButton setZeroButton
double[] zeroVolts
double[] voltsPerG
int boardNumber
int boardRange
double readInterval
int[] dimChannel
int streamerIndex
double rollOffset
double pitchOffset
BeakedParameters beakedParameters
BeakedControl beakedControl
java.awt.Frame parentFrame
javax.swing.JTextField maxAcousticRange
javax.swing.JTextField maxExperimentRange
javax.swing.JComboBox<E> distributions
LatLongDialogStrip latStrip
LatLongDialogStrip longStrip
javax.swing.JTextField stationHeight
javax.swing.JCheckBox monitorVideoRange
SourcePanel videoSource
javax.swing.JCheckBox measureAngles
javax.swing.JCheckBox showLine
javax.swing.JTextField lineLength
javax.swing.JTextField updateInterval
SourcePanel angleSource
LatLong vesselStart
LatLong trackStart
LatLong trackEnd
LatLong alternateEnd
double alternateCourse
double perpDistance
double totalTrackLength
int status
double course
java.lang.String comment
long endTime
BeakedDataUnit experimentLocationData
BeakedControl beakedControl
BeakedLocationData beakedLocationData
LatLongDialogStrip latStrip
LatLongDialogStrip longStrip
javax.swing.JLabel msgLabel
javax.swing.JComboBox<E> sourceList
javax.swing.JTextArea commentArea
javax.swing.JTextField range
javax.swing.JTextField bearing
javax.swing.JRadioButton enterRangeBearing
javax.swing.JRadioButton enterLatLong
javax.swing.JButton updateAngle
javax.swing.JCheckBox autoAngle
double latestMeasuredAngle
boolean hasMeasuredAngle
ShoreStationDataUnit shoreStationDataUnit
AngleDataBlock angleDataBlock
VRDataUnit vrDataUnit
int maxAcousticRange
int maxExperimentRange
LatLong shoreStation
double shoreStationHeight
int distributionType
boolean measureAngles
boolean showLine
java.lang.String angleDataSource
boolean useVideoRange
java.lang.String videoRangeDataSource
double lineLength
double angleUpdateInterval
int headerLength
int headerFormat
java.lang.String pamguard
java.lang.String pamguardVersion
java.lang.String pamguardBranch
long dataDate
long analysisDate
long fileStartSample
java.lang.String moduleType
java.lang.String moduleName
java.lang.String streamName
byte[] extraInfo
BinaryHeader binaryHeader
BinaryFooter binaryFooter
ModuleHeader moduleHeader
ModuleFooter moduleFooter
java.net.URI relativeURI
Datagram datagram
BinaryStoreSettings binaryStoreSettings
BinaryStorageDialogPanel binaryStorageDialogPanel
GroupMeans groupMeans
Jama.Matrix rMatrix
double logDetSigma
GroupMeans groupMeans
Jama.Matrix[] rInverse
double[] logDetSigma
AbstractWekaClassifier abstractWekaClassifier
weka.classifiers.AbstractClassifier wekaClassifier
int[] argumentCount
javax.swing.JTextField[][] paramFields
javax.swing.JCheckBox[] checkBoxes
int VScale
double maxICI
double minICI
double[] amplitudeRange
int nBearingGridLines
int nAmplitudeGridLines
int nICIGridLines
boolean showEchoes
int minClickLength
int maxClickLength
int minClickHeight
int maxClickHeight
double timeRange
int displayChannels
boolean view360
boolean amplitudeSelect
double minAmplitude
boolean showUnassignedICI
boolean showEventsOnly
boolean showANDEvents
boolean logICIScale
boolean[] showSpeciesList
int colourScheme
boolean showKey
boolean trackedClickMarkers
java.lang.String userAlarmFile
java.lang.String name
boolean useDefault
boolean fileIsLoaded
int[] nBTDisplays
int[] nWaveDisplays
int[] nSpectrumDisplays
int[] nTriggerDisplays
int[] nWignerDisplays
int[] nConcatSpecDisplays
int[] nIDIHistogramDisplays
int lastMode
boolean initialised
java.lang.String rawDataSource
int channelBitmap
int triggerBitmap
int[] channelGroups
int groupingType
double dbThreshold
double longFilter
double longFilter2
double shortFilter
int preSample
int postSample
int minSep
int maxLength
FilterParams preFilter
FilterParams triggerFilter
boolean sampleNoise
double noiseSampleInterval
int clickClassifierType
boolean runEchoOnline
boolean discardEchoes
boolean classifyOnline
boolean discardUnclassifiedClicks
boolean createRCFile
boolean rcAutoNewFile
float rcFileLength
java.lang.String storageDirectory
java.lang.String storageInitials
java.util.ArrayList<E> clickAlarmList
boolean publishTriggerFunction
boolean waveShowEnvelope
boolean waveFixedXScale
boolean viewFilteredWaveform
FFTFilterParams waveformFilterParams
boolean singleWavePlot
DelayMeasurementParams delayMeasurementParams
int radarColour
int spectrogramColour
int showShortTrains
double minTimeSeparation
double minBearingSeparation
double defaultRange
boolean runClickTrainId
double[] iciRange
double maxIciChange
double okAngleError
double initialPerpendicularDistance
int minTrainClicks
double iciUpdateRatio
ClickSpectrumParams clickSpectrumParams
ClickSpectrum clickSpectrum
javax.swing.JCheckBox logScale
javax.swing.JTextField logRange
javax.swing.JCheckBox showEventInfo
javax.swing.JComboBox<E> channelChoice
javax.swing.JCheckBox smoothData
javax.swing.JRadioButton plotSpectrogram
javax.swing.JRadioButton plotCepstrum
javax.swing.JTextField smoothBins
boolean isViewer
ClickSpectrumTemplateParams clickSpectrumTemplateParams
SelectFolder templateFileLocation
java.util.ArrayList<E> previousFiles
ClickTemplate clickTemplate
javax.swing.JButton browseButton
javax.swing.JButton createButton
javax.swing.JComboBox<E> templateList
java.awt.Window parentFrame
java.io.File clickTemplateFile
ClickSpectrum clickSpectrum
ClickSpectrumTemplateParams clickSpectrumTemplateParams
ClickControl clickControl
double[] averageFFT
double[] stdFFT
double[] averageFFTLog
double[] stdFFTLog
java.awt.Color fftColour
java.lang.String species
float sampleRate
int N
java.lang.Integer channel
javax.swing.JSplitPane mainPanel
OfflineEventListPanel offlineEventListPanel
clickDetector.ClickSpectrumTemplateEditDialog.TemplateTable templateTable
java.util.ArrayList<E> selectedEvents
clickDetector.ClickSpectrumTemplateEditDialog.SpectrumPlotPanel spectrumPlot
javax.swing.JTabbedPane tabbedPane
java.awt.Window parentFrame
javax.swing.JCheckBoxMenuItem logScale
javax.swing.JCheckBoxMenuItem confidenceIntervals
java.lang.Boolean logScaleb
double logMinimum
double logMaximum
java.lang.Boolean confidenceIntervalsb
javax.swing.JButton save
javax.swing.JButton load
javax.swing.JButton colour
javax.swing.JButton addTo
javax.swing.JButton clearAll
ClickControl clickControl
ClickTabPanelControl clickTabPanelControl
float sampleRate
int resizeCount
boolean firstMaximise
java.lang.String name
int code
PamSymbol symbol
java.lang.Boolean discard
int whichSelections
double[] band1Freq
double[] band2Freq
double[] band1Energy
double[] band2Energy
double bandEnergyDifference
double[] peakFrequencySearch
double[] peakFrequencyRange
double[] peakWidth
double widthEnergyFraction
double[] meanSumRange
double[] meanSelRange
double[] clickLength
double lengthEnergyFraction
ColourArray.ColourArrayType colourMap
boolean logVal
double maxLogValS
boolean normaliseAll
javax.swing.JPanel mainPanel
ConcatenatedSpectrogram concatenatedSpectrogram
ConcatenatedSpectParams concatenatedSpectParams
javax.swing.JComboBox<E> colourList
javax.swing.JCheckBox logScale
javax.swing.JTextField logRange
javax.swing.JCheckBox normalise
IDI_DisplayParams idiParams
IDI_Display idiDisplay
javax.swing.JTextField highResIdiBinScale
javax.swing.JTextField lowResIdiBinScale
javax.swing.JTextField timeBinScale
javax.swing.JTextField maxHighResBin
javax.swing.JTextField maxLowResBin
javax.swing.JTextField maxHighCount
javax.swing.JTextField maxLowCount
javax.swing.JTextField maxTimeBin
javax.swing.JCheckBox outputButton
javax.swing.JTextField outputDirTxt
javax.swing.JButton outputDirectoryButton
int highResIdiBinScale
int lowResIdiBinScale
int timeBinScale
int maxHighResBin
int maxLowResBin
int maxHighCount
int maxLowCount
int maxTimeBin
java.io.File outputFilename
boolean saveOutput
WignerPlotOptions wignerPlotOptions
javax.swing.JCheckBox limitLength
FFTLengthModel fftLengthModel
javax.swing.JSpinner fftLengthSpinner
javax.swing.JTextField fftLengthData
ClickAlarmParameters clickAlarmParameters
ClickControl clickControl
clickDetector.alarm.ClickAlarmDialog.SpeciesPanel speciesPanel
javax.swing.JPanel mainPanel
javax.swing.JPanel classifierSpecificContainer
javax.swing.JComboBox<E> typeList
javax.swing.JCheckBox classifyOnline
javax.swing.JCheckBox discardUnclassified
ClickControl clickControl
ClickParameters clickParameters
ClickIdentifier currentIdentifier
ClassifyDialogPanel classifierDialogPanel
java.awt.Frame parentFrame
ClickAlarm alarm
java.lang.Boolean alarmEnabled
long prevTime
long maxTime
float sampleRate
BasicClickIdParameters basicClickIdParameters
javax.swing.JButton upButton
javax.swing.JButton downButton
javax.swing.JButton newButton
javax.swing.JButton editButton
javax.swing.JButton deleteButton
javax.swing.JCheckBox runOnline
javax.swing.JTable typesTable
clickDetector.ClickClassifiers.ClickTypesDialog.ClickTypesTableData tableData
java.lang.String[] columnNames
ClickControl clickControl
ClickTypeParams clickTypeParams
BasicClickIdParameters basicClickIdParameters
javax.swing.JTextField name
javax.swing.JTextField code
javax.swing.JCheckBox[] enableBoxes
javax.swing.JTextField[] band1Freq
javax.swing.JTextField[] band2Freq
javax.swing.JTextField[] band1Energy
javax.swing.JTextField[] band2Energy
javax.swing.JTextField bandEnergyDifference
javax.swing.JTextField[] peakFrequencySearch
javax.swing.JTextField[] peakFrequencyRange
javax.swing.JTextField[] peakWidth
javax.swing.JTextField widthEnergyFraction
javax.swing.JTextField[] clickLength
javax.swing.JTextField[] meanSumRange
javax.swing.JTextField[] meanSelRange
javax.swing.JTextField lengthEnergyFraction
javax.swing.JTextField maxTime
javax.swing.JButton symbolTypeButton
javax.swing.JButton filtersButton
javax.swing.JPopupMenu typeMenu
javax.swing.JComboBox<E> alarmChooser
clickDetector.ClickClassifiers.basic.ClickTypeDialog.SymbolPanel symbolPanel
clickDetector.ClickClassifiers.basic.ClickTypeDialog.EnergyPanel energyPanel
clickDetector.ClickClassifiers.basic.ClickTypeDialog.PeakPanel peakPanel
clickDetector.ClickClassifiers.basic.ClickTypeDialog.MeanFreqPanel meanFreqPanel
clickDetector.ClickClassifiers.basic.ClickTypeDialog.LengthPanel lengthPanel
clickDetector.ClickClassifiers.basic.ClickTypeDialog.AlarmPanel alarmPanel
CodeHost codehost
SweepClassifier sweepClassifier
SweepClassifierSet sweepClassifierSet
ClickControl clickControl
int classifierItemRow
javax.swing.JComboBox<E> alarmChooser
SweepClassifier sweepClassifier
java.util.ArrayList<E> idBlocks
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.FilterBlock filterBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.OptionsBlock optionsBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.LengthBlock lengthBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.EnergyBandsBlock energyBandsBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.PeakFreqBlock peakFreqBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.ZeroXBlock zeroXBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.AlarmBlock alarmBlock
javax.swing.JTextField maxTime
int freqTextLength
int dbTextLength
java.lang.String name
int speciesCode
boolean discard
PamSymbol symbol
boolean enable
int channelChoices
boolean restrictLength
int restrictedBins
boolean enableLength
int lengthSmoothing
double lengthdB
double minLength
double maxLength
boolean enableEnergyBands
double[] testEnergyBand
double[][] controlEnergyBand
double[] energyThresholds
boolean enableFFTFilter
FFTFilterParams fftFilterParams
boolean enablePeak
boolean enableWidth
boolean enableMean
double[] peakSearchRange
double[] peakRange
double[] peakWidthRange
double[] meanRange
int peakSmoothing
double peakWidthThreshold
boolean enableZeroCrossings
int[] nCrossings
double[] zcSweep
ClickParameters clickParameters
javax.swing.JTextField alarmFileTxt
javax.swing.JRadioButton defaultAlarm
javax.swing.JRadioButton userAlarm
javax.swing.ButtonGroup buttonGroup
javax.swing.JButton browseFiles
javax.swing.JButton renameAlarm
javax.swing.JButton removeAlarm
javax.swing.JButton addAlarm
javax.swing.JFileChooser fc
javax.swing.JComboBox<E> alarmChooser
java.lang.String[] alarmList
ClickAlarm currentAlarm
BTDisplayParameters btDisplayParameters
ClickControl clickControl
javax.swing.JRadioButton showBearing
javax.swing.JRadioButton showAmplitude
javax.swing.JRadioButton showICI
javax.swing.JRadioButton showSlant
javax.swing.JTextField minICI
javax.swing.JTextField maxICI
javax.swing.JTextField amplitudeRange0
javax.swing.JTextField amplitudeRange1
javax.swing.JTextField hGridiLines
javax.swing.JCheckBox trackedClickMarkers
javax.swing.JCheckBox view360
javax.swing.JCheckBox showEchoes
javax.swing.JCheckBox showUnassignedICI
javax.swing.JCheckBox logICIScale
clickDetector.dialogs.ClickDisplayDialog.BTPanel btPanel
clickDetector.dialogs.ClickDisplayDialog.SizePanel sizePanel
clickDetector.dialogs.ClickDisplayDialog.SpeciesPanel speciesPanel
ClickParameters clickParameters
javax.swing.JRadioButton showAll
javax.swing.JRadioButton showSome
javax.swing.JRadioButton showNone
javax.swing.JTextField minTime
javax.swing.JTextField minTheta
javax.swing.JTextField lineLength
ClickParameters clickParameters
ClickControl clickControl
javax.swing.JTextField threshold
javax.swing.JTextField longFilter
javax.swing.JTextField longFilter2
javax.swing.JTextField shortFilter
javax.swing.JTextField preSample
javax.swing.JTextField postSample
javax.swing.JTextField minSep
javax.swing.JTextField maxLength
javax.swing.JButton okButton
javax.swing.JButton cancelButton
GroupedSourcePanel sourcePanel
javax.swing.JCheckBox[] triggerList
clickDetector.dialogs.ClickParamsDialog.TriggerPanel triggerPanel
clickDetector.dialogs.ClickParamsDialog.LengthPanel lengthPanel
clickDetector.dialogs.ClickParamsDialog.NoisePanel noisePanel
DelayOptionsPanel delayOptionsPanel
EchoDialogPanel echoDialogPanel
clickDetector.dialogs.ClickParamsDialog.EchoPanel echoPanel
ClickParameters clickParameters
javax.swing.JCheckBox createRCFile
javax.swing.JCheckBox rcAutoNewFile
javax.swing.JTextField storageDirectory
javax.swing.JTextField storageInitials
javax.swing.JTextField rcFileLength
javax.swing.JButton browseDirectory
javax.swing.JFileChooser fc
ClickParameters clickParameters
javax.swing.JCheckBox runClickTrainId
ClickParameters clickParameters
ClickColoursPanel radarColours
ClickColoursPanel specColours
ClickParameters clickParameters
ClickWaveform clickWaveform
javax.swing.JCheckBox showEnvelope
javax.swing.JCheckBox fixedXScale
javax.swing.JCheckBox viewFiltered
javax.swing.JRadioButton separatePlots
javax.swing.JRadioButton singlePlot
javax.swing.JButton filterSettings
EchoDetectionSystem echoDetectionSystem
EchoDialogPanel echoDialogPanel
ClickControl clickControl
javax.swing.JTextArea textOutput
javax.swing.JRadioButton check
javax.swing.JRadioButton checkAndFix
javax.swing.JTextField taskText
javax.swing.JProgressBar taskProgress
javax.swing.JButton okButton
javax.swing.JButton cancelButton
boolean stopChecks
boolean isRunning
OfflineEventDataUnit offlineEventDataUnit
javax.swing.JTextField eventNo
OfflineEventListPanel offlineEventListPanel
ClickControl clickControl
java.awt.Window parentFrame
OfflineEventDataBlock offlineEventDataBlock
javax.swing.JPanel mainPanel
OfflineEventListPanel offlineEventListPanel
ClickControl clickControl
ClickBTDisplay btDisplay
ClickDetection singleClick
javax.swing.JButton newEventButton
java.awt.Window parentFrame
OfflineEventDataBlock offlineEventDataBlock
java.util.ArrayList<E> markedClicks
OfflineEventListPanel offlineEventListPanel
ClickControl clickControl
OfflineEventDataUnit offlineEventDataUnit
ClickControl clickControl
javax.swing.JTextField eventNumber
LookupComponent speciesList
javax.swing.JTextField minNum
javax.swing.JTextField bestNum
javax.swing.JTextField maxNum
DBTextArea commentText
OfflineEventListPanel offlineEventListPanel
ClickControl clickControl
ClickControl clickControl
BinaryStore binaryStore
BinaryStorageDialogPanel binaryStorageDialogPanel
BinaryStoreSettings binaryStoreSettings
SelectFolder rainbowFolder
ClickParameters clickParameters
javax.swing.JLabel readText
javax.swing.JLabel writeText
javax.swing.JProgressBar readProgress
javax.swing.JProgressBar writeProgress
clickDetector.offlineFuncs.rcImport.BatchRainbowFileConversion.ConversionWorker conversionWorker
java.lang.String rcFolderName
boolean rcSubFolders
boolean stopFlag
ClickDetector clickDetector
ClickBinaryDataSource clickBinaryDataSource
RainbowFileMap rainbowFileMap
javax.swing.JTextField databaseName
javax.swing.JButton databaseBrowse
javax.swing.AbstractButton importDatabase
ClickControl clickControl
BinaryStore binaryStore
javax.swing.JTextField databaseName
javax.swing.JButton databaseBrowse
javax.swing.JCheckBox importDatabase
javax.swing.JLabel progressText
javax.swing.JProgressBar progressBar
RainbowDatabseConverter dbConverter
ClicksOffline clicksOffline
clickDetector.offlineFuncs.rcImport.RainbowDatabaseConversion.ConvertWorker conWorker
boolean stopNow
ClickControl clickControl
java.lang.Boolean returnValue
ClickDetection click
int[] channels
int[] waveStarts
int markLength
clickDetector.waveCorrector.WaveCorrector.WaveformPlot waveformPlot
clickDetector.waveCorrector.WaveCorrector.WaveformAxes waveformAxes
clickDetector.waveCorrector.WaveCorrector.CorrelationAxes correlationAxes
clickDetector.waveCorrector.WaveCorrector.CorrelationPlot correlationPlot
java.awt.Dimension preferredSize
double[][] waves
double timeOffset
double sampleRate
double waveMax
double[] corrFunction
double[][] interpolatedMaxima
javax.swing.JLabel maxS
javax.swing.JLabel currS
javax.swing.JLabel maxT
javax.swing.JLabel currT
javax.swing.JLabel maxC
javax.swing.JLabel currC
javax.swing.JButton setMaxButton
double maxTime
ClipSettings clipSettings
SourcePanel sourcePanel
clipgenerator.ClipDialog.StoragePanel storagePanel
clipgenerator.ClipDialog.ClipPanel clipPanel
ClipControl clipControl
ClipSettings clipSettings
javax.swing.JTextField[] rangeFields
java.lang.String dataName
boolean enable
double preSeconds
double postSeconds
int channelSelection
java.lang.String clipPrefix
boolean useDataBudget
int dataBudget
double budgetPeriodHours
java.lang.Double mapLineLength
boolean hadMapLine
ClipGenSetting clipGenSetting
javax.swing.JTextField preSeconds
javax.swing.JTextField postSeconds
javax.swing.JComboBox<E> channelSel
javax.swing.JRadioButton budgetOn
javax.swing.JRadioButton budgetOff
javax.swing.JTextField budgetPeriod
javax.swing.JTextField dataBudget
javax.swing.JTextField fileInitials
java.lang.String dataSourceName
java.lang.String outputFolder
boolean datedSubFolders
int storageOption
java.util.ArrayList<E> clipGenSettings
double amlitudeMinVal
double amplitudeRangeVal
double imageVScale
double imageHScale
int logFFTLength
ColourArray.ColourArrayType colourMap
boolean showTriggerOverlay
double frequencyScale
int maxClips
int maxMinutes
int newClipOrder
boolean showControlPanel
double amplitudeMinMin
double amplitudeMinMax
double amplitudeMinStep
double amplitudeRangeMin
double amplitudeRangeMax
double amplitudeRangeStep
ClipDisplayPanel clipDisplayPanel
ClipDataUnit clipDataUnit
PamDataUnit triggerDataUnit
javax.swing.JPanel axisPanel
javax.swing.JPanel imagePanel
java.awt.image.BufferedImage image
int fontHeight
int borderSize
int fontAscent
java.awt.FontMetrics fm
ClipDisplayDecorations displayDecorations
Datagram dataGram
long filePos
CPODControl cpodControl
CPODParams cpodParams
SelectFolder selectFolder
javax.swing.JTextField startOffset
javax.swing.JTextField timeStretch
int intervalSeconds
OfflineDataMapPoint offlineDataMapPoint
java.util.ArrayList<E> dataPoints
Datagram datagram
long startTime
long endTime
float[] data
int nDataUnits
DatagramManager datagramManager
DatagramSettings datagramSettings
javax.swing.JLabel infoArea
javax.swing.JTextField datagramSeconds
javax.swing.JProgressBar mapPointProgress
javax.swing.JLabel blockName
int nDataBlocks
int nMapPoints
javax.swing.JProgressBar fileProgress
javax.swing.JLabel textMsg
BinaryOfflineDataMapPoint currentMapPoint
DataMapControl dataMapControl
SummaryPanel summaryPanel
ScalePanel scalePanel
ScrollingDataPanel scrollingDataPanel
java.awt.Dimension graphDimension
DataMapControl dataMapControl
ScrollingDataPanel scrollingDataPanel
PamDataBlock<Tunit extends PamDataUnit> dataBlock
DataStreamPanel.DataGraph dataGraph
dataMap.DataStreamPanel.DataName dataName
java.awt.Color binaryColour
java.awt.Color haveDataColour
java.awt.Color databaseColour
double yScaleMin
double yScaleMax
double pixelsPerMilli
int totalDatas
int maxDatas
boolean graphVisible
double[] arrowX
double[] arrowY
java.awt.Polygon startTimeArrow
java.awt.Polygon endTimeArrow
boolean hasDatagram
java.awt.image.BufferedImage datagramImage
double[] minMaxVal
boolean showDatagram
boolean showDataCounts
javax.swing.JCheckBoxMenuItem showDatagramMenu
javax.swing.JCheckBoxMenuItem showDataCountsMenu
int totalWheelRotation
javax.swing.JPopupMenu graphMenu
long menuMouseTime
PamAxis yAxis
double wheelScrollFactor
double lastPlotted2DmaxVal
double lastPlotted2DminVal
ColourArray datagramColours
javax.swing.JPanel scrolledPanel
javax.swing.JPanel scrollPanelContainer
DataMapControl dataMapControl
DataMapPanel dataMapPanel
javax.swing.JScrollBar hScrollBar
java.util.ArrayList<E> dataStreamPanels
SettingsStrip settingsStrip
java.util.ArrayList<E> offlineDataStores
long screenStartMillis
long screenEndMillis
double screenSeconds
javax.swing.BoxLayout boxLayout
DataMapLayout dataMapLayout
javax.swing.JScrollPane mainScrollPane
int lastHScaleChoice
int lastWidth
ScrollingDataPanel scrollingDataPanel
PamController pamController
java.util.LinkedList<E> quickFinds
double pixelsPerMilli
long startMillis
TDControl tdControl
javax.swing.JButton addGraph
javax.swing.JButton removeGraph
javax.swing.JCheckBox vertical
javax.swing.JPopupMenu popMenu
java.util.ArrayList<E> graphButtons
javax.swing.JPanel graphPanel
javax.swing.JPanel graphOutPanel
DbHtControl dbHtControl
DbHtParameters params
javax.swing.JTable thresholdTable
dbht.DbHtDialog.ThresholdTableDataModel tdModel
dbht.DbHtDialog.ParamsPanel paramsPanel
dbht.DbHtDialog.BodePlotAxis bodePlotAxis
dbht.DbHtDialog.TapPlotAxis tapPlotAxis
dbht.DbHtDialog.BodePlot bodePlot
dbht.DbHtDialog.TapPlot tapPlot
SourcePanel sourcePanel
double currentSampleRate
FIRArbitraryFilter firArbfilter
DbHtControl dbhtControl
DbHtDisplayParams params
javax.swing.JCheckBox autoScale
javax.swing.JTextField minAmp
javax.swing.JTextField maxAmp
javax.swing.JCheckBox showGrid
javax.swing.JCheckBox drawLines
javax.swing.JCheckBox colourByChannel
javax.swing.JTextField symbolSize
javax.swing.JCheckBox[] showMeasure
java.lang.String dataSource
int measurementInterval
int channelMap
int filterLogOrder
double chebyGamma
double[] frequencyPoints
double[] hearingThreshold
java.io.File lastImportFile
DbHtAlarmParameters dbHtAlarmParameters
javax.swing.JRadioButton[] measures
DbHtAlarmCounter dbHtAlarmCounter
DbHtSummaryParams dbHtSummaryParams
javax.swing.JTextField exportInterval
java.lang.String rawDataSource
float newSampleRate
int channelMap
FilterParams filterParams
DecimatorControl decimatorControl
javax.swing.JTextField newSampleRate
SourcePanel sourcePanel
javax.swing.JButton filterButton
javax.swing.JLabel sourceSampleRate
float sampleRate
java.awt.Frame parentFrame
boolean isViewer
OfflineDAQDialogPanel offlineDAQDialogPanel
DepthSystem depthSystem
DepthControl depthControl
DepthParameters depthParameters
depthReadout.DepthDialog.DevicePanel devicePanel
int iBoard
int range
MccDepthParameters.MccSensorParameters[] mccSensorParameters
MccDepthParameters mccDepthParameters
DepthControl depthControl
MccDepthSystem mccDepthSystem
MccJniInterface mccJniInterface
DepthParameters depthParameters
depthReadout.MccDialog.BoardPanel boardPanel
depthReadout.MccDialog.SensorsPanel sensorsPanel
int keepRawDataTime
java.lang.String rawDataName
int queuedDataKeepTime
int processedDataKeepTime
boolean clearQueueAtStart
boolean clearProcessedDataAtStart
double secondsToPreceed
java.util.ArrayList<E> triggerParams
int calibrationChoice
java.lang.Integer difarGramDividerPos
java.lang.Integer horizontalDividerPos
java.util.ArrayList<E> speciesParams
java.util.ArrayList<E> groupList
int vesselClipLength
int vesselClipSeparation
int vesselClipNumber
boolean hideVesselClips
LookupList speciesList
LookupItem[] favSpecies
boolean singleClickSave
boolean showDifarGramKey
boolean showDifarGramSummary
boolean showDifarGramFreqLimits
DifarParameters.DifarDemuxTypes demuxType
float autoSaveTime
boolean autoSaveDResult
boolean autoSaveAngleOnly
LookupItem Species
DifarParameters.FirstOrders firstOrder
DifarParameters.SecondOrders secondOrder
boolean amplitudeScaledLineLength
double nominalSourceLevel
double nominalSpreading
double defaultLength
boolean timeScaledOpacity
long timeToFade
boolean showVesselBearings
int numberOfFavouriteWhales
boolean autoProcess
boolean zoomDifarFrequency
java.lang.String dataName
boolean enable
LookupItem speciesLookupItem
java.lang.String speciesName
int channelSelection
java.lang.String lookupItemName
float processFreqMin
float processFreqMax
float sampleRate
int FFTLength
int FFTHop
int nAngleSections
double difarGramIntensityScaleFactor
DifarParameters.DifarOutputTypes difarOutputType
boolean useMarkedBandsForSpectrogramClips
boolean useDetectionLimitsForTriggeredDetections
CalibrationHistogram trueBearingHistogram
CalibrationHistogram calCorrectionHistogram
CalibrationProcess calibrationProcess
HistogramDisplay trueBearingDisplay
HistogramDisplay calCorrectionDisplay
int channel
javax.swing.JButton saveButton
javax.swing.JButton stopButton
PamTextDisplay progressText
DifarControl difarControl
java.lang.Double draggedMouseValue
double minFreq
double maxFreq
double minAmplitude
double minLengthMillis
LookupList speciesList
boolean[] speciesEnabled
boolean[] channelEnabled
boolean crossBearings
int numChannels
double F_win
double Fn_acquire
double Zeta_acquire
double Fn_track
double Zeta_track
double Tint_15
double Tagc_75
double Tagc_15
double Tau_lock_75
double Tau_lock_15
double Lock_threshold_75
double Lock_hys_75
double Lock_threshold_15
double Lock_hys_15
java.lang.String dlpf
java.lang.String drip
java.lang.String tempDir
java.lang.String exePath
double[] dlpfVals
double[] dripVals
DifarControl difarControl
DifarParameters difarParameters
javax.swing.JCheckBox amplitudeScaledLineLength
javax.swing.JTextField defaultLength
javax.swing.JTextField sourceLevel
javax.swing.JTextField spreadingFactor
javax.swing.JCheckBox timeScaledOpacity
javax.swing.JTextField timeToFade
javax.swing.JCheckBox showVessels
DifarControl difarControl
DifarParameters difarParameters
SourcePanel rawDataSource
SourcePanel triggerSource
difar.dialogs.DifarParamsDialog.DifarVesselPanel vesselPanel
DifarParamsDialog.DifarDetectorPanel triggerPanel
javax.swing.JPanel automationPanel
difar.dialogs.DifarParamsDialog.AudioPanel[] audioPanels
javax.swing.JComboBox<E> demuxType
javax.swing.JTextField secondsToPreceed
javax.swing.JTextField keepRawDataTime
javax.swing.JTextField queuedDataKeepTime
javax.swing.JTextField processedDataKeepTime
javax.swing.JCheckBox clearQueueAtStart
javax.swing.JCheckBox clearProcessedDataAtStart
javax.swing.JComboBox<E>[] favSpecies
javax.swing.JComboBox<E> firstOrder
javax.swing.JComboBox<E> secondOrder
javax.swing.JCheckBox autoSaveDResult
javax.swing.JTextField autoSaveTime
javax.swing.JCheckBox autoSaveAngleOnly
javax.swing.JCheckBox autoProcess
java.lang.Object nullItem
java.lang.Object defaultItem
java.lang.Object noAutoItem
java.util.ArrayList<E> acousticDataBlocks
javax.swing.JLabel[] dataLabels
javax.swing.JCheckBox[] enableBoxes
javax.swing.JButton[] settingsButtons
DifarParameters.DifarTriggerParams[] triggerParams
javax.swing.JComboBox<E>[] speciesLookups
DifarControl difarControl
PamPanel controlPanel
javax.swing.JList<E> trackedGroup
PamButton addGroup
PamButton removeGroup
difar.display.DIFARGroupPanel.GroupNameDialog groupNameDialog
javax.swing.DefaultListModel<E> listModel
EchoProcessParameters echoProcessParameters
SourcePanel sourcePanel
javax.swing.JTextField duration
javax.swing.JTextField minEchoTime
javax.swing.JTextField maxEchoTime
javax.swing.JTextField threshold
int clickDetector
int minEchoTime
int maxEchoTime
int echoDuration
double threshold
int channelList
PamSymbol mapSymbol
EdgeParameters edgeParameters
javax.swing.JComboBox<E> sourceList
EnvelopeParams envelopeParams
SourcePanel sourcePanel
javax.swing.JCheckBox logOutput
javax.swing.JTextField outputSampleRate
javax.swing.JButton preFilterButton
javax.swing.JButton postFilterButton
javax.swing.JLabel preFilterText
javax.swing.JLabel postFilterText
float sampleRate
java.lang.String dataSourceName
int channelMap
float outputSampleRate
boolean logScale
FilterParams filterSelect
FilterParams postFilterParams
FFTFilterParams fftFilterParams
javax.swing.JRadioButton highPass
javax.swing.JRadioButton bandPass
javax.swing.JRadioButton lowPass
javax.swing.JRadioButton bandStop
javax.swing.JTextField lowPassFreq
javax.swing.JTextField highPassFreq
FilterBand filterBand
double lowPassFreq
double highPassFreq
int newVal
FFTLengthModeled host
java.lang.String name
int fftLength
int fftHop
int channelMap
int dataSource
java.lang.String dataSourceName
int windowFunction
boolean clickRemoval
double clickThreshold
int clickPower
SpectrogramNoiseSettings spectrogramNoiseSettings
FFTParameters fftParameters
SourcePanel sourcePanel
javax.swing.JTextField fftLengthData
javax.swing.JTextField fftHopData
javax.swing.JSpinner fftLengthSpinner
FFTLengthModel fftLengthModel
javax.swing.JComboBox<E> windowFunction
javax.swing.JButton defaultOverlap
javax.swing.JTabbedPane tabbedPane
javax.swing.JCheckBox clickRemoval
javax.swing.JTextField clickThreshold
javax.swing.JTextField clickPower
SpectrogramNoiseDialogPanel spectrogramNoiseDialogPanel
ResolutionPanel resolutionPanel
java.lang.String clickRemoveMessage
FFTDataDisplayOptions plotOptions
javax.swing.JTextField nameTextField
javax.swing.JPanel t
javax.swing.JPanel checkBoxPanel
javax.swing.JPanel p
javax.swing.JPanel valuesPanel
javax.swing.JTextField minValTextField
javax.swing.JTextField maxValTextField
javax.swing.JTextField smoothingFactorTextField
javax.swing.JCheckBox useSpecValues
FFTPluginPanelProvider.FFTPluginPanel pluginPanel
javax.swing.JCheckBox[] channelCheckBoxes
int[] usedChannelList
OfflineFileControl sensorControl
OfflineFileParams d3Params
SelectFolder selectFolder
PamDataBlock<Tunit extends PamDataUnit> outputDataBlock
SourcePanel sourcePanel
FilterDialogPanel filterDialogPanel
java.lang.String rawDataSource
int channelBitmap
FilterParams filterParams
FilterType filterType
FilterBand filterBand
int filterOrder
float lowPassFreq
float highPassFreq
double centreFreq
double passBandRipple
double stopBandRipple
double chebyGamma
int scaleType
java.io.File lastImportFile
double[] arbFreqs
double[] arbGains
PamTableDefinition tableDef
PamTableItem countItem
PamTableItem timeItem
PamTableItem prevIndex
PamTableItem[] colItem
generalDatabase.DatabaseSpeedDialog.SpeedWorker speedWorker
javax.swing.JTextField lastTime
javax.swing.JTextField nWrites
javax.swing.JTextField lastIndex
DBParameters dbParameters
DBControl dbControl
javax.swing.JComboBox<E> systemList
SystemDialogPanel systemDialogPanel
javax.swing.JPanel dialogBottomPanel
javax.swing.JTable dataTable
javax.swing.JLabel filterClause
EmptyTableDefinition tableDefinition
generalDatabase.dataExport.DataExportDialog.ExportTableModel tableModel
PamCursor tableCursor
boolean cancelled
int tableCursorRows
DataExportSystem exportSystem
java.util.ArrayList<E> visibleTableItems
java.util.ArrayList<E> dataFilters
javax.swing.JCheckBox useMin
javax.swing.JCheckBox useMax
javax.swing.JTextField minValue
javax.swing.JTextField maxValue
ValueFilterParams valueFilterParams
LookUpTables lookUpTables
javax.swing.JTable lutTable
generalDatabase.lookupTables.LookupEditDialog.LUTTableDataModel lutTableDataModel
javax.swing.JButton addButton
javax.swing.JButton deleteButton
javax.swing.JButton upButton
javax.swing.JButton downButton
LookupList lookupList
java.lang.String[] colNames
int databaseId
int order
java.lang.String topic
java.lang.String code
java.lang.String text
boolean selectable
java.awt.Color borderColour
java.awt.Color fillColour
java.lang.String symbolType
int resultSetRow
double speed
boolean dataOk
double courseOverGround
java.lang.Double trueHeading
java.lang.Double magneticHeading
java.lang.Double magneticVariation
java.lang.Double pitch
java.lang.Double roll
int time
int date
int day
int month
int year
int hours
int mins
int secs
int millis
long timeInMillis
java.util.Calendar gpsCalendar
GpsData lastGpsData
double distanceFromLast
boolean setClockOnStartup
java.lang.String nmeaSource
double dimA
double dimB
double dimC
double dimD
boolean plotPredictedPosition
int predictionTime
boolean readHeading
java.lang.String headingNMEASource
int mainString
java.lang.String rmcInitials
java.lang.String ggaInitials
boolean readTrueHeading
java.lang.String headingString
int headingStringPos
boolean headingSmoothing
float smoothingTime
int readType
int readInterval
double courseInterval
double speedInterval
GPSParameters gpsParameters
ShipDimensionsPanel shipDrawing
GPS.GPSParametersDialog.PredictPanel predictPanel
GPS.GPSParametersDialog.MainStringPanel mainStringPanel
ShipDimensionsFields shipDimensionsFields
SourcePanel sourcePanel
GPS.GPSParametersDialog.ReadOptions readOptions
GPS.GPSParametersDialog.HeadingPanel headingPanel
ImportGPSParams params
java.awt.Window frame
ImportGPSData importGPSData
javax.swing.JTextField year
javax.swing.JTextField month
javax.swing.JTextField day
javax.swing.JCheckBox checkBox
javax.swing.JComboBox<E> fileList
javax.swing.JButton browseButton
ImportGPSParams params
java.awt.Window frame
ImportGPSData importGPSData
javax.swing.JTextField pcTime
javax.swing.JTextField gpsTime
javax.swing.JButton setButton
javax.swing.JButton cancelButton
javax.swing.JCheckBox setAlways
GPSControl gpsControl
boolean setOnNextString
java.util.Calendar nmeaCalendar
boolean autoUpdate
int newDataCount
javax.swing.Timer timer
IMUParams params
javax.swing.JTextField heading
javax.swing.JTextField pitch
javax.swing.JTextField tilt
java.awt.Window frame
IMUParams imuParams
IMUControl imuControl
IMUImportMananger importCSVMethod
javax.swing.JButton importCSVB
javax.swing.JComboBox<E> comboBox
IpiProcessParameters ipiProcessParameters
SourcePanel sourcePanel
javax.swing.JTextField duration
javax.swing.JTextField minIpiTime
javax.swing.JTextField maxIpiTime
javax.swing.JTextField peakWidthPercent
javax.swing.JTextField outputFileName
java.lang.String ipiFunctionType
double ipiDuration
int channel
int echoDataBlock
double minIpiTime
double maxIpiTime
double ipiPeakWidthPercent
java.lang.String outputFileName
javax.swing.JTextArea displayArea
int NUMPHONES
int PHONEDIM
int NUMCMNDS
int NUMFIELDS
java.lang.String serverIP
int command
int ni
int i
int j
int n
int numphones
int phonedim
float start
float end
float lofreq
float hifreq
java.lang.String input
float[][] phonelocs
int quality
float speed
java.lang.String method
java.lang.String tag_cert
float angle
int ambig
int bearoffset
int locdim
float xpos
float ypos
float zpos
int posoffset
java.lang.String datestr
java.lang.String timestr
java.lang.String word
java.lang.String key
java.lang.String[] field
boolean GPS
boolean showlocflag
boolean Pamdiscflag
java.net.Socket PamSock
java.net.SocketAddress sockaddr
java.io.InputStream in
java.io.OutputStream out
java.io.PrintWriter pout
java.io.InputStreamReader isr
java.io.BufferedReader bin
java.lang.String[] cmndlist
IshDetParams ishDetParams
SourcePanel sourcePanel
javax.swing.JTextField vsData
javax.swing.JTextField threshData
javax.swing.JTextField minTimeData
javax.swing.JTextField refractoryTimeData
IshLocParams ishLocParams
SourcePanel sourcePanel
javax.swing.JTextField tBeforeData
javax.swing.JTextField tAfterData
javax.swing.JCheckBox detectorCheckBox
javax.swing.JButton okButton
javax.swing.JButton cancelButton
SourcePanel sourcePanel
LandmarkControl landmarkControl
LandmarkData landmarkData
LatLongDialogStrip latStrip
LatLongDialogStrip longStrip
javax.swing.JTextField name
javax.swing.JTextField height
PamSymbolSelector pamSymbolSelector
LandmarkControl landmarkControl
LandmarkDatas landmarkDatas
java.awt.Window parentFrame
javax.swing.JTable table
landMarks.LandmarksDialog.LandmarkDataModel landmarkDataModel
javax.swing.JButton deleteButton
javax.swing.JButton addButton
javax.swing.JButton editbutton
javax.swing.JTextField tableName
javax.swing.JButton dbImport
PamAxis northAxis
PamAxis southAxis
PamAxis westAxis
PamAxis eastAxis
int minNorth
int minSouth
int minEast
int minWest
javax.swing.border.Border border
javax.swing.JLabel titleLabel
javax.swing.JPanel innerPanel
javax.swing.JComponent plotPanel
javax.swing.JComponent leftPlotPanel
javax.swing.JComponent rightPlotPanel
boolean dualDisplay
boolean autoInsets
javax.swing.JPanel axisPanel
javax.swing.JPanel plotPanel
javax.swing.JPanel leftPlotPanel
javax.swing.JPanel rightPlotPanel
javax.swing.border.EmptyBorder emptyBorder
java.awt.Dimension lastSize
PamFramePlots framePlots
SourcePanel sourcePanel
LevelMeterControl levelMeterControl
LevelMeterParams levelMeterParams
double minBandwidthHz
double maxBandwidthHz
float samplingRateHz
int numberChannels
double voltageRange
double preampGainDb
java.lang.String sourceName
int sourceNumber
boolean showCheckbox
javax.swing.JCheckBox checkBox
CheckRenderer.TreeLabel label
javax.swing.tree.TreeModel model
java.lang.String nodeName
java.lang.String associatedSignalBandIdentifier
java.lang.String identifier
double startFrequencyHz
double endFrequencyHz
double backgroundSeconds
double signalSeconds
double[] frequencyLimits
double[] secondsLimits
java.util.ArrayList<E> targetConfigurations
int selectedChannels
AcquisitionSettings acquisitionSettings
ConfigurationDialogSettings configurationDialogSettings
boolean accepted
LikelihoodDetectionParameters likelihoodParameters
SourcePanel sourcePanel
TreeTableModel treeTableModel
TreeTable treeTable
double[] overlap
int fftSize
int fftHop
int channelMap
int sourceNumber
int[] numberAverages
double actualTimeResolution
double actualFreqResolution
java.util.ArrayList<E> existingIdentifiers
javax.swing.JButton okButton
javax.swing.JButton cancelButton
javax.swing.JPanel mainPanel
javax.swing.JLabel message
boolean accepted
javax.swing.JTextField identifierField
NewBandNameDialog.BandType bandType
java.lang.String identifier
double inBandThresholdDb
double guardBandThresholdDb
double startFrequencyHz
double endFrequencyHz
double backgroundSeconds
double signalSeconds
double[] inBandThresholdLimits
double[] guardBandThresholdLimits
double[] frequencyLimits
double[] secondsLimits
TargetConfiguration.State state
double referenceGain
double timeResolution
double frequencyResolution
double secondsBetweenDetections
NormalizerProcess.NormalizerAlgorithm algorithm
int channelMap
double[] timeResolutionLimits
double[] frequencyResolutionLimits
double[] secondsBetweenDetectionsLimits
java.util.ArrayList<E> signalBands
java.util.ArrayList<E> guardBands
java.lang.String identifier
AcquisitionSettings acquisitionSettings
LikelihoodFFTParameters fftParameters
java.util.ArrayList<E> existingIdentifiers
javax.swing.JButton okButton
javax.swing.JButton cancelButton
javax.swing.JPanel mainPanel
javax.swing.JLabel message
boolean accepted
javax.swing.JTextField identifierField
TreeTable.TreeTableCellRenderer tree
TreeTableModelAdapter model
TreeTableModelAdapter
TreeTable.TreeTableCellEditor treeTableCellEditor
javax.swing.JPopupMenu popupMenu
javax.swing.text.NumberFormatter numberFormatter
javax.swing.JTree tree
TreeTableModel treeTableModel
ListeningParameters listeningParameters
listening.ListeningDialog.LTableData tableData
javax.swing.JTable table
ListeningControl listeningControl
javax.swing.JButton addButton
javax.swing.JButton removeButton
javax.swing.JButton editButton
javax.swing.JButton upButton
javax.swing.JButton downButton
java.lang.String name
PamSymbol symbol
TowedArray3DProcessParameters towedArray3DProcessParameters
SourcePanel sourcePanel
javax.swing.JComboBox<E> alglist
javax.swing.JTextField minIciNum
javax.swing.JTextField maxTimeDelay
javax.swing.JTextField maxTimeQueue
javax.swing.JTextField percentErrorAngle
javax.swing.JTextField percentErrorEchoTime
javax.swing.JCheckBox fine_tune_tdd_checkbox
javax.swing.JCheckBox fine_tune_tds_checkbox
javax.swing.JCheckBox yes_checkbox
TowedArray3DController towedArray3DController
int detectorDataBlock
int algchoice
int minICINum
long maxTimeDelay
long maxTimeQueue
int channelList
long percentErrorAngle
long percentICIMatchError
boolean fine_tune_tdd
boolean fine_tune_tds
boolean yes_process
boolean filterBearings
FFTFilterParams delayFilterParams
boolean envelopeBearings
DelayOptionsPanel delayOptionsPanel
DelayMeasurementParams delayMeasurementParams
javax.swing.JPanel mainPanel
LikelihoodSurfaceDialog likilihoodSurface
LikelihoodSurfaceParams likilihoodSurfaceParams
javax.swing.JComboBox<E> colourList
javax.swing.JTextField maxChi2
javax.swing.JTextField gridMeshSize
javax.swing.JTextField gridRange
ColourArray.ColourArrayType colourMap
boolean is3D
float maxChiValue
float gridRange
float gridMeshSize
int dim
double timeError
double jumpSize
boolean cylindricalCoOrdinates
java.lang.Integer numberOfJumps
double ChainStartDispersion
java.lang.Integer numberOfChains
int chainAnalysis
double percentageToIgnore
int clusterAnalysis
java.lang.Integer nKMeans
double maxClusterSize
MCMCParams mCMCParameters
javax.swing.JTextField Error
javax.swing.JTextField jumpSize
javax.swing.JTextField numberOfJumps
javax.swing.JTextField numberOfChains
javax.swing.JTextField ChainStartDispersion
javax.swing.JCheckBox cylindricalCoOrdinates
javax.swing.JRadioButton percentageButton
javax.swing.JTextField percentage
javax.swing.JRadioButton kMeansClustering
javax.swing.JTextField nClusters
javax.swing.JTextField minDistance
javax.swing.JRadioButton noClustering
PamPanel mainPanel
PamPanel mCMCPropPanel
javax.swing.JPanel hMPanel
javax.swing.JComboBox<E> models
javax.swing.JPanel hydrophoneModels
java.util.ArrayList<E> modelList
PamPanel currentModelPanel
MCMCHM mCMCHM
Vert3DParams vert3DParams
FormDescription formDescription
LoggerForm loggerForm
FormsDataUnit formDataUnit
FormsControl formsControl
java.util.ArrayList<E> optionsPanels
boolean answer
LoggerForm loggerForm
FormDescription formDescription
PamColors.PamColor defaultColor
PamColors.PamColor defaultColor
FormsControl formsControl
LoggerForm loggerForm
FormEditor formEditor
FormDescription formDescription
EditControlPanel editControlPanel
EditPropertyPanel editPropertyPanel
ControlTitle selectedTitle
javax.swing.JButton previewButton
boolean formCancelled
LoggerForm loggerForm
LtsaParameters ltsaParameters
SourcePanel sourcePanel
javax.swing.JTextField interval
LtsaControl ltsaControl
Map.DisplayPanZoom.PanZoomMouseAdapter mouseAdapter
PanZoomBehaviour handler
javax.swing.JButton upLeft
javax.swing.JButton up
javax.swing.JButton upRight
javax.swing.JButton left
javax.swing.JButton right
javax.swing.JButton downLeft
javax.swing.JButton down
javax.swing.JButton downRight
javax.swing.JButton zoomIn
javax.swing.JButton zoomOut
javax.swing.JButton headUp
javax.swing.JButton northUp
javax.swing.JButton centreOnShip
javax.swing.JButton rotateClockwise
javax.swing.JButton rotateAntiClockwise
javax.swing.JButton panWithMouse
javax.swing.JButton measureWithMouse
LatLong lastMouseLatLong
double mouseX
double mouseY
MapController mapController
SimpleMap simpleMap
Map.GpsTextDisplay.GpsTextAreaLabel latitude
Map.GpsTextDisplay.GpsTextAreaLabel longitude
Map.GpsTextDisplay.GpsTextAreaLabel time
Map.GpsTextDisplay.GpsTextAreaLabel date
Map.GpsTextDisplay.GpsTextAreaLabel course
Map.GpsTextDisplay.GpsTextAreaLabel heading
Map.GpsTextDisplay.GpsTextAreaLabel speed
Map.GpsTextDisplay.GpsTextAreaLabel cursorLat
Map.GpsTextDisplay.GpsTextAreaLabel cursorLong
Map.GpsTextDisplay.GpsTextAreaLabel cursorRange
Map.GpsTextDisplay.GpsTextAreaLabel cursorBearing
Map.GpsTextDisplay.GpsTextAreaLabel magneticDeviation
java.awt.Color labelColor
Map.GpsTextDisplay.GpsTextAreaLabel cursorReference
Map.GpsTextDisplay.GpsTextAreaLabel lastFixTime
Map.GpsTextDisplay.TextAreaPanel gpsPanel
Map.GpsTextDisplay.TextAreaPanel cursorPanel
Map.GpsTextDisplay.GpsTextAreaLabel headingLabel
MapComment mapComment
MapPanel mapPanel
java.awt.Point mapPoint
javax.swing.JLabel dateLabel
javax.swing.JLabel latLongLabel
javax.swing.JTextArea textArea
MapDetectionsManager mapDetectionsManager
MapDetectionsParameters mapDetectionsParameters
javax.swing.JCheckBox[] plotCheckBox
javax.swing.JTextField[] showTimes
javax.swing.JButton[] defaults
javax.swing.JCheckBox[] allAvailable
javax.swing.JButton[] options
javax.swing.JPopupMenu detectorMenu
javax.swing.JPopupMenu plotDetectorMenu
double mapRotationDegrees
MapRectProjector rectProj
LatLong mapCentreDegrees
int mapRangeMetres
TransformUtilities trans
double pixelsPerMetre
Vessel ship
Compass myCompass
StraightLineGrid grid
java.awt.event.MouseAdapter popupListener
java.awt.event.MouseAdapter detectorPopupListener
MapController mapController
MapContourGraphics mapContourGraphics
SimpleMap simpleMapRef
Coordinate3d[] arraygeom
Coordinate3d[] arrayPanelOffsets
Coordinate3d[] arrayPanelPositions
java.awt.geom.AffineTransform baseXform
boolean repaintBase
PamArray lastArray
LatLong lastMapCentreDegrees
int lastMapRangeMetres
double lastMapRotationDegrees
int lastHeight
int lastWidth
java.awt.image.BufferedImage baseDrawing
int imageWidth
int imageHeight
PamSymbol measureSymbol
boolean[] wantedContours
java.awt.Color[] contourColours
int[] contourDepths
GpsDataUnit lastDrawGpsDataUnit
Coordinate3d lastGpsCoodinate
javax.swing.JCheckBoxMenuItem panZoomMenu
javax.swing.JCheckBoxMenuItem showGpsMenu
javax.swing.JCheckBoxMenuItem showKeyMenu
int trackShowTime
int dataKeepTime
int dataShowTime
boolean viewerShowAll
boolean showHydrophones
boolean keepShipOnMap
java.io.File mapFile
boolean[] mapContours
boolean showKey
boolean showPanZoom
boolean showGpsData
boolean colourHydrophonesByChannel
int symbolSize
int mapRangeMetres
javax.swing.JTextField trackShowtime
javax.swing.JTextField dataKeepTime
javax.swing.JTextField dataShowTime
javax.swing.SpinnerNumberModel symbolSize
Map.MapParametersDialog.FilePanel filePanel
Map.MapParametersDialog.HydrophonePanel hydrophonePanel
javax.swing.JCheckBox hydroCheckBox
javax.swing.JCheckBox colourByChannel
javax.swing.JCheckBox keepShip
MapFileManager mapFileManager
javax.swing.JSpinner symbolSizeSpinner
Map.SimpleMap.MapMouseMotionAdapter mouseMotion
Map.SimpleMap.MapMouseInputAdapter mouseInput
Map.SimpleMap.MouseWheelHandler mouseWheel
boolean centerOnFirstShipGPS
java.util.ArrayList<E> dataBlocks
double shipRotTest
PamDataBlock<Tunit extends PamDataUnit> gpsDataBlock
MapPanel mapPanel
GpsTextDisplay gpsTextPanel
DisplayPanZoom panZoom
javax.swing.JPanel viewerControls
MouseMeasureDisplay mouseMeasureDisplay
PamZoomOnMapPanel panZoomOnMap
javax.swing.JPanel controlContiner
ClipboardCopier clipboardCopier
MapController mapController
boolean mouseDragging
PamDataUnit mousedDataUnit
LatLong lastClickedMouseLatLong
boolean mouseReleased
boolean mapCanScroll
Coordinate3d newCursorPos
Coordinate3d oldCursorPos
Coordinate3d diffCursorPos
java.awt.Point mouseDownPoint
java.awt.Point mouseDragPoint
PamScrollSlider viewerScroller
boolean isMainTab
MapParameters mapParameters
int thisMapIndex
MapFileManager mapFileManager
MapDetectionsManager mapDetectionsManager
boolean initialisationComplete
javax.swing.JRadioButton viewerShowAll
javax.swing.JRadioButton viewerShowSelection
HiddenSlider hiddenSlider
java.lang.Integer hiddenSliderTime
double vesselLength
double vesselWidth
double dimA
double dimB
double dimC
double dimD
int predictionArrow
double vesselLengthWidthRatio
java.awt.Color vesselColor
Coordinate3d[] shipOutline
Coordinate3d[] shipPolygon
LatLong[] shipPolygonLatLog
GpsData shipGps
Coordinate3d centreOfRotation
Coordinate3d gpsReceiverPosition
LatLong shipLocation
Coordinate3d shipPosition
double shipIconLength
double pixelsPerMetre
NetworkEmulator networkEmulator
networkTransfer.emulator.EmulateDialog.StatusPanel statusPanel
EmulatorParams emulatorParams
javax.swing.JSpinner nBuoys
javax.swing.SpinnerNumberModel buoyNumberModel
javax.swing.JLabel latLong
javax.swing.JTextField circleRadius
java.util.ArrayList<E> usedDataBlocks
java.util.ArrayList<E> dataCheckBoxes
javax.swing.JButton startButton
javax.swing.JButton stopButton
javax.swing.Timer tableTimer
NetworkObjectPacker networkObjectPacker
javax.swing.JTextField statusInterval
LatLong gpsCentre
double circleRadius
int nBuoys
int firstBuoyId
int statusIntervalSeconds
boolean[] usedBlocks
NetworkReceiver networkReceiver
double[] standardError
GpsData referencePoint
NetworkReceiver networkReceiver
NetworkReceiveParams networkReceiveParams
javax.swing.JTextField receivePort
javax.swing.JRadioButton channelsRenumber
javax.swing.JRadioButton channelsMaintain
javax.swing.JTextField compassOffset
NetworkSendParams networkSendParams
javax.swing.JTextField ipAddress
javax.swing.JTextField portNumber
javax.swing.JTextField userName
javax.swing.JPasswordField password
javax.swing.JCheckBox rememberPassword
javax.swing.JButton testConnection
NetworkSender networkSender
networkTransfer.send.NetworkSendDialog.DataPanel dataPanel
networkTransfer.send.NetworkSendDialog.QueuePanel queuePanel
javax.swing.JTabbedPane tabbedPane
java.lang.String ipAddress
int portNumber
java.lang.String password
java.lang.String userId
int stationId1
int stationId2
boolean savePassword
int maxQueuedObjects
int maxQueueSize
java.util.ArrayList<E> selectedDataBlocks
public void readExternal(java.io.ObjectInput arg0) throws java.io.IOException, java.lang.ClassNotFoundException
java.io.IOException
java.lang.ClassNotFoundException
public void writeExternal(java.io.ObjectOutput arg0) throws java.io.IOException
java.io.IOException
java.lang.String name
int port
int channelMap
boolean simThread
double simStartLatitude
double simStartLongitude
double simStartHeading
double simStartSpeed
double simTimeInterval
double drunkenness
int latLongDecimalPlaces
boolean generateAIS
java.lang.String serialPortName
int serialPortBitsPerSecond
java.lang.String nmeaSource
int simHeadingData
NMEAParameters.NmeaSources sourceType
NMEAParameters nmeaParameters
javax.swing.JTextField portTextField
javax.swing.ButtonGroup gpsRadioGroup
javax.swing.JRadioButton udpNmeaGpsRadio
javax.swing.JRadioButton serialNmeaGpsRadio
javax.swing.JRadioButton simNmeaGpsRadio
javax.swing.JLabel portSettingsLabel
int[] bitsPerSecondList
javax.swing.JComboBox<E> portComboBox
javax.swing.JComboBox<E> bitsPerSecondComboBox
javax.swing.JPanel udpPortSelection
javax.swing.JPanel serialPortSelection
javax.swing.JPanel simulatedPortSettings
NMEAParameters nmeaParameters
LatLongDialogStrip latStrip
LatLongDialogStrip longStrip
javax.swing.JTextField speed
javax.swing.JTextField course
javax.swing.JTextField drunkenness
javax.swing.JTextField timeInterval
javax.swing.JTextField decPlaces
javax.swing.JCheckBox simAIS
javax.swing.JRadioButton[] headingButtons
java.lang.String[] headingStrings
NMEAFrontEnd nmeaFrontEnd
InfoPanel infoPanel
javax.swing.JButton startButton
javax.swing.JButton stopButton
javax.swing.JButton closeButton
NMEAEmulatorParams params
javax.swing.JCheckBox useAll
javax.swing.JCheckBox repeat
javax.swing.JTextField startTime
javax.swing.JTextField endTime
NoiseBandSettings noiseBandSettings
NoiseBandControl noiseBandControl
noiseBandMonitor.NoiseBandDialog.BodePlotAxis bodePlotAxis
noiseBandMonitor.NoiseBandDialog.BodePlotGraph bodePlotGraph
javax.swing.JCheckBox logFreqScale
javax.swing.JCheckBox showGrid
javax.swing.JCheckBox showDecimators
javax.swing.JCheckBox[] showStandard
SourcePanel sourcePanel
PamDataBlock<Tunit extends PamDataUnit> rawDatablock
javax.swing.JTextField topOctave
javax.swing.JTextField bottomOctave
javax.swing.JComboBox<E> bandType
javax.swing.SpinnerNumberModel topBandSpinner
javax.swing.SpinnerNumberModel filterOrder
javax.swing.JTextField filterGamma
javax.swing.SpinnerNumberModel nDecimators
javax.swing.JComboBox<E> filterType
FilterPropertyTable filterPropertyTable
javax.swing.JTextField outputInterval
boolean setupComplete
java.util.ArrayList<E> decimationFilters
java.util.ArrayList<E> bandFilters
int[] decimatorIndexes
BandData bandData
double[] axisGains
BandAnalyser bandAnalyser
int selectedBand
int selectedDecimator
java.lang.String rawDataSource
int channelMap
int startDecimation
int endDecimation
BandType bandType
FilterType filterType
int iirOrder
int firOrder
double firGamma
int lowBandNumber
int highBandNumber
int outputIntervalSeconds
boolean logFreqScale
boolean showGrid
boolean showDecimators
boolean[] showStandard
int scaleToggleState
NoiseSettings noiseSettings
SourcePanel sourcePanel
java.lang.String[] colNames
noiseMonitor.NoiseDialog.NoiseTableData noiseTableData
javax.swing.JTable noiseTable
javax.swing.JTextField interval
javax.swing.JTextField nMeasures
javax.swing.JButton removeButton
javax.swing.JButton editButton
javax.swing.JCheckBox thirdsButton
javax.swing.JButton othersButton
javax.swing.JCheckBox useAllButton
ResolutionPanel resolutionPanel
NoiseControl noiseControl
NoiseDisplaySettings noiseSettings
javax.swing.JTextField maxLevel
javax.swing.JTextField minLevel
javax.swing.JCheckBox autoLevel
javax.swing.JCheckBox showGrid
javax.swing.JCheckBox showKey
long displayLengthSeconds
double levelMin
double levelMax
boolean[] selectedChannels
int selectedStats
boolean[] selectedData
boolean autoScale
boolean showGrid
boolean showKey
int bandOption
java.lang.String dataSource
int channelBitmap
int measurementIntervalSeconds
int nMeasures
boolean useAll
Overrides nMeasures.
java.util.ArrayList<E> measurementBands
double lowestFrequency
double highestFrequency
NoiseMeasurementBand noiseMeasurementBand
FFTDataBlock sourceDataBlock
javax.swing.JTextField name
javax.swing.JTextField startFreq
javax.swing.JTextField endFreq
ResolutionPanel resolutionPanel
NoiseAlarmParameters noiseAlarmParameters
NoiseDataBlock noiseDataBlock
javax.swing.JCheckBox[] bandCheckBoxes
javax.swing.JPanel bandPanel
javax.swing.JRadioButton[] statsButtons
OneBandControl oneBandControl
OneBandParameters params
FilterDialogPanel filterDialogPanel
SourcePanel sourcePanel
javax.swing.JTextField measurementInterval
javax.swing.JTextField integrationTime
javax.swing.JCheckBox detectPulses
javax.swing.JTextField singlePulseThreshold
javax.swing.JTextField maxPulseLength
OneBandControl dbhtControl
OneBandDisplayParams params
javax.swing.JCheckBox autoScale
javax.swing.JTextField minAmp
javax.swing.JTextField maxAmp
javax.swing.JCheckBox showGrid
javax.swing.JCheckBox drawLines
javax.swing.JCheckBox colourByChannel
javax.swing.JTextField symbolSize
javax.swing.JCheckBox[] showMeasure
java.lang.String dataSource
int measurementInterval
int selIntegrationTime
int channelMap
FilterParams filterParams
boolean detectPulses
double singlePulseThreshold
double maxPulseLength
OneBandAlarmParameters oneBandAlarmParameters
javax.swing.JRadioButton[] measures
OneBandAlarmCounter oneBandAlarmCounter
OneBandSummaryParams oneBandSummaryParams
javax.swing.JTextField exportInterval
OfflineTaskGroup taskGroup
javax.swing.JComboBox<E> dataSelection
javax.swing.JCheckBox[] taskCheckBox
javax.swing.JButton[] settingsButton
javax.swing.JLabel status
javax.swing.JLabel currFile
javax.swing.JProgressBar globalProgress
javax.swing.JProgressBar fileProgress
javax.swing.JCheckBox deleteOldData
javax.swing.JLabel dataInfo
PamPanel dateSelectionPanel
javax.swing.JTextField startTime
javax.swing.JTextField endTime
PamPanel selectDataPanel
int currentStatus
long lastDataTime
long startRedoDataTime
Start time used for one off re-processing jobs
long endRedoDataTime
End time used for one off re-processing jobs
int dataChoice
boolean deleteOld
boolean[] taskSelection
java.lang.String newName
javax.swing.JLabel label
javax.swing.JTextField nameField
java.lang.String currentName
PamModuleInfo moduleInfo
long viewStartTime
long viewEndTime
boolean useAnalysisTime
long analStartTime
long analEndTime
boolean[] useModules
SettingsFileData settingsFileData
javax.swing.JComboBox<E> fileList
javax.swing.JButton browseButton
javax.swing.JButton newButton
javax.swing.JCheckBox alwaysShow
StorageParameters storageParameters
javax.swing.JPanel mainPanel
java.util.ArrayList<E> dataBlocks
java.util.ArrayList<E> usedDataBlocks
java.util.ArrayList<E> dbCheckBoxes
java.util.ArrayList<E> bsCheckBoxes
javax.media.j3d.BranchGroup rootGroup
javax.media.j3d.TransformGroup rotateGroup
javax.media.j3d.BranchGroup graphicsGroup
javax.media.j3d.BranchGroup graphGroup
AxisVisualisation axisVis
com.sun.j3d.utils.behaviors.mouse.MouseRotate myMouseRotate
javax.media.j3d.BranchGroup myMouseRotateG
com.sun.j3d.utils.behaviors.mouse.MouseWheelZoom myMouseZoom
javax.media.j3d.BranchGroup myMouseZoomG
com.sun.j3d.utils.behaviors.mouse.MouseTranslate myMouseTranslate
javax.media.j3d.BranchGroup myMouseTranslateG
MouseProportionalZoom myMouseProportionalZoom
PamPanel3D.PamCanvas3D canvas
com.sun.j3d.utils.picking.PickCanvas pickCanvas
javax.media.j3d.View view
com.sun.j3d.utils.universe.ViewInfo viewInfo
com.sun.j3d.utils.universe.ViewingPlatform vip
java.awt.GraphicsConfiguration config
javax.media.j3d.GraphicsConfigTemplate3D template
com.sun.j3d.utils.universe.SimpleUniverse u
javax.media.j3d.BoundingSphere bounds
java.awt.Frame frame
javax.media.j3d.Background background
javax.media.j3d.BranchGroup light
boolean pickable
boolean aspectRatio
boolean offscreen
javax.vecmath.Color3f red
javax.vecmath.Color3f blue
javax.vecmath.Color3f green
javax.vecmath.Color3f black
javax.vecmath.Color3f white
javax.vecmath.Color3f grey
PamGraph3D.PamPanel3D.OffScreenCanvas offScreenCanvas3D
int destWidth
int destHeight
javax.media.j3d.BranchGroup rootGroup
javax.media.j3d.TransformGroup rotateGroup
javax.media.j3d.BranchGroup spectrogramGroup
javax.media.j3d.BranchGroup graphGroup
javax.media.j3d.BranchGroup spectro2D
javax.media.j3d.BranchGroup spectro3D
ColourArray.ColourArrayType colour
com.sun.j3d.utils.behaviors.mouse.MouseRotate myMouseRotate
javax.media.j3d.BranchGroup myMouseRotateG
com.sun.j3d.utils.behaviors.mouse.MouseWheelZoom myMouseZoom
com.sun.j3d.utils.behaviors.mouse.MouseTranslate myMouseTranslate
MouseProportionalZoom myMouseProportionalZoom
MouseRightClickMenu myMouseMenuRightClick
javax.media.j3d.Canvas3D canvas
javax.media.j3d.View view
com.sun.j3d.utils.universe.ViewInfo viewInfo
com.sun.j3d.utils.universe.ViewingPlatform vip
java.awt.GraphicsConfiguration config
javax.media.j3d.GraphicsConfigTemplate3D template
com.sun.j3d.utils.universe.SimpleUniverse u
javax.media.j3d.BoundingSphere bounds
java.awt.Frame frame
javax.vecmath.Color3f red
javax.vecmath.Color3f blue
javax.vecmath.Color3f green
javax.vecmath.Color3f black
javax.vecmath.Color3f white
javax.vecmath.Color3f grey
PamRawDataBlock rawDataBlock
long startSample
int duration
int dataCause
DataSelector dataSelector
boolean cancelled
PamModelSettings pamModelSettings
javax.swing.JCheckBox multiThreading
javax.swing.JTextField jitterMillis
javax.swing.JTextArea infoArea
PamScrollerData scrollerData
javax.swing.JTextField startTime
javax.swing.JTextField duration
javax.swing.JTextField stepSize
long minDuration
long maxDuration
long dataMinTime
long dataMaxTime
long dataMaxDuration
long currentDuration
javax.swing.JButton durationButton
AbstractScrollManager scrollManager
long[] standardLoadTimes
javax.swing.JPanel panel
javax.swing.JScrollBar scrollBar
PamPanel timePanel
PamLabel startLabel
PamLabel endLabel
javax.swing.JPanel controlPanel
java.lang.String name
long minimumMillis
long maximumMillis
int stepSizeMillis
int pageStep
long defaultLoadtime
double latitude
double longitude
double height
i.e. height is ALWAYS the distance up from the sea surface, so real depth values will always be a negative height.
javax.swing.JRadioButton decimalMinutes
javax.swing.JRadioButton minutesSeconds
LatLongDialogStrip latStrip
LatLongDialogStrip longStrip
javax.swing.JLabel formattedText
javax.swing.JTextField degrees
javax.swing.JTextField minutes
javax.swing.JTextField seconds
javax.swing.JTextField decminutes
javax.swing.JLabel dl
javax.swing.JLabel ml
javax.swing.JLabel sl
javax.swing.JLabel dml
javax.swing.JComboBox<E> nsew
boolean isLatitude
javax.swing.ImageIcon[] images
int height
int width
java.lang.String[] colourStrings
ColourArray.ColourArrayType[] types
javax.swing.JComboBox<E> colourBox
ScrollableBufferedImage bufferedImage
int extraWest
int extraNorth
int extraSouth
int extraEast
java.awt.Font DEFAULT_FONT
int dialogResultValue
java.lang.String[] fontStyleNames
java.lang.String[] fontFamilyNames
java.lang.String[] fontSizeStrings
javax.swing.JTextField fontFamilyTextField
javax.swing.JTextField fontStyleTextField
javax.swing.JTextField fontSizeTextField
javax.swing.JList<E> fontNameList
javax.swing.JList<E> fontStyleList
javax.swing.JList<E> fontSizeList
javax.swing.JPanel fontNamePanel
javax.swing.JPanel fontStylePanel
javax.swing.JPanel fontSizePanel
javax.swing.JPanel samplePanel
javax.swing.JTextField sampleText
KeyPanel keyPanel
CornerLayout cornerLayout
CornerLayoutContraint gc
PamDataBlock<Tunit extends PamDataUnit> dataBlock
javax.swing.JButton closeButton
javax.swing.JPanel observerPanel
javax.swing.JPanel titlePanel
java.awt.GridBagLayout gridLayout
java.awt.GridBagConstraints constraints
javax.swing.JLabel[] cpuLabels
javax.swing.Timer t
PamColors.PamColor defaultColor
PamColors.PamColor defaultColor
PamColors.PamColor defaultColor
javax.swing.JButton okButton
javax.swing.JButton cancelButton
javax.swing.JButton defaultButton
javax.swing.JButton helpButton
javax.swing.JPanel contentPane
java.lang.String helpPoint
javax.swing.JPanel buttonPanel
boolean smruDev
ClipboardCopier clipboardCopier
boolean sendGeneralSettingsNotification
java.lang.String warningTitle
boolean warnDefaultSetting
CancelObserver cancelObserver
PamColors.PamColor defaultColor
java.awt.Color[] preferredBorderColours
PamColors.PamColor defaultColor
PamColors.PamColor defaultColor
PamColors.PamColor defaultColor
PamColors.PamColor defaultColor
PamColors.PamColor defaultColor
int iconStyle
int symbol
int width
int height
float lineThickness
boolean fill
java.awt.Color fillColor
java.awt.Color lineColor
int iconHorizontalAlignment
int iconVerticalAlignment
javax.swing.JPanel samplePanel
javax.swing.JButton symbolButton
javax.swing.JCheckBox fillCheckBox
javax.swing.JColorChooser fillColorChooser
javax.swing.JColorChooser lineColorChooser
PamView.PamSymbolDialog.ColorListener colorListener
javax.swing.JSpinner lineThickness
javax.swing.JSpinner symbolHeight
javax.swing.JSpinner symbolWidth
PamSymbol givenSymbol
PamSymbol returnedSymbol
javax.swing.JButton changeButton
PamView.PamSymbolSelector.SymbolPanel symbolPanel
PamSymbol currentSymbol
PamGui pamGui
PamControllerInterface pamControllerInterface
PamView.PamTabbedPane.GhostGlassPane glassPane
java.awt.Rectangle lineRect
java.awt.Color lineColor
int dragTabIndex
PamColors.PamColor defaultColor
boolean hasGhost
boolean isPaintScrollArea
PamColors.PamColor defaultColor
PamColors.PamColor defaultColor
PamColors.PamColor defaultColor
javax.swing.JLabel timeUTC
PamGui pamGUI
java.awt.Component currentPCUComponent
PamControlledUnit currentControlledUnit
PamController pamController
javax.swing.JButton startButton
javax.swing.JButton stopButton
PamColors.PamColor defaultColor
javax.swing.Timer barTimer
PamViewParameters viewParameters
javax.swing.JTextField startTime
javax.swing.JTextField endTime
javax.swing.JTextField analStartTime
javax.swing.JTextField analEndTime
javax.swing.JCheckBox useAnalTime
javax.swing.JCheckBox[] useBoxes
javax.swing.JButton selectAll
javax.swing.JButton clearAll
HidingDialogPanel hidingDialogPanel
javax.swing.JCheckBox pinButton
javax.swing.ImageIcon settings
javax.swing.ImageIcon pinImage
javax.swing.ImageIcon pinHide
java.awt.Component mainComponent
int direction
boolean canScroll
PamPanel edgePanel
javax.swing.JButton showButton
javax.swing.JButton hideButton
java.lang.String showSymbol
java.lang.String hideSymbol
javax.swing.JScrollPane scrollPanel
java.awt.Component thingToHide
java.awt.Component componentFrame
java.lang.String title
boolean dblClkClose
boolean highlight
java.awt.Color highlightColour
java.util.ArrayList<E> tabs
java.util.ArrayList<E> tabListeners
java.awt.Color background
java.awt.Color highlight
java.awt.Color textColour
java.awt.Color borderColour
javax.swing.JButton settingsButton
PamGridBagContraints c
ImportDataDialog singleInstance
FileImportParams params
java.awt.Window parentFrame
java.lang.String[] extensions
javax.swing.JButton browse
javax.swing.JComboBox<E> comboBox
PatchPanelParameters patchPanelParameters
PatchPanelControl patchPanelControl
SourcePanel sourcePanel
javax.swing.JCheckBox[][] patchBoxes
javax.swing.JCheckBox immediate
javax.swing.JLabel[] leftLabels
javax.swing.JLabel[] rightLabels
boolean constructionComplete
double[][] patches
int dataSource
boolean immediate
int outputChannels
int inputChannels
int[] firstChannels
java.util.HashMap<K,V> map
java.lang.String selectedPortName
gnu.io.CommPortIdentifier selectedPortIdentifier
javax.swing.JComboBox<E> serialPortsChoice
gnu.io.SerialPort ttya
javax.swing.JLabel choice
int PAD
java.lang.String windowName
int sides
int radialAxis
int rangeStartm
int rangeEndm
int orientation
int rangeStartdB
int rangeEnddB
int angleGrid
boolean[] showDetector
int[] detectorLifetime
long scrollMinMillis
long scrollMaxMillis
double viewRangeSeconds
long scrollValue
radardisplay.RadarParametersDialog.StylePanel stylePanel
radardisplay.RadarParametersDialog.ScalePanel scalePanel
RadarProjector radarProjector
radardisplay.RadarParametersDialog.DetectorsPanel detectorsPanel
int maxRadialIndex
RadarDisplay parentRadar
RWEParameters rweParameters
SourcePanel sourcePanel
javax.swing.JTextField startFreq
javax.swing.JTextField endFreq
javax.swing.JTextField thresholdDB
javax.swing.JTextField minSoundType
java.lang.String dataSourceName
int channelMap
double startFreq
double endFreq
double[] backgroundConst
double threshold
int maxSoundGap
int maxFrequencyGap
int minSoundType
RoccaSpecPopUp rspu
PamAxis pamAxis
RoccaAxis.Orientation orientation
int fftDataBlock
int channelMap
double noiseSensitivity
int energyBinSize
java.io.File roccaOutputDirectory
java.io.File roccaContourStatsOutputFilename
java.io.File roccaSightingStatsOutputFilename
java.io.File roccaClassifierModelFilename
java.io.File roccaClassifier2ModelFilename
int stage1Link
int classificationThreshold
int sightingThreshold
java.lang.String filenameTemplate
java.lang.String wmDataSource
java.lang.String clickDataSource
java.lang.String clickNoiseDataSource
boolean useFFT
boolean useClick
boolean useWMD
int[] clickTypeList
java.lang.String notesEncounterID
java.lang.String notesCruiseID
java.lang.String notesDataProvider
java.lang.String notesKnownSpecies
RoccaControl roccaControl
RoccaParameters roccaParameters
javax.swing.JPanel sourceSubPanel
SourcePanel fftSourcePanel
javax.swing.JPanel fftSourceSubPanel
SourcePanel clickSourcePanel
SourcePanel clickNoiseSourcePanel
javax.swing.JPanel clickSourceSubPanel
javax.swing.JButton clickTypeDialog
SourcePanel wmSourcePanel
javax.swing.JPanel wmSourceSubPanel
javax.swing.JTabbedPane tabbedPane
javax.swing.JTextField noiseSensitivity
javax.swing.JTextField energyBinSize
javax.swing.JLabel outputDirLbl
javax.swing.JTextField outputDirTxt
javax.swing.JButton outputDirectoryButton
javax.swing.JLabel outputContourStatsLbl
javax.swing.JLabel outputSightingStatsLbl
javax.swing.JTextField outputContourStatsTxt
javax.swing.JTextField outputSightingStatsTxt
javax.swing.JButton outputContourStatsFileButton
java.io.File outputDirectory
java.io.File outputContourStatsFile
java.io.File outputSightingStatsFile
javax.swing.JLabel classifierLbl
javax.swing.JTextField classifierTxt
javax.swing.JButton classifierButton
javax.swing.JTextArea classifierDesc
javax.swing.JScrollPane scrollPaneDesc
javax.swing.JTextField classifier2Txt
javax.swing.JButton classifier2Button
javax.swing.JButton recalcButton
javax.swing.JButton reclassifyButton
javax.swing.JButton clearClassifier
javax.swing.JComboBox<E> stage1Classes
javax.swing.DefaultComboBoxModel<E> stage1ClassModel
java.util.Vector<E> stage1ClassList
java.io.File classifierFile
java.io.File classifier2File
javax.swing.JLabel classDetLbl
javax.swing.JTextField classificationThreshold
javax.swing.JTextField sightingThreshold
javax.swing.JTextField filenameTemplate
javax.swing.JLabel filenameTemplateLbl
javax.swing.JLabel templateSymbols
javax.swing.JRadioButton fftButton
javax.swing.JRadioButton clickButton
javax.swing.JRadioButton wmButton
java.lang.String fftButtonText
java.lang.String clickButtonText
java.lang.String wmButtonText
java.awt.Frame parentFrame
java.lang.String[] clickTypes
int[] selectedClickTypes
javax.swing.JTextField notesEncounter
javax.swing.JLabel notesEncounterLbl
javax.swing.JTextField notesCruise
javax.swing.JLabel notesCruiseLbl
javax.swing.JTextField notesProvider
javax.swing.JLabel notesProviderLbl
javax.swing.JTextField notesSpecies
javax.swing.JLabel notesSpeciesLbl
RoccaClassifier roccaClassifier
weka.classifiers.AbstractClassifier roccaClassifierModel
weka.core.Instances trainedDataset
RoccaRFModel[] modelList
java.lang.String[] thisSpList
int thisDetection
javax.swing.JFrame thisFrame
RoccaProcess roccaProcess
RoccaParameters roccaParameters
FFTDataBlock fftData
PamRawDataBlock rawData
long[] timeBins
double[] freqBins
double startFreq
long startTime
double endFreq
double boxTopFreq
double boxBotFreq
long endTime
SpectrogramDisplay display
int channel
double[][] data
RoccaContourDataBlock roccaContourDataBlock
java.awt.Point[] contour
java.awt.Point dragPoint
java.awt.Point lastMovedPoint
int lastMovedIndx
java.lang.String windowTitle
RoccaContour roccaContour
SpectrogramPanel dataPanel
float currHZoom
float currVZoom
boolean hZoom
boolean vZoom
boolean showPeaks
boolean startIsSet
boolean endIsSet
boolean settingStart
boolean settingEnd
boolean settingLowpass
boolean settingHighpass
boolean contourState
boolean tracingNow
java.util.ArrayList<E> userPoints
java.lang.String sNum
double highpassFreq
double lowpassFreq
java.lang.String oldHighPass
java.lang.String oldLowPass
RoccaAxis freqAxis
javax.swing.JButton brightDec
javax.swing.JButton brightInc
javax.swing.JLabel classifiedAsLbl
javax.swing.JPanel classifierPanel
javax.swing.JButton classify
javax.swing.JButton contrastDec
javax.swing.JButton contrastInc
javax.swing.JButton discardExit
javax.swing.JTextField highPass
javax.swing.JLabel highpassLbl
javax.swing.JLabel highpassUnitsLbl
javax.swing.JPanel jPanel1
javax.swing.JPanel jPanel2
javax.swing.JTextField lowPass
javax.swing.JLabel lowpassLbl
javax.swing.JLabel lowpassUnitsLbl
javax.swing.JLabel noiseSensLbl
javax.swing.JSpinner noiseSensSpinner
javax.swing.JButton recalcContour
javax.swing.JButton reset
javax.swing.JButton resetContour
javax.swing.JButton resetFilters
javax.swing.JButton saveExit
javax.swing.JButton saveNewNameExit
javax.swing.JButton saveWavOnly
javax.swing.JScrollPane scroller
javax.swing.JToggleButton selectEnd
javax.swing.JToggleButton selectStart
javax.swing.JToggleButton setHighpass
javax.swing.JToggleButton setLowpass
javax.swing.JLabel statusBar
javax.swing.JButton toggleContour
javax.swing.JToggleButton btnPickPoints
javax.swing.JButton undoLastMove
javax.swing.JButton zoomIn
javax.swing.JButton zoomOut
RoccaSpecPopUp roccaSpecPopUp
java.awt.image.BufferedImage spectrogram
java.awt.Image scaledSpectrogram
java.awt.image.ImageFilter scaleFilter
float zoom
float vzoom
double colorOffset
double colorScale
double[][] data
java.awt.Point[] contour
int width
int height
ColourArray colourArray
double minFFT
double maxFFT
java.lang.String dataSourceName
int channelBitmap
double threshold
double f1
double f2
double backgroundConstant
double vetoPreTime
double vetoPostTime
boolean randomFillSpectorgram
boolean randomFillWaveform
SourcePanel sourcePanel
javax.swing.JTextField threshold
javax.swing.JTextField f1
javax.swing.JTextField f2
javax.swing.JTextField timeConstant
javax.swing.JTextField preTime
javax.swing.JTextField postTime
javax.swing.JRadioButton specFill
javax.swing.JRadioButton specZeros
javax.swing.JRadioButton waveFill
javax.swing.JRadioButton waveZeros
VetoParameters vetoParameters
PamDataBlock<Tunit extends PamDataUnit> excludedSource
SerialPortPanel serialPortPanel
SerialLoggerParams serialLoggerParams
javax.swing.JTextField minTime
SerialPortParameters serialParameters
int minIntervalMillis
java.lang.String name
LatLong startPosition
double course
double slantAngle
double height
double speed
boolean pistonBeam
double pistonRadius
java.lang.String signalName
double amplitude
double meanInterval
boolean randomIntervals
int movementModel
double depth
SimObject simObject
SimProcess simProcess
javax.swing.JTextField name
LatLongDialogStrip latDialogStrip
LatLongDialogStrip longDialogStrip
javax.swing.JTextField cog
javax.swing.JTextField spd
javax.swing.JTextField depth
javax.swing.JTextField amplitude
javax.swing.JTextField slant
javax.swing.JComboBox<E> soundTypes
javax.swing.JTextField meanInterval
javax.swing.JCheckBox randomIntervals
javax.swing.JCheckBox pistonModel
javax.swing.JTextField pistonRadius
javax.swing.JComboBox<E> movementModel
javax.swing.JButton advancedButton
javax.swing.JTextField[] rangeMin
javax.swing.JTextField[] rangeMax
javax.swing.JTextField[] rangeStep
javax.swing.JTextField numAngles
GridMovementParams gridMovementParams
SMLGainControl smlGainControl
SMLGainParameters gainParams
javax.swing.JComboBox<E> niDevices
Nidaq niDaq
javax.swing.JLabel[] phoneLabel
javax.swing.JComboBox<E>[] gainDAC
javax.swing.JComboBox<E>[] filterDAC
javax.swing.JComboBox<E>[] gainLists
javax.swing.JComboBox<E>[] filterLists
javax.swing.JCheckBox gangGains
javax.swing.JCheckBox gangFilters
boolean listsComplete
java.lang.String acquisitionModule
int niDeviceNumber
double[] indexedVoltage
boolean gangGains
boolean gangFilters
int[] gainChannelIndex
int[] phoneGainIndex
int[] filterChannelIndex
int[] phoneFilterIndex
SMLPingerControl pingerControl
SMLPingerParams pingerParams
SerialPortPanel serialPortPanel
javax.swing.JComboBox<E> modeList
javax.swing.JComboBox<E> freqList
javax.swing.JTextField onPeriod
javax.swing.JTextField lowPeriod
javax.swing.JTextField numPulses
javax.swing.JTextField cyclePeriod
javax.swing.JTextField storageInterval
javax.swing.JCheckBox verboseOutput
java.lang.String serialPortName
int serialPortBitsPerSecond
int runMode
boolean verboseOutput
int frequencyCode
int pulseOnPeriod
int pulseLowPeriod
int tempReadInterval
int numPulses
int cyclePeriod
PlaybackParameters playbackParameters
PlaybackSourcePanel sourcePanel
PlaybackControl playbackControl
PlaybackSystem playbackSystem
int maxChannels
javax.swing.JPanel dialogPanel
java.awt.Component dialogComponent
PlaybackDialogComponent playbackDialogComponent
int dataSource
int channelBitmap
int deviceNumber
int deviceType
boolean defaultSampleRate
float playbackRate
java.lang.String rawDataSource
int channelBitmap
int bitDepth
boolean enableBuffer
int bufferLength
java.lang.String outputFolder
java.lang.String fileInitials
java.lang.String fileType
int autoInterval
int autoDuration
int maxLengthSeconds
boolean limitLengthSeconds
long maxLengthMegaBytes
boolean limitLengthMegaBytes
boolean datedSubFolders
java.util.ArrayList<E> recorderTriggerDatas
boolean autoStart
int oldStatus
autoStart
RawSourceDialogPanel sourcePanel
SoundRecorder.RecorderSettingsDialog.BufferPanel bufferPanel
SelectFolder selectFolder
SoundRecorder.RecorderSettingsDialog.OutputFormat outputFormat
SoundRecorder.RecorderSettingsDialog.FileLengthPanel fileLengthPanel
SoundRecorder.RecorderSettingsDialog.AutoPanel autoPanel
RecorderSettings recorderSettings
java.lang.String triggerName
boolean enabled
double secondsBeforeTrigger
double secondsAfterTrigger
int minDetectionCount
int countSeconds
int minGapBetweenTriggers
int maxTotalTriggerLength
int dayBudgetMB
long lastTriggerStart
long lastTriggerEnd
long usedDayBudget
RecorderTriggerData rtData
javax.swing.JTextField preSeconds
javax.swing.JTextField postSeconds
javax.swing.JTextField minDetections
javax.swing.JTextField countTime
javax.swing.JTextField maxLength
javax.swing.JTextField minGap
javax.swing.JTextField dayBudget
javax.swing.JTextField remainingBudget
javax.swing.JButton resetButton
javax.swing.JButton triggerOptions
java.awt.Image bgImage
java.awt.Graphics2D overlayG2d
javax.swing.JPanel imagePanel
boolean direction
int topBorder
int bottomBorder
double scaleWidthfactor
double scaleX
double scaleY
double barPosition
int PlotRectangleLHS
int PlotRectangleRHS
int PlotRectangleTop
int PlotRectangleBottom
javax.swing.Timer t
float stringWidth
float stringHeight
int squareXpos
java.lang.String sourceName
java.lang.String windowName
int fftBlockIndex
int nPanels
boolean hideSidePanels
int[] channelList
double[] frequencyLimits
double[] amplitudeLimits
java.lang.Integer horizontalSplitLocation
boolean hideViewerSpectrogram
ColourArray.ColourArrayType colourMap
boolean wrapDisplay
boolean timeScaleFixed
double displayLength
int pixelsPerSlics
boolean showScale
boolean showWaveform
boolean autoScaleWaveform
boolean[][] showDetector
boolean[] showPluginDisplay
boolean[] useSpectrogramMarkObserver
javax.swing.JComboBox<E> sourceList
javax.swing.JLabel[] panelChannelLabel
javax.swing.JComboBox<E>[] panelChannelList
javax.swing.JLabel source
javax.swing.JLabel sourceData
javax.swing.JLabel channel
javax.swing.JLabel fftLen
javax.swing.JLabel fftLenData
javax.swing.JLabel fftHop
javax.swing.JLabel fftHopData
javax.swing.JLabel sampleRate
javax.swing.JLabel sampleRateData
javax.swing.JTextField minFData
javax.swing.JTextField maxFData
javax.swing.JTextField nPanels
javax.swing.JButton minDefault
javax.swing.JButton maxDefault
javax.swing.JTextField minAmplitude
javax.swing.JTextField maxAmplitude
javax.swing.JComboBox<E> colourList
javax.swing.JTextField pixsPerSlice
javax.swing.JTextField secsPerScreen
javax.swing.JRadioButton wrapDisplay
javax.swing.JRadioButton scrollDisplay
javax.swing.JRadioButton pixs
javax.swing.JRadioButton secs
javax.swing.JCheckBox showViewerSpectrogram
int currentNumPanels
int numChannel
Spectrogram.SpectrogramParamsDialog.SourcePanel sourcePanel
FFTDataBlock fftBlock
float defaultMinFreq
float defaultMaxFreq
Spectrogram.SpectrogramParamsDialog.PluginPanel pluginPanel
Spectrogram.SpectrogramParamsDialog.ObserverPanel observerPanel
SpectrogramParameters spectrogramParameters
SpectrogramNoiseProcess spectrogramNoiseProcess
SpectrogramNoiseDialogPanel spectrogramNoiseDialogPanel
SpectrogramNoiseSettings spectrogramNoiseSettings
SourcePanel sourcePanel
int minNumberofTDs
boolean firstOnly
boolean primaryHydrophoneSel
int primaryHydrophone
int maxQueueNumber
long maxBuffer
int maximumNumberofPossibilities
boolean showOnlyLowestChiValueDelay
double alarmRange
boolean mapAxisVis
double xOffset
double yOffset
double headingOffset
java.util.ArrayList<E> tdExportFiles
java.util.ArrayList<E> resultExportFiles
boolean exportLocToCSV
boolean exportMatchToCSV
boolean appendDelays
int[] channels
java.util.ArrayList<E> channelClusters
boolean enableClustering
boolean useHiResSymbols
boolean[] selectedLocModels
java.util.ArrayList<E> detectionNExportFiles
int currentResultFilter
StaticLocaliserControl slControl
StaticLocaliserParams slParams
javax.swing.JTextField range
Simplex3DStatic simplex
staticLocaliser.algorithms.MCMCMimplex mcmc
HyperboleLoc hyperbolic
int selectedAlgorithm
MimplexParams mimplexParams
javax.swing.JTextField tdSearchNumber
javax.swing.JTextField tdLocNumber
PamPanel tdAlgSearchPanel
PamPanel tdAlgLocPanel
PamPanel mimplexPanel
StaticLocalise staticloclaiser
javax.swing.JCheckBox tryZero
java.util.ArrayList<E> tdSearchAlgorithms
java.util.ArrayList<E> tdLocAlgorithms
boolean tryZero
ClickDetection click
java.awt.Window parentFrame
javax.swing.JComboBox<E> fileList
java.lang.String currentFile
javax.swing.JButton browseButton
javax.swing.JCheckBox append
int listSize
java.util.ArrayList<E> timeDelays
java.io.File filePath
PamPanel mainPanel
HyperbolicLocParams hyperbolicLocParams
javax.swing.JCheckBox hyperbole3D
javax.swing.JTextField hSize
javax.swing.JRadioButton loc3D
javax.swing.JRadioButton loc2DXY
int[] hydrophoneChannelList
javax.swing.JCheckBox firstOnly
javax.swing.JTextField minTD
javax.swing.JCheckBox usePrimeHydrophone
javax.swing.JTextField primaryHydrophone
javax.swing.JCheckBox saveLowestChiValue
javax.swing.JTextField maxPos
java.lang.String currentFile
javax.swing.JTextField maxBuffer
javax.swing.JTextField queueLength
javax.swing.JCheckBox[] enableChannels
int[] hydrophoneMap
javax.swing.JComboBox<E>[] clusterChannels
javax.swing.JRadioButton sync
javax.swing.JRadioButton unsync
javax.swing.JCheckBox hiResplotSymbol
javax.swing.JTextField xOffset
javax.swing.JTextField yOffset
javax.swing.JTextField headingOffset
PamPanel mainPanel
PamPanel batchOptions
PamPanel mapOptions
PamPanel genOptions
PamPanel channelOptions
PamPanel detectionN
javax.swing.JCheckBox saveCSV
javax.swing.JCheckBox saveMatch
StaticLocalisationMainPanel sLMainPanel
javax.swing.JCheckBox showLowestChi
javax.swing.JComboBox<E> fileList
javax.swing.JButton browseButton
java.awt.Window parentFrame
int maxlistSize
javax.swing.JTabbedPane tabs
javax.swing.JComboBox<E> fileListdN
javax.swing.JTabbedPane batchProcess
PamPanel resultParamsPanel
javax.swing.JComboBox<E> filterChoice
PamPanel resultsFilterHolder
javax.swing.JPanel mainPanel
StaticLocalisationMainPanel staticlocalisationDialog
java.util.ArrayList<E> datBlockSelectionBoxes
javax.swing.JPanel comboBoxes
javax.swing.JScrollPane scrollPane
javax.swing.JTextField numberBox
javax.swing.JTextField nameBox
double maxChiSquared
double maxHeight
double minHeight
double maxRange
TargetMotionLocaliser<T extends PamDetection> targetMotionLocaliser
ModelControlPanel modelControlPanel
EventControlPanel<T extends PamDetection> eventControlPanel
ModelResultPanel modelResultPanel
DialogMap<T extends PamDetection> dialogMap2D
DialogMap<T extends PamDetection> dialogMap3D
DialogMap<T extends PamDetection> currentMap
TMDialogComponent[] dialogComponents
javax.swing.JPanel mapBorder
int visCount
TipOfTheDayManager tipManager
PamTip currentTip
javax.swing.JTextPane tipText
javax.swing.JTextArea tipTitle
javax.swing.JCheckBox showAtStartup
javax.swing.JButton nextTip
javax.swing.JButton prevTip
javax.swing.JButton close
java.lang.String[] styles
javax.swing.text.StyledDocument doc
UserDisplayProvider userDisplayProvider
UserDisplayComponent userDisplayComponent
java.lang.String name
LatLong position
java.lang.Double bearing
java.lang.Double pitch
LatLong latLongOrigin
java.awt.Point horizonPoint
double distancePixels
int imageAnimal
int groupSize
java.awt.Point animalPoint
java.lang.Double locDistance
java.lang.Double locDistanceError
java.lang.Double locBearing
java.lang.Double locBearingError
java.lang.Double locPitch
java.lang.Double locPitchError
LatLong locLatLong
java.lang.Long imageTime
java.lang.Double imageBearing
java.lang.Double imageBearingErr
java.lang.Double imagePitch
java.lang.Double imagePitchErr
java.lang.Double imageTilt
java.lang.Double imageTiltErr
LatLong imageOrigin
double pixelAccuracy
java.lang.String imageName
double angleCorrection
java.lang.String comment
VRCalibrationData calibrationData
VRHeightData heightData
VRHorzCalcMethod rangeMethod
VRMethod vrMethod
java.io.File imageDirectory
int imageScaling
boolean maintainAspectRatio
java.util.ArrayList<E> calibrationDatas
int currentCalibrationIndex
java.util.ArrayList<E> heightDatas
int currentHeightIndex
java.util.ArrayList<E> landMarks
int currentLandMarkIndex
LandMarkGroup manualGPS
int currentManualGPSIndex
int rangeMethod
boolean drawTempHorizon
boolean measureAngles
java.lang.String angleDataBlock
java.io.File currShoreFile
java.io.File shoreFile
java.io.File currTideFile
boolean ignoreClosest
boolean showShore
boolean showShorePoints
VRMeasurement vrMeasurement
VRControl vrControl
javax.swing.JTextField range
javax.swing.JTextField accuracy
javax.swing.JTextField frameAngle
javax.swing.JTextField groupNumber
javax.swing.JTextField individualNumber
javax.swing.JLabel imageName
javax.swing.JLabel imageItem
javax.swing.JLabel angleLabel
javax.swing.JPanel angleRow
javax.swing.JTextField cameraAngle
javax.swing.JTextField angleCorrection
javax.swing.JTextField angleTotal
DBTextArea comment
VRHeightData vrHeightData
javax.swing.JTextField name
javax.swing.JTextField height
LandMark vrLandMarkData
LatLong origin
javax.swing.JTextField name
javax.swing.JTextField latitude
javax.swing.JTextField longitude
javax.swing.JTextField height
VRControl vrControl
javax.swing.JTextField bearing
javax.swing.JTextField pitch
javax.swing.JTextField measurementLat
javax.swing.JTextField measurementLong
javax.swing.JTextField measurementHeight
javax.swing.JTabbedPane tabbedPanel
java.awt.Frame frame
VRControl vrControl
videoRangePanel.panels.LandMarkPanel landMarkManagerPanel
javax.swing.JTextField name
VRCalibrationData vrCalibrationData
VRCalibrationData existingCalibrationData
VRControl vrControl
javax.swing.JTextField objectSize
javax.swing.JTextField objectDistance
javax.swing.JTextField calibrationValue
javax.swing.JTextField name
javax.swing.JButton addButton
javax.swing.JButton replaceButton
javax.swing.JButton closeButton
VRControl vrControl
java.awt.image.BufferedImage scaledImage
javax.swing.JScrollPane scrollPane
javax.swing.JPanel picturePanel
javax.swing.plaf.LayerUI<V extends java.awt.Component> currentLayerUi
javax.swing.JLayer<V extends java.awt.Component> jlayer
int imageWidth
int imageHeight
int frameWidth
int frameHeight
int panelWidth
int panelHeight
int cropWidth
int cropHeight
double xScale
double yScale
java.awt.Point currentMouse
float brightness
float contrast
java.awt.Point anchor
javax.swing.JTabbedPane tabbedPanel
videoRangePanel.panels.VRParametersDialog.ImagePanel imagePanel
videoRangePanel.panels.VRParametersDialog.CalibrationPanel calibrationPanel
videoRangePanel.panels.VRParametersDialog.CalcPanel calcPanel
videoRangePanel.panels.VRParametersDialog.HeightPanel heightPanel
videoRangePanel.panels.VRParametersDialog.AnglesPanel anglesPanel
videoRangePanel.panels.VRParametersDialog.ShorePanel shorePanel
VRControl vrControl
VRParameters vrParameters
java.awt.Frame parentFrams
VRParametersDialog THIS
videoRangePanel.panels.VRParametersDialog.LandGroupMarkPanel landMarkPanel
videoRangePanel.panels.VRParametersDialog.ImageLocationPanel cameraLocationPanel
videoRangePanel.panels.VRParametersDialog.TidePanel tidePanel
VRControl vrControl
VRMethod vrMethod
javax.swing.JTextField bearing
javax.swing.JSpinner tiltSpinner
javax.swing.JButton leftBig
javax.swing.JButton leftSmall
javax.swing.JButton rightBig
javax.swing.JButton rightSmall
javax.swing.JLabel imageWidthInfo
javax.swing.JLabel shoreInfo
double smallStep
double bigStep
java.lang.Double imageHeading
java.lang.Double tilt
PamLabel tiltLabel
VRControl vrControl
javax.swing.JLabel imageTilt
javax.swing.JLabel imageBearing
javax.swing.JLabel imagePitch
javax.swing.JLabel animalBearing
javax.swing.JLabel animalDistance
javax.swing.JTextField fragmentLength
javax.swing.JTextField sectionLength
javax.swing.JTextField nBoots
javax.swing.JTextField[] freqRange
javax.swing.JTextField trainingFile
javax.swing.JComboBox<E> classifierTypes
javax.swing.JButton choseFile
WhistleClassifierControl whistleClassifierControl
WhistleClassificationDialog whistleClassificationDialog
java.awt.Frame frame
WhistleClassificationParameters whistleClassificationParameters
WhistleClassifierControl whistleClassifierControl
SelectFolder selectFolder
javax.swing.JCheckBox useFolderNames
whistleClassifier.ClassifierTrainingDialog.DataViewPanel dataViewPanel
TrainingDataCollection trainingDataCollection
int classifierType
int fftLength
int fftHop
int fragmentLength
int sectionLength
double minimumProbability
In a linear classifier, probabilities are normalised to one, ideally one output is close to one and the others are small, but often you get several candidate values. This should be able to weed these out and create an unknown class.
With the quadratic classifier, output for each species is an absolute probability so setting a minimum will easily generate an unknown class.
double[] frequencyRange
float sampleRate
int nBootstrap
Jama.Matrix confusionMatrix
Jama.Matrix stdConfusion
ClassifierParams classifierParams
java.lang.String[] speciesList
java.lang.String fileName
boolean dumpTextFile
int minimumContourLength
java.lang.String species
int fftLength
float sampleRate
int ffthop
int nContours
long trainingTime
java.lang.String sourceDataType
java.lang.String storageSource
java.util.ArrayList<E> trainingContours
WhistleClassifierControl whistleClassifierControl
java.awt.Frame frame
WhistleClassificationDialog THIS
WhistleClassificationParameters whistleClassificationParameters
SourcePanel sourcePanel
whistleClassifier.WhistleClassificationDialog.TrainingPanel trainingPanel
whistleClassifier.WhistleClassificationDialog.RunningPanel runningPanel
javax.swing.JRadioButton trainButton
javax.swing.JRadioButton runButton
java.lang.String dataSource
int operationMode
java.lang.String trainingDataFolder
java.lang.String trainingSpecies
boolean wavFolderNameAsSpecies
boolean trainingDataFolderAsSpecies
FragmentClassifierParams fragmentClassifierParams
int lowWhistleClearTime
int lowWhistleNumber
boolean alwaysClassify
ClassifierTrainingDialog trainingDialog
BatchTrainingParams batchTrainingParams
javax.swing.JTextField[] fragmentLength
javax.swing.JTextField[] sectionLength
javax.swing.JTextField[] minProbability
java.lang.String[] rowHeadings
java.lang.String[] colHeadings
javax.swing.JProgressBar progressBar
javax.swing.JLabel progressLabel
javax.swing.JLabel timeRemaining
FragmentClassifierParams fragmentClassifierParams
BatchTrainingWorker batchTrainingWorker
WhistleClassificationParameters whistleClassificationParameters
FragmentClassifierParams fragmentClassifierParams
WhistleClassifierControl whistleClassifierControl
SelectFolder selectFolder
javax.swing.JCheckBox useFolderNames
javax.swing.JCheckBox dumpTextFile
whistleClassifier.training.ClassifierTrainingDialog.DataSelectPanel dataSelectPanel
whistleClassifier.training.ClassifierTrainingDialog.DataViewPanel dataViewPanel
whistleClassifier.training.ClassifierTrainingDialog.ProgressPanel progressPanel
whistleClassifier.training.ClassifierTrainingDialog.RunTrainingPanel runTrainingPanel
ClassifierTrainer classifierTrainer
java.awt.Window frame
boolean needsSave
int trainingStatus
boolean isRunning
TrainingDataCollection trainingDataCollection
boolean creating
BatchTrainingDialog batchTrainingDialog
java.lang.Object enableSynch
java.lang.String species
int fftLength
float sampleRate
int ffthop
int nContours
long trainingTime
java.lang.String sourceDataType
java.lang.String storageSource
java.util.ArrayList<E> trainingContours
java.lang.String fftDataName
double searchStartHz
double searchEndHz
double[] peakTimeConstant
double detectionThreshold
double maxPercentOverThreshold
int minPeakWidth
int maxPeakWidth
int maxGap
double maxDF
double maxD2F
double maxDA
double weightDF
double weightD2F
double weightDA
double minOccupancy
int minLength
int maxInflextions
double eventIntegrationTime
int eventMinWhistleCount
double eventMaxGapTime
int peakDetectionMethod
int channelBitmap
int[] channelGroups
int groupingType
boolean ackOutOfDate
WhistleControl whistleControl
float sampleRate
whistleDetector.WhistleParametersDialog.GroupedWhistleSourcePanel whistleSourcePanel
whistleDetector.WhistleParametersDialog.PeakPanel peakPanel
whistleDetector.WhistleParametersDialog.LinkPanel linkPanel
whistleDetector.WhistleParametersDialog.WhistlePanel whistlePanel
whistleDetector.WhistleParametersDialog.EventPanel eventPanel
WhistleMoanControl whistleMoanControl
WhistleToneParameters whistleToneParameters
GroupedSourcePanel sourcePanel
javax.swing.JTextField minFreq
javax.swing.JTextField maxFreq
javax.swing.JComboBox<E> connectType
javax.swing.JTextField minLength
javax.swing.JTextField minPixels
javax.swing.JTextField maxCrossLength
javax.swing.JComboBox<E> fragmentation
SpectrogramNoiseDialogPanel spectrogramNoiseDialogPanel
int connectType
double minFrequency
double maxFrequency
int minPixels
int minLength
int maxCrossLength
int fragmentationMethod
SpectrogramNoiseSettings specNoiseSettings
boolean showContourOutline
boolean stretchContours
int shortLength
int shortShowPolicy
double mapLineLength
WhistleMoanControl whistleMoanControl
javax.swing.JCheckBox showContourOutline
javax.swing.JCheckBox stretchContours
javax.swing.JTextField shortLength
javax.swing.JRadioButton[] radioButtons
java.lang.String[] buttonNames
javax.swing.JTextField mapLineLength
WMRecorderTriggerData wmrtData
boolean ok
javax.swing.JTextField minFreq
javax.swing.JTextField maxFreq
WMRecorderTrigger wmRecordTrigger
WMAlarmParameters wmAlarmParameters
javax.swing.JTextField minFreq
javax.swing.JTextField maxFreq
javax.swing.JTextField minLength
javax.swing.JTextField minAmplitude
WILDParameters wildParameters
WILDControl wildControl
SourcePanel sourcePanelGPS
SerialPortPanel serialPortPanel
javax.swing.JCheckBox outputButton
javax.swing.JTextField outputDirTxt
javax.swing.JButton outputDirectoryButton
WILDSidePanel.SidePanel.GPSDataPanel gpsDataPanel
javax.swing.JPanel animalLocPanel
WorkshopProcessParameters workshopProcessParameters
SourcePanel sourcePanel
javax.swing.JTextField background
javax.swing.JTextField lowFreq
javax.swing.JTextField highFreq
javax.swing.JTextField threshold
int fftDataBlock
int lowFreq
int highFreq
double backgroundTimeConstant
double threshold
int channelList
PamSymbol mapSymbol
WorldMapComponent worldMapComponent