whistlesAndMoans
Class DiscardingFragmenter

java.lang.Object
  whistlesAndMoans.DiscardingFragmenter

All Implemented Interfaces:

RegionFragmenter

Direct Known Subclasses:

FragmentingFragmenter

public class DiscardingFragmenter
extends java.lang.Object
implements RegionFragmenter

Whistle fragmenter which completely discards all regions which have more than one peak in any slice.

Author:

Doug Gillespie

Field Summary

protected int	maxPeaks
protected ConnectedRegion	motherRegion
protected int	nFragments
protected int	nSlices
protected int[]	slicePeaks
protected int	totalPeaks

Constructor Summary

DiscardingFragmenter()

Method Summary

private int	countSlicePeaks() Get the maximum number of peaks in any slice of a region.
int	fragmentRegion(ConnectedRegion connectedRegion) Fragment a connected region
ConnectedRegion	getFragment(int fragment) Get a specific fragment
int	getNumFragments() Get the number of fragments

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

motherRegion

protected ConnectedRegion motherRegion

slicePeaks

protected int[] slicePeaks

maxPeaks

protected int maxPeaks

nSlices

protected int nSlices

totalPeaks

protected int totalPeaks

nFragments

protected int nFragments

Constructor Detail

DiscardingFragmenter

public DiscardingFragmenter()

Method Detail

fragmentRegion

public int fragmentRegion(ConnectedRegion connectedRegion)

Description copied from interface: RegionFragmenter

Fragment a connected region

Specified by:

fragmentRegion in interface RegionFragmenter

Parameters:

connectedRegion - region to fragment

Returns:

number of fragments.

countSlicePeaks

private int countSlicePeaks()

Get the maximum number of peaks in any slice of a region.

Returns:

number of peaks.

getFragment

public ConnectedRegion getFragment(int fragment)

Description copied from interface: RegionFragmenter

Get a specific fragment

Specified by:

getFragment in interface RegionFragmenter

Parameters:

fragment - fragment number (0 to getNumFragments);

Returns:

the ith fragment

getNumFragments

public int getNumFragments()

Description copied from interface: RegionFragmenter

Get the number of fragments

Specified by:

getNumFragments in interface RegionFragmenter

Returns:

the number of fragments