Package clickTrainDetector.classification.simplechi2classifier

Class Chi2ThresholdClassifier

java.lang.Object

clickTrainDetector.classification.simplechi2classifier.Chi2ThresholdClassifier

All Implemented Interfaces:

CTClassifier

public class Chi2ThresholdClassifier
extends Object
implements CTClassifier

Simple classifier which has a chi2 threshold

Author:

Jamie Macaulay

Field Summary

Fields

Modifier and Type	Field	Description
Chi2ThresholdParams	clssfrParams	The chi2 threshold to set.
CTClassifierGraphics	ctClassifierGraphics	The classifier graphics

Fields inherited from interface clickTrainDetector.classification.CTClassifier

NOSPECIES, PRECLASSIFIERFLAG

Constructor Summary

Constructors

Constructor	Description
Chi2ThresholdClassifier(int defaultSpeciesID)
Chi2ThresholdClassifier(ClickTrainControl clickTrainControl, int defaultSpeciesID)

Method Summary

Modifier and Type	Method	Description
Chi2CTClassification	classifyClickTrain(CTDataUnit clickTrain)	Classify a click train detection.
void	createDataSelector(PamDataBlock<?> source)	Get the data selector.
CTClassifierGraphics	getCTClassifierGraphics()
DataSelector	getDataSelector()
String	getName()	Get the name of the classifier.
Chi2ThresholdParams	getParams()	Get the simple classifier parameters.
int	getSpeciesID()	Get the unique species ID for the classifier.
void	setParams(CTClassifierParams ctClassifierParams)	Set the classifier parameters.
void	setParams(Chi2ThresholdParams clssfrParams)	Set the classifier parameters.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

clssfrParams

public Chi2ThresholdParams clssfrParams

The chi2 threshold to set. This is the chi2 value divided by the number of clicks in the train

ctClassifierGraphics

public CTClassifierGraphics ctClassifierGraphics

The classifier graphics

Constructor Details

Chi2ThresholdClassifier

public Chi2ThresholdClassifier(ClickTrainControl clickTrainControl,
 int defaultSpeciesID)

Chi2ThresholdClassifier

public Chi2ThresholdClassifier(int defaultSpeciesID)

Method Details

classifyClickTrain

public Chi2CTClassification classifyClickTrain(CTDataUnit clickTrain)

Description copied from interface: CTClassifier

Classify a click train detection.

Specified by:

classifyClickTrain in interface CTClassifier

Returns:

the classified data block.

createDataSelector

public void createDataSelector(PamDataBlock<?> source)

Get the data selector.

Parameters:

source - - the source data block

getName

public String getName()

Description copied from interface: CTClassifier

Get the name of the classifier.

Specified by:

getName in interface CTClassifier

Returns:

the name of the classifier

getCTClassifierGraphics

public CTClassifierGraphics getCTClassifierGraphics()

Specified by:

getCTClassifierGraphics in interface CTClassifier

setParams

public void setParams(Chi2ThresholdParams clssfrParams)

Set the classifier parameters.

Parameters:

clssfrParams - - the classifier parameters to set.

getParams

public Chi2ThresholdParams getParams()

Get the simple classifier parameters.

Specified by:

getParams in interface CTClassifier

Returns:

the classifier parameters.

setParams

public void setParams(CTClassifierParams ctClassifierParams)

Description copied from interface: CTClassifier

Set the classifier parameters.

Specified by:

setParams in interface CTClassifier

Parameters:

ctClassifierParams - - the ct classifier paratmers

getSpeciesID

public int getSpeciesID()

Description copied from interface: CTClassifier

Get the unique species ID for the classifier.

Specified by:

getSpeciesID in interface CTClassifier

Returns:

the name of the classifier

getDataSelector

public DataSelector getDataSelector()