Serialized Form
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Package Acquisition
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Class Acquisition.AcquisitionDialog
class AcquisitionDialog extends PamDialog implements Serializable-
Serialized Fields
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channelListPanelArea
JPanel channelListPanelArea
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currentChannelListPanel
ChannelListPanel currentChannelListPanel
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currentDaqSystem
DaqSystem currentDaqSystem
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dcTimeconstant
JTextField dcTimeconstant
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deviceSpecificPanel
JComponent deviceSpecificPanel
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deviceType
JComboBox deviceType
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mainPanel
JPanel mainPanel
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nChannels
JTextField nChannels
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offlineDAQDialogPanel
OfflineFileDialogPanel offlineDAQDialogPanel
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ppsDialogPanel
PPSDialogPanel ppsDialogPanel
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preampGain
JTextField preampGain
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sampleRate
JTextField sampleRate
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standardChannelListPanel
ChannelListPanel standardChannelListPanel
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subtractDC
JCheckBox subtractDC
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vPeak2Peak
JTextField vPeak2Peak
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-
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Class Acquisition.AcquisitionParameters
class AcquisitionParameters extends Object implements Serializable- serialVersionUID:
- 2L
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Serialized Fields
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channelList
int[] channelList
List of channels data are acquired from (not necessarily 0,1,2, etc.) With NI boards, this has become a pain since if multiple boards are used, there may be repeats within this list. -
daqSystemType
String daqSystemType
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dcTimeConstant
double dcTimeConstant
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hydrophoneList
int[] hydrophoneList
Hydrophone list is a short list of length equal to the number of channels, so if your channel list does not start at zero, you have to first use the channelListIndexes before using this lookup table. -
nChannels
int nChannels
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ppsParameters
PPSParameters ppsParameters
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preamplifier
Preamplifier preamplifier
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sampleRate
float sampleRate
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subtractDC
boolean subtractDC
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voltsPeak2Peak
double voltsPeak2Peak
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Class Acquisition.CheckWavFileHeaders
class CheckWavFileHeaders extends PamDialog implements Serializable-
Serialized Fields
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allFiles
ArrayList<File> allFiles
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checkFilesWorker
Acquisition.CheckWavFileHeaders.CheckFiles checkFilesWorker
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doneFiles
int doneFiles
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folder
File folder
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folderInputSystem
FolderInputSystem folderInputSystem
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folderName
JLabel folderName
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nErrors
int nErrors
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nFiles
int nFiles
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progressBar
JProgressBar progressBar
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ran
boolean ran
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running
boolean running
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subFolders
boolean subFolders
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textArea
JTextArea textArea
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-
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Class Acquisition.FileInputParameters
class FileInputParameters extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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bitDepth
int bitDepth
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realTime
boolean realTime
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recentFiles
ArrayList<String> recentFiles
A list of the recent files or folders selected. -
repeatLoop
boolean repeatLoop
Repeat in an infinite loop -
skipStartFileTime
long skipStartFileTime
Skip a section an initial section of the file in millis. For example, use with SoundTrap calibration values. -
systemType
String systemType
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Class Acquisition.FolderInputParameters
class FolderInputParameters extends FileInputParameters implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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mergeFiles
boolean mergeFiles
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selectedFileNames
String[] selectedFileNames
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subFolders
boolean subFolders
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Class Acquisition.SoundCardParameters
class SoundCardParameters extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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deviceNumber
int deviceNumber
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systemType
String systemType
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-
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Package Acquisition.filedate
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Class Acquisition.filedate.FileDateDialog
class FileDateDialog extends PamDialog implements Serializable-
Serialized Fields
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additionalOffset
JTextField additionalOffset
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allowCustomFormats
boolean allowCustomFormats
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autoFormat
JRadioButton autoFormat
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customDateTimeFormat
JTextField customDateTimeFormat
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daylightSaving
JCheckBox daylightSaving
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forcePCTime
JCheckBox forcePCTime
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manualFormat
JRadioButton manualFormat
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soundTrapDate
JPanel soundTrapDate
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standardFileDateSettings
StandardFileDateSettings standardFileDateSettings
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timeZoneIds
String[] timeZoneIds
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timeZones
JComboBox<String> timeZones
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-
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Class Acquisition.filedate.StandardFileDateSettings
class StandardFileDateSettings extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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additionalOffsetMillis
long additionalOffsetMillis
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adjustDaylightSaving
boolean adjustDaylightSaving
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dateTimeFormatToUse
String dateTimeFormatToUse
Date-time format to use. Currently only used when reading Soundtrap XML files -
forcedDateFormat
String forcedDateFormat
format to force the type of date string. otherwise it's automatic -
forcePCTime
boolean forcePCTime
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timeZoneName
String timeZoneName
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useBespokeFormat
boolean useBespokeFormat
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-
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Package Acquisition.gpstiming
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Class Acquisition.gpstiming.PPSParameters
class PPSParameters extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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gpsPPSChannel
int gpsPPSChannel
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gpsPPSNmeaSource
String gpsPPSNmeaSource
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gpsPPSThreshold
double gpsPPSThreshold
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storageInterval
int storageInterval
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useGpsPPS
boolean useGpsPPS
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-
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Package Acquisition.sud
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Class Acquisition.sud.PamSudParams
class PamSudParams extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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zeroPad
boolean zeroPad
Zero padding fills gaps in sud files with zeros - these gaps are usually due to errors in the recording hardware.Without zero pad then time drift within a file can be difficult to predict, however zero padding means the sample numbers in other files e.g. csv sensor files will not align.
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Class Acquisition.sud.SudAudioSettingsPane.SudSettingsPanel
class SudSettingsPanel extends PamPanel implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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zeroPadSud
JCheckBox zeroPadSud
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Package AirgunDisplay
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Class AirgunDisplay.AirgunDimensionsDrawing
class AirgunDimensionsDrawing extends ShipDimensionsDrawing implements Serializable-
Serialized Fields
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airgunSymbol
PamSymbol airgunSymbol
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dimE
double dimE
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Class AirgunDisplay.AirgunParameters
class AirgunParameters extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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dimE
double dimE
distance in m towards the stern from the vessels GPS receiver -
dimF
double dimF
distance in m towards the starboard side from the vessels GPS receiver -
exclusionColor
Color exclusionColor
Colour for exclusion zone on map. -
exclusionRadius
int exclusionRadius
radius of exclusion xone in m -
fixedPosition
LatLong fixedPosition
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gunDepth
double gunDepth
Gun depth in metres. -
gunsMMSIVessel
int gunsMMSIVessel
mmsi number of vessel if guns are on another vessel -
gunsReferencePosition
int gunsReferencePosition
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gunsThisVessel
boolean gunsThisVessel
True if guns are on this vessel -
hasGunsReferencePosition
boolean hasGunsReferencePosition
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predictAhead
boolean predictAhead
predict where we'll be in a certain time -
secondsAhead
int secondsAhead
prediction time in seconds -
showExclusionZone
boolean showExclusionZone
Show exclusion zone on the map
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Class AirgunDisplay.AirgunParametersDialog
class AirgunParametersDialog extends PamDialog implements Serializable-
Serialized Fields
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airgunParameters
AirgunParameters airgunParameters
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exclusionPanel
AirgunDisplay.AirgunParametersDialog.ExclusionPanel exclusionPanel
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fieldNames
String[] fieldNames
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shipDimensionsFields
ShipDimensionsFields shipDimensionsFields
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shipDrawing
ShipDimensionsPanel shipDrawing
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shipIDPanel
AirgunDisplay.AirgunParametersDialog.ShipIDPanel shipIDPanel
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Package AIS
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Class AIS.AISDataUnit
class AISDataUnit extends PamDataUnit implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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aisChannel
String aisChannel
When provided, the AIS channel is indicated as either "1" or "2." This channel indication is relative to the operating conditions of the transponder when the packet is received. This field shall be null when the channel identification is not provided. -
aisLocalisation
AISLocalisation aisLocalisation
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charData
String charData
Contents of the M.1371 radio message using the six-bit field typeThe maximum string length of encapsulation is limited such that the total number of sentence characters does not exceed 82. This field supports a maximum of 62 valid characters for messages transferred using multiple sentences, and 63 valid characters for messages using a single sentence.
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dataType
String dataType
AIVDM, etc. -
fillBits
int fillBits
Number of "fill-bits" added to complete the last six-bit characterEach character in the preceding six-bit coded character string represents six binary bits. This parameter indicates the number of bits that were added to the end of the binary packet as a result of creating the last character of the string. When the coding of the last six-bit character of the message packet does not create additional "fill-bits," this value shall be set to zero. The value "0" indicates that no "fill-bits" were added. This field may not be null.
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isInRange
boolean isInRange
Flag used when a limit is placed on range. If it's clearly out of range, then this flag is set and no more updates are made from static data.the flag can be set false again if new position data come within range.
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messageId
int messageId
Pulled out from the start of the AIVDM string. -
mmsiNumber
int mmsiNumber
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newUnit
boolean newUnit
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positionReports
ArrayList<AISPositionReport> positionReports
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sentenceNumber
int sentenceNumber
Message sentence number -
sequentialIdentifier
int sequentialIdentifier
The "message sequential identifier" is a number from 0 to 9 that is sequentially assigned as needed. This identifier is incremented for each new multi-sentence message. The count resets to 0, after 9 is used. For radio broadcast messages requiring multiple sentences, each sentence of the message contains the same sequential identification number. The purpose of this number is to link the separate sentences containing portions of the same radio message. This allows for the possibility that other sentences might be interleaved with the message sentences that contain the complete message contents. This number also links an ABK-sentence acknowledgement to the appropriate BBM-sentence. -
staticData
AISStaticData staticData
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stationType
StationType stationType
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totalSentences
int totalSentences
Total number of sentences needed to transfer the message
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Class AIS.AISDisplayDialog
class AISDisplayDialog extends PamDialog implements Serializable-
Serialized Fields
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aisParameters
AISParameters aisParameters
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predictionArrow
JCheckBox predictionArrow
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predictionTime
JTextField predictionTime
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showTail
JCheckBox showTail
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tailLength
JTextField tailLength
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-
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Class AIS.AISParameters
class AISParameters extends Object implements Serializable- serialVersionUID:
- 0L
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Serialized Fields
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limitRange
boolean limitRange
Only record AIS data within maxRange_kn of the vessel -
maxRange_km
double maxRange_km
Maximum range for AIS data. Data further off than this will be ignored. -
nmeaSource
String nmeaSource
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predictionLength
int predictionLength
Prediction length in seconds -
showPredictionArrow
boolean showPredictionArrow
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showTail
boolean showTail
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tailLength
int tailLength
Tail length in minutes.
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Class AIS.AISPositionReport
class AISPositionReport extends AISReport implements Serializable- serialVersionUID:
- 0L
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Serialized Fields
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commsState
int commsState
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courseOverGround
double courseOverGround
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dataIndicator
int dataIndicator
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dataTerminalReady
int dataTerminalReady
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latLong
LatLong latLong
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messageId
int messageId
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navigationStatus
int navigationStatus
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positionAccuracy
int positionAccuracy
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rateOfTurn
double rateOfTurn
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repeatIndicator
int repeatIndicator
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reportOk
boolean reportOk
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speedOverGround
double speedOverGround
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timeMilliseconds
long timeMilliseconds
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trueHeading
double trueHeading
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utcHours
int utcHours
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utcMinutes
int utcMinutes
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utcSeconds
int utcSeconds
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Class AIS.AISReport
class AISReport extends Object implements Serializable- serialVersionUID:
- 0L
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Class AIS.AISSettingsDialog
class AISSettingsDialog extends PamDialog implements Serializable-
Serialized Fields
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aisParameters
AISParameters aisParameters
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limitRange
JCheckBox limitRange
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maxRange
JTextField maxRange
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sourcePanel
SourcePanel sourcePanel
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-
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Class AIS.AISStaticData
class AISStaticData extends AISReport implements Serializable- serialVersionUID:
- 0L
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Serialized Fields
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callSign
String callSign
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classBPart
int classBPart
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dataClass
String dataClass
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destination
String destination
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dimA
double dimA
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dimB
double dimB
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dimC
double dimC
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dimD
double dimD
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etaDay
int etaDay
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etaHour
int etaHour
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etaMilliseconds
long etaMilliseconds
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etaMinute
int etaMinute
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etaMonth
int etaMonth
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imoNumber
int imoNumber
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offPosition
boolean offPosition
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shipName
String shipName
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shipType
int shipType
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staticDraught
double staticDraught
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virtualAidFlag
boolean virtualAidFlag
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Package alarm
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Class alarm.AlarmDialog
class AlarmDialog extends PamDialog implements Serializable-
Serialized Fields
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alarmActionBoxes
JCheckBox[] alarmActionBoxes
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alarmActionButtons
JButton[] alarmActionButtons
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alarmControl
AlarmControl alarmControl
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alarmCount
JTextField[] alarmCount
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alarmInterval
JTextField alarmInterval
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alarmParameters
AlarmParameters alarmParameters
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alarmTime
JTextField alarmTime
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countType
JComboBox<String> countType
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holdTime
JTextField holdTime
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settingsButton
JButton settingsButton
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sourcePanel
SourcePanel sourcePanel
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Class alarm.AlarmParameters
class AlarmParameters extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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countIntervalMillis
long countIntervalMillis
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countType
int countType
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dataSourceName
String dataSourceName
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enabledActions
boolean[] enabledActions
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hadHold
boolean hadHold
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holdSeconds
int holdSeconds
Default time to hold data for. -
minAlarmIntervalMillis
long minAlarmIntervalMillis
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triggerCounts
double[] triggerCounts
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Package alarm.actions.email
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Class alarm.actions.email.SendEmailSettings
class SendEmailSettings extends Object implements Serializable- serialVersionUID:
- 1L
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Class alarm.actions.email.SendEmailSettingsDialog
class SendEmailSettingsDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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attachScreenshot
JCheckBox attachScreenshot
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emailSettings
SendEmailSettings emailSettings
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fromAddress
JTextField fromAddress
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host
JTextField host
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port
JTextField port
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sendEmailAction
SendEmailAction sendEmailAction
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sendOnAmber
JCheckBox sendOnAmber
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sendOnRed
JCheckBox sendOnRed
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toAddress
JTextField toAddress
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username
JTextField username
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Package alarm.actions.serial
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Class alarm.actions.serial.AlarmSerialDialog
class AlarmSerialDialog extends PamDialog implements Serializable-
Serialized Fields
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printStrings
JCheckBox printStrings
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serialPanel
SerialPortPanel serialPanel
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serialSettings
AlarmSerialSettings serialSettings
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Class alarm.actions.serial.AlarmSerialSettings
class AlarmSerialSettings extends Object implements Serializable- serialVersionUID:
- 1L
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Package alarm.actions.sound
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Class alarm.actions.sound.PlaySoundDialog
class PlaySoundDialog extends PamDialog implements Serializable-
Serialized Fields
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levelPanels
alarm.actions.sound.PlaySoundDialog.LevelPanel[] levelPanels
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playSound
PlaySound playSound
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playSoundParams
PlaySoundParams playSoundParams
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-
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Class alarm.actions.sound.PlaySoundParams
class PlaySoundParams extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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soundFile
File[] soundFile
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-
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Package alarm.actions.udp
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Class alarm.actions.udp.AlarmUDPDialog
class AlarmUDPDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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alarmUDPParams
AlarmUDPParams alarmUDPParams
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udpAddr
JTextField udpAddr
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udpPort
JTextField udpPort
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Class alarm.actions.udp.AlarmUDPParams
class AlarmUDPParams extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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destAddr
String destAddr
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destPort
int destPort
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Package amplifier
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Class amplifier.AmpDialog
class AmpDialog extends PamDialog implements Serializable-
Serialized Fields
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ampControl
AmpControl ampControl
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ampGain
JTextField[] ampGain
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ampParameters
AmpParameters ampParameters
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invert
JCheckBox[] invert
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labels
JLabel[] labels
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sourcePanel
SourcePanel sourcePanel
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-
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Class amplifier.AmpParameters
class AmpParameters extends Object implements Serializable- serialVersionUID:
- 0L
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Serialized Fields
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gain
double[] gain
gain is stored as a simple facter (NOT dB) for speed of use. The dialog where they are set may well convert to dB values. -
rawDataSource
int rawDataSource
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-
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Package analogarraysensor
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Class analogarraysensor.ArraySensorParams
class ArraySensorParams extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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arrayDisplayParameters
ArrayDisplayParameters arrayDisplayParameters
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readIntervalMillis
int readIntervalMillis
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-
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Package analogarraysensor.swing
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Class analogarraysensor.swing.AnalogSensorDialog
class AnalogSensorDialog extends PamDialog implements Serializable-
Serialized Fields
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analogDialogPanel
PamDialogPanel analogDialogPanel
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analogSensorControl
ArraySensorControl analogSensorControl
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analogSensorParams
ArraySensorParams analogSensorParams
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logRawData
JCheckBox logRawData
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nStreamers
int nStreamers
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readInterval
JTextField readInterval
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streamerText
JTextField streamerText
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-
-
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Package analoginput
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Class analoginput.AnalogDeviceParams
class AnalogDeviceParams extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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calibrationTable
Hashtable<Integer,
CalibrationData> calibrationTable -
channelRangeData
Hashtable<Integer,
AnalogRangeData> channelRangeData -
channelTable
Hashtable<Integer,
Integer> channelTable
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Class analoginput.AnalogInputParams
class AnalogInputParams extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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selectedType
String selectedType
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Class analoginput.AnalogRangeData
class AnalogRangeData extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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analogType
AnalogRangeData.AnalogType analogType
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range
double[] range
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Exception Class analoginput.AnalogReadException
class AnalogReadException extends Exception implements Serializable- serialVersionUID:
- 1L
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Package analoginput.brainboxes
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Class analoginput.brainboxes.BrainBoxParams
class BrainBoxParams extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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analogDeviceParams
AnalogDeviceParams analogDeviceParams
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ipAddress
String ipAddress
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-
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Package analoginput.calibration
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Class analoginput.calibration.CalibrationData
class CalibrationData extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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params
double[] params
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-
Exception Class analoginput.calibration.CalibrationException
class CalibrationException extends Exception implements Serializable
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Package analoginput.measurementcomputing
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Class analoginput.measurementcomputing.MCCParameters
class MCCParameters extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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analogDeviceParams
AnalogDeviceParams analogDeviceParams
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deviceNumber
int deviceNumber
Really the device index, not the device number.
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-
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Package angleMeasurement
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Class angleMeasurement.AngleCalibrationDialog
class AngleCalibrationDialog extends PamDialog implements Serializable-
Serialized Fields
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angleCalibration
AngleCalibration angleCalibration
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angleControl
AngleControl angleControl
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angleParameters
AngleParameters angleParameters
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calibrationPanel
angleMeasurement.AngleCalibrationDialog.CalibrationPanel calibrationPanel
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latestRawAngle
Double latestRawAngle
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measuredCorrection
angleMeasurement.AngleCalibrationDialog.MeasuredCorrection measuredCorrection
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paramErrors
boolean paramErrors
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plotPanel
angleMeasurement.AngleCalibrationDialog.PlotPanel plotPanel
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trueToMeasured
angleMeasurement.AngleCalibrationDialog.TrueToMeasured trueToMeasured
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-
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Class angleMeasurement.AngleLoggingParameters
class AngleLoggingParameters extends Object implements Serializable- serialVersionUID:
- 0L
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Serialized Fields
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logAngles
int logAngles
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logInterval
double logInterval
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timedRandom
boolean timedRandom
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Class angleMeasurement.AngleParameters
class AngleParameters extends Object implements Serializable- serialVersionUID:
- 0L
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Serialized Fields
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angleLoggingParameters
AngleLoggingParameters angleLoggingParameters
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angleOffset
double angleOffset
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calibrationData
double[] calibrationData
This is the raw calibration data, and is probably the oposote of what we want, but it's the way we want to measure it - i..e it's the output of the 3030 (or other device and a measured real angle. I'll write some funcitons to convert the other way ! -
calibrationInterval
int calibrationInterval
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geoReferenceAngle
double geoReferenceAngle
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Class angleMeasurement.FluxgateWorldDialog
class FluxgateWorldDialog extends PamDialog implements Serializable-
Serialized Fields
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angleLoggingDialogPanel
AngleLoggingDialogPanel angleLoggingDialogPanel
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cancelZero
JButton cancelZero
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currentCorrectedAngle
JLabel currentCorrectedAngle
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currentRawAngle
JLabel currentRawAngle
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dontGet
boolean dontGet
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fluxgateWorldAngles
FluxgateWorldAngles fluxgateWorldAngles
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fluxgateWorldParameters
FluxgateWorldParameters fluxgateWorldParameters
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geoReferenceAngle
JTextField geoReferenceAngle
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invertAngles
JCheckBox invertAngles
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latestRawAngle
Double latestRawAngle
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readRateList
JComboBox readRateList
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serialPortPanel
SerialPortPanel serialPortPanel
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setZero
JButton setZero
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timer
Timer timer
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-
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Class angleMeasurement.FluxgateWorldParameters
class FluxgateWorldParameters extends AngleParameters implements Serializable- serialVersionUID:
- 0L
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Serialized Fields
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invertAngles
boolean invertAngles
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portName
String portName
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readRateIndex
int readRateIndex
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-
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Package angleVetoes
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Class angleVetoes.AngleVeto
class AngleVeto extends Object implements Serializable- serialVersionUID:
- -7457498080588517537L
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Serialized Fields
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channels
int channels
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endAngle
double endAngle
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startAngle
double startAngle
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Class angleVetoes.AngleVetoDialog
class AngleVetoDialog extends PamDialog implements Serializable-
Serialized Fields
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angleVeto
AngleVeto angleVeto
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endAngle
JTextField endAngle
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startAngle
JTextField startAngle
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-
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Class angleVetoes.AngleVetoesDialog
class AngleVetoesDialog extends PamDialog implements Serializable-
Serialized Fields
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addButton
JButton addButton
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angleVetoes
AngleVetoes angleVetoes
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angleVetoParameters
AngleVetoParameters angleVetoParameters
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deleteButton
JButton deleteButton
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editbutton
JButton editbutton
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list
PamTable list
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tableData
AbstractTableModel tableData
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-
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Class angleVetoes.AngleVetoParameters
class AngleVetoParameters extends Object implements Serializable- serialVersionUID:
- 0L
-
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Package annotation
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Class annotation.AnnotationDialog
class AnnotationDialog extends PamDialog implements Serializable-
Serialized Fields
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dataAnnotationType
DataAnnotationType dataAnnotationType
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dataUnit
PamDataUnit dataUnit
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dialogPanel
AnnotationDialogPanel dialogPanel
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okButton
boolean okButton
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summaryPanel
DataUnitSummaryPanel summaryPanel
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-
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Class annotation.AnnotationSettingsDialog
class AnnotationSettingsDialog extends PamDialog implements Serializable-
Serialized Fields
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annotationType
DataAnnotationType annotationType
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dialogPanel
AnnotationSettingsPanel dialogPanel
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okPressed
boolean okPressed
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-
-
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Package annotation.calcs.snr
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Class annotation.calcs.snr.SNRAnnotationOptions
class SNRAnnotationOptions extends AnnotationOptions implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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snrAnnotationParameters
SNRAnnotationParameters snrAnnotationParameters
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Class annotation.calcs.snr.SNRAnnotationParameters
class SNRAnnotationParameters extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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bufferMillis
int bufferMillis
Buffer between both the start and end of the sound being measured and the noise measurement period -
noiseMillis
int noiseMillis
Number of millis to measure over both before and after the sound of interest.
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-
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Package annotation.dataselect
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Class annotation.dataselect.ScalarDataParams
class ScalarDataParams extends DataSelectParams implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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maxValue
double maxValue
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minValue
double minValue
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-
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Package annotation.handler
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Class annotation.handler.AnnotationChoices
class AnnotationChoices extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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allowMany
boolean allowMany
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annotationOptions
Hashtable<String,
AnnotationOptions> annotationOptions
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Class annotation.handler.AnnotationOptions
class AnnotationOptions extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
annotationName
String annotationName
-
isSelected
boolean isSelected
-
-
-
Package annotation.localise.targetmotion
-
Class annotation.localise.targetmotion.TMAnnotationOptions
class TMAnnotationOptions extends AnnotationOptions implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
localisationParams
ClickLocParams localisationParams
-
-
-
Package annotation.string
-
Class annotation.string.StringAnnotationOptions
class StringAnnotationOptions extends AnnotationOptions implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
maxLength
int maxLength
-
-
-
Package annotation.userforms
-
Class annotation.userforms.UserFormAnnotationOptions
class UserFormAnnotationOptions extends AnnotationOptions implements Serializable- serialVersionUID:
- -8028334325731182581L
-
Serialized Fields
-
udfFormName
String udfFormName
-
-
Class annotation.userforms.UserFormSymbolOptions
class UserFormSymbolOptions extends SymbolModifierParams implements Serializable-
Serialized Fields
-
controlTitle
String controlTitle
-
-
-
-
Package annotationMark
-
Class annotationMark.MarkAnnotationDialog
class MarkAnnotationDialog extends PamDialog implements Serializable-
Serialized Fields
-
annotationDataUnit
MarkDataUnit annotationDataUnit
-
annotationModule
MarkModule annotationModule
-
annotationTypes
List<DataAnnotationType<?>> annotationTypes
-
dialogPanels
ArrayList<AnnotationDialogPanel> dialogPanels
-
duration
PamTextDisplay duration
-
fRange
PamTextDisplay fRange
-
startTime
PamTextDisplay startTime
-
-
-
-
Package annotationMark.spectrogram
-
Class annotationMark.spectrogram.SpectrogramMarkDialog
class SpectrogramMarkDialog extends PamDialog implements Serializable-
Serialized Fields
-
annotationHandler
SpectrogramMarkAnnotationHandler annotationHandler
-
annotationPanel
AnnotationsSelectionPanel annotationPanel
-
spectrogramAnnotationModule
SpectrogramAnnotationModule spectrogramAnnotationModule
-
-
-
Class annotationMark.spectrogram.SpectrogramMarkParams
class SpectrogramMarkParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
annotationChoices
AnnotationChoices annotationChoices
-
-
-
Package Array
-
Class Array.ArrayDialog
class ArrayDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
cancelButton
JButton cancelButton
-
channelPanel
ChannelPanel channelPanel
-
copyArrayButton
JButton copyArrayButton
-
deleteArrayButton
JButton deleteArrayButton
-
environmentPanel
EnvironmentPanel environmentPanel
-
exportArrayButton
JButton exportArrayButton
-
helpButton
JButton helpButton
-
hydrophoneDiagram
HydrophoneDiagram hydrophoneDiagram
-
hydrophoneDialogPanel
HydrophoneDialogPanel hydrophoneDialogPanel
-
importArrayButton
JButton importArrayButton
-
instrumentIdentityPanel
InstrumentIdentityPanel instrumentIdentityPanel
-
newArrayButton
JButton newArrayButton
-
okButton
JButton okButton
-
renameArrayButton
JButton renameArrayButton
-
selectedArray
PamArray selectedArray
-
-
Class Array.ArrayParameters
class ArrayParameters extends Object implements Serializable- serialVersionUID:
- 0L
-
Class Array.EmptyLocatorSettings
class EmptyLocatorSettings extends LocatorSettings implements Serializable- serialVersionUID:
- 1L
-
Class Array.Hydrophone
class Hydrophone extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
bandwidth
double[] bandwidth
-
coordinate
double[] coordinate
-
coordinateError
double[] coordinateError
-
dontInvertDepth
boolean dontInvertDepth
-
iD
int iD
-
preampGain
double preampGain
-
sensitivity
double sensitivity
-
streamerId
int streamerId
-
timeMillis
long timeMillis
-
type
String type
-
-
Class Array.HydrophoneElementDialog
class HydrophoneElementDialog extends PamDialog implements Serializable-
Serialized Fields
-
coordinatePanel
Array.HydrophoneElementDialog.CoordinatePanel coordinatePanel
-
currentArray
PamArray currentArray
-
generalPanel
Array.HydrophoneElementDialog.GeneralPanel generalPanel
-
hydrophone
Hydrophone hydrophone
-
interpolationDialogPanel
InterpolationDialogPanel interpolationDialogPanel
-
-
-
Class Array.HydrophoneLocator
class HydrophoneLocator extends Object implements Serializable- serialVersionUID:
- 3820622344712667731L
-
Class Array.LocatorSettings
class LocatorSettings extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
locatorClass
Class locatorClass
Hydrophone locator class - now specific to each streamer.
-
-
Class Array.MasterLocator
class MasterLocator extends HydrophoneLocator implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
pamArray
PamArray pamArray
-
phoneToStreamerLUT
int[] phoneToStreamerLUT
-
-
Class Array.MovingHydrophoneLocator
class MovingHydrophoneLocator extends SimpleHydrophoneLocator implements Serializable- serialVersionUID:
- -7448060427072317265L
-
Class Array.PamArray
class PamArray extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
arrayFile
String arrayFile
-
arrayLocatorClass
Class arrayLocatorClass
Deprecated. -
arrayName
String arrayName
-
arrayShape
int arrayShape
Array shape - point, line, plane, etc. -
hydrophoneArray
ArrayList<Hydrophone> hydrophoneArray
-
hydrophoneInterpolation
int hydrophoneInterpolation
-
instrumentId
String instrumentId
Array Id. Can be anything. Compulsory for Tethys. -
instrumentType
String instrumentType
Type, used for Tethys and other meta data control -
masterLocator
MasterLocator masterLocator
-
originInterpolation
int originInterpolation
-
speedOfSound
double speedOfSound
-
speedOfSoundError
double speedOfSoundError
-
streamers
ArrayList<Streamer> streamers
-
-
Class Array.Preamplifier
class Preamplifier extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
bandwidth
double[] bandwidth
-
gain
double gain
-
-
Class Array.SimpleHydrophoneLocator
class SimpleHydrophoneLocator extends HydrophoneLocator implements Serializable- serialVersionUID:
- -8197030971819764600L
-
Class Array.StraightHydrophoneLocator
class StraightHydrophoneLocator extends MovingHydrophoneLocator implements Serializable- serialVersionUID:
- 7673685461759252089L
-
Serialized Fields
-
hydrophoneDataBlock
PamDataBlock hydrophoneDataBlock
-
lastFoundUnit
GpsDataUnit lastFoundUnit
-
lastGpsUnit
GpsDataUnit lastGpsUnit
-
lastSearchTime
long lastSearchTime
-
locatorSettings
EmptyLocatorSettings locatorSettings
-
-
Class Array.Streamer
class Streamer extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
allLocatorSettings
ArrayList<LocatorSettings> allLocatorSettings
-
allOriginSettings
ArrayList<OriginSettings> allOriginSettings
-
coordinate
double[] coordinate
Streamer coordinates. -
coordinateError
double[] coordinateError
Errors on streamer location in x,y,z -
heading
Double heading
Euler angles in degrees. -
locatorClass
Class locatorClass
-
orientationTypes
ArrayParameterType[] orientationTypes
-
originClass
Class originClass
-
pamArray
PamArray pamArray
-
pitch
Double pitch
Euler angles in degrees. -
roll
Double roll
Euler angles in degrees. -
sensorDataBlocks
String[] sensorDataBlocks
-
streamerIndex
int streamerIndex
-
streamerName
String streamerName
Identifier to use with PAMbuoy.
-
-
Class Array.StreamerDialog
class StreamerDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
constructed
boolean constructed
-
currentArray
PamArray currentArray
-
currentOriginComponent
JComponent currentOriginComponent
-
currentOriginMethod
HydrophoneOriginMethod currentOriginMethod
-
defaultStreamer
Streamer defaultStreamer
-
dx
JTextField dx
-
dy
JTextField dy
-
dz
JTextField dz
-
heading
JTextField heading
-
interpolationPanel
InterpolationDialogPanel interpolationPanel
-
localiserMethod
JComboBox<HydrophoneLocatorSystem> localiserMethod
-
locateRecieverBorder
TitledBorder locateRecieverBorder
-
mainPanel
JPanel mainPanel
-
originMethod
JComboBox<HydrophoneOriginSystem> originMethod
-
originPanel
JPanel originPanel
-
pitch
JTextField pitch
-
roll
JTextField roll
-
sensorComponents
SensorSourceComponent[] sensorComponents
-
streamerHeightLabel
JLabel streamerHeightLabel
-
streamerName
JTextField streamerName
-
x
JTextField x
-
y
JTextField y
-
z
JTextField z
-
-
Class Array.ThreadingHydrophoneLocator
class ThreadingHydrophoneLocator extends StraightHydrophoneLocator implements Serializable- serialVersionUID:
- 3244112516372812481L
-
Serialized Fields
-
headingSynchObject
Object headingSynchObject
-
storedHeading
double storedHeading
-
storedHeadingPhone
int storedHeadingPhone
-
storedHeadingTime
long storedHeadingTime
-
-
-
Package Array.importHydrophoneData
-
Class Array.importHydrophoneData.StreamerImportParams
class StreamerImportParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
hydropheonLocator
HydrophoneLocatorSystem hydropheonLocator
How to work out where hydrophones are in relation to the streamer, -
hydropheonOrigin
HydrophoneOriginSystem hydropheonOrigin
How to work out where the streamer is -
streamerIndex
int streamerIndex
StreamerIndex
-
-
Class Array.importHydrophoneData.StreamerOriginDialog
class StreamerOriginDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
-
-
Package Array.sensors
-
Class Array.sensors.ArrayDisplayParameters
class ArrayDisplayParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
headRange
int headRange
-
pitchRange
double[] pitchRange
-
pitchRollImageFile
String pitchRollImageFile
-
pitchStep
double pitchStep
-
-
-
Package Array.sensors.swing
-
Class Array.sensors.swing.ArrayDimComponent
class ArrayDimComponent extends PamPanel implements Serializable-
Serialized Fields
-
isViewer
boolean isViewer
-
minHeight
Integer minHeight
-
minWidth
Integer minWidth
-
sensorData
ArraySensorDataUnit[] sensorData
-
streamerMap
int streamerMap
-
-
-
Class Array.sensors.swing.ArrayDisplayParamsDialog
class ArrayDisplayParamsDialog extends PamDialog implements Serializable-
Serialized Fields
-
currentParams
ArrayDisplayParameters currentParams
-
heading
HeadingDialogPanel heading
-
pitchRoll
PitchRollDialogPanel pitchRoll
-
-
-
Class Array.sensors.swing.DepthComponent
class DepthComponent extends ArrayDimComponent implements Serializable-
Serialized Fields
-
paramsProvider
ArrayDisplayParamsProvider paramsProvider
-
rTriangle
PamSymbol rTriangle
-
stepSize
double stepSize
-
-
-
Class Array.sensors.swing.HeadingComponent
class HeadingComponent extends ArrayDimComponent implements Serializable-
Serialized Fields
-
paramsProvider
ArrayDisplayParamsProvider paramsProvider
-
upTriangle
PamSymbol upTriangle
-
-
-
Class Array.sensors.swing.HeadPitchRollComponent
class HeadPitchRollComponent extends ArrayDimComponent implements Serializable-
Serialized Fields
-
depthComponent
DepthComponent depthComponent
-
headComponent
HeadingComponent headComponent
-
paramsProvider
ArrayDisplayParamsProvider paramsProvider
-
prComponent
PitchRollComponent prComponent
-
-
-
Class Array.sensors.swing.PitchRollComponent
class PitchRollComponent extends ArrayDimComponent implements Serializable-
Serialized Fields
-
circle
PamSymbol circle
-
funnyImage
BufferedImage funnyImage
-
lTriangle
PamSymbol lTriangle
-
paramsProvider
ArrayDisplayParamsProvider paramsProvider
-
-
-
Class Array.sensors.swing.SensorDisplayParameters
class SensorDisplayParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
arrayDisplayParams
ArrayDisplayParameters arrayDisplayParams
-
dataSource
String dataSource
-
-
-
Package Array.streamerOrigin
-
Class Array.streamerOrigin.GPSOriginSettings
class GPSOriginSettings extends OriginSettings implements Serializable -
Class Array.streamerOrigin.OriginSettings
class OriginSettings extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
originMethodClass
Class originMethodClass
-
-
Class Array.streamerOrigin.StaticOriginSettings
class StaticOriginSettings extends OriginSettings implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
staticGpsData
GpsData staticGpsData
-
-
-
Package ArrayAccelerometer
-
Class ArrayAccelerometer.ArrayAccelDialog
class ArrayAccelDialog extends PamDialog implements Serializable-
Serialized Fields
-
accelControl
ArrayAccelControl accelControl
-
accelParams
ArrayAccelParams accelParams
-
dimChannel
JTextField[] dimChannel
-
mccPanel
MccPanel mccPanel
-
pitchOffset
JTextField pitchOffset
-
readInterval
JTextField readInterval
-
rollOffset
JTextField rollOffset
-
setZeroButton
JButton setZeroButton
-
voltsPerG
JTextField[] voltsPerG
-
zeroVolts
JTextField[] zeroVolts
-
-
-
Class ArrayAccelerometer.ArrayAccelParams
class ArrayAccelParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
boardNumber
int boardNumber
Really the board index - need to handle this in the code. -
boardRange
int boardRange
-
dimChannel
int[] dimChannel
-
pitchOffset
double pitchOffset
Tilt offset is added to the measured roll. -
readInterval
double readInterval
-
rollOffset
double rollOffset
Roll offset is added to the measured roll -
streamerIndex
int streamerIndex
-
voltsPerG
double[] voltsPerG
-
zeroVolts
double[] zeroVolts
-
-
-
Package Azigram
-
Class Azigram.AzigramDisplayDialog
class AzigramDisplayDialog extends PamDialog implements Serializable-
Serialized Fields
-
azigramControl
AzigramControl azigramControl
-
azigramParameters
AzigramParameters azigramParameters
-
outputRates
Float[] outputRates
-
resolutionPanel
ResolutionPanel resolutionPanel
-
sampleRateCombo
JComboBox<Float> sampleRateCombo
-
sourcePanel
GroupedSourcePanel sourcePanel
-
-
-
Class Azigram.AzigramParameters
class AzigramParameters extends Object implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
bearingCorrection
double[] bearingCorrection
Bearing bias/correction (degrees?) (parameter from Thode Azigram) -
channelBitmap
int channelBitmap
-
dataSource
GroupedSourceParameters dataSource
-
displayGaindB
float displayGaindB
Apply gain (in dB) when displaying on the spectrogram. This is a hack to help the Azigram look nicer. It allows the user some discretion to adjust how Azigram transparency/fade-to-black works. -
name
String name
-
outputSampleRate
float outputSampleRate
-
secAvg
double secAvg
Seconds to average PSD for long-term display or 0 for no averaging (parameter from Thode Azigram)
-
-
-
Package backupmanager
-
Class backupmanager.BackupParams
class BackupParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
scheduleState
ScheduleState scheduleState
-
scheduleType
String scheduleType
-
-
Class backupmanager.FileLocation
class FileLocation extends Object implements Serializable- serialVersionUID:
- 1L
-
Class backupmanager.FileLocationParams
class FileLocationParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
destLocation
FileLocation destLocation
-
sourceLocation
FileLocation sourceLocation
-
-
-
Package backupmanager.action
-
Exception Class backupmanager.action.BackupException
class BackupException extends Exception implements Serializable- serialVersionUID:
- 1L
-
Class backupmanager.action.CopySettings
class CopySettings extends ActionSettings implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
destLocation
FileLocation destLocation
-
-
-
Package backupmanager.bespoke
-
Class backupmanager.bespoke.BespokeIdentity
class BespokeIdentity extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
name
String name
-
-
Class backupmanager.bespoke.BespokeNameDialog
class BespokeNameDialog extends PamDialog implements Serializable-
Serialized Fields
-
bespokeBackups
BespokeBackups bespokeBackups
-
name
JTextField name
-
streamName
String streamName
-
-
-
Class backupmanager.bespoke.BespokeSettings
class BespokeSettings extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
identities
ArrayList<BespokeIdentity> identities
-
-
-
Package backupmanager.filter
-
Package backupmanager.filter.alarm
-
Class backupmanager.filter.alarm.AlarmFilterParams
class AlarmFilterParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
alarmParameters
HashMap<String,
AlarmParamSet> alarmParameters -
passEverything
boolean passEverything
-
-
Class backupmanager.filter.alarm.AlarmParamSet
class AlarmParamSet extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
postPeriod
long postPeriod
Period after the alarm that's to be kept (millis) -
prePeriod
long prePeriod
Period before the alarm that's to be kept (millis) -
useAlarm
boolean useAlarm
fire data actions on this alarm
-
-
-
Package backupmanager.settings
-
Class backupmanager.settings.ActionSettings
class ActionSettings extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
backupFilterParams
BackupFilterParams backupFilterParams
Parameters for a backup filter -
className
String className
Store the name as a string, sinc the class is not serializable. -
lastBackupDuration
long lastBackupDuration
How long the last backup took. -
lastBackupTime
long lastBackupTime
Time of the last backup in milliseconds
-
-
Class backupmanager.settings.BackupSettings
class BackupSettings extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
actionSettings
ArrayList<ActionSettings> actionSettings
-
-
Class backupmanager.settings.FileBackupSettings
class FileBackupSettings extends BackupSettings implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
sourceLocation
FileLocation sourceLocation
-
-
-
Package backupmanager.swing
-
Class backupmanager.swing.ActionDialog
class ActionDialog extends PamDialog implements Serializable -
Class backupmanager.swing.FileBackupDialog
class FileBackupDialog extends PamDialog implements Serializable-
Serialized Fields
-
destination
FileLocationComponent destination
-
flParams
FileLocationParams flParams
-
source
FileLocationComponent source
-
-
-
Class backupmanager.swing.GenericBackupDialog
class GenericBackupDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
mainPanel
JPanel mainPanel
-
ok
boolean ok
-
panels
ArrayList<PamDialogPanel> panels
-
-
-
Package beamformer
-
Class beamformer.BeamAlgorithmParams
class BeamAlgorithmParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
algorithmName
String algorithmName
The name of the algorithm using these parameters. This should be the name returned by the getStaticProperties().getName() call to the algorithm provider object, in order to properly match up provider to parameters in BeamformerProcess. -
beamOGramAngles
int[] beamOGramAngles
A 3 element vector with the minimum azimuth angle (index 0), maximum azimuth angle (index 1), and step size (index 2) to use for the BeamOGram sweep. Initialises to 0deg to 180deg, with a 2 degree step. Note that the term azimuth is used for familiarity, and is appropriate for horizontal linear arrays. A more generic term would be main angle, in the direction of the primary array axis -
beamOGramFreqRange
double[] beamOGramFreqRange
A 2D array containing the frequency range to analyse. The array is of length 2 with index 0 = min freq and index 1 = max freq. If this array is null, it will default to the full frequency range available from the fft source. -
beamOGramSlants
int[] beamOGramSlants
A 3 element vector with the minimum slant angle (index 0), maximum slant angle (index 1), and step size (index 2) to use for the BeamOGram sweep. For a horizontal linear array, 0 deg is horizontal and -90 deg is straight down. Initialises to zero slant (0 deg x 0 deg x 1 deg step - step size cannot be 0 or else it will cause div-by-0 error later). Note that the term slant is used for familiarity, and is appropriate for horizontal linear arrays. A more generic term would be secondary angle, relative to the perpendicular to the array axis primary array axis. -
canBeam
boolean canBeam
whether or not this instance of the algorithm can/should allow the user to create individual beams. Defaults to true. -
canBeamogram
boolean canBeamogram
whether or not this instance of the algorithm can/should allow the user to create a beamogram. Defaults to true. -
channelMap
int channelMap
Channel map describing the channels (hydrophones) used in this group -
freqRange
double[][] freqRange
A 2D array containing the frequency range to analyse. The second array is of length 2 with index 0 = min freq and index 1 = max freq. The first array will have one index for each of the beams (i.e. [numBeams]). If this array is null, it will default to the full frequency range available from the fft source. -
groupNumber
int groupNumber
The group number these parameters are linked to -
headings
int[] headings
an array containing the beam headings, in degrees, where 0 = straight ahead and 180 = behind. The length of the array is numBeams. The term headings (aka azimuth) is used to make the variable easily recognisable for the most common type of hydrophones array, the linear horizontal array. A more generic term for this variable would be main angle, in the direction of the primary array axis -
numBeamogram
int numBeamogram
integer indicating the number of beamograms to create. Valid values are 0 (for no beamograms) or 1. Defaults to 0. -
numBeams
int numBeams
integer indicating how many individual beams are to be created. Defaults to 0. -
slants
int[] slants
an array containing the beam slant angles, in degrees, where 0 is horizontal and -90 = straight down. The length of the array is numBeams. The term slant angle is used to make the variable easily recognisable for the most common type of hydrophones array, the linear horizontal array. A more generic term for this variable would be secondary angle, relative to the perpendicular to the array axis primary array axis
-
-
Class beamformer.BeamFormerParams
class BeamFormerParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
algorithmParamsTable
HashMap<String,
BeamAlgorithmParams> algorithmParamsTable A Hashtable linking the algorithm name to the parameters object, so that we can pull up the algorithm-specific settings window. The key can take two forms: groupNum_groupChannelMap, to determine the last algorithm the user selected for that particular group number and group channel map, and algorithmName_groupNum_groupChannelMap to return the parameters for a specific group number, group channel map and algorithm. -
currentGroupAlgorithms
ArrayList<String> currentGroupAlgorithms
list of current algorithms used by each group. needed in order to get rid of the muddle over getting algorithm parameters with or without a name out of the algo parameters hash table. -
groupedSourceParameters
GroupedSourceParameters groupedSourceParameters
-
-
-
Package beamformer.algorithms.basicFreqDomain
-
Class beamformer.algorithms.basicFreqDomain.BasicFreqDomParams
class BasicFreqDomParams extends BeamAlgorithmParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
beamogramWeights
double[] beamogramWeights
2D array containing weights. The array is of length numElements, and holds weight values for each of the elements in the channelMap. -
weights
double[][] weights
2D array containing weights. The second array is of length numElements, and holds weight values for each of the elements in the channelMap. The first array will have one index for each of the beams to generate. -
windowTypes
int[] windowTypes
Array containing the type of window used for each set of beam weights. Numbers match the WindowFunction list, with an extra index value added at the end to indicate a custom list. Length of array is numBeams. NOTE: EXTRA VALUE NOT IMPLEMENTED YET. Will probably have to subclass the WindowFunction class to add an extra 'Custom' name at the end, and then figure out how to put it into the GUI. Not important enough right now, will leave this for v2
-
-
-
Package beamformer.algorithms.mvdr
-
Class beamformer.algorithms.mvdr.MVDRParams
class MVDRParams extends BeamAlgorithmParams implements Serializable- serialVersionUID:
- 1L
-
-
Package beamformer.algorithms.nullalgo
-
Class beamformer.algorithms.nullalgo.NullBeamParams
class NullBeamParams extends BeamAlgorithmParams implements Serializable- serialVersionUID:
- 1L
-
-
Package beamformer.localiser
-
Class beamformer.localiser.BFLocaliserParams
class BFLocaliserParams extends BeamFormerParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
detectionSource
String detectionSource
-
doAllGroups
boolean doAllGroups
Say to make additional data units and beam form ALL channel groups. -
fftHop
int fftHop
-
fftLength
int fftLength
-
-
-
Package beamformer.plot
-
Class beamformer.plot.BeamOGramPlotParams
class BeamOGramPlotParams extends PlotParams2D implements Serializable-
Serialized Fields
-
angleLimits
double[] angleLimits
-
-
-
-
Package bearinglocaliser
-
Class bearinglocaliser.BearingLocaliserParams
class BearingLocaliserParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
algorithmParamsTable
HashMap<String,
BearingAlgorithmParams> algorithmParamsTable -
currentAlgorithmNames
ArrayList<String> currentAlgorithmNames
-
detectionSource
String detectionSource
-
doAllGroups
boolean doAllGroups
Say to make additional data units and beam form ALL channel groups. -
fftHop
int fftHop
-
fftLength
int fftLength
-
rawOrFFTSourceParameters
GroupedSourceParameters rawOrFFTSourceParameters
-
-
-
Package bearinglocaliser.algorithms
-
Class bearinglocaliser.algorithms.BearingAlgorithmParams
class BearingAlgorithmParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
channelMap
int channelMap
Channel map describing the channels (hydrophones) used in this group -
groupNumber
int groupNumber
The group number these parameters are linked to
-
-
-
Package bearinglocaliser.beamformer
-
Class bearinglocaliser.beamformer.WrappedBeamFormParams
class WrappedBeamFormParams extends BearingAlgorithmParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
beamAlgorithmParams
BeamAlgorithmParams beamAlgorithmParams
-
-
-
Package bearinglocaliser.toad
-
Class bearinglocaliser.toad.TOADBearingParams
class TOADBearingParams extends BearingAlgorithmParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
bearingHeadings
int[] bearingHeadings
A 3 element vector with the minimum azimuth angle (index 0), maximum azimuth angle (index 1), and step size (index 2) to use for the bearing sweep. Initialises to 0deg to 180deg, with a 2 degree step. Note that the term azimuth is used for familiarity, and is appropriate for horizontal linear arrays. A more generic term would be main angle, in the direction of the primary array axis -
bearingSlants
int[] bearingSlants
A 3 element vector with the minimum slant angle (index 0), maximum slant angle (index 1), and step size (index 2) to use for the bearing sweep. For a horizontal linear array, 0 deg is horizontal and -90 deg is straight down. Initialises to zero slant (0 deg x 0 deg x 1 deg step - step size cannot be 0 or else it will cause div-by-0 error later). Note that the term slant is used for familiarity, and is appropriate for horizontal linear arrays. A more generic term would be secondary angle, relative to the perpendicular to the array axis primary array axis.
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-
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Package binaryFileStorage
-
Class binaryFileStorage.BinaryHeader
class BinaryHeader extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
analysisDate
long analysisDate
-
dataDate
long dataDate
-
extraInfo
byte[] extraInfo
-
fileStartSample
long fileStartSample
-
headerFormat
int headerFormat
-
headerLength
int headerLength
-
moduleName
String moduleName
-
moduleType
String moduleType
-
pamguard
String pamguard
-
pamguardBranch
String pamguardBranch
-
pamguardVersion
String pamguardVersion
-
streamName
String streamName
-
-
Class binaryFileStorage.BinaryMapMakingDialog
class BinaryMapMakingDialog extends PamDialog implements Serializable-
Serialized Fields
-
streamName
JLabel streamName
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streamProgress
JProgressBar streamProgress
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-
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Class binaryFileStorage.BinaryOfflineDataMapPoint
class BinaryOfflineDataMapPoint extends OfflineDataMapPoint implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
binaryFooter
BinaryFooter binaryFooter
-
binaryHeader
BinaryHeader binaryHeader
-
datagram
Datagram datagram
-
moduleFooter
ModuleFooter moduleFooter
-
moduleHeader
ModuleHeader moduleHeader
-
relativeURI
URI relativeURI
-
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Class binaryFileStorage.BinaryStorageDialog
class BinaryStorageDialog extends PamDialog implements Serializable-
Serialized Fields
-
binaryStorageDialogPanel
BinaryStorageDialogPanel binaryStorageDialogPanel
-
binaryStore
BinaryStore binaryStore
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binaryStoreSettings
BinaryStoreSettings binaryStoreSettings
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-
-
Class binaryFileStorage.BinaryStoreSettings
class BinaryStoreSettings extends Object implements Serializable- serialVersionUID:
- 0L
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Serialized Fields
-
autoNewFiles
boolean autoNewFiles
-
channelShift
int channelShift
Channel shift parameter for secondary binary storage units. Will always be zero for the main binary store. -
datedSubFolders
boolean datedSubFolders
-
fileSeconds
int fileSeconds
-
lastZippedFileDate
long lastZippedFileDate
-
limitFileSize
boolean limitFileSize
-
maxFileSize
int maxFileSize
-
noiseStoreType
NoiseStoreType noiseStoreType
-
storeLocation
String storeLocation
-
-
Class binaryFileStorage.ModuleHeader
class ModuleHeader extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
moduleVersion
int moduleVersion
-
-
Package binaryFileStorage.backup
-
Class binaryFileStorage.backup.BinaryBackupParams
class BinaryBackupParams extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
-
destLocation
FileLocation destLocation
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-
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Package cepstrum
-
Class cepstrum.CepstrumDialog
class CepstrumDialog extends PamDialog implements Serializable-
Serialized Fields
-
cepstrumParams
CepstrumParams cepstrumParams
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sourcePanel
SourcePanel sourcePanel
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-
-
Class cepstrum.CepstrumParams
class CepstrumParams extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
-
channelMap
int channelMap
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sourceDataBlock
String sourceDataBlock
-
-
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Package classifier
-
Class classifier.ClassifierParams
class ClassifierParams extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
-
classifierClass
Class classifierClass
-
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Class classifier.GroupMeans
class GroupMeans extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
groupMeans
Jama.Matrix groupMeans
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groupSize
int[] groupSize
-
uniqueGroups
int[] uniqueGroups
-
-
Class classifier.LinearClassifierParams
class LinearClassifierParams extends ClassifierParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
groupMeans
GroupMeans groupMeans
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logDetSigma
double logDetSigma
-
rMatrix
Jama.Matrix rMatrix
-
-
Class classifier.MahalanobisParams
class MahalanobisParams extends ClassifierParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
groupMeans
GroupMeans groupMeans
-
logDetSigma
double[] logDetSigma
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rInverse
Jama.Matrix[] rInverse
-
-
Class classifier.WekaClassifierParams
class WekaClassifierParams extends ClassifierParams implements Serializable- serialVersionUID:
- 2L
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Serialized Fields
-
classifier
weka.classifiers.AbstractClassifier classifier
-
-
Class classifier.WekaOptionsDialog
class WekaOptionsDialog extends PamDialog implements Serializable-
Serialized Fields
-
abstractWekaClassifier
AbstractWekaClassifier abstractWekaClassifier
-
argumentCount
int[] argumentCount
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checkBoxes
JCheckBox[] checkBoxes
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paramFields
JTextField[][] paramFields
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wekaClassifier
weka.classifiers.AbstractClassifier wekaClassifier
-
-
-
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Package clickDetector
-
Class clickDetector.BasicClickIdParameters
class BasicClickIdParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
clickTypeParams
ArrayList<ClickTypeParams> clickTypeParams
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-
Class clickDetector.BTDisplayParameters
class BTDisplayParameters extends Object implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
amplitudeRange
double[] amplitudeRange
-
amplitudeSelect
boolean amplitudeSelect
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angleRotation
int angleRotation
-
colourScheme
int colourScheme
-
displayChannels
int displayChannels
-
logICIScale
boolean logICIScale
-
maxClickHeight
int maxClickHeight
-
maxClickLength
int maxClickLength
-
maxICI
double maxICI
-
minClickHeight
int minClickHeight
-
minClickLength
int minClickLength
-
minICI
double minICI
-
nAmplitudeGridLines
int nAmplitudeGridLines
-
nBearingGridLines
int nBearingGridLines
-
nICIGridLines
int nICIGridLines
-
showKey
boolean showKey
-
showUnassignedICI
boolean showUnassignedICI
-
timeRange
double timeRange
-
trackedClickMarkers
boolean trackedClickMarkers
Show little markers for tracked click angles down the sides of the display -
view360
boolean view360
-
VScale
int VScale
-
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Class clickDetector.ClickAlarm
class ClickAlarm extends Object implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
Class clickDetector.ClickBinaryModuleHeader
class ClickBinaryModuleHeader extends ModuleHeader implements Serializable -
Class clickDetector.ClickDisplayManagerParameters
class ClickDisplayManagerParameters extends Object implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
initialised
boolean initialised
-
lastMode
int lastMode
-
nBTDisplays
int nBTDisplays
-
nConcatSpecDisplays
int nConcatSpecDisplays
-
nSpectrumDisplays
int nSpectrumDisplays
-
nTriggerDisplays
int nTriggerDisplays
-
nWaveDisplays
int nWaveDisplays
-
nWignerDisplays
int nWignerDisplays
-
-
Class clickDetector.ClickDisplayManagerParameters2
class ClickDisplayManagerParameters2 extends Object implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
initialised
boolean initialised
-
lastMode
int lastMode
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manualWindowSizes
boolean manualWindowSizes
-
nBTDisplays
int[] nBTDisplays
-
nConcatSpecDisplays
int[] nConcatSpecDisplays
-
nIDIHistogramDisplays
int[] nIDIHistogramDisplays
-
nSpectrumDisplays
int[] nSpectrumDisplays
-
nTriggerDisplays
int[] nTriggerDisplays
-
nWaveDisplays
int[] nWaveDisplays
-
nWignerDisplays
int[] nWignerDisplays
-
windowSizes
ArrayList<clickDetector.ClickDisplayManagerParameters2.WindowSizeData> windowSizes
-
-
Class clickDetector.ClickParameters
class ClickParameters extends Object implements Serializable- serialVersionUID:
- 8L
-
Serialized Fields
-
backgroundIntervalMillis
int backgroundIntervalMillis
Interval for storing background measurements. -
channelBitmap
int channelBitmap
Deprecated. -
channelGroups
int[] channelGroups
Deprecated. -
classifyOnline
boolean classifyOnline
Run classification in real time / online ops. -
clickAlarmList
ArrayList<ClickAlarm> clickAlarmList
-
clickClassifierType
int clickClassifierType
The type of classifier to use - CLASSIFY_SWEEP is the default. -
clickLocParams
ClickLocParams clickLocParams
Click localiser paramaters. -
createRCFile
boolean createRCFile
-
dbThreshold
double dbThreshold
-
defaultRange
double defaultRange
Deprecated. -
delayMeasurementParams
DelayMeasurementParams delayMeasurementParams
-
delayMeasurementTypeParams
Hashtable<Integer,
DelayMeasurementParams> delayMeasurementTypeParams -
discardEchoes
boolean discardEchoes
-
discardUnclassifiedClicks
boolean discardUnclassifiedClicks
-
groupedSourceParameters
GroupedSourceParameters groupedSourceParameters
-
groupingType
int groupingType
Deprecated. -
longFilter
double longFilter
-
longFilter2
double longFilter2
-
maxLength
int maxLength
-
minBearingSeparation
double minBearingSeparation
Deprecated. -
minSep
int minSep
-
minTimeSeparation
double minTimeSeparation
Deprecated. -
minTriggerChannels
int minTriggerChannels
Min number of channels that have to be triggered for a click to be read. -
noiseSampleInterval
double noiseSampleInterval
-
overlayMarkDataSelectorParams
MarkDataSelectorParams overlayMarkDataSelectorParams
-
plotIndividualBearings
boolean plotIndividualBearings
Deprecated. -
postSample
int postSample
-
preFilter
FilterParams preFilter
-
preSample
int preSample
-
publishTriggerFunction
boolean publishTriggerFunction
Make the trigger function output data available as raw data so it can be viewed. -
radarColour
int radarColour
How to colour clicks on radar displays (this will apply to all radars - not possible to do them individually at the moment). -
rawDataSource
String rawDataSource
Deprecated. -
rcAutoNewFile
boolean rcAutoNewFile
-
rcFileLength
float rcFileLength
-
runEchoOnline
boolean runEchoOnline
-
sampleNoise
boolean sampleNoise
-
shortFilter
double shortFilter
-
showShortTrains
int showShortTrains
Deprecated. -
singleWavePlot
boolean singleWavePlot
Single plot of waveforms on top of each other - rather than one per channel -
spectrogramColour
int spectrogramColour
How to colour clicks on spectrogram displays (this will apply to all radars - not possible to do them individually at the moment). -
storageDirectory
String storageDirectory
-
storageInitials
String storageInitials
-
storeBackground
boolean storeBackground
Store trigger background in binary stores -
triggerBitmap
int triggerBitmap
-
triggerFilter
FilterParams triggerFilter
-
viewFilteredWaveform
boolean viewFilteredWaveform
view a filtered waveform in the display -
waveFixedXScale
boolean waveFixedXScale
Stop auto scaling the x axis - fix it at the max click length. -
waveformFilterParams
FFTFilterParams waveformFilterParams
Parameters for waveform filter. -
waveShowEnvelope
boolean waveShowEnvelope
Show the envelope waveform
-
-
Class clickDetector.ClickRecorderTriggerData
class ClickRecorderTriggerData extends RecorderTriggerData implements Serializable- serialVersionUID:
- 1L
-
Class clickDetector.ClickSidePanel.SidePanel
class SidePanel extends PamBorderPanel implements Serializable -
Class clickDetector.ClickSpectrumDialog
class ClickSpectrumDialog extends PamDialog implements Serializable-
Serialized Fields
-
channelChoice
JComboBox channelChoice
-
clickSpectrum
ClickSpectrum clickSpectrum
-
clickSpectrumParams
ClickSpectrumParams clickSpectrumParams
-
isViewer
boolean isViewer
-
logRange
JTextField logRange
-
logScale
JCheckBox logScale
-
plotCepstrum
JRadioButton plotCepstrum
-
plotSpectrogram
JRadioButton plotSpectrogram
-
showEventInfo
JCheckBox showEventInfo
-
smoothBins
JTextField smoothBins
-
smoothData
JCheckBox smoothData
-
-
-
Class clickDetector.ClickSpectrumParams
class ClickSpectrumParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
channelChoice
int channelChoice
-
logRange
double logRange
-
logScale
boolean logScale
-
plotCepstrum
boolean plotCepstrum
-
plotSmoothing
int plotSmoothing
-
showEventInfo
boolean showEventInfo
-
smoothPlot
boolean smoothPlot
-
-
Class clickDetector.ClickSpectrumTemplateDialog
class ClickSpectrumTemplateDialog extends PamDialog implements Serializable-
Serialized Fields
-
browseButton
JButton browseButton
-
clickSpectrumTemplateParams
ClickSpectrumTemplateParams clickSpectrumTemplateParams
-
clickTemplate
ClickTemplate clickTemplate
-
clickTemplateFile
File clickTemplateFile
-
createButton
JButton createButton
-
parentFrame
Window parentFrame
-
previousFiles
ArrayList<String> previousFiles
-
templateFileLocation
SelectFolder templateFileLocation
-
templateList
JComboBox templateList
-
-
-
Class clickDetector.ClickSpectrumTemplateEditDialog
class ClickSpectrumTemplateEditDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
addTo
JButton addTo
-
averageFFT
double[] averageFFT
-
averageFFTLog
double[] averageFFTLog
-
channel
Integer channel
-
clearAll
JButton clearAll
-
clickControl
ClickControl clickControl
-
clickSpectrum
ClickSpectrum clickSpectrum
-
clickSpectrumTemplateParams
ClickSpectrumTemplateParams clickSpectrumTemplateParams
-
colour
JButton colour
-
confidenceIntervals
JCheckBoxMenuItem confidenceIntervals
-
confidenceIntervalsb
Boolean confidenceIntervalsb
-
fftColour
Color fftColour
-
load
JButton load
-
logMaximum
double logMaximum
-
logMinimum
double logMinimum
-
logScale
JCheckBoxMenuItem logScale
-
logScaleb
Boolean logScaleb
-
mainPanel
JSplitPane mainPanel
-
N
int N
-
offlineEventListPanel
OfflineEventListPanel offlineEventListPanel
-
parentFrame
Window parentFrame
-
sampleRate
float sampleRate
-
save
JButton save
-
selectedEvents
ArrayList<OfflineEventDataUnit> selectedEvents
-
species
String species
-
spectrumPlot
clickDetector.ClickSpectrumTemplateEditDialog.SpectrumPlotPanel spectrumPlot
-
stdFFT
double[] stdFFT
-
stdFFTLog
double[] stdFFTLog
-
tabbedPane
JTabbedPane tabbedPane
-
templateTable
clickDetector.ClickSpectrumTemplateEditDialog.TemplateTable templateTable
-
-
Class clickDetector.ClickSpectrumTemplateEditDialog.TemplateTable.CustomTableCellRenderer
class CustomTableCellRenderer extends DefaultTableCellRenderer implements Serializable- serialVersionUID:
- 1L
-
Class clickDetector.ClickSpectrumTemplateParams
class ClickSpectrumTemplateParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Class clickDetector.ClickTabPanel
class ClickTabPanel extends JDesktopPane implements Serializable-
Serialized Fields
-
clickControl
ClickControl clickControl
-
clickTabPanelControl
ClickTabPanelControl clickTabPanelControl
-
firstMaximise
boolean firstMaximise
-
resizeCount
int resizeCount
-
sampleRate
float sampleRate
-
-
-
Class clickDetector.ClickTypeParams
class ClickTypeParams extends ClickTypeCommonParams implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
band1Energy
double[] band1Energy
-
band1Freq
double[] band1Freq
-
band2Energy
double[] band2Energy
-
band2Freq
double[] band2Freq
-
bandEnergyDifference
double bandEnergyDifference
-
clickLength
double[] clickLength
-
lengthEnergyFraction
double lengthEnergyFraction
-
meanSelRange
double[] meanSelRange
-
meanSumRange
double[] meanSumRange
-
peakFrequencyRange
double[] peakFrequencyRange
-
peakFrequencySearch
double[] peakFrequencySearch
-
peakWidth
double[] peakWidth
-
symbol
PamSymbol symbol
-
whichSelections
int whichSelections
-
widthEnergyFraction
double widthEnergyFraction
-
-
Class clickDetector.ConcatenatedSpectParams
class ConcatenatedSpectParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
colourMap
ColourArray.ColourArrayType colourMap
-
logVal
boolean logVal
-
maxLogValS
double maxLogValS
-
normaliseAll
boolean normaliseAll
-
-
Class clickDetector.ConcatenatedSpectrogramdialog
class ConcatenatedSpectrogramdialog extends PamDialog implements Serializable-
Serialized Fields
-
colourList
JComboBox colourList
-
concatenatedSpectParams
ConcatenatedSpectParams concatenatedSpectParams
-
logRange
JTextField logRange
-
logScale
JCheckBox logScale
-
mainPanel
JPanel mainPanel
-
normalise
JCheckBox normalise
-
-
-
Class clickDetector.IDI_DisplayDialog
class IDI_DisplayDialog extends PamDialog implements Serializable-
Serialized Fields
-
highResIdiBinScale
JTextField highResIdiBinScale
Scale of Inter-Detection-Interval (IDI) bins in the high-resolution display, in milliseconds -
idiDisplay
IDI_Display idiDisplay
-
idiParams
IDI_DisplayParams idiParams
-
lowResIdiBinScale
JTextField lowResIdiBinScale
Scale of Inter-Detection-Interval (IDI) bins in the low-resolution display, in milliseconds -
maxHighCount
JTextField maxHighCount
highest histogram count in the high-resolution colour bar -
maxHighResBin
JTextField maxHighResBin
maximum IDI bin value in high-resolution display, in milliseconds -
maxLowCount
JTextField maxLowCount
highest histogram count in the low-resolution colour bar -
maxLowResBin
JTextField maxLowResBin
maximum IDI bin value in low-resolution display, in milliseconds -
maxTimeBin
JTextField maxTimeBin
maximum time bin value, in milliseconds -
outputButton
JCheckBox outputButton
checkbox to select output file -
outputDirectoryButton
JButton outputDirectoryButton
Jbutton for selecting output file -
outputDirTxt
JTextField outputDirTxt
textbox displaying the output filename, including path -
timeBinScale
JTextField timeBinScale
Size of time bins, in milliseconds
-
-
-
Class clickDetector.IDI_DisplayParams
class IDI_DisplayParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
highResIdiBinScale
int highResIdiBinScale
Scale of Inter-Detection-Interval (IDI) bins in the high-resolution display, in milliseconds -
lowResIdiBinScale
int lowResIdiBinScale
Scale of Inter-Detection-Interval (IDI) bins in the low-resolution display, in milliseconds -
maxHighCount
int maxHighCount
highest histogram count in the high-resolution colour bar -
maxHighResBin
int maxHighResBin
maximum IDI bin value in high-resolution display, in milliseconds -
maxLowCount
int maxLowCount
highest histogram count in the low-resolution colour bar -
maxLowResBin
int maxLowResBin
maximum IDI bin value in low-resolution display, in milliseconds -
maxTimeBin
int maxTimeBin
maximum time bin value, in milliseconds (default 5 minutes) -
outputFilename
File outputFilename
output filename -
saveOutput
boolean saveOutput
boolean indicating whether or not we're saving the data -
timeBinScale
int timeBinScale
Size of time bins, in milliseconds (default 20 seconds)
-
-
Class clickDetector.WignerPlotdialog
class WignerPlotdialog extends PamDialog implements Serializable-
Serialized Fields
-
fftLengthData
JTextField fftLengthData
-
fftLengthModel
FFTLengthModel fftLengthModel
-
fftLengthSpinner
JSpinner fftLengthSpinner
-
limitLength
JCheckBox limitLength
-
wignerPlotOptions
WignerPlotOptions wignerPlotOptions
-
-
-
Class clickDetector.WignerPlotOptions
class WignerPlotOptions extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
limitLength
boolean limitLength
-
manualLength
int manualLength
-
-
-
Package clickDetector.alarm
-
Class clickDetector.alarm.ClickAlarmDialog
class ClickAlarmDialog extends PamDialog implements Serializable-
Serialized Fields
-
clickAlarmParameters
ClickAlarmParameters clickAlarmParameters
-
clickControl
ClickControl clickControl
-
speciesPanel
clickDetector.alarm.ClickAlarmDialog.SpeciesPanel speciesPanel
-
-
-
Class clickDetector.alarm.ClickAlarmParameters
class ClickAlarmParameters extends DataSelectParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
clicksOREvents
boolean clicksOREvents
-
eventTypes
Hashtable<String,
Boolean> eventTypes -
minICIMillis
int minICIMillis
-
minimumAmplitude
double minimumAmplitude
-
onlineAutoEvents
boolean onlineAutoEvents
-
onlineManualEvents
boolean onlineManualEvents
-
scoreByAmplitude
boolean scoreByAmplitude
-
speciesWeightings
double[] speciesWeightings
-
unassignedEvents
boolean unassignedEvents
-
useEchoes
boolean useEchoes
-
useSpeciesList
boolean[] useSpeciesList
-
-
-
Package clickDetector.ClickClassifiers
-
Class clickDetector.ClickClassifiers.ClickClassifyDialog
class ClickClassifyDialog extends PamDialog implements Serializable-
Serialized Fields
-
classifierDialogPanel
ClassifyDialogPanel classifierDialogPanel
-
classifierSpecificContainer
JPanel classifierSpecificContainer
-
classifyOnline
JCheckBox classifyOnline
-
clickControl
ClickControl clickControl
-
clickParameters
ClickParameters clickParameters
-
currentIdentifier
ClickIdentifier currentIdentifier
-
discardUnclassified
JCheckBox discardUnclassified
-
mainPanel
JPanel mainPanel
-
parentFrame
Frame parentFrame
-
typeList
JComboBox typeList
-
-
-
Class clickDetector.ClickClassifiers.ClickTypeCommonParams
class ClickTypeCommonParams extends Object implements Serializable- serialVersionUID:
- -6002534290706863277L
-
Serialized Fields
-
alarm
ClickAlarm alarm
Alarm to be used for detection -
alarmEnabled
Boolean alarmEnabled
boolean indicating whether or not the alarm has been enabled -
discard
Boolean discard
True to discard classified clicks insteac of calssifiying them. -
maxTime
long maxTime
the maximum amount of time allowed (in milliseconds) between clicks to still be counted as a detection (for alarm purposes) -
name
String name
The name of the classifier -
prevTime
long prevTime
the time (in milliseconds) of the previous detection -
speciesCode
int speciesCode
The species code of the classifier
-
-
Class clickDetector.ClickClassifiers.ClickTypesDialog
class ClickTypesDialog extends PamDialog implements Serializable-
Serialized Fields
-
basicClickIdParameters
BasicClickIdParameters basicClickIdParameters
-
columnNames
String[] columnNames
-
deleteButton
JButton deleteButton
-
downButton
JButton downButton
-
editButton
JButton editButton
-
newButton
JButton newButton
-
runOnline
JCheckBox runOnline
-
sampleRate
float sampleRate
-
tableData
clickDetector.ClickClassifiers.ClickTypesDialog.ClickTypesTableData tableData
-
typesTable
JTable typesTable
-
upButton
JButton upButton
-
-
-
-
Package clickDetector.ClickClassifiers.basic
-
Class clickDetector.ClickClassifiers.basic.ClickTypeDialog
class ClickTypeDialog extends PamDialog implements Serializable-
Serialized Fields
-
alarmChooser
JComboBox alarmChooser
ComboBox to list available alarms -
alarmPanel
clickDetector.ClickClassifiers.basic.ClickTypeDialog.AlarmPanel alarmPanel
-
band1Energy
JTextField[] band1Energy
-
band1Freq
JTextField[] band1Freq
-
band2Energy
JTextField[] band2Energy
-
band2Freq
JTextField[] band2Freq
-
bandEnergyDifference
JTextField bandEnergyDifference
-
basicClickIdParameters
BasicClickIdParameters basicClickIdParameters
-
clickControl
ClickControl clickControl
-
clickLength
JTextField[] clickLength
-
clickTypeParams
ClickTypeParams clickTypeParams
-
code
JTextField code
-
enableBoxes
JCheckBox[] enableBoxes
-
energyPanel
clickDetector.ClickClassifiers.basic.ClickTypeDialog.EnergyPanel energyPanel
-
filtersButton
JButton filtersButton
-
lengthEnergyFraction
JTextField lengthEnergyFraction
-
lengthPanel
clickDetector.ClickClassifiers.basic.ClickTypeDialog.LengthPanel lengthPanel
-
maxTime
JTextField maxTime
Maximum amount of elapsed time between detections to ring the alarm -
meanFreqPanel
clickDetector.ClickClassifiers.basic.ClickTypeDialog.MeanFreqPanel meanFreqPanel
-
meanSelRange
JTextField[] meanSelRange
-
meanSumRange
JTextField[] meanSumRange
-
name
JTextField name
-
peakFrequencyRange
JTextField[] peakFrequencyRange
-
peakFrequencySearch
JTextField[] peakFrequencySearch
-
peakPanel
clickDetector.ClickClassifiers.basic.ClickTypeDialog.PeakPanel peakPanel
-
peakWidth
JTextField[] peakWidth
-
symbolPanel
clickDetector.ClickClassifiers.basic.ClickTypeDialog.SymbolPanel symbolPanel
-
symbolTypeButton
JButton symbolTypeButton
-
typeMenu
JPopupMenu typeMenu
-
widthEnergyFraction
JTextField widthEnergyFraction
-
-
-
-
Package clickDetector.ClickClassifiers.basicSweep
-
Class clickDetector.ClickClassifiers.basicSweep.CodeSpinnerModel
class CodeSpinnerModel extends AbstractSpinnerModel implements Serializable-
Serialized Fields
-
codehost
CodeHost codehost
-
sweepClassifier
SweepClassifier sweepClassifier
-
-
-
Class clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog
class SweepClassifierDialog extends PamDialog implements Serializable-
Serialized Fields
-
alarmBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.AlarmBlock alarmBlock
-
alarmChooser
JComboBox alarmChooser
ComboBox to list available alarms -
amplitudeBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.AmplitudeBlock amplitudeBlock
-
bearingBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.BearingBlock bearingBlock
-
classifierItemRow
int classifierItemRow
Need to check we're not refusing to allow to keep the same code ! -
clickControl
ClickControl clickControl
-
dbTextLength
int dbTextLength
-
energyBandsBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.EnergyBandsBlock energyBandsBlock
-
exportButton
JButton exportButton
-
filterBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.FilterBlock filterBlock
-
freqTextLength
int freqTextLength
-
idBlocks
ArrayList<clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.IdBlock> idBlocks
-
importButton
JButton importButton
-
importExport
ImportExport importExport
-
lengthBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.LengthBlock lengthBlock
-
maxTime
JTextField maxTime
Maximum amount of elapsed time between detections to ring the alarm -
optionsBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.OptionsBlock optionsBlock
-
peakFreqBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.PeakFreqBlock peakFreqBlock
-
sweepClassifier
SweepClassifier sweepClassifier
-
sweepClassifierSet
SweepClassifierSet sweepClassifierSet
-
xCorrBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.XCorrBlock xCorrBlock
-
zeroXBlock
clickDetector.ClickClassifiers.basicSweep.SweepClassifierDialog.ZeroXBlock zeroXBlock
-
-
-
Class clickDetector.ClickClassifiers.basicSweep.SweepClassifierParameters
class SweepClassifierParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
checkAllClassifiers
boolean checkAllClassifiers
Test a click with all classifiers and add an add an annotation to the click with info on all classifiers it passed. -
classifierSets
Vector<SweepClassifierSet> classifierSets
-
-
Class clickDetector.ClickClassifiers.basicSweep.SweepClassifierSet
class SweepClassifierSet extends ClickTypeCommonParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
activeVersion
int activeVersion
-
amplitudeRange
double[] amplitudeRange
-
bearingLims
double[] bearingLims
-
channelChoices
int channelChoices
-
controlEnergyBand
double[][] controlEnergyBand
-
corrFactor
double corrFactor
-
discard
boolean discard
Deprecated. -
enable
boolean enable
-
enableBearingLims
boolean enableBearingLims
-
enableEnergyBands
boolean enableEnergyBands
-
enableFFTFilter
boolean enableFFTFilter
-
enableLength
boolean enableLength
-
enableMean
boolean enableMean
-
enableMinXCrossCorr
boolean enableMinXCrossCorr
-
enablePeak
boolean enablePeak
-
enablePeakXCorr
boolean enablePeakXCorr
-
enableSweep
boolean enableSweep
-
enableWidth
boolean enableWidth
-
enableZeroCrossings
boolean enableZeroCrossings
-
energyThresholds
double[] energyThresholds
-
excludeBearingLims
boolean excludeBearingLims
-
fftFilterParams
FFTFilterParams fftFilterParams
-
lengthdB
double lengthdB
-
lengthSmoothing
int lengthSmoothing
-
maxLength
double maxLength
-
meanRange
double[] meanRange
-
minCorr
double minCorr
-
minLength
double minLength
-
name
String name
Deprecated.These next three parameters have been moved to a super class. However, for data to deserialise correctly, they need to be left in place and set when data are read back in ... -
nCrossings
int[] nCrossings
-
peakRange
double[] peakRange
-
peakSearchRange
double[] peakSearchRange
-
peakSmoothing
int peakSmoothing
-
peakWidthRange
double[] peakWidthRange
-
peakWidthThreshold
double peakWidthThreshold
-
restrictedBins
int restrictedBins
-
restrictedBinstype
int restrictedBinstype
The type of length restriction. O is around the click sensor and 1 is a simple trim from the start of the click. -
restrictLength
boolean restrictLength
-
speciesCode
int speciesCode
Deprecated. -
symbol
PamSymbol symbol
-
testAmplitude
boolean testAmplitude
-
testEnergyBand
double[] testEnergyBand
-
zcSweep
double[] zcSweep
-
-
-
Package clickDetector.clicktrains
-
Class clickDetector.clicktrains.ClickTrainIdParams
class ClickTrainIdParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
dataVersion
int dataVersion
-
iciRange
double[] iciRange
-
iciUpdateRatio
double iciUpdateRatio
-
initialPerpendicularDistance
double initialPerpendicularDistance
-
maxIciChange
double maxIciChange
-
minAngleChange
double minAngleChange
-
minTrainClicks
int minTrainClicks
-
minUpdateGap
int minUpdateGap
-
okAngleError
double okAngleError
-
runClickTrainId
boolean runClickTrainId
-
-
-
Package clickDetector.dataSelector
-
Class clickDetector.dataSelector.ClickTrainDataSelect2Params
class ClickTrainDataSelect2Params extends DataSelectParams implements Serializable- serialVersionUID:
- 1L
-
Class clickDetector.dataSelector.ClickTrainSelectParameters
class ClickTrainSelectParameters extends DataSelectParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
defaultRange
double defaultRange
-
minBearingSeparation
double minBearingSeparation
-
minTimeSeparation
double minTimeSeparation
-
plotIndividualBearings
boolean plotIndividualBearings
-
showAutoTrains
boolean showAutoTrains
-
showManualTrains
boolean showManualTrains
-
showShortTrains
int showShortTrains
-
-
-
Package clickDetector.dialogs
-
Class clickDetector.dialogs.ClickAlarmDialog
class ClickAlarmDialog extends PamDialog implements Serializable-
Serialized Fields
-
addAlarm
JButton addAlarm
Buttons -
alarmChooser
JComboBox alarmChooser
Combo box for the alarm list -
alarmFileTxt
JTextField alarmFileTxt
Text field with the name of the user-selected alarm -
alarmList
String[] alarmList
Array list containing the alarms -
browseFiles
JButton browseFiles
Buttons -
buttonGroup
ButtonGroup buttonGroup
button group holding the radio buttons -
clickParameters
ClickParameters clickParameters
The parameters object -
currentAlarm
ClickAlarm currentAlarm
current alarm in the combo box -
defaultAlarm
JRadioButton defaultAlarm
Radio buttons allowing user to select default or other alarm -
fc
JFileChooser fc
JFileChooser for selecting the user-defined sound file -
removeAlarm
JButton removeAlarm
Buttons -
renameAlarm
JButton renameAlarm
Buttons -
userAlarm
JRadioButton userAlarm
Radio buttons allowing user to select default or other alarm
-
-
-
Class clickDetector.dialogs.ClickDelayDialog
class ClickDelayDialog extends PamDialog implements Serializable-
Serialized Fields
-
clickControl
ClickControl clickControl
-
clickDelayPanel
ClickDelayPanel clickDelayPanel
-
clickParameters
ClickParameters clickParameters
-
-
-
Class clickDetector.dialogs.ClickDisplayDialog
class ClickDisplayDialog extends PamDialog implements Serializable-
Serialized Fields
-
amplitudeRange0
JTextField amplitudeRange0
-
amplitudeRange1
JTextField amplitudeRange1
-
angleTypes
JComboBox<String> angleTypes
-
btDisplayParameters
BTDisplayParameters btDisplayParameters
-
btPanel
clickDetector.dialogs.ClickDisplayDialog.BTPanel btPanel
-
clickControl
ClickControl clickControl
-
clickSelectParams
ClickAlarmParameters clickSelectParams
-
hGridiLines
JTextField hGridiLines
-
logICIScale
JCheckBox logICIScale
-
maxICI
JTextField maxICI
-
minICI
JTextField minICI
-
showAmplitude
JRadioButton showAmplitude
-
showBearing
JRadioButton showBearing
-
showEchoes
JCheckBox showEchoes
-
showICI
JRadioButton showICI
-
showSlant
JRadioButton showSlant
-
showUnassignedICI
JCheckBox showUnassignedICI
-
sizePanel
clickDetector.dialogs.ClickDisplayDialog.SizePanel sizePanel
-
speciesPanel
clickDetector.dialogs.ClickDisplayDialog.SpeciesPanel speciesPanel
-
trackedClickMarkers
JCheckBox trackedClickMarkers
-
view360
JCheckBox view360
-
-
-
Class clickDetector.dialogs.ClickMapDialog
class ClickMapDialog extends PamDialog implements Serializable-
Serialized Fields
-
clickParameters
ClickParameters clickParameters
Deprecated. -
individualBearings
JCheckBox individualBearings
Deprecated. -
lineLength
JTextField lineLength
Deprecated. -
minTheta
JTextField minTheta
Deprecated. -
minTime
JTextField minTime
Deprecated. -
showAll
JRadioButton showAll
Deprecated. -
showNone
JRadioButton showNone
Deprecated. -
showSome
JRadioButton showSome
Deprecated.
-
-
-
Class clickDetector.dialogs.ClickParamsDialog
class ClickParamsDialog extends PamDialog implements Serializable-
Serialized Fields
-
cancelButton
JButton cancelButton
-
clickControl
ClickControl clickControl
-
clickDelayPanel
ClickDelayPanel clickDelayPanel
-
clickParameters
ClickParameters clickParameters
-
echoDialogPanel
EchoDialogPanel echoDialogPanel
-
echoPanel
clickDetector.dialogs.ClickParamsDialog.EchoPanel echoPanel
-
lengthPanel
clickDetector.dialogs.ClickParamsDialog.LengthPanel lengthPanel
-
longFilter
JTextField longFilter
-
longFilter2
JTextField longFilter2
-
maxLength
JTextField maxLength
-
minSep
JTextField minSep
-
minTriggerChannels
JTextField minTriggerChannels
-
noisePanel
clickDetector.dialogs.ClickParamsDialog.NoisePanel noisePanel
-
okButton
JButton okButton
-
postSample
JTextField postSample
-
preSample
JTextField preSample
-
shortFilter
JTextField shortFilter
-
sourcePanel
GroupedSourcePanel sourcePanel
-
threshold
JTextField threshold
-
triggerList
JCheckBox[] triggerList
-
triggerPanel
clickDetector.dialogs.ClickParamsDialog.TriggerPanel triggerPanel
-
-
-
Class clickDetector.dialogs.ClickStorageOptionsDialog
class ClickStorageOptionsDialog extends PamDialog implements Serializable-
Serialized Fields
-
browseDirectory
JButton browseDirectory
-
clickParameters
ClickParameters clickParameters
-
createRCFile
JCheckBox createRCFile
-
fc
JFileChooser fc
-
rcAutoNewFile
JCheckBox rcAutoNewFile
-
rcFileLength
JTextField rcFileLength
-
storageDirectory
JTextField storageDirectory
-
storageInitials
JTextField storageInitials
-
-
-
Class clickDetector.dialogs.ClickTrainIdDialog
class ClickTrainIdDialog extends PamDialog implements Serializable-
Serialized Fields
-
angleError
JTextField angleError
-
clickTrainIdParams
ClickTrainIdParams clickTrainIdParams
-
iciChange
JTextField iciChange
-
iciRange
JTextField[] iciRange
-
minAngleChange
JTextField minAngleChange
-
minTrainClicks
JTextField minTrainClicks
-
minUpdateGap
JTextField minUpdateGap
-
runClickTrainId
JCheckBox runClickTrainId
-
-
-
Class clickDetector.dialogs.OverlayOptionsDialog
class OverlayOptionsDialog extends PamDialog implements Serializable-
Serialized Fields
-
clickParameters
ClickParameters clickParameters
-
radarColours
ClickColoursPanel radarColours
-
specColours
ClickColoursPanel specColours
-
-
-
Class clickDetector.dialogs.WaveDisplayDialog
class WaveDisplayDialog extends PamDialog implements Serializable-
Serialized Fields
-
clickParameters
ClickParameters clickParameters
-
clickWaveform
ClickWaveform clickWaveform
-
filterSettings
JButton filterSettings
-
fixedXScale
JCheckBox fixedXScale
-
separatePlots
JRadioButton separatePlots
-
showEnvelope
JCheckBox showEnvelope
-
singlePlot
JRadioButton singlePlot
-
viewFiltered
JCheckBox viewFiltered
-
-
-
-
Package clickDetector.echoDetection
-
Class clickDetector.echoDetection.EchoDialog
class EchoDialog extends PamDialog implements Serializable-
Serialized Fields
-
echoDetectionSystem
EchoDetectionSystem echoDetectionSystem
-
echoDialogPanel
EchoDialogPanel echoDialogPanel
-
-
-
Class clickDetector.echoDetection.JamieEchoParams
class JamieEchoParams extends Object implements Serializable- serialVersionUID:
- 3L
-
Serialized Fields
-
maxAmpDifference
double maxAmpDifference
-
maxICIDifference
double maxICIDifference
-
maxIntervalSeconds
double maxIntervalSeconds
-
-
Class clickDetector.echoDetection.SimpleEchoParams
class SimpleEchoParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
maxIntervalSeconds
double maxIntervalSeconds
-
-
-
Package clickDetector.localisation
-
Class clickDetector.localisation.ClickLocalisationDialog
class ClickLocalisationDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
clickGroupLocaliser
ClickGroupLocaliser clickGroupLocaliser
-
clickLocDialogPanel
ClickLocDialogPanel clickLocDialogPanel
-
okPressed
boolean okPressed
-
-
Class clickDetector.localisation.ClickLocParams
class ClickLocParams extends Object implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
internalVersion
int internalVersion
-
isSelected
boolean[] isSelected
The selected localiser. -
limitLocPoints
boolean limitLocPoints
Put a limit on the maximum number of points to localise -
maxHeight
double maxHeight
The minimum depth (max height because that's the system we use in PAMGuard) in meters -
maxLocPoints
int maxLocPoints
Maximum number of points to localise -
maxRange
double maxRange
The maximum range in meters -
maxTime
long maxTime
The maximum time inb millis before a warning is shown -
minHeight
double minHeight
The maximum depth (min height because that's the system we use in PAMGuard) in meters
-
-
-
Package clickDetector.offlineFuncs
-
Class clickDetector.offlineFuncs.DatabaseCheckDialog
class DatabaseCheckDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
cancelButton
JButton cancelButton
-
check
JRadioButton check
-
checkAndFix
JRadioButton checkAndFix
-
clickControl
ClickControl clickControl
-
isRunning
boolean isRunning
-
okButton
JButton okButton
-
stopChecks
boolean stopChecks
-
taskProgress
JProgressBar taskProgress
-
taskText
JTextField taskText
-
textOutput
JTextArea textOutput
-
-
Class clickDetector.offlineFuncs.EditOfflineEventDialog
class EditOfflineEventDialog extends PamDialog implements Serializable-
Serialized Fields
-
eventNo
JTextField eventNo
-
offlineEventDataUnit
OfflineEventDataUnit offlineEventDataUnit
-
-
-
Class clickDetector.offlineFuncs.EventListDialog
class EventListDialog extends PamDialog implements Serializable-
Serialized Fields
-
clickControl
ClickControl clickControl
-
mainPanel
JPanel mainPanel
-
offlineEventDataBlock
OfflineEventDataBlock offlineEventDataBlock
-
offlineEventListPanel
OfflineEventListPanel offlineEventListPanel
-
parentFrame
Window parentFrame
-
-
-
Class clickDetector.offlineFuncs.LabelClicksDialog
class LabelClicksDialog extends PamDialog implements Serializable-
Serialized Fields
-
clickControl
ClickControl clickControl
-
markedClicks
List<PamDataUnit> markedClicks
-
newEventButton
JButton newEventButton
-
offlineEventDataBlock
OfflineEventDataBlock offlineEventDataBlock
-
offlineEventListPanel
OfflineEventListPanel offlineEventListPanel
-
overlayMark
OverlayMark overlayMark
-
parentFrame
Window parentFrame
-
selectedEvent
OfflineEventDataUnit selectedEvent
-
singleClick
ClickDetection singleClick
-
-
-
Class clickDetector.offlineFuncs.OfflienEventViewer
class OfflienEventViewer extends PamDialog implements Serializable-
Serialized Fields
-
clickControl
ClickControl clickControl
-
offlineEventListPanel
OfflineEventListPanel offlineEventListPanel
-
-
-
Class clickDetector.offlineFuncs.OfflineEventDialog
class OfflineEventDialog extends PamDialog implements Serializable-
Serialized Fields
-
bestNum
JTextField bestNum
-
clickControl
ClickControl clickControl
-
colourButton
JButton colourButton
-
commentText
DBTextArea commentText
-
eventNumber
JTextField eventNumber
-
maxNum
JTextField maxNum
-
minNum
JTextField minNum
-
offlineEventDataUnit
OfflineEventDataUnit offlineEventDataUnit
-
speciesList
LookupComponent speciesList
-
-
-
Class clickDetector.offlineFuncs.OfflineEventViewer
class OfflineEventViewer extends PamDialog implements Serializable-
Serialized Fields
-
clickControl
ClickControl clickControl
-
offlineEventListPanel
OfflineEventListPanel offlineEventListPanel
-
-
-
Class clickDetector.offlineFuncs.OfflineParameters
class OfflineParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
analSelection
int analSelection
-
doClickId
boolean doClickId
-
-
-
Package clickDetector.offlineFuncs.rcImport
-
Class clickDetector.offlineFuncs.rcImport.BatchRainbowFileConversion
class BatchRainbowFileConversion extends PamDialog implements Serializable-
Serialized Fields
-
binaryStorageDialogPanel
BinaryStorageDialogPanel binaryStorageDialogPanel
-
binaryStore
BinaryStore binaryStore
-
binaryStoreSettings
BinaryStoreSettings binaryStoreSettings
-
clickBinaryDataSource
ClickBinaryDataSource clickBinaryDataSource
-
clickControl
ClickControl clickControl
-
clickDetector
ClickDetector clickDetector
-
clickParameters
ClickParameters clickParameters
-
conversionWorker
clickDetector.offlineFuncs.rcImport.BatchRainbowFileConversion.ConversionWorker conversionWorker
-
databaseBrowse
JButton databaseBrowse
-
databaseName
JTextField databaseName
-
importDatabase
AbstractButton importDatabase
-
rainbowFileMap
RainbowFileMap rainbowFileMap
-
rainbowFolder
SelectFolder rainbowFolder
-
rcFolderName
String rcFolderName
-
rcSubFolders
boolean rcSubFolders
-
readProgress
JProgressBar readProgress
-
readText
JLabel readText
-
stopFlag
boolean stopFlag
-
writeProgress
JProgressBar writeProgress
-
writeText
JLabel writeText
-
-
-
Class clickDetector.offlineFuncs.rcImport.RainbowDatabaseConversion
class RainbowDatabaseConversion extends PamDialog implements Serializable-
Serialized Fields
-
binaryStore
BinaryStore binaryStore
-
clickControl
ClickControl clickControl
-
clicksOffline
ClicksOffline clicksOffline
-
conWorker
clickDetector.offlineFuncs.rcImport.RainbowDatabaseConversion.ConvertWorker conWorker
-
databaseBrowse
JButton databaseBrowse
-
databaseName
JTextField databaseName
-
dbConverter
RainbowDatabseConverter dbConverter
-
importDatabase
JCheckBox importDatabase
-
progressBar
JProgressBar progressBar
-
progressText
JLabel progressText
-
stopNow
boolean stopNow
-
-
-
-
Package clickDetector.tdPlots
-
Class clickDetector.tdPlots.ClickSymbolOptions
class ClickSymbolOptions extends StandardSymbolOptions implements Serializable- serialVersionUID:
- 1L
-
-
Package clickDetector.waveCorrector
-
Class clickDetector.waveCorrector.WaveCorrector
class WaveCorrector extends PamDialog implements Serializable-
Serialized Fields
-
channels
int[] channels
-
click
ClickDetection click
-
clickControl
ClickControl clickControl
-
correlationAxes
clickDetector.waveCorrector.WaveCorrector.CorrelationAxes correlationAxes
-
correlationPlot
clickDetector.waveCorrector.WaveCorrector.CorrelationPlot correlationPlot
-
correlations
Correlations correlations
-
corrFunction
double[] corrFunction
-
currC
JLabel currC
-
currDelay
JLabel currDelay
-
currS
JLabel currS
-
currT
JLabel currT
-
interpolatedMaxima
double[][] interpolatedMaxima
-
markLength
int markLength
-
maxC
JLabel maxC
-
maxDelay
JLabel maxDelay
-
maxS
JLabel maxS
-
maxT
JLabel maxT
-
maxTime
double maxTime
-
preferredSize
Dimension preferredSize
-
returnValue
Boolean returnValue
-
sampleRate
double sampleRate
-
setMaxButton
JButton setMaxButton
-
timeOffset
double timeOffset
-
waveformAxes
clickDetector.waveCorrector.WaveCorrector.WaveformAxes waveformAxes
-
waveformPlot
clickDetector.waveCorrector.WaveCorrector.WaveformPlot waveformPlot
-
waveMax
double waveMax
-
waves
double[][] waves
-
waveStarts
int[] waveStarts
-
-
-
-
Package clickTrainDetector
-
Class clickTrainDetector.ClickTrainParams
class ClickTrainParams extends Object implements Serializable- serialVersionUID:
- 8L
-
Serialized Fields
-
channelGroups
int[] channelGroups
The channel groups to be used in the click train detector. -
ctClassifierParams
CTClassifierParams[] ctClassifierParams
A list of classification parameters for each classifier. -
ctDetectorType
int ctDetectorType
The selected type of click train detector. -
ctLocParams
CTLocParams ctLocParams
Localisation parameters for the click train localisation. (target motion and summary bearing info) -
dataSourceIndex
int dataSourceIndex
The index of the data source. -
dataSourceName
String dataSourceName
The data source name. -
runClassifier
boolean runClassifier
Run the click train classifier. -
simpleCTClassifier
Chi2ThresholdParams simpleCTClassifier
A simple initial classifier which junks click trains below a certain length and above a certain chi2 value. This ensure that not all clicks are saved to the database which would take up a lot of storage and possibly destabilise PAMGuard. It also ensure that enough click trains are saved so that species classifiers can be tweaked. -
useDataSelector
boolean useDataSelector
True to use the data selector to pre filter clicks
-
-
-
Package clickTrainDetector.classification
-
Class clickTrainDetector.classification.CTClassifierParams
class CTClassifierParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
classifierName
String classifierName
The name of the classifier. -
speciesFlag
int speciesFlag
A very simple species flag to indicate what classifier was used. 0 means not classified. -
type
CTClassifierType type
Easy way to know which classifier the parameter class belong to rather than big instance of statement -
uniqueID
String uniqueID
A unique ID for the classifier that never changes. This is important for accessing data selectors.
-
-
-
Package clickTrainDetector.classification.bearingClassifier
-
Class clickTrainDetector.classification.bearingClassifier.BearingClassifierParams
class BearingClassifierParams extends CTClassifierParams implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
bearingLimMax
double bearingLimMax
The maximum limit in which the classifier works. -
bearingLimMin
double bearingLimMin
The minimum bearing limits in which the classifier works -
maxMeanBearingD
double maxMeanBearingD
The minimum mean bearing derivative (radian/second) -
maxMedianBearingD
double maxMedianBearingD
The minimum mean bearing derivative (radian/second) -
maxStdBearingD
double maxStdBearingD
The minimum standard deviation in bearing derivative (radian/second) -
minMeanBearingD
double minMeanBearingD
The minimum mean bearing derivative (radian/second) -
minMedianBearingD
double minMedianBearingD
The minimum mean bearing derivative (radian/second) -
minStdBearingD
double minStdBearingD
The minimum standard deviation in bearing derivative (radian/second) -
speciesFlag
int speciesFlag
The default species flag. -
useMean
boolean useMean
Bearing derivatives (in radians per second) -
useMedian
boolean useMedian
-
useStD
boolean useStD
True to consider
-
-
-
Package clickTrainDetector.classification.idiClassifier
-
Class clickTrainDetector.classification.idiClassifier.IDIClassifierParams
class IDIClassifierParams extends CTClassifierParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
maxMeanIDI
Double maxMeanIDI
The maximum median ICI -
maxMedianIDI
Double maxMedianIDI
The maximum median ICI -
maxStdIDI
Double maxStdIDI
The maximum standard deviation in ICI -
minMeanIDI
Double minMeanIDI
The minimum median ICI. -
minMedianIDI
Double minMedianIDI
The minimim median ICI. -
minStdIDI
Double minStdIDI
The minimum standard deviation in ICI. -
useMeanIDI
boolean useMeanIDI
Use the mean ICI measurements. -
useMedianIDI
boolean useMedianIDI
Use the median ICI measurements -
useStdIDI
boolean useStdIDI
Use the mean ICI measurements
-
-
-
Package clickTrainDetector.classification.simplechi2classifier
-
Class clickTrainDetector.classification.simplechi2classifier.Chi2ThresholdParams
class Chi2ThresholdParams extends CTClassifierParams implements Serializable- serialVersionUID:
- 3L
-
Serialized Fields
-
chi2Threshold
double chi2Threshold
The chi2 threshold to set. This is the chi2 value divided by the number of clicks in the train. If zero then the classification always passes...A bit of a hack for testing -
minClicks
int minClicks
The minimum number of clicks. -
minPercentage
double minPercentage
The minimum %percentage which must the parent data selector of clicks/ . values are 0-1. -
minTime
double minTime
The minimum time in seconds.
-
-
-
Package clickTrainDetector.classification.standardClassifier
-
Class clickTrainDetector.classification.standardClassifier.StandardClassifierParams
class StandardClassifierParams extends CTClassifierParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
ctClassifierParams
CTClassifierParams[] ctClassifierParams
List of the classifier parameters used. -
enable
boolean[] enable
List of which classifiers are enabled.
-
-
-
Package clickTrainDetector.classification.templateClassifier
-
Class clickTrainDetector.classification.templateClassifier.SpectrumTemplateParams
class SpectrumTemplateParams extends Object implements Serializable- serialVersionUID:
- 3L
-
Serialized Fields
-
name
String name
The name of the template. -
sampleRate
float sampleRate
The sample rate in Hz -
template
double[] template
The spectrum template data.
-
-
Class clickTrainDetector.classification.templateClassifier.TemplateClassifierParams
class TemplateClassifierParams extends CTClassifierParams implements Serializable- serialVersionUID:
- 10L
-
Serialized Fields
-
corrThreshold
Double corrThreshold
The correlation threshold. -
spectrumTemplate
MatchTemplate spectrumTemplate
Match FFT template.
-
-
Class clickTrainDetector.classification.templateClassifier.TemplateCorrParams
class TemplateCorrParams extends CTClassifierParams implements Serializable-
Serialized Fields
-
corrThreshold
Double corrThreshold
The correlation threshold. -
spectrumTemplate
MatchTemplate spectrumTemplate
Match FFT template.
-
-
-
-
Package clickTrainDetector.clickTrainAlgorithms.mht
-
Class clickTrainDetector.clickTrainAlgorithms.mht.MHTChi2Params
class MHTChi2Params extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
maxICI
double maxICI
The absolute maximum ICI for a click train in seconds!
-
-
Class clickTrainDetector.clickTrainAlgorithms.mht.MHTKernelParams
class MHTKernelParams extends Object implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
maxCoast
int maxCoast
The maximum number of coasts i.e. missing clicks before a click train is saved. -
nHold
int nHold
The maximum number of unique branches past the pruneBack point to keep -
nPruneback
int nPruneback
The branches are pruned to nHold number of branches by going back nPruneBack values. -
nPruneBackStart
int nPruneBackStart
The minimum number of added detections to the probability matrix allowed before a prune back of possibilities takes place.
-
-
Class clickTrainDetector.clickTrainAlgorithms.mht.MHTParams
class MHTParams extends Object implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
chi2Params
MHTChi2Params chi2Params
Parameters for chi^2 params. This can be any method to calculate a chi^2 value from a click train. -
mhtKernal
MHTKernelParams mhtKernal
MHT Kernel params.
-
-
Class clickTrainDetector.clickTrainAlgorithms.mht.StandardMHTChi2Params
class StandardMHTChi2Params extends MHTChi2Params implements Serializable- serialVersionUID:
- 12L
-
Serialized Fields
-
chi2Settings
Object[] chi2Settings
Simply stores bespoke settings class for mhtChi2Vars; Only used because ArrayListinvalid input: '<'MHTChi2Var> is not serializable. -
coastPenalty
double coastPenalty
The penalty factor for a single coast. -
electricalNoiseParams
SimpleElectricalNoiseParams electricalNoiseParams
Simple electrical noise parameters. -
enable
boolean[] enable
List of enabled params. -
longTrackBonus
double longTrackBonus
Deprecated.The bonus factor for having a longer track. -
longTrackExponent
double longTrackExponent
Exponent for the long track bonus - no point in using a multiplier because then just multiplying all tracks by the same number. Thus the higher this is the more the more weight is given to longer tracks. Make zero to remove bonus -
lowICIExponent
double lowICIExponent
Exponent for the low ICI track bonus - no point in using a multiplier because then just multiplying all tracks by the same number. Thus the higher this is the more the more weight is given to loweer ICI tracks. Make zero to remove bonus. -
lowTrackICIBonus
double lowTrackICIBonus
Deprecated.Bonus factor for a track with lower ICI. -
maxICIMultipler
double maxICIMultipler
Deprecated.The maximum multiple of the median ICI of a track that maximum ICI of the track can be. Deprecated. No longer used. -
newTrackN
int newTrackN
The maximum number of detections after which a track is no longer considered a new track. -
newTrackPenalty
double newTrackPenalty
The penalty factor for starting a new track. -
useCorrelation
boolean useCorrelation
True to use cross correlation to calculate ICI values. -
useElectricNoiseFilter
boolean useElectricNoiseFilter
True to add a test as to whether data is too consistent, i.e. likely to be electrical noise..
-
-
-
Package clickTrainDetector.clickTrainAlgorithms.mht.electricalNoiseFilter
-
Class clickTrainDetector.clickTrainAlgorithms.mht.electricalNoiseFilter.SimpleElectricalNoiseParams
class SimpleElectricalNoiseParams extends Object implements Serializable- serialVersionUID:
- 7L
-
Serialized Fields
-
minChi2
double minChi2
The minimum chi^2 value allowed -
nDataUnits
int nDataUnits
The minimum number of data units before a test can add a penalty factor.
-
-
-
Package clickTrainDetector.clickTrainAlgorithms.mht.mhtvar
-
Class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.AmplitudeChi2Params
class AmplitudeChi2Params extends SimpleChi2VarParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
ampJumpEnable
boolean ampJumpEnable
Whether the bearing jump is used. -
maxAmpJump
double maxAmpJump
The maximum allowed bearing bearing jump in a click train in RADIANS
-
-
Class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.BearingChi2VarParams
class BearingChi2VarParams extends SimpleChi2VarParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
bearingJumpDrctn
BearingChi2VarParams.BearingJumpDrctn bearingJumpDrctn
Whether the bearing jump can be in both directions, positive or negative. Note that this is useful for towed hydrophone arrays were we would almost always expect bearing changes to move from positive to negative. If a jump is for example, positive, then only large positive jumps will incure a penalty. Large negative jumps will be ignored (however will still create higher chi^2 values making them less diserable for the click train detector ) -
bearingJumpEnable
boolean bearingJumpEnable
Whether the bearing jump is used. -
maxBearingJump
double maxBearingJump
The maximum allowed bearing bearing jump in a click train in RADIANS
-
-
Class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.CorrelationChi2Params
class CorrelationChi2Params extends SimpleChi2VarParams implements Serializable- serialVersionUID:
- 4L
-
Serialized Fields
-
fftFilterParams
FFTFilterParams fftFilterParams
The filter parameters. How the waveforms are filtered before corss correlation values are calculated. -
useFilter
boolean useFilter
Use a filter for correlation calculations.
-
-
Class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.CorrelationMap
- serialVersionUID:
- 1L
-
Serialized Fields
-
dataUnitUID
long dataUnitUID
The UID of the master data unit the correlation map belongs to.
-
-
Class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.IDIChi2Params
class IDIChi2Params extends SimpleChi2VarParams implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
minIDI
double minIDI
The minimum IDI before a large Chi2 penalty is added.
-
-
Class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.SimpleChi2VarParams
class SimpleChi2VarParams extends Object implements Serializable- serialVersionUID:
- 10L
-
Serialized Fields
-
errLimits
double[] errLimits
Deprecated.The limits in which a user can change the slider. Only used with GUI for slider -
error
double error
The error value. This changes the relevance of the particular chi2 val. -
errorScaleValue
double errorScaleValue
Get the scaling value for the MHT variable. The scaling value is used to set the scale for input controls so that users can set relative rather than absolute errors. It's essentially a guess at the standard error. So for example it might be 10 for amplitude because it's on the dB scale and perhaps 0.01 for the ICI value because the units are in seconds. -
minError
double minError
The minimum error value allowed. This is used if error*ICI invalid input: '<' minError. -
name
String name
The name of the MHT variable. -
unitString
String unitString
Units string.
-
-
Class clickTrainDetector.clickTrainAlgorithms.mht.mhtvar.TimeDelayParams
class TimeDelayParams extends SimpleChi2VarParams implements Serializable- serialVersionUID:
- 1L
-
-
Package clickTrainDetector.dataselector
-
Class clickTrainDetector.dataselector.CTSelectParams
class CTSelectParams extends DataSelectParams implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
allowAnyClassification
boolean allowAnyClassification
True of the click train detector needs a classifcation No !!!! This 'needsClassification' variable was been used the wrong way around throughout and is screwing the classiifer. I've therefore replaced it with the variable allowAll which is how this is actually used ! Given that anything using this would have has screwed logic, I don't care if I break a config or two ! DG 22/9/22 -
allowMultipleChoices
boolean allowMultipleChoices
In the data selector, if this is false it will only look at the best classifier, i.e. the one with the best classifier score. If set true it will check every species above min score even if it's not the first classification choice. -
classifier
int[] classifier
The classifier type(s) to select -
maxAngleChange
double maxAngleChange
The angle change at which a new bearing line is drawn. Note that minTime overrides the maxAngle in RADIANS -
maxTime
long maxTime
The maximum time between bearing lines being drawn on the map in millis -
minSubDetections
int minSubDetections
The minimum number of sub detections before a click train is plotted. -
minTime
long minTime
The minimum time between bearing lines being drawn on the map in millis -
needsLoc
boolean needsLoc
Remove if has localisation
-
-
-
Package clickTrainDetector.layout.mht
-
Class clickTrainDetector.layout.mht.MHTSidePaneSwing.BufferPanel
class BufferPanel extends PamPanel implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
bufferBar
JProgressBar bufferBar
A progress bar showing buffer -
bufferLabel
JLabel bufferLabel
Label showing % full. -
channelLabel
JLabel channelLabel
The channel a label -
channels
int channels
The channel bitmap this represents. -
posLabel
JLabel posLabel
-
-
-
Package clickTrainDetector.localisation
-
Class clickTrainDetector.localisation.CTLocParams
class CTLocParams extends TMAnnotationOptions implements Serializable- serialVersionUID:
- 4L
-
Serialized Fields
-
minAngleRange
double minAngleRange
The minimum angle range before attempting a localisation -
minDataUnits
int minDataUnits
The minimum number of data units within a detection before attempting a localisation -
shouldloc
boolean shouldloc
True to attempt a loclaisation.
-
-
-
Package clickTrainDetector.offline
-
Class clickTrainDetector.offline.CTProcessDialog
class CTProcessDialog extends OLProcessDialog implements Serializable- serialVersionUID:
- 1L
-
-
Package clipgenerator
-
Class clipgenerator.ClipDialog
class ClipDialog extends PamDialog implements Serializable-
Serialized Fields
-
clipControl
ClipControl clipControl
-
clipPanel
clipgenerator.ClipDialog.ClipPanel clipPanel
-
clipSettings
ClipSettings clipSettings
-
sourcePanel
SourcePanel sourcePanel
-
storagePanel
clipgenerator.ClipDialog.StoragePanel storagePanel
-
-
-
Class clipgenerator.ClipDisplayDialog
class ClipDisplayDialog extends PamDialog implements Serializable-
Serialized Fields
-
clipSettings
ClipSettings clipSettings
-
rangeFields
JTextField[] rangeFields
-
-
-
Class clipgenerator.ClipGenSetting
class ClipGenSetting extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
budgetPeriodHours
double budgetPeriodHours
Budget period in hours. -
channelSelection
int channelSelection
Channel selection, all, first, one, etc. -
clipPrefix
String clipPrefix
prefix for the clip (ahead of the date string). Can be null in which case the default is used. -
dataBudget
int dataBudget
Data budget in kilobytes. -
dataName
String dataName
Data name of the trigger data block. -
enable
boolean enable
Enabled -
hadMapLine
boolean hadMapLine
-
mapLineLength
Double mapLineLength
Length of line to display on map in metres. -
postSeconds
double postSeconds
Seconds after end of trigger. -
preSeconds
double preSeconds
Seconds before start of trigger -
useDataBudget
boolean useDataBudget
If false, then record absolutely everything.
-
-
Class clipgenerator.ClipGenSettingDialog
class ClipGenSettingDialog extends PamDialog implements Serializable-
Serialized Fields
-
budgetOff
JRadioButton budgetOff
-
budgetOn
JRadioButton budgetOn
-
budgetPeriod
JTextField budgetPeriod
-
channelSel
JComboBox channelSel
-
clipGenSetting
ClipGenSetting clipGenSetting
-
dataBudget
JTextField dataBudget
-
fileInitials
JTextField fileInitials
-
postSeconds
JTextField postSeconds
-
preSeconds
JTextField preSeconds
-
-
-
Class clipgenerator.ClipSettings
class ClipSettings extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
clipGenSettings
ArrayList<ClipGenSetting> clipGenSettings
List of clip generator settings. -
compressorIndex
int compressorIndex
Id of compressor to use to squish data (currently only used in Annotation version, need to add to Integer version). -
dataSourceName
String dataSourceName
Raw Audio Data source. -
datedSubFolders
boolean datedSubFolders
-
outputFolder
String outputFolder
output file folder. -
storageOption
int storageOption
-
-
-
Package clipgenerator.clipDisplay
-
Class clipgenerator.clipDisplay.ClipDisplayParameters
class ClipDisplayParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
amlitudeMinVal
double amlitudeMinVal
-
amplitudeMinMax
double amplitudeMinMax
-
amplitudeMinMin
double amplitudeMinMin
Values used to set max and min values for the controls. -
amplitudeMinStep
double amplitudeMinStep
-
amplitudeRangeMax
double amplitudeRangeMax
-
amplitudeRangeMin
double amplitudeRangeMin
-
amplitudeRangeStep
double amplitudeRangeStep
-
amplitudeRangeVal
double amplitudeRangeVal
-
colourMap
ColourArray.ColourArrayType colourMap
-
frequencyScale
double frequencyScale
-
imageHScale
double imageHScale
-
imageVScale
double imageVScale
-
logFFTLength
int logFFTLength
-
maxClips
int maxClips
-
maxMinutes
int maxMinutes
-
newClipOrder
int newClipOrder
-
showControlPanel
boolean showControlPanel
-
showTriggerOverlay
boolean showTriggerOverlay
-
-
Class clipgenerator.clipDisplay.ClipDisplayUnit
class ClipDisplayUnit extends PamPanel implements Serializable-
Serialized Fields
-
axisPanel
JPanel axisPanel
-
borderSize
int borderSize
-
chanCol
Color chanCol
-
clipDataUnit
ClipDataUnit clipDataUnit
-
clipDisplayPanel
ClipDisplayPanel clipDisplayPanel
-
displayDecorations
ClipDisplayDecorations displayDecorations
-
fm
FontMetrics fm
-
fontAscent
int fontAscent
-
fontHeight
int fontHeight
-
highlighPane
clipgenerator.clipDisplay.ClipDisplayUnit.HighlightPane highlighPane
-
highlight
boolean highlight
-
image
BufferedImage image
-
imagePanel
clipgenerator.clipDisplay.ClipDisplayUnit.ImagePanel imagePanel
-
mainPanel
PamPanel mainPanel
-
triggerDataUnit
PamDataUnit triggerDataUnit
-
-
-
Class clipgenerator.clipDisplay.ClipLayout
class ClipLayout extends FlowLayout implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
panelWidth
int panelWidth
-
-
-
Package cpod
-
Class cpod.CPODDataGram
class CPODDataGram extends Datagram implements Serializable- serialVersionUID:
- 1L
-
Class cpod.CPODDataMapPoint
class CPODDataMapPoint extends OfflineFileMapPoint implements Serializable-
Serialized Fields
-
dataGram
Datagram dataGram
-
filePos
long filePos
-
-
-
Class cpod.CPODDialog
class CPODDialog extends PamDialog implements Serializable-
Serialized Fields
-
cpodControl
CPODControl cpodControl
Deprecated. -
cpodParams
CPODParams cpodParams
Deprecated. -
selectFolder
SelectFolder selectFolder
Deprecated. -
startOffset
JTextField startOffset
Deprecated. -
timeStretch
JTextField timeStretch
Deprecated.
-
-
-
Class cpod.CPODParams
class CPODParams extends OfflineFileParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
startOffset
double startOffset
-
timeStretch
double timeStretch
-
-
-
Package cpod.dataSelector
-
Class cpod.dataSelector.CPODDatSelectorParams
class CPODDatSelectorParams extends DataSelectParams implements Serializable- serialVersionUID:
- 5L
-
Serialized Fields
-
cpodDataFilterParams
ArrayList<StandardCPODFilterParams> cpodDataFilterParams
-
-
Class cpod.dataSelector.StandardCPODFilterParams
class StandardCPODFilterParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
dataType
int dataType
The data to extract from the CPOD -
max
double max
The maximum value for the CPOD data -
min
double min
The minimum value for the CPOD data
-
-
-
Package crossedbearinglocaliser
-
Class crossedbearinglocaliser.CBLocaliserSettngs
class CBLocaliserSettngs extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
minDetections
int minDetections
-
parentDataBlock
String parentDataBlock
-
tmAnnotationOptions
TMAnnotationOptions tmAnnotationOptions
-
-
-
Package d3
-
Class d3.D3DataMapPoint
class D3DataMapPoint extends OfflineFileMapPoint implements Serializable-
Serialized Fields
-
fileOffsetEnd
long fileOffsetEnd
Offset for the end of the data in this file from the start of the file - stops anything trying to read too far. -
fileOffsetStart
long fileOffsetStart
Offset of the data in this file from the start of the file.
-
-
-
-
Package dataGram
-
Class dataGram.Datagram
class Datagram extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
dataPoints
ArrayList<DatagramDataPoint> dataPoints
-
intervalSeconds
int intervalSeconds
-
offlineDataMapPoint
OfflineDataMapPoint offlineDataMapPoint
-
-
Class dataGram.DatagramDataPoint
class DatagramDataPoint extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
data
float[] data
-
datagram
Datagram datagram
-
endTime
long endTime
-
nDataUnits
int nDataUnits
-
startTime
long startTime
-
-
Class dataGram.DatagramDialog
class DatagramDialog extends PamDialog implements Serializable-
Serialized Fields
-
datagramManager
DatagramManager datagramManager
-
datagramSeconds
JTextField datagramSeconds
-
datagramSettings
DatagramSettings datagramSettings
-
infoArea
JLabel infoArea
-
-
-
Class dataGram.DatagramProgressDialog
class DatagramProgressDialog extends PamDialog implements Serializable-
Serialized Fields
-
blockName
JLabel blockName
-
currentMapPoint
BinaryOfflineDataMapPoint currentMapPoint
-
fileProgress
JProgressBar fileProgress
-
mapPointProgress
JProgressBar mapPointProgress
-
nDataBlocks
int nDataBlocks
-
nMapPoints
int nMapPoints
-
textMsg
JLabel textMsg
-
-
-
Class dataGram.DatagramSettings
class DatagramSettings extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
datagramSeconds
int datagramSeconds
-
displayMultiplier
int displayMultiplier
-
validDatagramSettings
boolean validDatagramSettings
-
-
-
Package dataMap
-
Class dataMap.DataMapPanel
class DataMapPanel extends PamBorderPanel implements Serializable-
Serialized Fields
-
dataMapControl
DataMapControl dataMapControl
-
graphDimension
Dimension graphDimension
-
scalePanel
ScalePanel scalePanel
-
scrollingDataPanel
ScrollingDataPanel scrollingDataPanel
-
summaryPanel
SummaryPanel summaryPanel
-
-
-
Class dataMap.DataMapParameters
class DataMapParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
hScaleChoice
int hScaleChoice
-
vLogScale
boolean vLogScale
-
vScaleChoice
int vScaleChoice
-
-
Class dataMap.DataStreamPanel
class DataStreamPanel extends JPanel implements Serializable-
Serialized Fields
-
arrowX
double[] arrowX
-
arrowY
double[] arrowY
-
binaryColour
Color binaryColour
-
databaseColour
Color databaseColour
-
dataBlock
PamDataBlock dataBlock
-
datagramImage
BufferedImage datagramImage
-
dataGraph
DataStreamPanel.DataGraph dataGraph
-
dataMapControl
DataMapControl dataMapControl
-
dataName
dataMap.DataStreamPanel.DataName dataName
-
endTimeArrow
Polygon endTimeArrow
-
graphMenu
JPopupMenu graphMenu
-
graphVisible
boolean graphVisible
-
hasDatagram
boolean hasDatagram
-
haveDataColour
Color haveDataColour
-
lastPlotted2DmaxVal
double lastPlotted2DmaxVal
-
lastPlotted2DminVal
double lastPlotted2DminVal
-
maxDatas
int maxDatas
-
menuMouseTime
long menuMouseTime
-
minMaxVal
double[] minMaxVal
-
pixelsPerMilli
double pixelsPerMilli
-
scrollingDataPanel
ScrollingDataPanel scrollingDataPanel
-
showDataCounts
boolean showDataCounts
-
showDataCountsMenu
JCheckBoxMenuItem showDataCountsMenu
-
showDatagram
boolean showDatagram
-
showDatagramMenu
JCheckBoxMenuItem showDatagramMenu
-
startTimeArrow
Polygon startTimeArrow
-
totalDatas
int totalDatas
-
totalWheelRotation
int totalWheelRotation
-
wheelScrollFactor
double wheelScrollFactor
-
yAxis
PamAxis yAxis
-
yScaleMax
double yScaleMax
-
yScaleMin
double yScaleMin
-
-
-
Class dataMap.DataStreamPanel.DataGraph
class DataGraph extends JPanelWithPamKey implements Serializable-
Serialized Fields
-
datagramColours
ColourArray datagramColours
-
-
-
Class dataMap.OfflineDataMapPoint
class OfflineDataMapPoint extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
endTime
long endTime
End time of map point data -
missingUIDs
long missingUIDs
-
nDatas
int nDatas
Number of data points. -
startTime
long startTime
Start time of map point data
-
-
Class dataMap.ScrollingDataPanel
class ScrollingDataPanel extends PamBorderPanel implements Serializable-
Serialized Fields
-
boxLayout
BoxLayout boxLayout
-
dataMapControl
DataMapControl dataMapControl
-
dataMapLayout
DataMapLayout dataMapLayout
-
dataMapPanel
DataMapPanel dataMapPanel
-
dataStreamPanels
ArrayList<DataStreamPanel> dataStreamPanels
-
hScrollBar
JScrollBar hScrollBar
-
lastHScaleChoice
int lastHScaleChoice
-
lastWidth
int lastWidth
-
mainScrollPane
JScrollPane mainScrollPane
-
needScrollUpdate
boolean needScrollUpdate
-
offlineDataStores
ArrayList<OfflineDataStore> offlineDataStores
List of offline data sources. -
screenEndMillis
long screenEndMillis
-
screenSeconds
double screenSeconds
-
screenStartMillis
long screenStartMillis
-
scrolledPanel
JPanel scrolledPanel
Scrolled panel which will contain the actual DataStreamPanels -
scrollPanelContainer
JPanel scrollPanelContainer
-
settingsStrip
SettingsStrip settingsStrip
-
updateTimer
Timer updateTimer
-
-
-
Class dataMap.SettingsStrip
class SettingsStrip extends JPanelWithPamKey implements Serializable-
Serialized Fields
-
pamController
PamController pamController
-
pixelsPerMilli
double pixelsPerMilli
-
quickFinds
LinkedList<dataMap.SettingsStrip.DrawnQuickFind> quickFinds
-
scrollingDataPanel
ScrollingDataPanel scrollingDataPanel
-
startMillis
long startMillis
-
-
-
-
Package dataMap.filemaps
-
Class dataMap.filemaps.FileDataMapPoint
class FileDataMapPoint extends OfflineDataMapPoint implements Serializable- serialVersionUID:
- 4955333805088379820L
-
Serialized Fields
-
soundFile
File soundFile
-
-
Class dataMap.filemaps.FileMapMakingdialog
class FileMapMakingdialog extends PamDialog implements Serializable-
Serialized Fields
-
fileName
JLabel fileName
-
offlineFileServer
OfflineFileServer offlineFileServer
-
progress
JProgressBar progress
-
-
-
Class dataMap.filemaps.OfflineFileParameters
class OfflineFileParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
enable
boolean enable
Enable offline file access -
folderName
String folderName
Reference to wherever the offline files are. -
includeSubFolders
boolean includeSubFolders
include sub folders
-
-
-
Package dataModelFX
-
Class dataModelFX.DataModelPaneFXSettings
class DataModelPaneFXSettings extends Object implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
usedModuleInfos
ArrayList<ConnectionNodeParams> usedModuleInfos
List of the modules which have been used in the data model- this should be the same as the PamController list but also saves the location of the module.
-
-
Class dataModelFX.ModuleNodeParams
class ModuleNodeParams extends UsedModuleInfo implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
connectionNodeType
ConnectionNodeParams.PAMConnectionNodeType connectionNodeType
Get the connection node type. -
id
UUID id
A unique ID for the connection node. -
layoutX
double layoutX
The x position of the connection node in the data model pane. -
layoutY
double layoutY
The y position of the connection node in the data model pane. -
prefHeight
double prefHeight
The preferred height of the module connection node. -
prefWidth
double prefWidth
The preferred width of the module connection node -
unitType
String unitType
-
-
-
Package dataModelFX.structures
-
Class dataModelFX.structures.PamGroupStructureParams
class PamGroupStructureParams extends PamStructureParams implements Serializable- serialVersionUID:
- 1L
-
Class dataModelFX.structures.PamStructureParams
class PamStructureParams extends StructureParams implements Serializable- serialVersionUID:
- 1L
-
Class dataModelFX.structures.StructureParams
class StructureParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
id
UUID id
-
layoutX
double layoutX
The X position of the node in it's connection pane. -
layoutY
double layoutY
The Y position of the node in it's connection pane.
-
-
-
Package dataPlots
-
Class dataPlots.HidingControlPanel
class HidingControlPanel extends PamPanel implements Serializable -
Class dataPlots.TDPamScroller
class TDPamScroller extends PamScroller implements Serializable -
Class dataPlots.TDParameters
class TDParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
graphParameters
ArrayList<GraphParameters> graphParameters
-
orientation
int orientation
-
scrollableTimeRange
long scrollableTimeRange
-
scrollStartMillis
long scrollStartMillis
-
visibleTimeRange
double visibleTimeRange
-
-
-
Package dataPlots.layout
-
Class dataPlots.layout.CompoundHidingTabPane
class CompoundHidingTabPane extends TabbedHidingPane implements Serializable- serialVersionUID:
- 1L
-
Class dataPlots.layout.DataListInfo
class DataListInfo extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
currentDataLine
int currentDataLine
-
isShowing
boolean isShowing
-
listSettings
Serializable listSettings
-
providerClass
Class providerClass
-
providerName
String providerName
-
-
Class dataPlots.layout.GraphParameters
class GraphParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
autoScale
boolean autoScale
-
currentAxisName
String currentAxisName
-
dataListInfos
ArrayList<DataListInfo> dataListInfos
-
-
Class dataPlots.layout.TDGraph.GraphPlotPanel
class GraphPlotPanel extends PamPanel implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
bufferedImage
BufferedImage bufferedImage
-
plotNumber
int plotNumber
-
rl
long rl
-
-
-
Package dataPlotsFX
-
Class dataPlotsFX.TDControlAWT.TDFXPanel
class TDFXPanel extends javafx.embed.swing.JFXPanel implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
tdMainDisplay
TDDisplayFX tdMainDisplay
-
-
Class dataPlotsFX.TDGraphParametersFX
class TDGraphParametersFX extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
autoScale
boolean autoScale
Auto scale the axis. -
channels
int[] channels
Channel bitmap list. Channels which are plotted by each plot pane. If on plot pane that plot all channels then channels[0]=0; -
currentDataType
DataTypeInfo currentDataType
The current data type to show. -
dataListInfos
ArrayList<DataListInfo> dataListInfos
Allows TDDataInfo to be created when graph is initialised. Can't just have TDDataInfo here as a whole data block would end up being serialised (yes Americans, that is how you spell initialised and serialised). -
plotFillS
String plotFillS
Used only when saving as Color (javafx) is not serializable. -
popUpMenuType
int popUpMenuType
Flag which indicates what type of pop up menu to use; -
scaleInfoData
Hashtable<String,
TDScaleInfoData> scaleInfoData List of scale information for each scale type for the graph. -
showHidePaneLeft
boolean showHidePaneLeft
Show the hide panel on the left on start up. Note only used when first opening saved settings or saving settings. -
showHidePaneRight
boolean showHidePaneRight
Show the hide panel on the right on start up. Note only used when first opening saved settings or saving settings.
-
-
Class dataPlotsFX.TDParametersFX
class TDParametersFX extends Object implements Serializable- serialVersionUID:
- 3L
-
Serialized Fields
-
displayProviderParams
UserDisplayNodeParams displayProviderParams
Set of params which tell PG about the display. -
graphParameters
ArrayList<TDGraphParametersFX> graphParameters
A list of parameters for each tdGraph in the display -
orientation
javafx.geometry.Orientation orientation
Orientation of the graph, HORIZONTAL or VERTICAL -
overlayMarkerType
int overlayMarkerType
The type of overlay marker which is currently employed. -
scrollableTimeRange
double scrollableTimeRange
The number of milliseconds of scrollable data. This is basically the data that is stored in memory and can be scrolled through. DG. This was set at 5 minutes and would cause all panels to keep that much data, which caused out of memory errors with FFT data - which doesn't need to be kept in any case. Now fixed so it doesn't apply to fft data, so should be o to revert to 5minutes. -
scrollerDataGramIndex
int scrollerDataGramIndex
The index of the selected datragram in the acoustic sc roll bar. -
scrollStartMillis
double scrollStartMillis
The datenum in millis for the start of the time scroll bar. -
showControl
boolean showControl
Whether the control pane is showing or not. -
splitHeights
double[] splitHeights
Heights of split panes added to the display. -
startMillis
double startMillis
The start of the display; -
visibleTimeRange
long visibleTimeRange
The number of milliseconds displayed on the screen. -
wrap
boolean wrap
True to wrap the time display, false to scroll.
-
-
-
Package dataPlotsFX.clickPlotFX
-
Class dataPlotsFX.clickPlotFX.ClickDisplayParams
class ClickDisplayParams extends FFTPlotSettings implements Serializable- serialVersionUID:
- 3L
-
Serialized Fields
-
amplitudeRange
double[] amplitudeRange
The amplitude range -
bearingRange
double[] bearingRange
The bearing range. -
colourScheme
int colourScheme
The current colour scheme -
displayChannels
int displayChannels
Channel bitmap of channels to display. -
fftColor
String fftColor
Deprecated.Color of clicks on FFT -
fftCutOf
double fftCutOf
The cut off in energy at which a click FFT is not displayed. Represented as a % value 0-1; -
iciRange
double[] iciRange
The inter-click interval range -
maxClickHeight
int maxClickHeight
Max height of click in pixels. -
maxClickLength
int maxClickLength
Max length of click in pixels. -
minClickHeight
int minClickHeight
Min height of click in pixels. -
minClickLength
int minClickLength
Min length of click in pixels. -
slantRange
double[] slantRange
The slant angle -
thresholdFFT
boolean thresholdFFT
Plot FFT by threshold or by spectrogram if thge clicks are display on a frequency time axis.
-
-
-
Package dataPlotsFX.data
-
Class dataPlotsFX.data.DataTypeInfo
class DataTypeInfo extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
dataType
GeneralProjector.ParameterType dataType
Name of the data, e.g. accelerometer x; bearing; slant angle, etc. -
dataUnits
GeneralProjector.ParameterUnits dataUnits
Name of the data, e.g. accelerometer x; bearing; slant angle, etc.
-
-
Class dataPlotsFX.data.TDDataListInfoFX
class TDDataListInfoFX extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
currentDataLine
int currentDataLine
-
isShowing
boolean isShowing
-
listSettings
Serializable listSettings
-
providerClass
Class<?> providerClass
-
providerName
String providerName
-
-
Class dataPlotsFX.data.TDScaleInfoData
class TDScaleInfoData extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
autoDivisor
boolean autoDivisor
Automatically calculate a divisor value for the data e.g. 1000 -> k 1000000 - M -
divisorString
String divisorString
String representation of the divisor, typically k (kilo) M (mega) etc. -
maxVal
double maxVal
The maxiumum value -
minVal
double minVal
The minimum value -
plotChannels
int[] plotChannels
The channels/sequences associated with different plots. If 0 then plot can plot all channels. If any other number then a plot can only plot those channels. Most of the time this will be unused, however for some case, e.g. spectrogram overlays it is necessary. as plotChannels[0] refers to channels for plot pane 0, plotChannels[1] for channels in plot pane 2 etc. It is assumed the user will not have a need for one display showing more than PamConstants.MAX_CHANNELS channels of data. Note that, depending on the source, this may hold either channels or sequence numbers. It is left to the user to be careful not to mix the two when selecting which PamDataBlocks to display on the same graph -
unitDivisor
double unitDivisor
Unit divisor for the display of units on graphs etc. -
visiblePlotChannels
boolean[] visiblePlotChannels
The visible channels. True to show a channel on the map and false to not show. The visiblePlotChannels is the same size and represents the same channelsTDScaleInfoData.plotChannels
-
-
-
Package dataPlotsFX.rawClipDataPlot
-
Class dataPlotsFX.rawClipDataPlot.RawClipParams
class RawClipParams extends FFTPlotSettings implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
showSpectrogram
boolean showSpectrogram
True to show a spectrogram clip - otherwise frequency box. -
windowType
int windowType
The window type for the spectrogram
-
-
-
Package dataPlotsFX.scroller
-
Class dataPlotsFX.scroller.TDAcousticScroller
class TDAcousticScroller extends AcousticScrollerFX implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
allObservers
ArrayList<dataPlotsFX.scroller.TDAcousticScroller.AcousticObserver> allObservers
Need a list of all observers since every time a new data block is added, there is a call to checkDataBlockGraphics which subscribes AcousticObservers to all the source data. This results in many blocks being added many times. This list is used to delete all these observers just before they all get added again. Very inefficient, but will work well enough. -
currentAcousticObserver
dataPlotsFX.scroller.TDAcousticScroller.AcousticObserver currentAcousticObserver
-
dataSelectButton
javafx.scene.control.MenuButton dataSelectButton
The data selector button. -
flipPane
FlipPane flipPane
The flip pane. -
mainTDScrollPane
PamBorderPane mainTDScrollPane
Pane ot hold the scroll pane -
rawDataBlock
PamDataBlock<RawDataUnit> rawDataBlock
The current raw data block for the acoustic scroller. -
rawScrollBarGraphics
RawScrollBarGraphics rawScrollBarGraphics
Graphics for acoustic data. -
scrollerColourParams
TDAcousticScrollerParams scrollerColourParams
-
settingsHolder
javafx.scene.layout.StackPane settingsHolder
Stack pane. -
settingsPane
TDScrollerSettingsPane settingsPane
Settings pane for the scroller. -
spinner
TimeRangeScrollSpinner spinner
Spinner for changing the window size. i.e. how many seconds the windows shows. -
spinnerCall
boolean spinnerCall
-
tdDisplay
TDDisplayFX tdDisplay
The tdDisplay pane which holds this time scroller.
-
-
Class dataPlotsFX.scroller.TDAcousticScrollerParams
class TDAcousticScrollerParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
amplitudeLimits
double[] amplitudeLimits
The amplitude limits of the color scale. -
amplitudeMinMax
double[] amplitudeMinMax
The min and max allowed amplitude for the colour scale -
colourMap
ColourArray.ColourArrayType colourMap
Type of colour scheme for spectrogram. -
disableSpectrumPreview
boolean disableSpectrumPreview
Disables the spectrogram preview if true. Used to prevent long clunky load times, especially for high frequency data.
-
-
Class dataPlotsFX.scroller.TDPamScrollerFX
class TDPamScrollerFX extends PamScrollerFX implements Serializable-
Serialized Fields
-
scrollHolder
PamBorderPane scrollHolder
Holds the scroll bar and spinner. -
spinner
TimeRangeScrollSpinner spinner
Spinner for changing the window size. i.e. how many seconds the windows shows. -
tdDisplay
TDDisplayFX tdDisplay
The tdDisplay pane which holds this time scroller.
-
-
-
-
Package dataPlotsFX.scrollingPlot2D
-
Class dataPlotsFX.scrollingPlot2D.PlotParams2D
class PlotParams2D extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
amplitudeLimitsSerial
double[] amplitudeLimitsSerial
Amplitude limits- only used when serializing; -
colourMap
ColourArray.ColourArrayType colourMap
Type of colour scheme for spectrogram. -
maxAmplitudeLimits
double[] maxAmplitudeLimits
The maximum limits of the amplitude slider bar.
-
-
-
Package dataPlotsFX.spectrogramPlotFX
-
Class dataPlotsFX.spectrogramPlotFX.SpectrogramParamsFX
class SpectrogramParamsFX extends PlotParams2D implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
frequencyLimitsSerial
double[] frequencyLimitsSerial
Frequency limits- only used when serializing;
-
-
-
Package dbht
-
Class dbht.DbHtDialog
class DbHtDialog extends PamDialog implements Serializable-
Serialized Fields
-
bodePlot
dbht.DbHtDialog.BodePlot bodePlot
-
bodePlotAxis
dbht.DbHtDialog.BodePlotAxis bodePlotAxis
-
currentSampleRate
double currentSampleRate
-
dbHtControl
DbHtControl dbHtControl
-
firArbfilter
FIRArbitraryFilter firArbfilter
-
params
DbHtParameters params
-
paramsPanel
dbht.DbHtDialog.ParamsPanel paramsPanel
-
sourcePanel
SourcePanel sourcePanel
-
tapPlot
dbht.DbHtDialog.TapPlot tapPlot
-
tapPlotAxis
dbht.DbHtDialog.TapPlotAxis tapPlotAxis
-
tdModel
dbht.DbHtDialog.ThresholdTableDataModel tdModel
-
thresholdTable
JTable thresholdTable
-
-
-
Class dbht.DbHtDisplayDialog
class DbHtDisplayDialog extends PamDialog implements Serializable-
Serialized Fields
-
autoScale
JCheckBox autoScale
-
colourByChannel
JCheckBox colourByChannel
-
dbhtControl
DbHtControl dbhtControl
-
drawLines
JCheckBox drawLines
-
maxAmp
JTextField maxAmp
-
minAmp
JTextField minAmp
-
params
DbHtDisplayParams params
-
showGrid
JCheckBox showGrid
-
showMeasure
JCheckBox[] showMeasure
-
symbolSize
JTextField symbolSize
-
-
-
Class dbht.DbHtDisplayParams
class DbHtDisplayParams extends Object implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
autoScale
boolean autoScale
-
colourByChannel
boolean colourByChannel
-
drawLine
boolean drawLine
-
maxAmplitude
double maxAmplitude
-
minAmplitude
double minAmplitude
-
showGrid
boolean showGrid
-
showWhat
int showWhat
-
symbolSize
int symbolSize
-
timeRange
long timeRange
-
-
Exception Class dbht.DbHtException
class DbHtException extends Exception implements Serializable- serialVersionUID:
- 1L
-
Class dbht.DbHtParameters
class DbHtParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
channelMap
int channelMap
Channel map for measurements. -
chebyGamma
double chebyGamma
Gamma for Chebychev window. -
dataSource
String dataSource
Data source name -
filterLogOrder
int filterLogOrder
log2 of the filter order (actual filter will probably be one less than this value). -
frequencyPoints
double[] frequencyPoints
Array of frequency points Must be same length as hearingThreshold -
hearingThreshold
double[] hearingThreshold
array of hearing threshold values. Must be same length as frequencyPoints -
lastImportFile
File lastImportFile
-
measurementInterval
int measurementInterval
Measurement interval in seconds.
-
-
-
Package dbht.alarm
-
Class dbht.alarm.DbHtAlarmParameters
class DbHtAlarmParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
returnedMeasure
int returnedMeasure
-
-
Class dbht.alarm.DbHtAlarmParamsDialog
class DbHtAlarmParamsDialog extends PamDialog implements Serializable-
Serialized Fields
-
dbHtAlarmCounter
DbHtAlarmCounter dbHtAlarmCounter
-
dbHtAlarmParameters
DbHtAlarmParameters dbHtAlarmParameters
-
measures
JRadioButton[] measures
-
-
-
-
Package dbht.offline
-
Class dbht.offline.DbHtSummaryDialog
class DbHtSummaryDialog extends PamDialog implements Serializable-
Serialized Fields
-
dbHtSummaryParams
DbHtSummaryParams dbHtSummaryParams
-
exportInterval
JTextField exportInterval
-
-
-
Class dbht.offline.DbHtSummaryParams
class DbHtSummaryParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
intervalSeconds
int intervalSeconds
-
-
-
Package decimator
-
Class decimator.DecimatorParams
class DecimatorParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
channelMap
int channelMap
-
filterParams
FilterParams filterParams
-
interpolation
int interpolation
-
newSampleRate
float newSampleRate
-
rawDataSource
String rawDataSource
-
-
Class decimator.DecimatorParamsDialog
class DecimatorParamsDialog extends PamDialog implements Serializable-
Serialized Fields
-
decimatorControl
DecimatorControl decimatorControl
-
defaultFilterButton
JButton defaultFilterButton
-
filterButton
JButton filterButton
-
filterInfo
JLabel filterInfo
-
inputSampleRate
float inputSampleRate
-
interpolator
JComboBox<String> interpolator
-
isViewer
boolean isViewer
-
newSampleRate
JTextField newSampleRate
-
offlineDAQDialogPanel
OfflineFileDialogPanel offlineDAQDialogPanel
-
parentFrame
Frame parentFrame
-
sourcePanel
SourcePanel sourcePanel
-
sourceSampleRate
JLabel sourceSampleRate
-
-
-
-
Package depthReadout
-
Class depthReadout.DepthDialog
class DepthDialog extends PamDialog implements Serializable-
Serialized Fields
-
depthControl
DepthControl depthControl
-
depthParameters
DepthParameters depthParameters
-
depthSystem
DepthSystem depthSystem
-
devicePanel
depthReadout.DepthDialog.DevicePanel devicePanel
-
-
-
Class depthReadout.DepthParameters
class DepthParameters extends Object implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
hydrophoneMaps
int[] hydrophoneMaps
This is actually a streamer map now, not hydrophones but leave it alone. -
hydrophoneY
double[] hydrophoneY
Deprecated. -
nSensors
int nSensors
-
pollTime
double pollTime
-
systemNumber
int systemNumber
-
-
Class depthReadout.MccDepthParameters
class MccDepthParameters extends Object implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
iBoard
int iBoard
board index, not MCC Number. -
mccSensorParameters
MccDepthParameters.MccSensorParameters[] mccSensorParameters
-
range
int range
-
-
Class depthReadout.MccDepthParameters.MccSensorParameters
class MccSensorParameters extends Object implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
iChan
int iChan
-
scaleA
double scaleA
Deth = scaleA * voltage + scaleB; -
scaleB
double scaleB
-
-
Class depthReadout.MccDialog
class MccDialog extends PamDialog implements Serializable-
Serialized Fields
-
boardPanel
depthReadout.MccDialog.BoardPanel boardPanel
-
depthControl
DepthControl depthControl
-
depthParameters
DepthParameters depthParameters
-
mccDepthParameters
MccDepthParameters mccDepthParameters
-
mccDepthSystem
MccDepthSystem mccDepthSystem
-
mccJniInterface
MccJniInterface mccJniInterface
-
sensorsPanel
depthReadout.MccDialog.SensorsPanel sensorsPanel
-
-
-
-
Package detectiongrouplocaliser
-
Class detectiongrouplocaliser.DetectionGroupSettings
class DetectionGroupSettings extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
annotationChoices
AnnotationChoices annotationChoices
-
autoCrossedBearings
boolean autoCrossedBearings
-
minCrossedBearings
int minCrossedBearings
-
offlineShowOption
int offlineShowOption
-
overlayMarkInfo
Hashtable<String,
OverlayMarkDataInfo> overlayMarkInfo
-
-
-
Package detectiongrouplocaliser.dialogs
-
Class detectiongrouplocaliser.dialogs.DetectionGroupDialog
class DetectionGroupDialog extends PamDialog implements Serializable-
Serialized Fields
-
annotationHandler
AnnotationChoiceHandler annotationHandler
-
annotationPanel
AnnotationsSelectionPanel annotationPanel
-
dataSelector
OverlaySwingPanel dataSelector
-
detectionGroupControl
DetectionGroupControl detectionGroupControl
-
markProvidersPanel
MarkProvidersPanel markProvidersPanel
-
okPressed
boolean okPressed
-
-
-
-
Package detectionPlotFX
-
Class detectionPlotFX.DetectionPlotParams
class DetectionPlotParams extends UserDisplayNodeParams implements Serializable- serialVersionUID:
- 3L
-
Serialized Fields
-
dataAxisMap
HashMap<String,
String> dataAxisMap Saves which data axis is used for which data block. The key is the data block long name and the result is the name of the plot e.g. waveform. In this way users can set how they want the data plots to display different types of data units and the dispay types are saved on PAMGuard opne and close. -
dataSource
String dataSource
The data source for the detection plot. -
showScrollBar
boolean showScrollBar
True to show the scroll bar.
-
-
-
Package detectionPlotFX.plots
-
Class detectionPlotFX.plots.FFTPlotParams
class FFTPlotParams extends Object implements Serializable- serialVersionUID:
- 4L
-
Serialized Fields
-
colorArray
ColourArray.ColourArrayType colorArray
The colour array for the plot. -
detPadding
long detPadding
The padding to either side of the detection -
fftHop
int fftHop
The fft hop -
fftLength
int fftLength
The fft length -
freqAmplitudeLimits
double[] freqAmplitudeLimits
The minimum and maximum frequency amplitude limits that can be set using the colour bar -
freqAmplitudeRange
double[] freqAmplitudeRange
The range of amplitudes between which there is a colour scale -
normalise
boolean normalise
Normalise the FFFT's -
plotChannel
int plotChannel
The plot channel -
windowFunction
int windowFunction
The window function index.
-
-
Class detectionPlotFX.plots.SpectrumPlotParams
class SpectrumPlotParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
channelChoice
int channelChoice
-
logRange
double logRange
-
logScale
boolean logScale
-
plotCepstrum
boolean plotCepstrum
-
plotSmoothing
int plotSmoothing
-
showEventInfo
boolean showEventInfo
-
smoothPlot
boolean smoothPlot
-
-
Class detectionPlotFX.plots.WaveformPlotParams
class WaveformPlotParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
invert
boolean invert
Invert the waveform -
maxLength
double maxLength
The length of the x scale. -
showFilteredWaveform
boolean showFilteredWaveform
View a filtered waveform. -
showSperateWaveform
boolean showSperateWaveform
Seperate waveform plots -
waveFixedXScale
boolean waveFixedXScale
Show a fixed x scale. -
waveformFilterParams
FFTFilterParams waveformFilterParams
Parameters for waveform filter. -
waveShowEnvelope
boolean waveShowEnvelope
Show the waveform plot
-
-
Class detectionPlotFX.plots.WignerPlotParams
class WignerPlotParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
chan
Integer chan
-
colorArray
ColourArray.ColourArrayType colorArray
The colour array of the wigner plot -
limitLength
boolean limitLength
-
manualLength
int manualLength
-
maxColourVal
double maxColourVal
The max colour value...i.e. the value of the wigner plot which be the extreme gradient of the colour aray. -
minColourVal
double minColourVal
The min colour value...i.e. the value of the wigner plot which be the extreme gradient of the colour aray.
-
-
-
Package detectionPlotFX.whistleDDPlot
-
Class detectionPlotFX.whistleDDPlot.WhistlePlotParams
class WhistlePlotParams extends FFTPlotParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
contourColor
javafx.scene.paint.Color contourColor
-
-
-
Package difar
-
Class difar.DifarParameters
class DifarParameters extends Object implements Serializable- serialVersionUID:
- 10L
-
Serialized Fields
-
amplitudeScaledLineLength
boolean amplitudeScaledLineLength
Auto scale line length depending on range -
amplitudeScaledOpacity
boolean amplitudeScaledOpacity
-
assignClassification
boolean assignClassification
Spectrogram marks will be assigned the selected classification in sidebar -
autoProcess
boolean autoProcess
whether to autoprocess vessel clips(now the only ones that can be) -
autoSaveAngleOnly
boolean autoSaveAngleOnly
when auto saving the difar result either the angle can be saved or the angle and range can be saved if it has range -
autoSaveDResult
boolean autoSaveDResult
-
autoSaveTime
float autoSaveTime
time afterwhich item has been sitting in difargram to autosave if no user interaction -
bearingLineWidth
float bearingLineWidth
-
calibrationChoice
int calibrationChoice
-
calibrationGpsSource
String calibrationGpsSource
-
clearProcessedDataAtStart
boolean clearProcessedDataAtStart
-
clearQueueAtStart
boolean clearQueueAtStart
-
cylindricalStartDistance
double cylindricalStartDistance
Distance travelled in surface duct, h0: 10*log(range) - 10*log(h0); -
defaultLength
double defaultLength
range in meters to dislpay on map -
deleteKey
String deleteKey
-
demuxType
DifarParameters.DifarDemuxTypes demuxType
-
difarFreqResponseFilterParams
FilterParams difarFreqResponseFilterParams
Stores paramaters to correct the frequency response for DIFAR buoys -
difarGramDividerPos
Integer difarGramDividerPos
vertical divider - possible between difargram and spectrogram -
favSpecies
LookupItem[] favSpecies
-
firstOrder
DifarParameters.FirstOrders firstOrder
-
groupList
ArrayList<String> groupList
-
hideVesselClips
boolean hideVesselClips
-
horizontalDividerPos
Integer horizontalDividerPos
used when the DIFARcontainers were joined - no longer -
keepRawDataTime
int keepRawDataTime
keep rawdata in rawdatablock for this amount of time may make this display dependant -
loadViewerClips
boolean loadViewerClips
-
maxSourceLevel
double maxSourceLevel
-
minimumOpacity
int minimumOpacity
-
multiChannelClips
boolean multiChannelClips
Spectrogram marks will generate clips from all channels instead of the one clicked on -
nextClassKey
String nextClassKey
-
nominalSourceLevel
double nominalSourceLevel
Nominal source level used to determine line lengths. -
nominalSpreading
double nominalSpreading
Nominal spreading, alpha: PL = alpha*Log(range); -
numberOfFavouriteWhales
int numberOfFavouriteWhales
not user configurable for now -
prevClassKey
String prevClassKey
-
processedDataKeepTime
int processedDataKeepTime
natural lifetime for the processed data datablock -
propLossModel
int propLossModel
Model to use for determining the length of a bearing line -
queuedDataKeepTime
int queuedDataKeepTime
natural lifetime for the queued data datablock-note there is also some control over this withing the clip generator history section of the hiding panel -
rawDataName
String rawDataName
name of unit to get raw data from including the frequency bands in which the multiplexed signals are within -
saveKey
String saveKey
-
saveWithoutCrossKey
String saveWithoutCrossKey
-
secondOrder
DifarParameters.SecondOrders secondOrder
-
secondsToPreceed
double secondsToPreceed
seconds to prepend to each clip to allow for signal locking of the demux algorithm -
selectedClassification
LookupItem selectedClassification
Automatically assign user-defined DIFAR classification when clicking on the Spectrogram -
showDifarGramFreqLimits
boolean showDifarGramFreqLimits
show detection limits on difargram - edited on right click -
showDifarGramKey
boolean showDifarGramKey
key on difargram - edited on right click -
showDifarGramSummary
boolean showDifarGramSummary
summary line - addition of amplitude/angle withing frequency bands on difargram - edited on right click -
showVesselBearings
boolean showVesselBearings
-
singleClickSave
boolean singleClickSave
save difargram when frequency/bearing selection is made -
Species
LookupItem Species
species to process a difarclip with. if null autoprocess dieabled -
speciesList
LookupList speciesList
List of species that can be selected for each DIFAR clip. -
speciesParams
ArrayList<DifarParameters.SpeciesParams> speciesParams
list of audio paramerters for processing difar clips - currently just vessel/whale but could be expanded for set for each species of whale -
timeScaledOpacity
boolean timeScaledOpacity
-
timeToFade
long timeToFade
check this compared with map show data time 30 min? -
triggerParams
ArrayList<DifarParameters.DifarTriggerParams> triggerParams
name of the detector module which can trigger difar clips to be made - eg whistle and moan detector currently limited to one detector -
useMaxSourceLevel
boolean useMaxSourceLevel
-
useSummaryLine
boolean useSummaryLine
If true use the average the energy across the classification frequency band in the difarGram, before picking the peak. Otherwise use the absolute maximum -
vesselClipLength
int vesselClipLength
-
vesselClipNumber
int vesselClipNumber
-
vesselClipSeparation
int vesselClipSeparation
-
zoomDifarFrequency
boolean zoomDifarFrequency
-
-
Class difar.DifarParameters.DifarTriggerParams
class DifarTriggerParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
channelSelection
int channelSelection
Channel selection, all, first, one, etc. -
dataName
String dataName
Data name of the trigger data block. -
enable
boolean enable
Enabled -
speciesLookupItem
LookupItem speciesLookupItem
-
speciesName
String speciesName
Name of species for auto-processing, or Default to send to DIFARQueuePanel
-
-
Class difar.DifarParameters.SpeciesParams
class SpeciesParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
difarGramIntensityScaleFactor
double difarGramIntensityScaleFactor
This controls the contrast/intensity scale in the difarGram by setting a the floor of the difarGram (lowest value) to be equal to max(difarGram[][])/intensityScaleFactor. Lower values (ie. 2 to 10) will yield better contrast near the maximum of the difarSurface. 10invalid input: '<'inensityScaleFactorinvalid input: '<'10e5) will lower the floor and reduce the contrast near the peaks. A low value is recommended since the peaks are usually the features of interest in the difarGram. -
difarOutputType
DifarParameters.DifarOutputTypes difarOutputType
-
FFTHop
int FFTHop
-
FFTLength
int FFTLength
-
lookupItemName
String lookupItemName
-
nAngleSections
int nAngleSections
DifarGram Grid spacing -
processFreqMax
float processFreqMax
-
processFreqMin
float processFreqMin
-
sampleRate
float sampleRate
-
useDetectionLimitsForTriggeredDetections
boolean useDetectionLimitsForTriggeredDetections
for maons, use the max/min of the detection rather than the whale defaults -
useMarkedBandsForSpectrogramClips
boolean useMarkedBandsForSpectrogramClips
-
-
-
Package difar.beamforming
-
Class difar.beamforming.BeamformParameters
class BeamformParameters extends Object implements Serializable- serialVersionUID:
- 10L
-
Serialized Fields
-
channelMap
int channelMap
-
difarFreqResponseFilterParams
FilterParams difarFreqResponseFilterParams
Stores paramaters to correct the frequency response for DIFAR buoys (not yet used) -
keepRawDataTime
int keepRawDataTime
keep rawdata in rawdatablock for this amount of time may make this display dependant -
noiseGpsSource
String noiseGpsSource
-
rawDataName
String rawDataName
name of unit to get raw data from including the frequency bands in which the multiplexed signals are within -
secondsToPreceed
double secondsToPreceed
seconds to prepend to each clip to allow for signal locking of the demux algorithm -
theta
Double[] theta
Steering angle of beamformer (theta) -
useGpsNoiseSource
boolean useGpsNoiseSource
-
-
Class difar.beamforming.BeamformParamsDialog
class BeamformParamsDialog extends PamDialog implements Serializable-
Serialized Fields
-
beamformControl
BeamformControl beamformControl
-
beamformParameters
BeamformParameters beamformParameters
-
newSampleRate
JLabel newSampleRate
-
noiseGpsSource
SourcePanel noiseGpsSource
-
rawDataSource
SourcePanel rawDataSource
-
sampleRate
float sampleRate
-
sourceSampleRate
JLabel sourceSampleRate
-
useGpsNoiseSource
JCheckBox useGpsNoiseSource
-
-
-
-
Package difar.calibration
-
Class difar.calibration.CalibrationDialog
class CalibrationDialog extends PamDialog implements Serializable-
Serialized Fields
-
calCorrectionDisplay
HistogramDisplay calCorrectionDisplay
-
calCorrectionHistogram
CalibrationHistogram calCorrectionHistogram
-
calibrationProcess
CalibrationProcess calibrationProcess
-
channel
int channel
-
difarControl
DifarControl difarControl
-
draggedMouseValue
Double draggedMouseValue
-
progressText
PamTextDisplay progressText
-
saveButton
JButton saveButton
-
stopButton
JButton stopButton
-
trueBearingDisplay
HistogramDisplay trueBearingDisplay
-
trueBearingHistogram
CalibrationHistogram trueBearingHistogram
-
-
-
-
Package difar.dataSelector
-
Class difar.dataSelector.DifarSelectParameters
class DifarSelectParameters extends DataSelectParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
channelEnabled
boolean[] channelEnabled
-
crossBearings
boolean crossBearings
-
maxFreq
double maxFreq
-
minAmplitude
double minAmplitude
-
minFreq
double minFreq
-
minLengthMillis
double minLengthMillis
-
numChannels
int numChannels
-
showOnlyCrossBearings
boolean showOnlyCrossBearings
-
speciesEnabled
boolean[] speciesEnabled
-
speciesList
LookupList speciesList
-
-
-
Package difar.demux
-
Class difar.demux.GreenridgeParams
class GreenridgeParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
dlpf
String dlpf
-
dlpfVals
double[] dlpfVals
-
drip
String drip
-
dripVals
double[] dripVals
-
exePath
String exePath
-
F_win
double F_win
-
Fn_acquire
double Fn_acquire
-
Fn_track
double Fn_track
-
Lock_hys_15
double Lock_hys_15
-
Lock_hys_75
double Lock_hys_75
-
Lock_threshold_15
double Lock_threshold_15
-
Lock_threshold_75
double Lock_threshold_75
-
Tagc_15
double Tagc_15
-
Tagc_75
double Tagc_75
-
Tau_lock_15
double Tau_lock_15
-
Tau_lock_75
double Tau_lock_75
-
tempDir
String tempDir
-
Tint_15
double Tint_15
-
Zeta_acquire
double Zeta_acquire
-
Zeta_track
double Zeta_track
-
-
-
Package difar.dialogs
-
Class difar.dialogs.DifarDisplayParamsDialog
class DifarDisplayParamsDialog extends PamDialog implements Serializable-
Serialized Fields
-
amplitudeScaledLineLength
JCheckBox amplitudeScaledLineLength
-
cylindricalRange
JRadioButton cylindricalRange
-
cylindricalStartDistance
JTextField cylindricalStartDistance
-
defaultLength
JTextField defaultLength
-
difarControl
DifarControl difarControl
-
difarParameters
DifarParameters difarParameters
-
fixedRange
JRadioButton fixedRange
-
geometricRange
JRadioButton geometricRange
-
lineWidth
JTextField lineWidth
-
maxSourceLevel
JTextField maxSourceLevel
-
minimumOpacity
JTextField minimumOpacity
-
rangeType
ButtonGroup rangeType
-
showVessels
JCheckBox showVessels
-
sourceLevel
JTextField sourceLevel
-
spreadingFactor
JTextField spreadingFactor
-
timeScaledOpacity
JCheckBox timeScaledOpacity
-
timeToFade
JTextField timeToFade
-
useMaxSourceLevel
JCheckBox useMaxSourceLevel
-
-
-
Class difar.dialogs.DifarParamsDialog
class DifarParamsDialog extends PamDialog implements Serializable-
Serialized Fields
-
advancedPanel
JPanel advancedPanel
-
audioPanels
difar.dialogs.DifarParamsDialog.AudioPanel[] audioPanels
-
automationPanel
JPanel automationPanel
-
autoProcess
JCheckBox autoProcess
-
autoSaveAngleOnly
JCheckBox autoSaveAngleOnly
-
autoSaveDResult
JCheckBox autoSaveDResult
-
autoSaveTime
JTextField autoSaveTime
-
calibrationSourcePanel
SourcePanel calibrationSourcePanel
-
clearProcessedDataAtStart
JCheckBox clearProcessedDataAtStart
-
clearQueueAtStart
JCheckBox clearQueueAtStart
-
defaultItem
Object defaultItem
-
deleteTextField
JTextField deleteTextField
-
demuxType
JComboBox<DifarParameters.DifarDemuxTypes> demuxType
-
difarControl
DifarControl difarControl
-
difarParameters
DifarParameters difarParameters
-
favSpecies
JComboBox[] favSpecies
-
favSpeciesPanel
JPanel favSpeciesPanel
-
firstOrder
JComboBox firstOrder
-
keepRawDataTime
JTextField keepRawDataTime
-
keyboardShortcutPanel
difar.dialogs.DifarParamsDialog.KeyboardShortcutPanel keyboardShortcutPanel
-
loadViewerClips
JCheckBox loadViewerClips
-
nextClassTextField
JTextField nextClassTextField
-
noAutoItem
Object noAutoItem
-
nullItem
Object nullItem
-
prevClassTextField
JTextField prevClassTextField
-
processedDataKeepTime
JTextField processedDataKeepTime
-
queuedDataKeepTime
JTextField queuedDataKeepTime
-
rawDataSource
SourcePanel rawDataSource
-
saveTextField
JTextField saveTextField
-
saveWithoutCrossTextField
JTextField saveWithoutCrossTextField
-
secondOrder
JComboBox secondOrder
-
secondsToPreceed
JTextField secondsToPreceed
-
triggerPanel
DifarParamsDialog.DifarDetectorPanel triggerPanel
-
triggerSource
SourcePanel triggerSource
-
useSummaryLine
JCheckBox useSummaryLine
-
vesselPanel
difar.dialogs.DifarParamsDialog.DifarVesselPanel vesselPanel
-
-
-
Class difar.dialogs.DifarParamsDialog.DifarDetectorPanel
class DifarDetectorPanel extends PamPanel implements Serializable-
Serialized Fields
-
acousticDataBlocks
ArrayList<PamDataBlock> acousticDataBlocks
-
dataLabels
JLabel[] dataLabels
-
enableBoxes
JCheckBox[] enableBoxes
-
settingsButtons
JButton[] settingsButtons
-
speciesLookups
JComboBox[] speciesLookups
-
triggerParams
DifarParameters.DifarTriggerParams[] triggerParams
-
-
-
Class difar.dialogs.SonobuoyDialog
class SonobuoyDialog extends StreamerDialog implements Serializable-
Serialized Fields
-
action
PamTextField action
-
addonPanel
PamBorderPanel addonPanel
-
buoyManager
SonobuoyManager buoyManager
-
calibration
PamTextField calibration
-
calStdDev
PamTextField calStdDev
-
deployTime
PamTextField deployTime
-
difarControl
DifarControl difarControl
-
endTime
PamTextField endTime
-
streamerDataUnit
StreamerDataUnit streamerDataUnit
-
-
-
-
Package difar.display
-
Class difar.display.DIFARGroupPanel
class DIFARGroupPanel extends PamPanel implements Serializable-
Serialized Fields
-
addGroup
PamButton addGroup
-
controlPanel
PamPanel controlPanel
-
difarControl
DifarControl difarControl
-
groupNameDialog
difar.display.DIFARGroupPanel.GroupNameDialog groupNameDialog
-
listModel
DefaultListModel<String> listModel
-
removeGroup
PamButton removeGroup
-
trackedGroup
JList trackedGroup
-
-
-
Class difar.display.DisplayNorthPanel
class DisplayNorthPanel extends PamPanel implements Serializable -
Class difar.display.DisplaySouthPanel
class DisplaySouthPanel extends PamPanel implements Serializable -
Class difar.display.SonobuoyManagerPanel
class SonobuoyManagerPanel extends PamPanel implements Serializable-
Serialized Fields
-
buoyManager
SonobuoyManager buoyManager
-
calibrationPanel
PamPanel calibrationPanel
-
calibrationTable
CalibrationTableView calibrationTable
-
difarControl
DifarControl difarControl
-
mainPanel
PamPanel mainPanel
-
scrollPane
PamScrollPane scrollPane
-
sonobuoyTable
PamTable sonobuoyTable
-
-
-
-
Package effortmonitor
-
Class effortmonitor.EffortParams
class EffortParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
outserScrollOnly
boolean outserScrollOnly
Only log outer scroll events when paging forwards, not every little movement. -
recentObjectives
LinkedList<String> recentObjectives
-
recentObservers
LinkedList<String> recentObservers
-
-
-
Package effortmonitor.swing
-
Class effortmonitor.swing.EffortDialog
class EffortDialog extends PamDialog implements Serializable-
Serialized Fields
-
allActions
JRadioButton allActions
-
effortControl
EffortControl effortControl
-
effortParams
EffortParams effortParams
-
objective
DBTextArea objective
-
observer
JComboBox<String> observer
-
oldObjectives
JComboBox<String> oldObjectives
-
outerOnly
JRadioButton outerOnly
-
-
-
-
Package envelopeTracer
-
Class envelopeTracer.EnvelopeDialog
class EnvelopeDialog extends PamDialog implements Serializable-
Serialized Fields
-
envelopeParams
EnvelopeParams envelopeParams
-
logOutput
JCheckBox logOutput
-
outputSampleRate
JTextField outputSampleRate
-
postFilterButton
JButton postFilterButton
-
postFilterText
JLabel postFilterText
-
preFilterButton
JButton preFilterButton
-
preFilterText
JLabel preFilterText
-
sampleRate
float sampleRate
-
sourcePanel
SourcePanel sourcePanel
-
-
-
Class envelopeTracer.EnvelopeParams
class EnvelopeParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
channelMap
int channelMap
-
dataSourceName
String dataSourceName
-
filterSelect
FilterParams filterSelect
-
logScale
boolean logScale
-
outputSampleRate
float outputSampleRate
-
postFilterParams
FilterParams postFilterParams
-
-
-
Package export
-
Class export.ExportParams
class ExportParams extends Object implements Serializable- serialVersionUID:
- 2L
-
-
Package export.wavExport
-
Class export.wavExport.WavExportOptions
class WavExportOptions extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
wavSaveChoice
int wavSaveChoice
Flag to indicate how to save files
-
-
Class export.wavExport.WavOptionsPanel
class WavOptionsPanel extends PamPanel implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
indvidualWav
JRadioButton indvidualWav
-
noZeroPad
JRadioButton noZeroPad
-
zeroPad
JRadioButton zeroPad
-
-
-
Package fftFilter
-
Class fftFilter.FFTFilterDialog
class FFTFilterDialog extends PamDialog implements Serializable-
Serialized Fields
-
bandPass
JRadioButton bandPass
-
bandStop
JRadioButton bandStop
-
fftFilterParams
FFTFilterParams fftFilterParams
-
highPass
JRadioButton highPass
-
highPassFreq
JTextField highPassFreq
-
lowPass
JRadioButton lowPass
-
lowPassFreq
JTextField lowPassFreq
-
sampleRate
double sampleRate
-
-
-
Class fftFilter.FFTFilterParams
class FFTFilterParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
filterBand
FilterBand filterBand
-
highPassFreq
double highPassFreq
-
lowPassFreq
double lowPassFreq
-
-
-
Package fftManager
-
Class fftManager.Complex
class Complex extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
imag
double imag
-
real
double real
-
-
Class fftManager.FFTDataDisplayOptions
class FFTDataDisplayOptions extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
maxVal
double maxVal
-
minVal
double minVal
-
plottedChannels
int plottedChannels
Channel (or Sequence) map to plot -
smoothingFactor
int smoothingFactor
-
useSpecValues
boolean useSpecValues
-
-
Class fftManager.FFTLengthModel
class FFTLengthModel extends AbstractSpinnerModel implements Serializable-
Serialized Fields
-
host
FFTLengthModeled host
-
newVal
int newVal
-
-
-
Class fftManager.FFTParameters
class FFTParameters extends Object implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
channelMap
int channelMap
-
clickPower
int clickPower
-
clickRemoval
boolean clickRemoval
-
clickThreshold
double clickThreshold
-
dataSource
int dataSource
-
dataSourceName
String dataSourceName
-
fftHop
int fftHop
-
fftLength
int fftLength
-
name
String name
-
spectrogramNoiseSettings
SpectrogramNoiseSettings spectrogramNoiseSettings
-
windowFunction
int windowFunction
-
-
Class fftManager.FFTParametersDialog
class FFTParametersDialog extends PamDialog implements Serializable-
Serialized Fields
-
clickPower
JTextField clickPower
-
clickRemoval
JCheckBox clickRemoval
-
clickRemoveMessage
String clickRemoveMessage
-
clickThreshold
JTextField clickThreshold
-
defaultOverlap
JButton defaultOverlap
-
fftHopData
JTextField fftHopData
-
fftLengthData
JTextField fftLengthData
-
fftLengthModel
FFTLengthModel fftLengthModel
-
fftLengthSpinner
JSpinner fftLengthSpinner
-
fftParameters
FFTParameters fftParameters
-
paramsChanged
boolean paramsChanged
-
resolutionPanel
ResolutionPanel resolutionPanel
-
sourcePanel
SourcePanel sourcePanel
-
spectrogramNoiseDialogPanel
SpectrogramNoiseDialogPanel spectrogramNoiseDialogPanel
-
tabbedPane
JTabbedPane tabbedPane
-
windowFunction
JComboBox windowFunction
-
-
-
Class fftManager.FFTPluginParamsDialog
class FFTPluginParamsDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
channelCheckBoxes
JCheckBox[] channelCheckBoxes
-
checkBoxPanel
JPanel checkBoxPanel
-
maxValTextField
JTextField maxValTextField
-
minValTextField
JTextField minValTextField
-
nameTextField
JTextField nameTextField
-
p
JPanel p
-
plotOptions
FFTDataDisplayOptions plotOptions
-
pluginPanel
FFTPluginPanelProvider.FFTPluginPanel pluginPanel
-
smoothingFactorTextField
JTextField smoothingFactorTextField
-
t
JPanel t
-
usedChannelList
int[] usedChannelList
-
useSpecValues
JCheckBox useSpecValues
-
valuesPanel
JPanel valuesPanel
-
-
-
Package fftManager.fftorganiser
-
Exception Class fftManager.fftorganiser.FFTDataException
class FFTDataException extends Exception implements Serializable- serialVersionUID:
- 1L
-
-
Package fileOfflineData
-
Class fileOfflineData.OfflineFileMapPoint
class OfflineFileMapPoint extends OfflineDataMapPoint implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
dataFile
File dataFile
-
-
Class fileOfflineData.OfflineFileParams
class OfflineFileParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
offlineFolder
String offlineFolder
-
subFolders
boolean subFolders
-
-
Class fileOfflineData.OfflineFileProgressDialog
class OfflineFileProgressDialog extends PamDialog implements Serializable-
Serialized Fields
-
progress
JProgressBar progress
-
progressText
JLabel progressText
-
-
-
Class fileOfflineData.OfflineFilesDialog
class OfflineFilesDialog extends PamDialog implements Serializable-
Serialized Fields
-
d3Params
OfflineFileParams d3Params
-
selectFolder
SelectFolder selectFolder
-
sensorControl
OfflineFileControl sensorControl
-
-
-
-
Package Filters
-
Class Filters.FilterDataSourceDialog
class FilterDataSourceDialog extends PamDialog implements Serializable-
Serialized Fields
-
outputDataBlock
PamDataBlock outputDataBlock
-
sourcePanel
SourcePanel sourcePanel
-
-
-
Class Filters.FilterDialog
class FilterDialog extends PamDialog implements Serializable-
Serialized Fields
-
filterDialogPanel
FilterDialogPanel filterDialogPanel
-
-
-
Class Filters.FilterParameters_2
class FilterParameters_2 extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
channelBitmap
int channelBitmap
-
filterParams
FilterParams filterParams
-
rawDataSource
String rawDataSource
-
-
Class Filters.FilterParams
class FilterParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
arbFreqs
double[] arbFreqs
-
arbGains
double[] arbGains
-
centreFreq
double centreFreq
Centre frequency for band pass filters. This is really only used with the filter designs forANSI standard filters used in the noise module. -
chebyGamma
double chebyGamma
-
filterBand
FilterBand filterBand
-
filterOrder
int filterOrder
-
filterType
FilterType filterType
-
highPassFreq
float highPassFreq
-
lastImportFile
File lastImportFile
Some extras for arbitrary filters. -
lowPassFreq
float lowPassFreq
-
passBandRipple
double passBandRipple
-
scaleType
int scaleType
Scale type just used for drawing dialog -
stopBandRipple
double stopBandRipple
-
-
-
Package generalDatabase
-
Class generalDatabase.DatabaseSpeedDialog
class DatabaseSpeedDialog extends PamDialog implements Serializable-
Serialized Fields
-
colItem
PamTableItem[] colItem
-
countItem
PamTableItem countItem
-
lastIndex
JTextField lastIndex
-
lastTime
JTextField lastTime
-
nWrites
JTextField nWrites
-
prevIndex
PamTableItem prevIndex
-
speedWorker
generalDatabase.DatabaseSpeedDialog.SpeedWorker speedWorker
-
tableDef
PamTableDefinition tableDef
-
timeItem
PamTableItem timeItem
-
-
-
Class generalDatabase.DBDialog
class DBDialog extends PamDialog implements Serializable-
Serialized Fields
-
dbControl
DBControl dbControl
-
dbParameters
DBParameters dbParameters
-
dialogBottomPanel
JPanel dialogBottomPanel
-
systemDialogPanel
SystemDialogPanel systemDialogPanel
-
systemList
JComboBox systemList
-
useAutoCommit
JCheckBox useAutoCommit
-
-
-
Class generalDatabase.DBMapMakingDialog
class DBMapMakingDialog extends PamDialog implements Serializable-
Serialized Fields
-
databaseName
JLabel databaseName
-
streamName
JLabel streamName
-
streamProgress
JProgressBar streamProgress
-
-
-
Class generalDatabase.DBOfflineDataMapPoint
class DBOfflineDataMapPoint extends OfflineDataMapPoint implements Serializable -
Class generalDatabase.DBParameters
class DBParameters extends Object implements Serializable- serialVersionUID:
- 0L
-
Class generalDatabase.MySQLParameters
class MySQLParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Class generalDatabase.UTCTimestamp
class UTCTimestamp extends Timestamp implements Serializable- serialVersionUID:
- 1L
-
-
Package generalDatabase.backup
-
Class generalDatabase.backup.DatabaseBackupSettings
class DatabaseBackupSettings extends BackupSettings implements Serializable- serialVersionUID:
- 1L
-
-
Package generalDatabase.clauses
-
Class generalDatabase.clauses.FixedClause
class FixedClause extends PamViewParameters implements Serializable-
Serialized Fields
-
clause
String clause
-
-
-
Class generalDatabase.clauses.UIDViewParameters
class UIDViewParameters extends PamViewParameters implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
clause
String clause
-
-
-
Package generalDatabase.dataExport
-
Class generalDatabase.dataExport.DataExportDialog
class DataExportDialog extends PamDialog implements Serializable-
Serialized Fields
-
cancelled
boolean cancelled
-
dataFilters
ArrayList<DataFilter> dataFilters
-
dataTable
JTable dataTable
-
exportSystem
DataExportSystem exportSystem
-
filterClause
JLabel filterClause
-
pamConnection
PamConnection pamConnection
-
tableCursor
PamCursor tableCursor
-
tableCursorRows
int tableCursorRows
-
tableDefinition
EmptyTableDefinition tableDefinition
-
tableModel
generalDatabase.dataExport.DataExportDialog.ExportTableModel tableModel
-
visibleTableItems
ArrayList<PamTableItem> visibleTableItems
-
-
-
Class generalDatabase.dataExport.DoubleValueParams
class DoubleValueParams extends ValueFilterParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
maxValue
double maxValue
-
minValue
double minValue
-
-
Class generalDatabase.dataExport.IntValueParams
class IntValueParams extends ValueFilterParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
maxValue
int maxValue
-
minValue
int minValue
-
-
Class generalDatabase.dataExport.TimeValueParams
class TimeValueParams extends ValueFilterParams implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
maxValue
long maxValue
-
minValue
long minValue
-
-
Class generalDatabase.dataExport.ValueFilterDialog
class ValueFilterDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
maxValue
JTextField maxValue
-
minValue
JTextField minValue
-
useMax
JCheckBox useMax
-
useMin
JCheckBox useMin
-
valueFilterParams
ValueFilterParams valueFilterParams
-
-
Class generalDatabase.dataExport.ValueFilterParams
class ValueFilterParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
useMax
boolean useMax
-
useMin
boolean useMin
-
-
-
Package generalDatabase.external
-
Class generalDatabase.external.CopyDialog
class CopyDialog extends PamDialog implements Serializable-
Serialized Fields
-
carryOn
boolean carryOn
-
copyDirection
CopyTypes copyDirection
-
copyManager
CopyManager copyManager
-
copySettings
JCheckBox copySettings
-
currentTable
JLabel currentTable
-
destDatabase
DBControl destDatabase
-
externalDatabase
DBControl externalDatabase
-
generalStatus
CopyStatus generalStatus
-
importOptions
JComboBox<ImportOption>[] importOptions
-
infoLabel
JLabel infoLabel
-
infoSynch
Object infoSynch
-
initialChecksComplete
boolean initialChecksComplete
-
nTables
int nTables
-
sourceDatabase
DBControl sourceDatabase
-
startButton
JButton startButton
-
tableDSTRecords
JLabel[] tableDSTRecords
-
tableInfo
List<TableInformation> tableInfo
-
tableNEWRecords
JLabel[] tableNEWRecords
-
tableProgress
JProgressBar tableProgress
-
tableSRCRecords
JLabel[] tableSRCRecords
-
totalProgress
JProgressBar totalProgress
-
-
-
-
Package generalDatabase.lookupTables
-
Class generalDatabase.lookupTables.LookupEditDialog
class LookupEditDialog extends PamDialog implements Serializable-
Serialized Fields
-
addButton
JButton addButton
-
colNames
String[] colNames
-
deleteButton
JButton deleteButton
-
downButton
JButton downButton
-
lookupList
LookupList lookupList
-
lookUpTables
LookUpTables lookUpTables
-
lutTable
JTable lutTable
-
lutTableDataModel
generalDatabase.lookupTables.LookupEditDialog.LUTTableDataModel lutTableDataModel
-
upButton
JButton upButton
-
-
-
Class generalDatabase.lookupTables.LookupItem
class LookupItem extends Object implements Serializable- serialVersionUID:
- 1L
-
Class generalDatabase.lookupTables.LookupList
class LookupList extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
deletedItems
Vector<LookupItem> deletedItems
-
listTopic
String listTopic
-
lutList
Vector<LookupItem> lutList
-
-
-
Package generalDatabase.sqlite
-
Class generalDatabase.sqlite.SQLiteParameters
class SQLiteParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
-
Package gpl
-
Class gpl.GPLParameters
class GPLParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
backgroundTimeSecs
double backgroundTimeSecs
Time constant for background whitener and also for blocking of data. -
blockParams
PamBlockParams blockParams
Params controlling blocking of data -
connectType
GPLParameters.ConnectType connectType
Type of contour connector: 4 = sides only, 8 = sides and diagonals. -
contourCut
double contourCut
cut in HT. Threshold for contour detection. -
contourMerge
ContourMerge contourMerge
What to do with multiple contour patches within a single 'detection' -
description
String description
Generic description for this parameter set used by the default parameters list. . -
fftSourceName
String fftSourceName
Data source name (FFT or beam former data) -
importFile
String importFile
Name of a file settings were imported from. Easiest to keep this separate from the freeform text. -
keepNullContours
boolean keepNullContours
Keep GPL detections even if they don't have any detected contours. -
maxCallLengthSeconds
double maxCallLengthSeconds
Used to select a peak from the detector. Would this be better used on individual contours ? -
maxFreq
double maxFreq
As minFreq above. -
minCallLengthSeconds
double minCallLengthSeconds
Used to select a peak from the detector. Would this be better used on individual contours ? -
minContourArea
int minContourArea
Min contour area to be kept. fixed value of 10 in HT -
minFreq
double minFreq
Minimum frequency for analysis. Currently used both in whitener and contour detector. If allowing multiple bands, may have to separate this for the different bands. -
minPeakGap
int minPeakGap
Minimum gap between peaks in the detector. -
noise_ceiling
double noise_ceiling
This is possibly better thought of as a 'low threshold', final detector finds regions that go above this, but only accepts them as detections if at least a bin goes above the higher 'thresh' value. -
sequenceMap
int sequenceMap
Channel / sequence map for processing (might replace this with full detection grouping ?) -
thresh
double thresh
See above. Main detection threshold . -
white_fac_x
double white_fac_x
Whitening factor for first whitening over backgroundTimeSecs duration of data. Used in Base3xWhitener and is a scaling factor used to increase the mean subtracted from the spectrogram, i.e. if X is the spectrogram and mu is the mean value of the spectrogram, then the white spectrogram is X-white_fac_x*mu. In Matlab code this is the 'fac' passed to whiten_matrix in GPL_whiten.
So far as I can see, this doesn't appear in H et al. If it did, it would scale the mu term in equations 17 and 18. -
xp1
double xp1
This is nu1 in H et al. eq 6. Used as xp1 in Matlab GPL_Quiet. This is the scale factor that will emphasise tonal signals.
Note that in code the spec is raised to this power to calculate bas, but then it all get's squared again to make baseline0, so this is nu1, not 2nu1. -
xp2
double xp2
This is nu2 in H et al. eq 6. Used as xp1 in Matlab GPL_Quiet. This is the scale factor that will emphasise broad band transients.
Note that in code the spec is raised to this power to calculate bas, but then it all get's squared again to make baseline0, so this is nu1, not 2nu1.
-
-
-
Package gpl.contour
-
Class gpl.contour.GPLContourPoint
class GPLContourPoint extends Point implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
signalExcess
double signalExcess
-
totalEnergy
double totalEnergy
-
-
-
Package gpl.dialog
-
Class gpl.dialog.GPLDialog
class GPLDialog extends PamDialog implements Serializable-
Serialized Fields
-
blockComboBox
EnumComboBox blockComboBox
-
connect4
JRadioButton connect4
-
connect8
JRadioButton connect8
-
contourArea
JTextField contourArea
-
contourCut
JTextField contourCut
-
contourMerge
EnumComboBox contourMerge
-
description
JTextArea description
-
fftResPanel
ResolutionPanel fftResPanel
-
gplControlledUnit
GPLControlledUnit gplControlledUnit
-
gplParams
GPLParameters gplParams
-
helpPoint
String helpPoint
-
importFile
JTextField importFile
-
lab_contourCut
FixedLabel lab_contourCut
-
lab_maxLength
JLabel lab_maxLength
-
lab_minGap
JLabel lab_minGap
-
lab_minlength
JLabel lab_minlength
-
lab_noise_ceil
JLabel lab_noise_ceil
-
lab_thresh
JLabel lab_thresh
-
lab_xp1
JLabel lab_xp1
-
lab_xp2
JLabel lab_xp2
-
maxFreq
JTextField maxFreq
-
maxFreqBin
JLabel maxFreqBin
-
maxLength
JTextField maxLength
-
minFreq
JTextField minFreq
-
minFreqBin
JLabel minFreqBin
-
minGap
JTextField minGap
-
minLength
JTextField minLength
-
noise_ceil
JTextField noise_ceil
-
nullContours
JCheckBox nullContours
-
sourcePanel
SourcePanel sourcePanel
-
thresh
JTextField thresh
-
whiteFactor
JTextField whiteFactor
-
whiteTime
JTextField whiteTime
-
xp1
JTextField xp1
-
xp2
JTextField xp2
-
-
-
-
Package GPS
-
Class GPS.GpsData
class GpsData extends LatLong implements Serializable- serialVersionUID:
- -7919081673367069167L
-
Serialized Fields
-
courseOverGround
double courseOverGround
renamed from heading -
dataOk
boolean dataOk
-
date
int date
-
day
int day
-
distanceFromLast
double distanceFromLast
-
fixType
String fixType
Fix type is supported by newer GPS units which have an additional three fields after the date - Magnetic variation, E/W indicator and 'Mode' = A=Autonomous, D=DGPS, E=DR, N = Output Data Not Valid The GGA string has a similar position fix indicator:
0 Fix not available or invalid
1 GPS SPS Mode, fix valid
2 Differential GPS, SPS Mode, fix valid
3-5 Not supported
6 Dead Reckoning Mode, fix valid -
gpsCalendar
Calendar gpsCalendar
-
hours
int hours
-
magneticHeading
Double magneticHeading
-
magneticVariation
Double magneticVariation
-
millis
int millis
-
mins
int mins
-
month
int month
-
pitch
Double pitch
hydrophone pitch in degrees. -
roll
Double roll
hydrophone roll in degrees. -
secs
int secs
-
speed
double speed
-
time
int time
-
timeInMillis
long timeInMillis
-
trueHeading
Double trueHeading
renamed from trueCourse -
year
int year
-
-
Class GPS.GPSParameters
class GPSParameters extends Object implements Serializable- serialVersionUID:
- 3L
-
Serialized Fields
-
allowWildcard
boolean allowWildcard
-
courseInterval
double courseInterval
Minimum course change for a dynamic read -
dimA
double dimA
distance from bow to antenna -
dimB
double dimB
distance from antenna to stern -
dimC
double dimC
distance from port side to antenna -
dimD
double dimD
distance from antenna to starboard side -
ggaInitials
String ggaInitials
-
headingNMEASource
String headingNMEASource
-
headingSmoothing
boolean headingSmoothing
GPS HEading Smoothing -
headingString
String headingString
String for true heading -
headingStringPos
int headingStringPos
position of data in headingString -
mainString
int mainString
Which strings to read -
nmeaSource
String nmeaSource
-
plotPredictedPosition
boolean plotPredictedPosition
On the map, work out where the ship will be and draw an arrow to that point -
predictionTime
int predictionTime
time for prediction arrow (seconds) -
readHeading
boolean readHeading
-
readInterval
int readInterval
Interval between reads in seconds -
readTrueHeading
boolean readTrueHeading
Attempt to read true heading information -
readType
int readType
storage and read options: Can either read everything that comes in or just read every n seconds, or be a bit more clever and read every n seconds OR whenever course or speed have changed by more than than some set amount. -
rmcInitials
String rmcInitials
String initials -
setClockOnStartup
boolean setClockOnStartup
-
smoothingFlag
boolean smoothingFlag
Flag indicating whether or not to smooth the GPS data -
smoothingTime
float smoothingTime
GPS smoothing time in seconds. -
speedInterval
double speedInterval
Minimum speed change for a dynamic read
-
-
Class GPS.GPSParametersDialog
class GPSParametersDialog extends PamDialog implements Serializable-
Serialized Fields
-
fieldNames
String[] fieldNames
-
gpsParameters
GPSParameters gpsParameters
-
headingPanel
GPS.GPSParametersDialog.HeadingPanel headingPanel
-
mainStringPanel
GPS.GPSParametersDialog.MainStringPanel mainStringPanel
-
predictPanel
GPS.GPSParametersDialog.PredictPanel predictPanel
-
readOptions
GPS.GPSParametersDialog.ReadOptions readOptions
-
shipDimensionsFields
ShipDimensionsFields shipDimensionsFields
-
shipDrawing
ShipDimensionsPanel shipDrawing
-
smoothingOptions
GPS.GPSParametersDialog.SmoothingOptions smoothingOptions
-
sourcePanel
SourcePanel sourcePanel
-
-
-
Class GPS.ImportGGADialog
class ImportGGADialog extends PamDialog implements Serializable-
Serialized Fields
-
checkBox
JCheckBox checkBox
-
day
JTextField day
-
frame
Window frame
-
importGPSData
ImportGPSData importGPSData
-
month
JTextField month
-
params
ImportGPSParams params
-
year
JTextField year
-
-
-
Class GPS.ImportGPSDialog
class ImportGPSDialog extends PamDialog implements Serializable-
Serialized Fields
-
browseButton
JButton browseButton
-
fileList
JComboBox<String> fileList
-
frame
Window frame
-
importGPSData
ImportGPSData importGPSData
-
params
ImportGPSParams params
-
-
-
Class GPS.ImportGPSParams
class ImportGPSParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Class GPS.ShipDimensionsDrawing
class ShipDimensionsDrawing extends JPanel implements Serializable-
Serialized Fields
-
antennaPos
Point antennaPos
-
arrowHead
int arrowHead
-
bow
double bow
-
relA
double relA
-
relB
double relB
-
relC
double relC
-
relD
double relD
-
scale
int scale
-
-
-
Class GPS.ShipDimensionsFields
class ShipDimensionsFields extends JPanel implements Serializable-
Serialized Fields
-
dimNames
String[] dimNames
-
shipDims
JTextField[] shipDims
-
-
-
Class GPS.ShipDimensionsPanel
class ShipDimensionsPanel extends JPanel implements Serializable -
Class GPS.UpdateClockDialog
class UpdateClockDialog extends JDialog implements Serializable-
Serialized Fields
-
autoUpdate
boolean autoUpdate
-
cancelButton
JButton cancelButton
-
gpsControl
GPSControl gpsControl
-
gpsTime
JTextField gpsTime
-
newDataCount
int newDataCount
-
nmeaCalendar
Calendar nmeaCalendar
-
pcTime
JTextField pcTime
-
setAlways
JCheckBox setAlways
-
setButton
JButton setButton
-
setOnNextString
boolean setOnNextString
-
timer
Timer timer
-
-
-
-
Package group3dlocaliser
-
Class group3dlocaliser.Group3DParams
class Group3DParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
algorithmName
String algorithmName
-
algorithmSpecificParams
Hashtable<String,
LocaliserAlgorithmParams> algorithmSpecificParams -
grouperParams
DetectionGrouperParams grouperParams
-
sourceName
String sourceName
-
-
-
Package group3dlocaliser.algorithm
-
Class group3dlocaliser.algorithm.LocaliserAlgorithmParams
class LocaliserAlgorithmParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
algorithmParameters
Serializable algorithmParameters
-
xtraSourceParameters
Serializable xtraSourceParameters
-
-
-
Package group3dlocaliser.algorithm.gridsearch
-
Class group3dlocaliser.algorithm.gridsearch.MFPGridSearchParams
class MFPGridSearchParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
fftLength
int fftLength
-
-
Class group3dlocaliser.algorithm.gridsearch.TOADGridParams
class TOADGridParams extends Object implements Serializable- serialVersionUID:
- 1L
-
-
Package group3dlocaliser.algorithm.hyperbolic
-
Class group3dlocaliser.algorithm.hyperbolic.HyperbolicParams
class HyperbolicParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
bootStrapN
int bootStrapN
Number of iterations to calculate error. More=more computational time per localisation; -
calcErrors
boolean calcErrors
Calculates errors from a random distribution of time delay errors
-
-
-
Package group3dlocaliser.algorithm.toadbase
-
Class group3dlocaliser.algorithm.toadbase.TOADBaseParams
class TOADBaseParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
channelBitmap
int channelBitmap
-
minCorrelatedGroups
int minCorrelatedGroups
Minimum number of channel groups that have at least one acceptable correlation value in them. -
minCorrelation
double minCorrelation
Minimum cross correlation value within a channel pair for it to be used in localisation -
minTimeDelays
int minTimeDelays
Minimum number of time delays that have an acceptable correlation value
-
-
-
Package group3dlocaliser.algorithm.toadmimplex
-
Class group3dlocaliser.algorithm.toadmimplex.MimplexParams
class MimplexParams extends MCMCParams2 implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
useFirstCombination
boolean useFirstCombination
Always use the first combination
-
-
-
Package group3dlocaliser.dataselector
-
Class group3dlocaliser.dataselector.Group3DDataSelectParams
class Group3DDataSelectParams extends DataSelectParams implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
maxChi2
double maxChi2
-
maxError
double maxError
-
minDF
int minDF
-
-
-
Package group3dlocaliser.grids
-
Class group3dlocaliser.grids.SphericalGridParams
class SphericalGridParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
angleStep
double angleStep
Angle step in degrees -
logRangeScale
boolean logRangeScale
-
nRanges
int nRanges
-
rangeRange
double[] rangeRange
-
-
-
Package group3dlocaliser.grouper
-
Class group3dlocaliser.grouper.DetectionGrouperParams
class DetectionGrouperParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
dataSelectMinimum
int dataSelectMinimum
-
dataSelectOption
int dataSelectOption
-
groupingChoice
int groupingChoice
-
maxPerGroup
int maxPerGroup
-
maxPerSubGroup
int maxPerSubGroup
-
minSubGroups
int minSubGroups
-
primaryDetGroup
int[] primaryDetGroup
The primary detection groups. The slected detection groups must be included in the combination for a loclaisation null means there is no primary group.
-
-
-
Package hfDaqCard
-
Class hfDaqCard.SmruDaqParameters
class SmruDaqParameters extends SoundCardParameters implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
channelFilterIndex
int[] channelFilterIndex
-
channelGainIndex
int[] channelGainIndex
-
channelMask
int channelMask
-
sampleRateIndex
int sampleRateIndex
-
-
-
Package IMU
-
Class IMU.IMUCalibrationDialog
class IMUCalibrationDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
frame
Window frame
-
heading
JTextField heading
-
params
IMUParams params
-
pitch
JTextField pitch
-
tilt
JTextField tilt
-
-
Class IMU.IMUImportDialog
class IMUImportDialog extends PamDialog implements Serializable-
Serialized Fields
-
comboBox
JComboBox<String> comboBox
-
importCSVB
JButton importCSVB
-
importCSVMethod
IMUImportMananger importCSVMethod
-
imuControl
IMUControl imuControl
-
imuParams
IMUParams imuParams
-
-
-
Class IMU.IMUSettingsDialog
class IMUSettingsDialog extends PamDialog implements Serializable-
Serialized Fields
-
imuParams
IMUParams imuParams
-
methodGroup
ButtonGroup methodGroup
-
panel
PamPanel panel
-
-
-
-
Package ishmaelComms
-
Class ishmaelComms.Client
class Client extends JFrame implements Serializable-
Serialized Fields
-
ambig
int ambig
-
angle
float angle
-
bearoffset
int bearoffset
-
bin
BufferedReader bin
-
cmndlist
String[] cmndlist
-
command
int command
-
datestr
String datestr
-
displayArea
JTextArea displayArea
-
end
float end
-
field
String[] field
-
GPS
boolean GPS
-
hifreq
float hifreq
-
i
int i
-
in
InputStream in
-
input
String input
-
isr
InputStreamReader isr
-
j
int j
-
key
String key
-
locdim
int locdim
-
lofreq
float lofreq
-
method
String method
-
n
int n
-
ni
int ni
-
NUMCMNDS
int NUMCMNDS
-
NUMFIELDS
int NUMFIELDS
-
numphones
int numphones
-
NUMPHONES
int NUMPHONES
-
out
OutputStream out
-
Pamdiscflag
boolean Pamdiscflag
-
PamSock
Socket PamSock
-
phonedim
int phonedim
-
PHONEDIM
int PHONEDIM
-
phonelocs
float[][] phonelocs
-
posoffset
int posoffset
-
pout
PrintWriter pout
-
quality
int quality
-
serverIP
String serverIP
-
showlocflag
boolean showlocflag
-
sockaddr
SocketAddress sockaddr
-
speed
float speed
-
start
float start
-
tag_cert
String tag_cert
-
timestr
String timestr
-
word
String word
-
xpos
float xpos
-
ypos
float ypos
-
zpos
float zpos
-
-
-
-
Package IshmaelDetector
-
Class IshmaelDetector.EnergySumParams
class EnergySumParams extends IshDetParams implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
adaptiveThreshold
boolean adaptiveThreshold
Use an averaging window adaptive noise floor. -
dontUpgrade
boolean dontUpgrade
Upgrade flag - use to test whether the deserialized settings object has the new fields. Set it to true now. If the object is from an old psf, then the field will be created with a default value of false. -
f0
double f0
-
f1
double f1
-
longFilter
double longFilter
The averaging value/damping factor for the adaptive noise floor. -
outPutSmoothing
boolean outPutSmoothing
Smooth the detector output -
ratiof0
double ratiof0
-
ratiof1
double ratiof1
-
shortFilter
Double shortFilter
The averaging value/damping factor for detector output. . -
spikeDecay
double spikeDecay
If there is a loud short sound then the adaptive noise filter will take along time to decay back to normal. If the result reaches spikeDecay*the current energy then a noise exponentially decays -
useLog
boolean useLog
Use a dB scale to calculate peaks -
useRatio
boolean useRatio
-
-
Class IshmaelDetector.EnergySumParamsDialog
class EnergySumParamsDialog extends IshDetParamsDialog implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
f0Data
JTextField f0Data
-
f1Data
JTextField f1Data
-
logCheckBox
JCheckBox logCheckBox
-
ratioF0Data
JTextField ratioF0Data
-
ratioF1Data
JTextField ratioF1Data
-
-
Class IshmaelDetector.IshDetParams
class IshDetParams extends Object implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
channelList
int channelList
Deprecated. -
groupedSourceParmas
GroupedSourceParameters groupedSourceParmas
Holds the parent data block, channel selections and grouping. -
inputDataSource
String inputDataSource
Deprecated.The input data source- string name of the datablock -
maxTime
double maxTime
The maximum time allowed over threshold in seconds. If zero then the max time is not used. -
minTime
double minTime
The time required over a threshold before a pam data unit is saved (seconds) -
name
String name
Deprecated. -
refractoryTime
double refractoryTime
Minimum time until next detection (seconds) -
smoothing
double smoothing
Smoothing of detection data in seconds. -
thresh
double thresh
-
vscale
double vscale
Deprecated.
-
-
Class IshmaelDetector.IshDetParamsDialog
class IshDetParamsDialog extends PamDialog implements Serializable-
Serialized Fields
-
ishDetParams
IshDetParams ishDetParams
-
minTimeData
JTextField minTimeData
-
refractoryTimeData
JTextField refractoryTimeData
-
sourcePanel
GroupedSourcePanel sourcePanel
-
threshData
JTextField threshData
-
vsData
JTextField vsData
-
-
-
Class IshmaelDetector.IshDisplayDialog
class IshDisplayDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
checkBoxAuto
JCheckBox checkBoxAuto
Check box for auto scaling. -
ishDisplayParams
IshDisplayParams ishDisplayParams
The display parameters. -
verticalScaleFactor
JTextField verticalScaleFactor
Text field for the vertical scale factor.
-
-
Class IshmaelDetector.IshDisplayParams
class IshDisplayParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
autoScale
boolean autoScale
Indicates whether the Ishmael spectrogram plugin autoscales. -
verticalScaleFactor
double verticalScaleFactor
The veretical scaling factor
-
-
Class IshmaelDetector.MatchFiltParams
class MatchFiltParams extends IshDetParams implements Serializable- serialVersionUID:
- 0L
-
Class IshmaelDetector.MatchFiltParamsDialog
class MatchFiltParamsDialog extends IshDetParamsDialog implements Serializable- serialVersionUID:
- 0L
-
Class IshmaelDetector.SgramCorrParams
class SgramCorrParams extends IshDetParams implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
segment
double[][] segment
-
spread
double spread
-
useLog
boolean useLog
-
-
Class IshmaelDetector.SgramCorrParamsDialog
class SgramCorrParamsDialog extends IshDetParamsDialog implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
linePanel
JPanel linePanel
-
logCheckBox
JCheckBox logCheckBox
-
segmentData
JTextField[][] segmentData
-
widthData
JTextField widthData
-
-
-
Package IshmaelLocator
-
Class IshmaelLocator.IshLocHyperbParams
class IshLocHyperbParams extends IshLocParams implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
nDimensions
int nDimensions
-
-
Class IshmaelLocator.IshLocHyperbParamsDialog
class IshLocHyperbParamsDialog extends IshLocParamsDialog implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
nDimsData
JTextField nDimsData
-
-
Class IshmaelLocator.IshLocParams
class IshLocParams extends Object implements Serializable- serialVersionUID:
- 0L
-
Class IshmaelLocator.IshLocParamsDialog
class IshLocParamsDialog extends PamDialog implements Serializable-
Serialized Fields
-
detectorCheckBox
JCheckBox detectorCheckBox
-
ishLocParams
IshLocParams ishLocParams
-
sourcePanel
SourcePanel sourcePanel
-
tAfterData
JTextField tAfterData
-
tBeforeData
JTextField tBeforeData
-
-
-
-
Package JSSHTerminal
-
Class JSSHTerminal.GraphicTerminal
class GraphicTerminal extends TerminalEvent implements Serializable-
Serialized Fields
-
charSet0
BufferedImage charSet0
-
charSetA
BufferedImage charSetA
-
charSetB
BufferedImage charSetB
-
identityTr
AffineTransform identityTr
-
lastBg
int lastBg
-
lastCharSet
int lastCharSet
-
lastChx
int lastChx
-
lastChy
int lastChy
-
lastFg
int lastFg
-
screen
BufferedImage screen
-
tmpBuffer
int[] tmpBuffer
-
tmpImg
BufferedImage tmpImg
-
tmpImgG
Graphics tmpImgG
-
-
-
Class JSSHTerminal.MainPanel
class MainPanel extends JPanel implements Serializable-
Serialized Fields
-
_host
String _host
-
_password
String _password
-
_user
String _user
-
command
String command
-
contentPanel
JPanel contentPanel
-
exitOnClose
boolean exitOnClose
-
parentFrame
JFrame parentFrame
-
scrollBar
JScrollBar scrollBar
-
scrollUpdate
boolean scrollUpdate
-
session
SSHSession session
-
textArea
TerminalEvent textArea
-
-
-
Class JSSHTerminal.MultiTerminal
class MultiTerminal extends JFrame implements Serializable-
Serialized Fields
-
commandLabel
JLabel commandLabel
-
commandText
JTextField commandText
-
connectBtn
JButton connectBtn
-
hostList
JTextArea hostList
-
hostListScroll
JScrollPane hostListScroll
-
innerPanel
JPanel innerPanel
-
loadButton
JButton loadButton
-
passwordLabel
JLabel passwordLabel
-
passwordText
JTextField passwordText
-
prefCommand
String prefCommand
-
prefHostList
String prefHostList
-
prefLastDir
String prefLastDir
-
prefPassword
String prefPassword
-
prefs
Preferences prefs
-
prefTermDim
String prefTermDim
-
prefUser
String prefUser
-
termDimLabel
JLabel termDimLabel
-
termDimText
JTextField termDimText
-
userLabel
JLabel userLabel
-
userText
JTextField userText
-
-
-
Class JSSHTerminal.TerminalEvent
class TerminalEvent extends JComponent implements Serializable-
Serialized Fields
-
_parent
MainPanel _parent
-
charHeight
int charHeight
-
charWidth
int charWidth
-
cursorBackground
Color cursorBackground
-
endSel
MouseEvent endSel
-
isDragging
boolean isDragging
-
scrollPos
int scrollPos
-
session
SSHSession session
-
size
Dimension size
-
startSel
MouseEvent startSel
-
termHeight
int termHeight
-
terminal
TerminalEmulator terminal
-
termWidth
int termWidth
-
-
-
Class JSSHTerminal.TextTerminal
class TextTerminal extends TerminalEvent implements Serializable-
Serialized Fields
-
charBuffer
char[] charBuffer
-
fontAscent
int fontAscent
-
-
-
-
Package KernelSmoothing
-
Class KernelSmoothing.KernelSmoothingDialog
class KernelSmoothingDialog extends PamDialog implements Serializable-
Serialized Fields
-
cancelButton
JButton cancelButton
-
okButton
JButton okButton
-
sourcePanel
SourcePanel sourcePanel
-
-
-
Class KernelSmoothing.KernelSmoothingParameters
class KernelSmoothingParameters extends Object implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
channelList
int channelList
-
fftBlockIndex
int fftBlockIndex
-
-
-
Package landMarks
-
Class landMarks.LandmarkData
class LandmarkData extends Object implements Serializable- serialVersionUID:
- 0L
-
Class landMarks.LandmarkDatas
class LandmarkDatas extends Object implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
data
ArrayList<LandmarkData> data
-
linkToDatabase
boolean linkToDatabase
-
tableName
String tableName
-
-
Class landMarks.LandmarkDialog
class LandmarkDialog extends PamDialog implements Serializable-
Serialized Fields
-
height
JTextField height
-
landmarkControl
LandmarkControl landmarkControl
-
landmarkData
LandmarkData landmarkData
-
latStrip
LatLongDialogStrip latStrip
-
longStrip
LatLongDialogStrip longStrip
-
name
JTextField name
-
pamSymbolSelector
PamSymbolSelector pamSymbolSelector
-
-
-
Class landMarks.LandmarksDialog
class LandmarksDialog extends PamDialog implements Serializable-
Serialized Fields
-
addButton
JButton addButton
-
dbImport
JButton dbImport
-
deleteButton
JButton deleteButton
-
editbutton
JButton editbutton
-
landmarkControl
LandmarkControl landmarkControl
-
landmarkDataModel
landMarks.LandmarksDialog.LandmarkDataModel landmarkDataModel
-
landmarkDatas
LandmarkDatas landmarkDatas
-
parentFrame
Window parentFrame
-
table
JTable table
-
tableName
JTextField tableName
-
-
-
-
Package Layout
-
Class Layout.PamAxisPanel
class PamAxisPanel extends JPanel implements Serializable-
Serialized Fields
-
autoInsets
boolean autoInsets
-
border
Border border
-
dualDisplay
boolean dualDisplay
Boolean indicating whether or not the axisPanel holds a dual display. A dual-display frame has 2 plot panels beside each other (left and right). The plot panels typically share a common vertical axis. Default to false so that existing classes don't get screwed up. UNTESTED - use at your own risk -
eastAxis
PamAxis eastAxis
axis to be displayed on any or all of the four sides of a plot window (innerPanel below) -
innerPanel
JPanel innerPanel
The main plot panel that the axis are drawn around. -
leftPlotPanel
JComponent leftPlotPanel
Define the left plot panel for a dual-display. A dual-display frame has 2 plot panels beside each other (left and right). The plot panels typically share a common vertical axis. UNTESTED - use at your own risk -
minEast
int minEast
-
minNorth
int minNorth
-
minSouth
int minSouth
-
minWest
int minWest
-
northAxis
PamAxis northAxis
axis to be displayed on any or all of the four sides of a plot window (innerPanel below) -
plotPanel
JComponent plotPanel
If the plot panel contains border components such as a scroll bar, then the axis may need to be drawn relative to a slightly different panel. Plot panel is basically a component of innerPanel and if it is not null, axis will be drawn outside the inner panel, but lined up with the plotPanel. -
rightPlotPanel
JComponent rightPlotPanel
Define the right plot panel for a dual-display. A dual-display frame has 2 plot panels beside each other (left and right). The plot panels typically share a common vertical axis. UNTESTED - use at your own risk -
southAxis
PamAxis southAxis
axis to be displayed on any or all of the four sides of a plot window (innerPanel below) -
titleLabel
JLabel titleLabel
-
westAxis
PamAxis westAxis
axis to be displayed on any or all of the four sides of a plot window (innerPanel below)
-
-
-
Class Layout.PamInternalFrame
class PamInternalFrame extends JInternalFrame implements Serializable-
Serialized Fields
-
emptyBorder
EmptyBorder emptyBorder
-
framePlots
PamFramePlots framePlots
-
graphLayout
PamGraphLayout graphLayout
-
lastSize
Dimension lastSize
-
-
-
-
Package levelMeter
-
Class levelMeter.LevelMeterDialog
class LevelMeterDialog extends PamDialog implements Serializable-
Serialized Fields
-
levelMeterControl
LevelMeterControl levelMeterControl
-
levelMeterParams
LevelMeterParams levelMeterParams
-
peak
JRadioButton peak
-
rms
JRadioButton rms
-
scaleRange
JTextField scaleRange
-
scaleReference
JComboBox<String> scaleReference
-
sourcePanel
SourcePanel sourcePanel
-
-
-
Class levelMeter.LevelMeterParams
class LevelMeterParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
dataName
String dataName
-
minLevel
int minLevel
-
scaleReference
int scaleReference
-
scaleType
int scaleType
-
-
-
Package likelihoodDetectionModule
-
Class likelihoodDetectionModule.AcquisitionSettings
class AcquisitionSettings extends Object implements Serializable- serialVersionUID:
- 34462L
-
Serialized Fields
-
maxBandwidthHz
double maxBandwidthHz
The maximum bandwidth of the data source. -
minBandwidthHz
double minBandwidthHz
The minimum bandwidth of the data source. -
numberChannels
int numberChannels
The number of channels in the audio data. -
preampGainDb
double preampGainDb
The preamplifier gain of the audio data. -
samplingRateHz
float samplingRateHz
The sampling rate of the audio data. -
sourceName
String sourceName
The name of the acquisition source module. -
sourceNumber
int sourceNumber
The number assigned to the source module by the pamguard controller. -
voltageRange
double voltageRange
The peak-to-peak voltage range of the audio data.
-
-
Class likelihoodDetectionModule.CheckRenderer
class CheckRenderer extends JPanel implements Serializable- serialVersionUID:
- 24323L
-
Serialized Fields
-
checkBox
JCheckBox checkBox
The check box. -
label
CheckRenderer.TreeLabel label
The label. -
model
TreeModel model
The model. -
nodeName
String nodeName
The node name. -
showCheckbox
boolean showCheckbox
The show checkbox.
-
-
Class likelihoodDetectionModule.CheckRenderer.TreeLabel
class TreeLabel extends JLabel implements Serializable- serialVersionUID:
- 902734L
-
Serialized Fields
-
hasFocus
boolean hasFocus
The has focus. -
isSelected
boolean isSelected
The is selected.
-
-
Class likelihoodDetectionModule.ConfigurationDialogSettings
class ConfigurationDialogSettings extends Object implements Serializable- serialVersionUID:
- 234123L
-
Serialized Fields
-
expandedState
String expandedState
The expanded state. -
firstColumnWidth
int firstColumnWidth
The first column width. -
secondColumnWidth
int secondColumnWidth
The second column width.
-
-
Class likelihoodDetectionModule.GuardBand
class GuardBand extends Object implements Serializable- serialVersionUID:
- 561L
-
Serialized Fields
-
associatedSignalBandIdentifier
String associatedSignalBandIdentifier
The identifier of the signal band that this guard band should be associated with. -
backgroundSeconds
double backgroundSeconds
The background seconds. -
endFrequencyHz
double endFrequencyHz
The end frequency hz. -
frequencyLimits
double[] frequencyLimits
The frequency's limits. -
identifier
String identifier
The identifier of this guard band. The configuration dialog should ensure that this value is unique for a TargetConfiguration -
secondsLimits
double[] secondsLimits
The seconds' limits. -
signalSeconds
double signalSeconds
The signal seconds. -
startFrequencyHz
double startFrequencyHz
The start frequency hz.
-
-
Class likelihoodDetectionModule.LikelihoodDetectionParameters
class LikelihoodDetectionParameters extends Object implements Serializable- serialVersionUID:
- 555L
-
Serialized Fields
-
acquisitionSettings
AcquisitionSettings acquisitionSettings
The acquisition settings (the audio data source). -
configurationDialogSettings
ConfigurationDialogSettings configurationDialogSettings
The configuration dialog settings. These are non-processing related values that are used in managing the display and layout of the module's configuration dialog - and it's nice to have them persistent between program executions. -
selectedChannels
int selectedChannels
The selected channels from the audio data source. -
targetConfigurations
ArrayList<TargetConfiguration> targetConfigurations
The target configurations that have been configured for the module. This is made public just to make life a little easier. It isn't expected that encapsulation of this member is necessary.
-
-
Class likelihoodDetectionModule.LikelihoodDetectionParametersDialog
class LikelihoodDetectionParametersDialog extends PamDialog implements Serializable- serialVersionUID:
- 559L
-
Serialized Fields
-
accepted
boolean accepted
The accepted state of the dialog (i.e., whether OK has been selected). -
likelihoodParameters
LikelihoodDetectionParameters likelihoodParameters
A pointer to the persistent parameters for the likelihood detector. -
sourcePanel
SourcePanel sourcePanel
The PamView construct that allows for the selection of an acquisition source and channels. -
treeTable
TreeTable treeTable
The custom TreeTable widget, that forms the main area for configuration of the detector -
treeTableModel
TreeTableModel treeTableModel
The custom TreeTable widget's model, that forms the main area for configuration of the detector.
-
-
Class likelihoodDetectionModule.LikelihoodFFTParameters
class LikelihoodFFTParameters extends Object implements Serializable- serialVersionUID:
- 563L
-
Serialized Fields
-
actualFreqResolution
double actualFreqResolution
The actual freq resolution, calculated from the requested frequency resolution. -
actualTimeResolution
double actualTimeResolution
The actual time resolution, calculated from the requested time resolution. -
channelMap
int channelMap
The channel map. -
fftHop
int fftHop
The fft hop. -
fftSize
int fftSize
The fft size. -
numberAverages
int[] numberAverages
The number averages. -
overlap
double[] overlap
The fft overlap. -
sourceNumber
int sourceNumber
The source number of the audio data source to be used (i.e., the acquisition module).
-
-
Class likelihoodDetectionModule.NewBandNameDialog
class NewBandNameDialog extends JDialog implements Serializable- serialVersionUID:
- 121213L
-
Serialized Fields
-
accepted
boolean accepted
The accepted. -
bandType
NewBandNameDialog.BandType bandType
The band type. -
cancelButton
JButton cancelButton
The cancel button. -
existingIdentifiers
ArrayList<String> existingIdentifiers
The existing identifiers. The dialog will enforce a unique identifier be specified. -
identifierField
JTextField identifierField
The identifier field. -
mainPanel
JPanel mainPanel
The main panel. -
message
JLabel message
The message. -
okButton
JButton okButton
The ok button.
-
-
Class likelihoodDetectionModule.SignalBand
class SignalBand extends Object implements Serializable- serialVersionUID:
- 560L
-
Serialized Fields
-
backgroundSeconds
double backgroundSeconds
The background seconds. -
endFrequencyHz
double endFrequencyHz
The end frequency hz. -
frequencyLimits
double[] frequencyLimits
The frequency's limits. -
guardBandThresholdDb
double guardBandThresholdDb
The guard band threshold, in db. -
guardBandThresholdLimits
double[] guardBandThresholdLimits
The guard band threshold's limits. -
identifier
String identifier
The signal band identifier. The configuration dialog will ensure that this is unique for each TargetDetection object. -
inBandThresholdDb
double inBandThresholdDb
The in-band threshold, in db. -
inBandThresholdLimits
double[] inBandThresholdLimits
The in-band threshold's limits. -
secondsLimits
double[] secondsLimits
The seconds between detection's limits. -
signalSeconds
double signalSeconds
The signal seconds. -
startFrequencyHz
double startFrequencyHz
The start frequency hz.
-
-
Class likelihoodDetectionModule.TargetConfiguration
class TargetConfiguration extends Object implements Serializable- serialVersionUID:
- 562L
-
Serialized Fields
-
acquisitionSettings
AcquisitionSettings acquisitionSettings
The acquisition settings used to computer various parameter limits and other settings. -
algorithm
NormalizerProcess.NormalizerAlgorithm algorithm
The algorithm being used. -
channelMap
int channelMap
The channel map in use. -
fftParameters
LikelihoodFFTParameters fftParameters
The calculated fft parameters that will be required to run this configuration. -
frequencyResolution
double frequencyResolution
The frequency resolution. -
frequencyResolutionLimits
double[] frequencyResolutionLimits
The frequency resolution limits. -
guardBands
ArrayList<GuardBand> guardBands
The guard bands. -
identifier
String identifier
The identifier for the configuration. The configuration dialog will ensure that this string is unique for the configuration -
referenceGain
double referenceGain
The reference gain. -
secondsBetweenDetections
double secondsBetweenDetections
The seconds between detections. -
secondsBetweenDetectionsLimits
double[] secondsBetweenDetectionsLimits
The seconds between detections limits. -
signalBands
ArrayList<SignalBand> signalBands
The signal bands. -
state
TargetConfiguration.State state
The state. -
timeResolution
double timeResolution
The time resolution. -
timeResolutionLimits
double[] timeResolutionLimits
The time resolution limits.
-
-
Class likelihoodDetectionModule.TargetConfigurationNameDialog
class TargetConfigurationNameDialog extends JDialog implements Serializable- serialVersionUID:
- 121212L
-
Serialized Fields
-
accepted
boolean accepted
The accepted. -
cancelButton
JButton cancelButton
The cancel button. -
existingIdentifiers
ArrayList<String> existingIdentifiers
The existing identifiers. -
identifierField
JTextField identifierField
The identifier field. -
mainPanel
JPanel mainPanel
The main panel. -
message
JLabel message
The message. -
okButton
JButton okButton
The ok button.
-
-
Class likelihoodDetectionModule.TreeTable
class TreeTable extends JTable implements Serializable- serialVersionUID:
- 3247234L
-
Serialized Fields
-
model
TreeTableModelAdapter model
The tree table's back-end model adapter.- See Also:
-
numberFormatter
NumberFormatter numberFormatter
The number formatter used within the tree table to format the real numbers. -
popupMenu
JPopupMenu popupMenu
The popup menu that is displayed when the user right-clicks inside the tree table. -
tree
TreeTable.TreeTableCellRenderer tree
The tree table's cell custom cell renderer. -
treeTableCellEditor
TreeTable.TreeTableCellEditor treeTableCellEditor
The custom tree table cell editor.
-
-
Class likelihoodDetectionModule.TreeTable.AlgorithmComboBoxEditor
class AlgorithmComboBoxEditor extends DefaultCellEditor implements Serializable- serialVersionUID:
- 23946L
-
Class likelihoodDetectionModule.TreeTable.AssociatedSignalBandEditor
class AssociatedSignalBandEditor extends DefaultCellEditor implements Serializable- serialVersionUID:
- 2903234L
-
Class likelihoodDetectionModule.TreeTable.DoubleEditor
class DoubleEditor extends DefaultCellEditor implements Serializable- serialVersionUID:
- 23476690L
-
Serialized Fields
-
component
Component component
The component. -
max
double max
The max. -
min
double min
The min.
-
-
Class likelihoodDetectionModule.TreeTable.TreeTableCellRenderer
class TreeTableCellRenderer extends JTree implements Serializable- serialVersionUID:
- 272362234L
-
Serialized Fields
-
visibleRow
int visibleRow
Last table/tree row asked to renderer. This is used to keep track of widget height and next-point-of-insert.
-
-
Class likelihoodDetectionModule.TreeTableModelAdapter
class TreeTableModelAdapter extends AbstractTableModel implements Serializable- serialVersionUID:
- 7773263L
-
Serialized Fields
-
tree
JTree tree
The tree part of the internals of the TreeTable. Some calls will be made directly on it. -
treeTableModel
TreeTableModel treeTableModel
The tree table model that this model wraps.
-
-
-
Package listening
-
Class listening.ListeningDialog
class ListeningDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
addButton
JButton addButton
-
downButton
JButton downButton
-
editButton
JButton editButton
-
listeningControl
ListeningControl listeningControl
-
listeningParameters
ListeningParameters listeningParameters
-
removeButton
JButton removeButton
-
table
JTable table
-
tableData
listening.ListeningDialog.LTableData tableData
-
upButton
JButton upButton
-
-
Class listening.ListeningParameters
class ListeningParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
effortStati
Vector<String> effortStati
-
hydrophones
int hydrophones
-
nVolumes
int nVolumes
-
speciesList
Vector<SpeciesItem> speciesList
-
-
Class listening.SpeciesItem
class SpeciesItem extends Object implements Serializable- serialVersionUID:
- 1L
-
-
Package loc3d_Thode
-
Class loc3d_Thode.TowedArray3DParametersDialog
class TowedArray3DParametersDialog extends PamDialog implements Serializable-
Serialized Fields
-
alglist
JComboBox alglist
-
fine_tune_tdd_checkbox
JCheckBox fine_tune_tdd_checkbox
-
fine_tune_tds_checkbox
JCheckBox fine_tune_tds_checkbox
-
maxTimeDelay
JTextField maxTimeDelay
-
maxTimeQueue
JTextField maxTimeQueue
-
minIciNum
JTextField minIciNum
-
percentErrorAngle
JTextField percentErrorAngle
-
percentErrorEchoTime
JTextField percentErrorEchoTime
-
sourcePanel
SourcePanel sourcePanel
-
towedArray3DController
TowedArray3DController towedArray3DController
-
towedArray3DProcessParameters
TowedArray3DProcessParameters towedArray3DProcessParameters
-
yes_checkbox
JCheckBox yes_checkbox
-
-
-
Class loc3d_Thode.TowedArray3DProcessParameters
class TowedArray3DProcessParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
algchoice
int algchoice
Choose algorithm -
channelList
int channelList
Bitmap of channels to be used - use all available. -
detectorDataBlock
int detectorDataBlock
Use first detector block in model -
fine_tune_tdd
boolean fine_tune_tdd
-
fine_tune_tds
boolean fine_tune_tds
-
maxTimeDelay
long maxTimeDelay
Maximum time delay to assoicate with a multipath -
maxTimeQueue
long maxTimeQueue
Amount of time to keep potential 3-D detections in memory, msec -
minICINum
int minICINum
How many multipath assumed to exist per event(anchor)? -
percentErrorAngle
long percentErrorAngle
-
percentICIMatchError
long percentICIMatchError
-
yes_process
boolean yes_process
-
-
-
Package Localiser
-
Class Localiser.DelayMeasurementParams
class DelayMeasurementParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
delayFilterParams
FFTFilterParams delayFilterParams
Parameters for bearing filter -
envelopeBearings
boolean envelopeBearings
Measure bearings from the waveform envelope, not the full wavefrom. -
filterBearings
boolean filterBearings
Filter data prior to bearing measurement -
leadingEdgeSearchRegion
int[] leadingEdgeSearchRegion
-
restrictedBins
int restrictedBins
The number of restrcited bins to use. -
upSample
int upSample
Waveform upsampling for correlation measurements. Will only put an option for 1 or 2, but leave generic for the future ... -
useLeadingEdge
boolean useLeadingEdge
When using envelope, just take the leading edge. -
useRestrictedBins
boolean useRestrictedBins
Restrict the number of bins from sample 0 to use- helps with detection snippets that contain echoes
-
-
-
Package Localiser.algorithms.genericLocaliser.MCMC
-
Class Localiser.algorithms.genericLocaliser.MCMC.MCMCParams2
class MCMCParams2 extends Object implements Serializable- serialVersionUID:
- 3L
-
Serialized Fields
-
chainAnalysis
int chainAnalysis
Parameters for analysis of chains -
chainStartDispersion
double[][] chainStartDispersion
Where in parameter space the chains should start. Each value in the array is for one dimension. When chains start a random number between the two numbers is chosen as the start position in that dimension for the chain. -
clusterAnalysis
int clusterAnalysis
The type of cluster analysis to use to merge the different chains if they converge on the same or ambiguous results. See K_MEANS and NONE constants. -
cylindricalCoOrdinates
boolean cylindricalCoOrdinates
Use cylindrical jumps. -
jumpSize
double[] jumpSize
The size of Gaussian distribution for the jump in each dimension; -
kmeanAttempts
int kmeanAttempts
The number of times to perform a k-means algorithm on results The algorithm starts clusters at random locations. -
kmeansIterations
int kmeansIterations
The number of iterations for each k-means attempt. K-means converges to a result but requires a certain number of iteration to do so. -
maxClusterSize
double maxClusterSize
-
nKMeans
Integer nKMeans
-
numberOfChains
int numberOfChains
The number of seperate chains to use in the simulation -
numberOfJumps
int numberOfJumps
The number of jumps in each Markov chain to attempt. (not the total successful jumps that should be reached before the chain ends) -
percentageToIgnore
double percentageToIgnore
-
-
-
Package Localiser.algorithms.genericLocaliser.MCMC.old
-
Class Localiser.algorithms.genericLocaliser.MCMC.old.MCMCParams
class MCMCParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
chainAnalysis
int chainAnalysis
-
chainStartDispersion
double chainStartDispersion
-
clusterAnalysis
int clusterAnalysis
-
cylindricalCoOrdinates
boolean cylindricalCoOrdinates
-
jumpSize
double jumpSize
-
maxClusterSize
double maxClusterSize
-
nKMeans
Integer nKMeans
-
numberOfChains
Integer numberOfChains
-
numberOfJumps
Integer numberOfJumps
-
percentageToIgnore
double percentageToIgnore
-
timeError
double timeError
-
-
Class Localiser.algorithms.genericLocaliser.MCMC.old.MCMCParamsDialog
class MCMCParamsDialog extends PamDialog implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
ChainStartDispersion
JTextField ChainStartDispersion
-
cylindricalCoOrdinates
JCheckBox cylindricalCoOrdinates
-
Error
JTextField Error
-
errors
PamPanel errors
The panel which holds controsl for changing the error. -
jumpSize
JTextField jumpSize
-
kMeansClustering
JRadioButton kMeansClustering
-
mainPanel
PamPanel mainPanel
-
mCMCParameters
MCMCParams mCMCParameters
Other MCMC params - legacy settings class. -
mCMCParameters2
MCMCParams2 mCMCParameters2
MCMC params for loclaiser -
mCMCPropPanel
PamPanel mCMCPropPanel
-
minDistance
JTextField minDistance
-
nClusters
JTextField nClusters
-
noClustering
JRadioButton noClustering
-
numberOfChains
JTextField numberOfChains
-
numberOfJumps
JTextField numberOfJumps
-
percentage
JTextField percentage
-
percentageButton
JRadioButton percentageButton
-
-
-
Package Localiser.algorithms.timeDelayLocalisers.bearingLoc
-
Class Localiser.algorithms.timeDelayLocalisers.bearingLoc.DelayOptionsDialog
class DelayOptionsDialog extends PamDialog implements Serializable-
Serialized Fields
-
delayMeasurementParams
DelayMeasurementParams delayMeasurementParams
-
delayOptionsPanel
DelayOptionsPanel delayOptionsPanel
-
-
-
Class Localiser.algorithms.timeDelayLocalisers.bearingLoc.MLGridBearingLocaliser2.LocaliserParams
class LocaliserParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
phiStep
double phiStep
-
thetaStep
double thetaStep
-
-
-
Package Localiser.algorithms.timeDelayLocalisers.hyperbolic
-
Class Localiser.algorithms.timeDelayLocalisers.hyperbolic.HyperbolicParams
class HyperbolicParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
bootStrapN
int bootStrapN
Number of iterations to calculate error. More=more computational time per localisation; -
calcErrors
boolean calcErrors
Calculates errors from a random distribution of time delay errors -
crossCorrError
double crossCorrError
The cross correlation error in bins. -
currentType
int currentType
The current type of hyperbolic localiser to use.
-
-
-
Package Localiser.controls
-
Class Localiser.controls.RawOrFFTParams
class RawOrFFTParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
fftHop
int fftHop
-
fftLength
int fftLength
-
sourceName
String sourceName
-
windowFunction
int windowFunction
-
-
Class Localiser.controls.TOADTimingParams
class TOADTimingParams extends DelayMeasurementParams implements Serializable- serialVersionUID:
- 1L
-
-
Package loggerForms
-
Class loggerForms.FormPlotOptions
class FormPlotOptions extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
controlChoices
boolean[][] controlChoices
-
-
Class loggerForms.FormsDataUnitEditDialog
class FormsDataUnitEditDialog extends PamDialog implements Serializable-
Serialized Fields
-
formDataUnit
FormsDataUnit formDataUnit
-
formDescription
FormDescription formDescription
-
loggerForm
LoggerForm loggerForm
-
-
-
Class loggerForms.FormSettings
class FormSettings extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
splitPanelPosition
Integer splitPanelPosition
-
-
Class loggerForms.FormsParameters
class FormsParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
allowViewerChanges
boolean allowViewerChanges
-
-
Class loggerForms.FormsPlotOptionsDialog
class FormsPlotOptionsDialog extends PamDialog implements Serializable-
Serialized Fields
-
answer
boolean answer
-
formsControl
FormsControl formsControl
-
optionsPanels
ArrayList<FormPlotOptionsPanel> optionsPanels
-
-
-
Class loggerForms.LatLongTime
class LatLongTime extends LatLong implements Serializable-
Serialized Fields
-
timeInMillis
Long timeInMillis
-
-
-
Class loggerForms.LoggerFormPanel
class LoggerFormPanel extends PamPanel implements Serializable-
Serialized Fields
-
loggerForm
LoggerForm loggerForm
-
-
-
Class loggerForms.LoggerSubTabbedPane
class LoggerSubTabbedPane extends PamTabbedPane implements Serializable-
Serialized Fields
-
defaultColor
PamColors.PamColor defaultColor
-
formDescription
FormDescription formDescription
-
-
-
Class loggerForms.LoggerTabbedPane
class LoggerTabbedPane extends PamTabbedPane implements Serializable-
Serialized Fields
-
defaultColor
PamColors.PamColor defaultColor
-
formsControl
FormsControl formsControl
-
-
-
-
Package loggerForms.controls
-
Class loggerForms.controls.LoggerFormLabel
class LoggerFormLabel extends PamLabel implements Serializable-
Serialized Fields
-
loggerForm
LoggerForm loggerForm
-
-
-
-
Package loggerForms.dataselect
-
Class loggerForms.dataselect.ControlDataSelParams
class ControlDataSelParams extends DataSelectParams implements Serializable- serialVersionUID:
- 1L
-
Class loggerForms.dataselect.FormDataSelParams
class FormDataSelParams extends DataSelectParams implements Serializable-
Serialized Fields
-
controlName
String controlName
Form params currently only allow data selection from a single control. For finding controls, this will be based on control titles (.getTitle()) -
controlParams
ControlDataSelParams controlParams
-
-
-
Class loggerForms.dataselect.LookupDataSelParams
class LookupDataSelParams extends ControlDataSelParams implements Serializable- serialVersionUID:
- 1L
-
-
Package loggerForms.formdesign
-
Class loggerForms.formdesign.FormEditDialog
class FormEditDialog extends PamDialog implements Serializable-
Serialized Fields
-
editControlPanel
EditControlPanel editControlPanel
-
editPropertyPanel
EditPropertyPanel editPropertyPanel
-
formCancelled
boolean formCancelled
-
formDescription
FormDescription formDescription
-
formEditor
FormEditor formEditor
-
previewButton
JButton previewButton
-
selectedTitle
ControlTitle selectedTitle
-
-
-
Class loggerForms.formdesign.FormList
- serialVersionUID:
- 1L
-
Class loggerForms.formdesign.PreviewDialog
class PreviewDialog extends PamDialog implements Serializable-
Serialized Fields
-
loggerForm
LoggerForm loggerForm
-
-
-
-
Package loggerForms.monitor
-
Class loggerForms.monitor.FormsSelectorParams
class FormsSelectorParams extends DataSelectParams implements Serializable- serialVersionUID:
- 1L
-
-
Package ltsa
-
Class ltsa.LtsaDialog
class LtsaDialog extends PamDialog implements Serializable-
Serialized Fields
-
interval
JTextField interval
-
ltsaControl
LtsaControl ltsaControl
-
ltsaParameters
LtsaParameters ltsaParameters
-
sourcePanel
SourcePanel sourcePanel
-
-
-
Class ltsa.LtsaModuleHeader
class LtsaModuleHeader extends ModuleHeader implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
ffthop
int ffthop
-
fftLength
int fftLength
-
intervalSeconds
int intervalSeconds
-
-
Class ltsa.LtsaParameters
class LtsaParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
channelMap
int channelMap
-
dataSource
String dataSource
-
intervalSeconds
int intervalSeconds
Interval for basic measurements. -
longerFactor
int longerFactor
Factor for longer term averages.
-
-
-
Package Map
-
Class Map.DisplayPanZoom
class DisplayPanZoom extends JPanel implements Serializable-
Serialized Fields
-
centreOnShip
JButton centreOnShip
-
down
JButton down
-
downLeft
JButton downLeft
-
downRight
JButton downRight
-
handler
PanZoomBehaviour handler
-
headUp
JButton headUp
-
left
JButton left
-
measureWithMouse
JButton measureWithMouse
-
mouseAdapter
Map.DisplayPanZoom.PanZoomMouseAdapter mouseAdapter
-
northUp
JButton northUp
-
panWithMouse
JButton panWithMouse
-
right
JButton right
-
rotateAntiClockwise
JButton rotateAntiClockwise
-
rotateClockwise
JButton rotateClockwise
-
up
JButton up
-
upLeft
JButton upLeft
-
upRight
JButton upRight
-
zoomIn
JButton zoomIn
-
zoomOut
JButton zoomOut
-
-
-
Class Map.GpsTextDisplay
class GpsTextDisplay extends JPanel implements Serializable-
Serialized Fields
-
course
Map.GpsTextDisplay.GpsTextAreaLabel course
-
cursorBearing
Map.GpsTextDisplay.GpsTextAreaLabel cursorBearing
-
cursorLat
Map.GpsTextDisplay.GpsTextAreaLabel cursorLat
-
cursorLong
Map.GpsTextDisplay.GpsTextAreaLabel cursorLong
-
cursorPanel
Map.GpsTextDisplay.TextAreaPanel cursorPanel
-
cursorRange
Map.GpsTextDisplay.GpsTextAreaLabel cursorRange
-
cursorRangeNmi
Map.GpsTextDisplay.GpsTextAreaLabel cursorRangeNmi
-
cursorReference
Map.GpsTextDisplay.GpsTextAreaLabel cursorReference
-
date
Map.GpsTextDisplay.GpsTextAreaLabel date
-
gpsPanel
Map.GpsTextDisplay.TextAreaPanel gpsPanel
-
heading
Map.GpsTextDisplay.GpsTextAreaLabel heading
-
headingLabel
Map.GpsTextDisplay.GpsTextAreaLabel headingLabel
-
labelColor
Color labelColor
-
lastFixTime
Map.GpsTextDisplay.GpsTextAreaLabel lastFixTime
-
lastFixType
String lastFixType
-
lastMouseLatLong
LatLong lastMouseLatLong
-
latitude
Map.GpsTextDisplay.GpsTextAreaLabel latitude
-
longitude
Map.GpsTextDisplay.GpsTextAreaLabel longitude
-
magneticDeviation
Map.GpsTextDisplay.GpsTextAreaLabel magneticDeviation
-
mapController
MapController mapController
-
mouseX
double mouseX
-
mouseY
double mouseY
-
simpleMap
SimpleMap simpleMap
-
speed
Map.GpsTextDisplay.GpsTextAreaLabel speed
-
time
Map.GpsTextDisplay.GpsTextAreaLabel time
-
-
-
Class Map.MapCommentDialog
class MapCommentDialog extends PamDialog implements Serializable -
Class Map.MapControlSettings
class MapControlSettings extends Object implements Serializable- serialVersionUID:
- 1L
-
Class Map.MapDetectionData
class MapDetectionData extends OverlayDataInfo implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
allAvailable
boolean allAvailable
Plot all available data, regardless of time. -
displayMilliseconds
long displayMilliseconds
-
displaySeconds
long displaySeconds
Plot up to this many seconds back in time from now. -
fade
boolean fade
Fade over time, disappearing at 'displaySeconds' -
lookAhead
boolean lookAhead
Display data ahead of the scrollbar (future data) instead of behind
-
-
Class Map.MapDetectionsDialog
class MapDetectionsDialog extends PamDialog implements Serializable-
Serialized Fields
-
allAvailable
JCheckBox[] allAvailable
-
defaults
JButton[] defaults
-
fades
JCheckBox[] fades
-
lookAhead
JCheckBox[] lookAhead
-
mapDetectionsManager
MapDetectionsManager mapDetectionsManager
-
mapDetectionsParameters
MapDetectionsParameters mapDetectionsParameters
-
options
JButton[] options
-
plotCheckBox
JCheckBox[] plotCheckBox
-
showTimes
JTextField[] showTimes
-
-
-
Class Map.MapDetectionsParameters
class MapDetectionsParameters extends Object implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
mapDetectionDatas
ArrayList<MapDetectionData> mapDetectionDatas
-
-
Class Map.MapPanel
class MapPanel extends JPanelWithPamKey implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
arraygeom
Coordinate3d[] arraygeom
-
arrayPanelOffsets
Coordinate3d[] arrayPanelOffsets
-
arrayPanelPositions
Coordinate3d[] arrayPanelPositions
-
baseDrawing
BufferedImage baseDrawing
-
baseXform
AffineTransform baseXform
-
constantOverlays
ArrayList<PanelOverlayDraw> constantOverlays
-
contourColours
Color[] contourColours
-
contourDepths
int[] contourDepths
-
currentColorScheme
ColourScheme currentColorScheme
-
detectorMenu
JPopupMenu detectorMenu
-
detectorPopupListener
MouseAdapter detectorPopupListener
-
grid
StraightLineGrid grid
-
imageHeight
int imageHeight
-
imageWidth
int imageWidth
-
lastArray
PamArray lastArray
-
lastDrawGpsDataUnit
GpsDataUnit lastDrawGpsDataUnit
-
lastGpsCoodinate
Coordinate3d lastGpsCoodinate
-
lastHeight
int lastHeight
-
lastMapCentreDegrees
LatLong lastMapCentreDegrees
-
lastMapRangeMetres
int lastMapRangeMetres
-
lastMapRotationDegrees
double lastMapRotationDegrees
-
lastWidth
int lastWidth
-
latestEffort
EffortDataUnit latestEffort
-
latestSymbol
PamSymbol latestSymbol
-
mapCentreDegrees
LatLong mapCentreDegrees
-
mapContourGraphics
MapContourGraphics mapContourGraphics
-
mapController
MapController mapController
-
mapRangeMetres
int mapRangeMetres
-
maxCornerLatLong
LatLong maxCornerLatLong
-
measureSymbol
PamSymbol measureSymbol
-
minCornerLatLong
LatLong minCornerLatLong
-
myCompass
Compass myCompass
-
panZoomMenu
JCheckBoxMenuItem panZoomMenu
-
pixelsPerMetre
double pixelsPerMetre
-
plotDetectorMenu
JPopupMenu plotDetectorMenu
-
popupListener
MouseAdapter popupListener
-
rectProj
MapRectProjector rectProj
-
repaintBase
boolean repaintBase
-
ship
Vessel ship
-
showGpsMenu
JCheckBoxMenuItem showGpsMenu
-
showKeyMenu
JCheckBoxMenuItem showKeyMenu
-
simpleMapRef
SimpleMap simpleMapRef
-
trans
TransformUtilities trans
-
wantedContours
boolean[] wantedContours
-
-
Class Map.MapParameters
class MapParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
allow3D
boolean allow3D
Allow 3D rotation using the shift key and mouse movement. -
colourByEffort
boolean colourByEffort
-
colourHydrophonesByChannel
boolean colourHydrophonesByChannel
-
dataKeepTime
int dataKeepTime
How long to keep GPS and other data for, even if it's not being used. -
dataShowTime
int dataShowTime
How long a period to show detector data for. This is generally just used as a default now, with most datablocks having their own time set that they show foe. -
effortDataSource
String effortDataSource
Name of data block providing effort data. -
headingUp
boolean headingUp
-
hideGrid
boolean hideGrid
-
hideShip
boolean hideShip
hide ship. Have to use the negative in order to not mess old configurations. -
hideSurface
boolean hideSurface
hide the sea surface -
keepShipCentred
boolean keepShipCentred
-
keepShipOnMap
boolean keepShipOnMap
-
mapContours
boolean[] mapContours
-
mapFile
File mapFile
-
mapRangeMetres
int mapRangeMetres
Value to store persistently between runs. -
rangeRingDistance
double rangeRingDistance
-
showGpsData
boolean showGpsData
-
showHydrophones
boolean showHydrophones
A flag to enable/disable drawing of the hydrophone array on the map -
showKey
boolean showKey
-
showPanZoom
boolean showPanZoom
-
showRangeRings
int showRangeRings
-
symbolSize
int symbolSize
-
trackShowTime
int trackShowTime
How long to display the ships track for -
viewerShowAll
boolean viewerShowAll
In the viewer, show all loaded detections, rather than just the ons in the showtimes up to the curent cursor position time.
-
-
Class Map.MapParametersDialog
class MapParametersDialog extends PamDialog implements Serializable-
Serialized Fields
-
allow3D
JCheckBox allow3D
-
colourByChannel
JCheckBox colourByChannel
-
colourByEffort
JCheckBox colourByEffort
-
dataKeepTime
JTextField dataKeepTime
-
dataShowTime
JTextField dataShowTime
-
effortSettings
SettingsButton effortSettings
-
effortSourcePanel
EffortSourcePanel effortSourcePanel
-
filePanel
Map.MapParametersDialog.FilePanel filePanel
-
gridDialogPanel
GridDialogPanel gridDialogPanel
-
headingUp
JCheckBox headingUp
-
hydroCheckBox
JCheckBox hydroCheckBox
-
hydrophonePanel
Map.MapParametersDialog.HydrophonePanel hydrophonePanel
-
keepShipCentred
JCheckBox keepShipCentred
-
keepShipOnMap
JCheckBox keepShipOnMap
-
mapFileManager
MapFileManager mapFileManager
-
mapParameters
MapParameters mapParameters
-
ringsRange
JTextField ringsRange
-
ringsType
JComboBox<String> ringsType
-
shipCheckBox
JCheckBox shipCheckBox
-
showGrid
JCheckBox showGrid
-
showSurface
JCheckBox showSurface
-
simpleMap
SimpleMap simpleMap
-
symbolSize
SpinnerNumberModel symbolSize
-
symbolSizeSpinner
JSpinner symbolSizeSpinner
-
trackShowtime
JTextField trackShowtime
-
-
-
Class Map.MouseMeasureDisplay
class MouseMeasureDisplay extends PamBorderPanel implements Serializable-
Serialized Fields
-
bearing
PamLabel bearing
-
border
TitledBorder border
-
latitude
PamLabel latitude
-
longitude
PamLabel longitude
-
mapController
MapController mapController
-
range
PamLabel range
-
rangeNmi
PamLabel rangeNmi
-
simpleMap
SimpleMap simpleMap
-
-
-
Class Map.SimpleMap
class SimpleMap extends JPanel implements Serializable- serialVersionUID:
- 4328052737031247745L
-
Serialized Fields
-
centerOnFirstShipGPS
boolean centerOnFirstShipGPS
-
clipboardCopier
ClipboardCopier clipboardCopier
-
controlContiner
JPanel controlContiner
-
dataBlocks
ArrayList<PamDataBlock> dataBlocks
-
diffCursorPos
Coordinate3d diffCursorPos
-
effortDataBlock
PamDataBlock effortDataBlock
-
externalMouseHandler
ExtMapMouseHandler externalMouseHandler
-
gpsControl
GPSControl gpsControl
-
gpsDataBlock
GPSDataBlock gpsDataBlock
-
gpsTextPanel
GpsTextDisplay gpsTextPanel
-
gridBaseControl
GridbaseControl gridBaseControl
-
hiddenSlider
HiddenSlider hiddenSlider
-
hiddenSliderTime
Integer hiddenSliderTime
-
initialisationComplete
boolean initialisationComplete
-
isMainTab
boolean isMainTab
-
lastClickedMouseLatLong
LatLong lastClickedMouseLatLong
-
mapCanScroll
boolean mapCanScroll
-
mapController
MapController mapController
-
mapDetectionsManager
MapDetectionsManager mapDetectionsManager
-
mapFileManager
MapFileManager mapFileManager
-
mapMarker
Map.SimpleMap.MapOverlayMarker mapMarker
-
mapPanel
MapPanel mapPanel
-
mapParameters
MapParameters mapParameters
-
mousedDataUnit
PamDataUnit mousedDataUnit
-
mouseDownPoint
Point mouseDownPoint
-
mouseDragging
boolean mouseDragging
-
mouseDragPoint
Point mouseDragPoint
-
mouseInput
Map.SimpleMap.MapMouseInputAdapter mouseInput
-
mouseMeasureDisplay
MouseMeasureDisplay mouseMeasureDisplay
-
mouseMotion
Map.SimpleMap.MapMouseMotionAdapter mouseMotion
-
mouseReleased
boolean mouseReleased
-
mouseWheel
Map.SimpleMap.MouseWheelHandler mouseWheel
-
newCursorPos
Coordinate3d newCursorPos
-
oldCursorPos
Coordinate3d oldCursorPos
-
panZoom
DisplayPanZoom panZoom
-
panZoomOnMap
PamZoomOnMapPanel panZoomOnMap
-
shipRotTest
double shipRotTest
-
thisMapIndex
int thisMapIndex
-
viewerControls
JPanel viewerControls
-
viewerScroller
PamScrollSlider viewerScroller
-
viewerShowAll
JRadioButton viewerShowAll
-
viewerShowSelection
JRadioButton viewerShowSelection
-
-
Class Map.Vessel
class Vessel extends PamSymbol implements Serializable- serialVersionUID:
- 6610207880007794175L
-
Serialized Fields
-
centreOfRotation
Coordinate3d centreOfRotation
-
dimA
double dimA
-
dimB
double dimB
-
dimC
double dimC
-
dimD
double dimD
-
gpsReceiverPosition
Coordinate3d gpsReceiverPosition
-
pixelsPerMetre
double pixelsPerMetre
-
predictionArrow
int predictionArrow
-
shipGps
GpsData shipGps
-
shipIconLength
double shipIconLength
-
shipLocation
LatLong shipLocation
-
shipOutline
Coordinate3d[] shipOutline
-
shipPolygon
Coordinate3d[] shipPolygon
-
shipPolygonLatLog
LatLong[] shipPolygonLatLog
-
shipPosition
Coordinate3d shipPosition
-
vesselColor
Color vesselColor
-
vesselLength
double vesselLength
-
vesselLengthWidthRatio
double vesselLengthWidthRatio
-
vesselWidth
double vesselWidth
-
-
-
Package Map.gridbaselayer
-
Class Map.gridbaselayer.GridbaseDialog
class GridbaseDialog extends PamDialog implements Serializable-
Serialized Fields
-
answer
boolean answer
-
gridbaseControl
GridbaseControl gridbaseControl
-
gridDialogPanel
GridDialogPanel gridDialogPanel
-
-
-
Class Map.gridbaselayer.GridbaseParameters
class GridbaseParameters extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
netCDFFile
String netCDFFile
-
-
-
Package mapgrouplocaliser
-
Class mapgrouplocaliser.MapGrouperDialog
class MapGrouperDialog extends PamDialog implements Serializable-
Serialized Fields
-
annotationSelectionPanel
AnnotationsSelectionPanel annotationSelectionPanel
-
mapGroupLocaliserControl
MapGroupLocaliserControl mapGroupLocaliserControl
-
markProvidersPanel
MarkProvidersPanel markProvidersPanel
-
okPressed
boolean okPressed
-
overlayDataManager
MapGroupOverlayManager overlayDataManager
-
overlayPanel
OverlaySwingPanel overlayPanel
-
-
-
Class mapgrouplocaliser.MapGrouperSettings
class MapGrouperSettings extends Object implements Serializable- serialVersionUID:
- 0L
-
Serialized Fields
-
annotationChoices
AnnotationChoices annotationChoices
-
markDataSelectorParams
MarkDataSelectorParams markDataSelectorParams
-
-
-
Package matchedTemplateClassifer
-
Class matchedTemplateClassifer.DefaultTemplates
class DefaultTemplates extends MTClassifier implements Serializable- serialVersionUID:
- 1L
-
Class matchedTemplateClassifer.MatchedTemplateParams
class MatchedTemplateParams extends Object implements Serializable- serialVersionUID:
- 5L
-
Serialized Fields
-
channelClassification
int channelClassification
Integer flag for how to perform channel classification. 0) Require positive identification on all channels individually 1) Only one channel requires classiifciation classification, 2) Use the mean of the channels. -
classifiers
ArrayList<MTClassifier> classifiers
The MT classifiers. Each has two templates; a match template and reject template -
dataSourceIndex
int dataSourceIndex
The index of the data source. -
dataSourceName
String dataSourceName
The source data block -
enableFFTFilter
boolean enableFFTFilter
Enable filtering of data before classificatiom -
fftFilterParams
FFTFilterParams fftFilterParams
The FFT filter params to use. -
lengthdB
double lengthdB
dB drop in waveform for peak search. -
normalisationType
int normalisationType
The normalisation type to use. -
pamSymbol
SymbolData pamSymbol
Symbol data for the classifier. -
peakSearch
boolean peakSearch
True to search for for wave peak and sample around it. -
peakSmoothing
int peakSmoothing
The amount of smoothing to do when searching for a click peak. -
restrictedBins
int restrictedBins
The number of bins to sample around. -
type
byte type
The type to set the click to.
-
-
Class matchedTemplateClassifer.MatchTemplate
class MatchTemplate extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
name
String name
-
sR
float sR
-
waveform
double[] waveform
-
-
Class matchedTemplateClassifer.MTClassifier
class MTClassifier extends Object implements Serializable- serialVersionUID:
- 2L
-
Serialized Fields
-
currentSr
double currentSr
The current sample rates of the waveforms -
inteprWaveformReject
double[] inteprWaveformReject
Copy of the current reject waveform which is at the sampleRate specified byMTClassifier.currentSr
-
interpWaveformMatch
double[] interpWaveformMatch
Copy of the current match waveform which is at the sampleRate specified byMTClassifier.currentSr
-
normalisation
int normalisation
The normalisation -
thresholdToAccept
double thresholdToAccept
Threshold to classify -
waveformMatch
MatchTemplate waveformMatch
The waveform to match -
waveformMatchFFT
ComplexArray waveformMatchFFT
The waveform match FFT -
waveformReject
MatchTemplate waveformReject
The waveform to reject -
waveformRejectFFT
ComplexArray waveformRejectFFT
The waveform match FFT
-
-
-
Package mcc.mccacquisition
-
Class mcc.mccacquisition.MCCDaqParams
class MCCDaqParams extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
boardIndex
int boardIndex
-
differential
boolean differential
-
rangeData
AnalogRangeData rangeData
-
-
-
Package mcc.mccjna
-
Exception Class mcc.mccjna.MCCException
class MCCException extends Exception implements Serializable- serialVersionUID:
- 1L
-
-
Package metadata
-
Class metadata.PamguardMetaData
class PamguardMetaData extends Object implements Serializable- serialVersionUID:
- 1L
-
Serialized Fields
-
deploymentWrapper
NilusSettingsWrapper<nilus.Deployment> deploymentWrapper
-
useAudioForDeploymentTimes
boolean useAudioForDeploymentTimes
-
-
-
Package metadata.swing
-
Class metadata.swing.MetaDataDialog
class MetaDataDialog extends PamDialog implements Serializable-
Serialized Fields
-
deploymentPeriodPanel
DeploymentPeriodPanel deploymentPeriodPanel
-
descriptionPanel
DescriptionTypePanel descriptionPanel
-
pamguardMetaData
PamguardMetaData pamguardMetaData
-
projectInformationPanel
ProjectInformationPanel projectInformationPanel
-
responsiblePanel
ResponsiblePartyPanel responsiblePanel
-
tethysControl
TethysControl tethysControl
-
-
-
-
Package modbustcp
-
Exception Class modbustcp.ModbusTCPException
class ModbusTCPException extends Exception implements Serializable
-
-
Package networkTransfer.emulator
-
Class networkTransfer.emulator.EmulateDialog
class EmulateDialog extends PamDialog implements Serializable-
Serialized Fields
-
buoyNumberModel
SpinnerNumberModel buoyNumberModel
-
circleRadius
JTextField circleRadius
-
dataCheckBoxes
ArrayList<JCheckBox> dataCheckBoxes
-
emulatorParams
EmulatorParams emulatorParams
-
latLong
JLabel latLong
-
nBuoys
JSpinner nBuoys
-
networkEmulator
NetworkEmulator networkEmulator
-
networkObjectPacker
NetworkObjectPacker networkObjectPacker
-
startButton
JButton startButton
-
statusInterval
JTextField statusInterval
-
statusPanel
networkTransfer.emulator.EmulateDialog.StatusPanel statusPanel
-
stopButton
JButton stopButton
-
tableTimer
Timer tableTimer
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usedDataBlocks
ArrayList<PamDataBlock> usedDataBlocks
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Class networkTransfer.emulator.EmulatorParams
class EmulatorParams extends Object implements Serializable- serialVersionUID:
- 1L
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Serialized Fields
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circleRadius
double circleRadius
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firstBuoyId
int firstBuoyId
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gpsCentre
LatLong gpsCentre
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nBuoys
int nBuoys
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statusIntervalSeconds
int statusIntervalSeconds
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usedBlocks
boolean[] usedBlocks
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Package networkTransfer.receive