Package rawDeepLearningClassifier.logging

Class DLAnnotationSQL

java.lang.Object

rawDeepLearningClassifier.logging.DLAnnotationSQL

All Implemented Interfaces:

SQLLoggingAddon

public class DLAnnotationSQL
extends Object
implements SQLLoggingAddon

Log deep learning annotation to the database

Author:

Jamie Macaulay

Constructor Summary

Constructors

Constructor	Description
DLAnnotationSQL(DLAnnotationType dlAnnotationType)

Method Summary

Modifier and Type	Method	Description
void	addTableItems(EmptyTableDefinition pamTableDefinition)	Add a load of columns to an existing table definition
String	getName()	Get a name for the SQLLogging Addon.
boolean	loadData(SQLTypes sqlTypes, EmptyTableDefinition pamTableDefinition, PamDataUnit pamDataUnit)	Load data - that is read data from the table definition and turn it into something sensible within or attached to the data unit.
static String	prediction2String(ArrayList<PredictionResult> arrayList)	Create a JSON compatible matrix from a string.
boolean	saveData(SQLTypes sqlTypes, EmptyTableDefinition pamTableDefinition, PamDataUnit pamDataUnit)	Save data - that is transfer data from the pamDataUnit to the data objects within the table definition
static ArrayList<PredictionResult>	string2Predictions(String predictionsString, int predicitonType)	Create a list of predictions from a JSON string stored in a database table.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

DLAnnotationSQL

public DLAnnotationSQL(DLAnnotationType dlAnnotationType)

Method Details

addTableItems

public void addTableItems(EmptyTableDefinition pamTableDefinition)

Description copied from interface: SQLLoggingAddon

Add a load of columns to an existing table definition

Specified by:

addTableItems in interface SQLLoggingAddon

Parameters:

pamTableDefinition -

saveData

public boolean saveData(SQLTypes sqlTypes,
 EmptyTableDefinition pamTableDefinition,
 PamDataUnit pamDataUnit)

Description copied from interface: SQLLoggingAddon

Save data - that is transfer data from the pamDataUnit to the data objects within the table definition

Specified by:

saveData in interface SQLLoggingAddon

Parameters:

pamTableDefinition - table definition

pamDataUnit - data unit

Returns:

true if successful

loadData

public boolean loadData(SQLTypes sqlTypes,
 EmptyTableDefinition pamTableDefinition,
 PamDataUnit pamDataUnit)

Description copied from interface: SQLLoggingAddon

Load data - that is read data from the table definition and turn it into something sensible within or attached to the data unit.

Specified by:

loadData in interface SQLLoggingAddon

Parameters:

pamTableDefinition - table definition

pamDataUnit - data unit

Returns:

true if successful

getName

public String getName()

Description copied from interface: SQLLoggingAddon

Get a name for the SQLLogging Addon. this is used in identifying the Addon meaning that it should be possible to have two Addon's with the same class, but different fields.

Specified by:

getName in interface SQLLoggingAddon

Returns:

the name of the Logging Addon

string2Predictions

public static ArrayList<PredictionResult> string2Predictions(String predictionsString,
 int predicitonType)

Create a list of predictions from a JSON string stored in a database table.

Parameters:

predictionsString - - JSON string

predicitonType - - the prediction object type e.g.ModelResultBinaryFactory.GENERIC

Returns:

a list of prediction objects.

prediction2String

public static String prediction2String(ArrayList<PredictionResult> arrayList)

Create a JSON compatible matrix from a string.

Parameters:

predictions - - the spectrum.

Returns:

string representation for the predictions in JSON format