Package cpod

Class CPODClick

java.lang.Object

PamguardMVC.PamDataUnit<PamDataUnit,SuperDetection>

cpod.CPODClick

All Implemented Interfaces:

Comparable<PamDataUnit>, RawDataHolder

public class CPODClick
extends PamDataUnit<PamDataUnit,SuperDetection>
implements RawDataHolder

CPOD or FPOD click.

Field Summary

Fields inherited from class PamguardMVC.PamDataUnit

absBlockIndex, localisation

Constructor Summary

Constructors

Constructor	Description
CPODClick(long tMillis, long fileSamples, short nCyc, short bw, short kHz, short endF, short spl, short slope, short[] shortData)	Constructor for a CPOD click.

Method Summary

Modifier and Type	Method	Description
double	getAmplitudeDB()	Get a rough estimation of the recieved amplitude of a CPOD in dB
short	getBw()	Get the bandwidth in kHz
CPODClassification	getClassification()
CPODClickTrainDataUnit	getCPODClickTrain()	Get the click train detection from the click detection
RawDataTransforms	getDataTransforms()	Get the raw data transforms class.
short	getEndF()
long	getICISamples()
short	getkHz()
short	getnCyc()
short[]	getRawData()	Get the raw data.
short	getSlope()
short	getSpl()
String	getSummaryString()	Return an html formatted summary string describing the detection which can be used in tooltips anywhere in PAMGuard.
double[][]	getWaveData()	Get arrays of raw audio data, one per channel.
static CPODClick	makeClick(CPODControl cpodControl, long minuteMillis, short[] shortData)	Deprecated.
static CPODClick	makeClick(DataUnitBaseData baseData, short[] shortData)	Create a CPOD click.
static CPODClick	makeCPODClick(long tMillis, long fileSamples, short[] shortData)	Make a CPOD click.
static CPODClick	makeFPODClick(long tMillis, long fileSamples, FPODReader.FPODdata fpodData)	Make a FPOD click.
void	setBw(short bw)
void	setClassification(CPODClassification cpodClassification)
void	setEndF(short endF)
void	setICISamples(long iciSamples)
void	setkHz(short kHz)
void	setnCyc(short nCyc)
void	setRawDataTransfroms(RawDataTransforms rawDataTransforms)
void	setSlope(short slope)
void	setSpl(short spl)
void	setWavData(double[][] ds)

Methods inherited from class PamguardMVC.PamDataUnit

addDataAnnotation, addSuperDetection, amplifyMeasuredAmplitudeByDB, amplifyMeasuredAmplitudeByLinear, calcSnapshotGeometry, clearOandAngles, clearUpdateCount, compareTo, findDataAnnotation, findDataAnnotation, freeData, getAbsBlockIndex, getAnnotationsSummaryString, getBasicData, getCalculatedAmlitudeDB, getChannelBitmap, getColourIndex, getDataAnnotation, getDatabaseIndex, getDatabaseUpdateOf, getDataUnitFileInformation, getDataUnitPopupMenu, getDurationInMilliseconds, getEndTimeInMilliseconds, getFrequency, getFrequencyOverlap, getGpsPosition, getHydrophoneBitmap, getHydrophoneHeading, getLastChangeTime, getLastSample, getLastUpdateTime, getLocalisation, getMeasuredAmplitude, getMeasuredAmplitudeType, getNoiseBackground, getNumDataAnnotations, getOriginLatLong, getParentDataBlock, getSampleDuration, getSampleDurationAsInt, getSeconds, getSequenceBitmap, getSequenceBitmapObject, getSignalExcess, getSignalSPL, getSnapshotGeometry, getStartSample, getSuperDetection, getSuperDetection, getSuperDetection, getSuperDetection, getSuperDetection, getSuperDetectionsCount, getSuperDetectionSyncronisation, getSuperId, getTimeDelaysSeconds, getTimeMilliseconds, getTimeNanoseconds, getTimeOverlap, getUID, getUpdateCount, isEmbryonic, isForceAmpRecalc, linAmplitudeToDB, removeDataAnnotation, removeDataAnnotation, removeSuperDetection, setAbsBlockIndex, setCalculatedAmlitudeDB, setChannelBitmap, setDatabaseIndex, setDatabaseUpdateOf, setDataUnitFileInformation, setDurationInMilliseconds, setEmbryonic, setForceAmpRecalc, setFrequency, setInfo, setLastUpdateTime, setLocalisation, setMeasuredAmpAndType, setMeasuredAmplitude, setMeasuredAmplitudeType, setNoiseBackground, setParentDataBlock, setSampleDuration, setSequenceBitmap, setSignalExcess, setSignalSPL, setSnapshotGeometry, setStartSample, setTimeDelaysSeconds, setTimeMilliseconds, setUID, setUniqueSuperDetection, sortOutputMaps, updateDataUnit

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

CPODClick

public CPODClick(long tMillis,
 long fileSamples,
 short nCyc,
 short bw,
 short kHz,
 short endF,
 short spl,
 short slope,
 short[] shortData)

Constructor for a CPOD click. This adds all basic information that is required for a CPOD or FPOD click

Parameters:

tMillis - - the time in millis.

fileSamples - - the file samples

nCyc - - the number of cycles

bw - -the bandwidth in kHZ

kHz - - the frequency in kHz.

endF - - the end frequency in kHz.

spl - - the spl (0-255) unitless.

slope - - the slope

shortData - - the raw data.

Method Details

makeClick

public static CPODClick makeClick(DataUnitBaseData baseData,
 short[] shortData)

Create a CPOD click. (This is used to load CPOD clicks from the binary store)

Parameters:

baseData - - the base data.

shortData - -contains the raw CPOD data

Returns:

a new CPOD click.

makeClick

@Deprecated
public static CPODClick makeClick(CPODControl cpodControl,
 long minuteMillis,
 short[] shortData)

Deprecated.

Create a CPOD click. This is usually called whenever the CPOD click is imported from a CSV file.

Parameters:

minuteMillis - The time in miliiseconds of the minute block preceding the current click.

shortData -

Returns:

makeFPODClick

public static CPODClick makeFPODClick(long tMillis,
 long fileSamples,
 FPODReader.FPODdata fpodData)

Make a FPOD click. This called whenever click has been imported from a FP1 or FP3 file

Parameters:

tMillis - - the time in milliseconds datenum.

fileSamples - - the number of samples into the file the CPOD click is at - this is calculated from CPODClickDataBlock.CPOD_SR

shortData - - the raw data from the CPOD click. This can be 8 bytes or 30 bytes if a click train clcik

Returns:

a CPODClick object.

makeCPODClick

public static CPODClick makeCPODClick(long tMillis,
 long fileSamples,
 short[] shortData)

Make a CPOD click. This called whenever click has been imported from a CP1 or CP3 file

Parameters:

tMillis - - the time in milliseconds datenum.

fileSamples - - the number of samples into the file the CPOD click is at - this is calculated from CPODClickDataBlock.CPOD_SR

shortData - - the raw data from the CPOD click. This can be 8 bytes or 40 bytes if a click train clcik

Returns:

a CPODClick object.

getRawData

public short[] getRawData()

Get the raw data.

Returns:

the raw data.

getnCyc

public short getnCyc()

Returns:

the nCyc

setnCyc

public void setnCyc(short nCyc)

Parameters:

nCyc - the nCyc to set

getBw

public short getBw()

Get the bandwidth in kHz

Returns:

the bw

setBw

public void setBw(short bw)

Parameters:

bw - the bw to set

getkHz

public short getkHz()

Returns:

the kHz

setkHz

public void setkHz(short kHz)

Parameters:

kHz - the kHz to set

getEndF

public short getEndF()

Returns:

the endF

setEndF

public void setEndF(short endF)

Parameters:

endF - the endF to set

getSpl

public short getSpl()

Returns:

the spl

setSpl

public void setSpl(short spl)

Parameters:

spl - the spl to set

getSlope

public short getSlope()

Returns:

the slope

setSlope

public void setSlope(short slope)

Parameters:

slope - the slope to set

setICISamples

public void setICISamples(long iciSamples)

getICISamples

public long getICISamples()

getAmplitudeDB

public double getAmplitudeDB()

Get a rough estimation of the recieved amplitude of a CPOD in dB

Overrides:

getAmplitudeDB in class PamDataUnit<PamDataUnit,SuperDetection>

Returns:

the amplitude in dB.

getSummaryString

public String getSummaryString()

Description copied from class: PamDataUnit

Return an html formatted summary string describing the detection which can be used in tooltips anywhere in PAMGuard.

Overrides:

getSummaryString in class PamDataUnit<PamDataUnit,SuperDetection>

Returns:

summary string

getWaveData

public double[][] getWaveData()

Description copied from interface: RawDataHolder

Get arrays of raw audio data, one per channel. Assume that the array matches getChannelMap() !

Specified by:

getWaveData in interface RawDataHolder

Returns:

arrays of raw data by channel

getDataTransforms

public RawDataTransforms getDataTransforms()

Description copied from interface: RawDataHolder

Get the raw data transforms class. This handles standard data transforms that are often used in raw data units, e.g. calculating the spectrum, filtering waveforms, getting data as an int16 (short) array, etc.

Specified by:

getDataTransforms in interface RawDataHolder

Returns:

the data transforms object.

setRawDataTransfroms

public void setRawDataTransfroms(RawDataTransforms rawDataTransforms)

setWavData

public void setWavData(double[][] ds)

getCPODClickTrain

public CPODClickTrainDataUnit getCPODClickTrain()

Get the click train detection from the click detection

Returns:

the click train detection

setClassification

public void setClassification(CPODClassification cpodClassification)

getClassification

public CPODClassification getClassification()